Miyakogusa Predicted Gene

Lj3g3v0461620.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0461620.1 Non Chatacterized Hit- tr|A2ZTJ0|A2ZTJ0_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,69.74,1e-16,S4,RNA-binding S4 domain;
AA_TRNA_LIGASE_I,Aminoacyl-tRNA synthetase, class I, conserved site;
Nucle,CUFF.40876.1
         (500 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G02660.1 | Symbols: emb2768 | Tyrosyl-tRNA synthetase, class ...   670   0.0  

>AT3G02660.1 | Symbols: emb2768 | Tyrosyl-tRNA synthetase, class Ib,
           bacterial/mitochondrial | chr3:570221-571756 REVERSE
           LENGTH=511
          Length = 511

 Score =  670 bits (1729), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 324/465 (69%), Positives = 376/465 (80%), Gaps = 21/465 (4%)

Query: 39  CTLHSXXXXXXXXXXXNGRSVIGILEERGLLESITSDALRSASS---TAPLRVYCGFDPT 95
           C++HS              +V+ ILEERGLLESITS+ LRSA S    APLRVYCGFDPT
Sbjct: 65  CSIHSTSSPETENQAVFRPNVVDILEERGLLESITSENLRSACSDPKVAPLRVYCGFDPT 124

Query: 96  AESLHLGNLLGIIVLSWFRRCGHNVVALIGGATARVGDPSGKSIERPELDVETLERNTLG 155
           AESLHLGNLLGIIVLSWF+RCGH  V LIGGAT RVGDPSGKS+ERPELD +TLE+N  G
Sbjct: 125 AESLHLGNLLGIIVLSWFQRCGHQAVGLIGGATGRVGDPSGKSLERPELDADTLEKNIAG 184

Query: 156 IGNTIRTILGRAQNLNLEELSVXXXXXXXGNLFDSSVVVLNNYDWWKEFSLLDFLKRVGK 215
           I   I  ILG   +                     S V+ NNYDWWK+ ++LDFL +VG+
Sbjct: 185 ITKIIIKILGSNPSPG------------------GSYVIFNNYDWWKDMTMLDFLNKVGR 226

Query: 216 YARVGSMMAKESVRKRLESEQGMSYTEFTYQLLQGYDFLHLFQNEGVSVQIGGSDQWGNI 275
           +ARVG+MMAKESV+KRLESEQGMSYTEFTYQLLQ YDFLHLF+NEG++VQIGGSDQWGNI
Sbjct: 227 FARVGTMMAKESVKKRLESEQGMSYTEFTYQLLQAYDFLHLFKNEGINVQIGGSDQWGNI 286

Query: 276 TAGTELVRKILQVESAVYGLTFPLLLKSDGTKFGKSEDGAIWLSPVLLSPYKFYQYFFSV 335
           TAGT+L+RKILQ E A YGLTFPLLLK+DGTKFGKSEDGAIWLSP +LSPYKFYQYFFSV
Sbjct: 287 TAGTDLIRKILQAEEAAYGLTFPLLLKNDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSV 346

Query: 336 PDADVVRFLKILTFLDIEEIVKLEEEMVKPGYAPNTAQRRLAEEVTRFVHGEDGLREALR 395
           PD DV+RFLK LTFL ++EI  LE++M KPGY PNTAQ +LAEEVTRFVHGE+GL+EA++
Sbjct: 347 PDVDVIRFLKTLTFLSLDEIKILEDQMSKPGYVPNTAQIKLAEEVTRFVHGEEGLKEAIK 406

Query: 396 ATEALRPGSETKLDWKTIEGIAEDVPSCSLAYDEVLNQSLVDLSVSSGLFDSKSAARRLL 455
           ATEALRPG+ETKLDW  IE IAED+PSCSL  D V   S+VDLSVS+GLF+SKSAARR+L
Sbjct: 407 ATEALRPGAETKLDWNLIERIAEDIPSCSLPIDRVSGLSIVDLSVSAGLFESKSAARRML 466

Query: 456 KQGGLYLNNSRVNSENKKIEVADIVDGKVLLLSAGKKNKVLVRIA 500
           KQGG Y+NN RV+ ENK+++  DIV+G+ L+LSAGKKNKV+VRI+
Sbjct: 467 KQGGFYMNNERVDDENKRVDEEDIVEGRGLVLSAGKKNKVVVRIS 511