Miyakogusa Predicted Gene

Lj3g3v0461580.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0461580.1 Non Chatacterized Hit- tr|I1NIV9|I1NIV9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.36680 PE,82.26,0,domain
present in cyclins, TFIIB and Retinob,Cyclin-like;
Cyclin-like,Cyclin-like; seg,NULL; CYCLIN-,CUFF.40874.1
         (400 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G26430.1 | Symbols: RCY1, ATRCY1 | arginine-rich cyclin 1 | c...   406   e-113
AT2G26430.3 | Symbols: RCY1, ATRCY1 | arginine-rich cyclin 1 | c...   406   e-113
AT2G26430.2 | Symbols: RCY1, ATRCY1 | arginine-rich cyclin 1 | c...   406   e-113
AT4G19600.1 | Symbols: CYCT1;4 | Cyclin family protein | chr4:10...   111   9e-25
AT5G45190.2 | Symbols:  | Cyclin family protein | chr5:18277808-...   107   1e-23
AT5G45190.1 | Symbols:  | Cyclin family protein | chr5:18277808-...   107   1e-23
AT1G35440.1 | Symbols: CYCT1;1 | cyclin T1;1 | chr1:13035294-130...   100   2e-21
AT1G27630.1 | Symbols: CYCT1;3 | cyclin T 1;3 | chr1:9611647-961...    79   6e-15
AT4G19560.1 | Symbols: CYCT1;2 | Cyclin family protein | chr4:10...    69   4e-12
AT5G48640.1 | Symbols:  | Cyclin family protein | chr5:19723653-...    56   3e-08

>AT2G26430.1 | Symbols: RCY1, ATRCY1 | arginine-rich cyclin 1 |
           chr2:11243433-11245504 REVERSE LENGTH=416
          Length = 416

 Score =  406 bits (1043), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 191/242 (78%), Positives = 212/242 (87%), Gaps = 5/242 (2%)

Query: 1   MATGQVLFHRFYCKKSFARFNVKKVAASCVWLASKLEENPKKARQVIIVFHRMECRRENL 60
           MATGQVLF RFYCKKS A+F+VK VAASCVWLASKLEENPKKARQVIIVFHRMECRRENL
Sbjct: 56  MATGQVLFQRFYCKKSLAKFDVKIVAASCVWLASKLEENPKKARQVIIVFHRMECRRENL 115

Query: 61  PMEYLDLYSKKYVDLKMELSRTERHILKEMGFICHVEHPHKFISNYLATLETPPELTQEA 120
           P+E+LD+Y+KK+ +LK+ELSRTERHILKEMGF+CHVEHPHKFISNYLATLETPPEL QEA
Sbjct: 116 PLEHLDMYAKKFSELKVELSRTERHILKEMGFVCHVEHPHKFISNYLATLETPPELRQEA 175

Query: 121 WNLANDSLRTTLCVRFKSEVVACGVIYAAARRFQVPLPENSPWWKAFDADKSGIDEVCRV 180
           WNLANDSLRTTLCVRF+SEVVACGV+YAAARRFQVPLPEN PWWKAFDADKS IDEVCRV
Sbjct: 176 WNLANDSLRTTLCVRFRSEVVACGVVYAAARRFQVPLPENPPWWKAFDADKSSIDEVCRV 235

Query: 181 LAHLYSLPKAEYMSVCKDGD-FTFSNKPLESKSQPTAKDVPQSSSPANTDTSEPKGASGE 239
           LAHLYSLPKA+Y+SVCKDG  FTFS++   S+ Q   KD+     P   +  + K  +G 
Sbjct: 236 LAHLYSLPKAQYISVCKDGKPFTFSSRSGNSQGQSATKDLL----PGAGEAVDTKCTAGS 291

Query: 240 AN 241
           AN
Sbjct: 292 AN 293


>AT2G26430.3 | Symbols: RCY1, ATRCY1 | arginine-rich cyclin 1 |
           chr2:11243433-11245255 REVERSE LENGTH=361
          Length = 361

 Score =  406 bits (1043), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 192/248 (77%), Positives = 214/248 (86%), Gaps = 5/248 (2%)

Query: 1   MATGQVLFHRFYCKKSFARFNVKKVAASCVWLASKLEENPKKARQVIIVFHRMECRRENL 60
           MATGQVLF RFYCKKS A+F+VK VAASCVWLASKLEENPKKARQVIIVFHRMECRRENL
Sbjct: 1   MATGQVLFQRFYCKKSLAKFDVKIVAASCVWLASKLEENPKKARQVIIVFHRMECRRENL 60

Query: 61  PMEYLDLYSKKYVDLKMELSRTERHILKEMGFICHVEHPHKFISNYLATLETPPELTQEA 120
           P+E+LD+Y+KK+ +LK+ELSRTERHILKEMGF+CHVEHPHKFISNYLATLETPPEL QEA
Sbjct: 61  PLEHLDMYAKKFSELKVELSRTERHILKEMGFVCHVEHPHKFISNYLATLETPPELRQEA 120

Query: 121 WNLANDSLRTTLCVRFKSEVVACGVIYAAARRFQVPLPENSPWWKAFDADKSGIDEVCRV 180
           WNLANDSLRTTLCVRF+SEVVACGV+YAAARRFQVPLPEN PWWKAFDADKS IDEVCRV
Sbjct: 121 WNLANDSLRTTLCVRFRSEVVACGVVYAAARRFQVPLPENPPWWKAFDADKSSIDEVCRV 180

Query: 181 LAHLYSLPKAEYMSVCKDGD-FTFSNKPLESKSQPTAKDVPQSSSPANTDTSEPKGASGE 239
           LAHLYSLPKA+Y+SVCKDG  FTFS++   S+ Q   KD+     P   +  + K  +G 
Sbjct: 181 LAHLYSLPKAQYISVCKDGKPFTFSSRSGNSQGQSATKDLL----PGAGEAVDTKCTAGS 236

Query: 240 ANVESIGG 247
           AN +   G
Sbjct: 237 ANNDLKDG 244


>AT2G26430.2 | Symbols: RCY1, ATRCY1 | arginine-rich cyclin 1 |
           chr2:11243433-11245255 REVERSE LENGTH=361
          Length = 361

 Score =  406 bits (1043), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 192/248 (77%), Positives = 214/248 (86%), Gaps = 5/248 (2%)

Query: 1   MATGQVLFHRFYCKKSFARFNVKKVAASCVWLASKLEENPKKARQVIIVFHRMECRRENL 60
           MATGQVLF RFYCKKS A+F+VK VAASCVWLASKLEENPKKARQVIIVFHRMECRRENL
Sbjct: 1   MATGQVLFQRFYCKKSLAKFDVKIVAASCVWLASKLEENPKKARQVIIVFHRMECRRENL 60

Query: 61  PMEYLDLYSKKYVDLKMELSRTERHILKEMGFICHVEHPHKFISNYLATLETPPELTQEA 120
           P+E+LD+Y+KK+ +LK+ELSRTERHILKEMGF+CHVEHPHKFISNYLATLETPPEL QEA
Sbjct: 61  PLEHLDMYAKKFSELKVELSRTERHILKEMGFVCHVEHPHKFISNYLATLETPPELRQEA 120

Query: 121 WNLANDSLRTTLCVRFKSEVVACGVIYAAARRFQVPLPENSPWWKAFDADKSGIDEVCRV 180
           WNLANDSLRTTLCVRF+SEVVACGV+YAAARRFQVPLPEN PWWKAFDADKS IDEVCRV
Sbjct: 121 WNLANDSLRTTLCVRFRSEVVACGVVYAAARRFQVPLPENPPWWKAFDADKSSIDEVCRV 180

Query: 181 LAHLYSLPKAEYMSVCKDGD-FTFSNKPLESKSQPTAKDVPQSSSPANTDTSEPKGASGE 239
           LAHLYSLPKA+Y+SVCKDG  FTFS++   S+ Q   KD+     P   +  + K  +G 
Sbjct: 181 LAHLYSLPKAQYISVCKDGKPFTFSSRSGNSQGQSATKDLL----PGAGEAVDTKCTAGS 236

Query: 240 ANVESIGG 247
           AN +   G
Sbjct: 237 ANNDLKDG 244


>AT4G19600.1 | Symbols: CYCT1;4 | Cyclin family protein |
           chr4:10673619-10676532 FORWARD LENGTH=541
          Length = 541

 Score =  111 bits (278), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 60/189 (31%), Positives = 104/189 (55%), Gaps = 6/189 (3%)

Query: 1   MATGQVLFHRFYCKKSFARFNVKKVAASCVWLASKLEENPKKARQVIIVFHRMECRRENL 60
           +AT  +  HRF+ ++S AR + + +A  C++LA K+EE P+  + VI+V + +  +++  
Sbjct: 81  IATAIIFCHRFFIRQSHARNDRRTIATVCMFLAGKVEETPRPLKDVIVVSYEIIHKKD-- 138

Query: 61  PMEYLDLYSKKYVDLKMELS-RTERHILKEMGFICHVEHPHKFISNYLATLETPPE-LTQ 118
           P     +  K+  + + EL    E+ +L  +GF  +V HP+K +   +   +     L Q
Sbjct: 139 PTTAQKIKQKEVYEQQKELILNGEKIVLSTLGFDFNVYHPYKPLVEAIKKFKVAQNALAQ 198

Query: 119 EAWNLANDSLRTTLCVRFKSEVVACGVIYAAARRFQVPLPENSP--WWKAFDADKSGIDE 176
            AWN  ND LRT+LC++FK   +A G I+ AA+  +V LP +    WW+ FD     +++
Sbjct: 199 VAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLED 258

Query: 177 VCRVLAHLY 185
           V   +  LY
Sbjct: 259 VSNQMLELY 267


>AT5G45190.2 | Symbols:  | Cyclin family protein |
           chr5:18277808-18280733 REVERSE LENGTH=590
          Length = 590

 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 6/189 (3%)

Query: 1   MATGQVLFHRFYCKKSFARFNVKKVAASCVWLASKLEENPKKARQVIIVFHRMECRRENL 60
           +AT  +  HRF+ ++S A+ + + +A  C++LA K+EE P+  + VI V + +  +++  
Sbjct: 92  IATAIIFCHRFFFRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIFVSYEIINKKD-- 149

Query: 61  PMEYLDLYSKKYVDLKMELS-RTERHILKEMGFICHVEHPHKFISNYLATLETPPE-LTQ 118
           P     +  K+  + + EL    E+ +L  +GF  +V HP+K +   +   +     L Q
Sbjct: 150 PGASQKIKQKEVYEQQKELILNGEKIVLSTLGFDLNVYHPYKPLVEAIKKFKVAQNALAQ 209

Query: 119 EAWNLANDSLRTTLCVRFKSEVVACGVIYAAARRFQVPLPENSP--WWKAFDADKSGIDE 176
            AWN  ND LRT+LC++FK   +A G I+ AA+  +V LP +    WW+ FD     +++
Sbjct: 210 VAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLED 269

Query: 177 VCRVLAHLY 185
           V   +  LY
Sbjct: 270 VSNQMLELY 278


>AT5G45190.1 | Symbols:  | Cyclin family protein |
           chr5:18277808-18280733 REVERSE LENGTH=579
          Length = 579

 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 103/189 (54%), Gaps = 6/189 (3%)

Query: 1   MATGQVLFHRFYCKKSFARFNVKKVAASCVWLASKLEENPKKARQVIIVFHRMECRRENL 60
           +AT  +  HRF+ ++S A+ + + +A  C++LA K+EE P+  + VI V + +  +++  
Sbjct: 81  IATAIIFCHRFFFRQSHAKNDRRTIATVCMFLAGKVEETPRPLKDVIFVSYEIINKKD-- 138

Query: 61  PMEYLDLYSKKYVDLKMELS-RTERHILKEMGFICHVEHPHKFISNYLATLETPPE-LTQ 118
           P     +  K+  + + EL    E+ +L  +GF  +V HP+K +   +   +     L Q
Sbjct: 139 PGASQKIKQKEVYEQQKELILNGEKIVLSTLGFDLNVYHPYKPLVEAIKKFKVAQNALAQ 198

Query: 119 EAWNLANDSLRTTLCVRFKSEVVACGVIYAAARRFQVPLPENSP--WWKAFDADKSGIDE 176
            AWN  ND LRT+LC++FK   +A G I+ AA+  +V LP +    WW+ FD     +++
Sbjct: 199 VAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLED 258

Query: 177 VCRVLAHLY 185
           V   +  LY
Sbjct: 259 VSNQMLELY 267


>AT1G35440.1 | Symbols: CYCT1;1 | cyclin T1;1 |
           chr1:13035294-13036037 REVERSE LENGTH=247
          Length = 247

 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/190 (31%), Positives = 100/190 (52%), Gaps = 13/190 (6%)

Query: 1   MATGQVLFHRFYCKKSFARFNVKKVAASCVWLASKLEENPKKARQVIIVFHRMECRRENL 60
           +AT  VL  RF+ ++S  + + K VA  C+++A K+E +P+ A  V+ V +R+   +E L
Sbjct: 55  IATAIVLCQRFFTRQSLTKNDPKTVAIICMFIAGKVEGSPRPAGDVVFVSYRVLFNKEPL 114

Query: 61  PMEYLDLYSKKYVDLKMELSRTERHILKEMGFICHVEHPHKFISNYL---ATLETPPELT 117
                D++ +    LKM +   E+ +L  +     +EHP+K + +++      E    L 
Sbjct: 115 R----DVFER----LKMTVLTGEKLVLSTLECDLEIEHPYKLVMDWVKRSVKTEDGRRLC 166

Query: 118 QEAWNLANDSLRTTLCVRFKSEVVACGVIYAAARRFQVPLP--ENSPWWKAFDADKSGID 175
           Q A+N  NDSLRT+LC++F    +A   IY      ++ LP   +  WW+ FD  K  + 
Sbjct: 167 QAAFNFVNDSLRTSLCLQFGPSQIASAAIYIGLSMCKMTLPCDGDKAWWREFDVTKRQLW 226

Query: 176 EVCRVLAHLY 185
           E+C  +  LY
Sbjct: 227 EICDQMLDLY 236


>AT1G27630.1 | Symbols: CYCT1;3 | cyclin T 1;3 |
           chr1:9611647-9613967 FORWARD LENGTH=317
          Length = 317

 Score = 79.0 bits (193), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 91/186 (48%), Gaps = 7/186 (3%)

Query: 1   MATGQVLFHRFYCKKSFARFNVKKVAASCVWLASKLEENPKKARQVIIVFHRMECRRENL 60
           ++   V+ HRFY ++S A+ + + +A S ++LA K E+ P +   V++  +  E   E  
Sbjct: 82  ISCAMVMCHRFYMRQSHAKNDWQTIATSSLFLACKAEDEPCQLSSVVVASY--EIIYEWD 139

Query: 61  PMEYLDLYSKK-YVDLKMELSRTERHILKEMGFICHVEHPHKFISNYLATLETPPELTQE 119
           P   + ++  + Y + K  +   E  +L    F   +E P+K ++  L  L   P+L   
Sbjct: 140 PSASIRIHQTECYHEFKEIILSGESLLLSTSAFHLDIELPYKPLAAALNRLNAWPDLATA 199

Query: 120 AWNLANDSLRTTLCVRFKSEVVACGVIYAAARRFQVPLPENSPWWKAFDAD----KSGID 175
           AWN  +D +RTTLC+++K  V+A   ++ AA      +     WW  F       K  I 
Sbjct: 200 AWNFVHDWIRTTLCLQYKPHVIATATVHLAATFQNAKVGSRRDWWLEFGVTTKLLKEVIQ 259

Query: 176 EVCRVL 181
           E+C ++
Sbjct: 260 EMCTLI 265


>AT4G19560.1 | Symbols: CYCT1;2 | Cyclin family protein |
           chr4:10661904-10664369 FORWARD LENGTH=460
          Length = 460

 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 114/258 (44%), Gaps = 19/258 (7%)

Query: 1   MATGQVLFHRFYCKKSFARFNVKKVAASCVWLASKLEENPKKARQVIIVFHRMECRRENL 60
           +AT     HRF+ ++S A+ + + +A  C+ LA K+EE P     VII  +    +++  
Sbjct: 79  IATAIFFCHRFFLRQSHAKNDRQTIATVCMLLAGKVEETPVTLEDVIIASYERIHKKDLA 138

Query: 61  PMEYLDLYS--KKYVDLKMELSRTERHILKEMGFICHVEHPHK----FISNYLATLETPP 114
             +  ++Y   K+ V +  EL      +L  + F   + HP+K     I  Y+   +   
Sbjct: 139 GAQRKEVYDQQKELVLIGEEL------VLSTLNFDLCISHPYKPLVEAIKKYMVE-DAKT 191

Query: 115 ELTQEAWNLANDSLRTTLCVRFKSEVVACGVIYAAARRFQVPLPE-NSPWWKAFDADKSG 173
           +L Q AWN  ND LRTTLC++++   +A G I  AA    V L        + FD     
Sbjct: 192 QLAQFAWNFVNDCLRTTLCLQYQPHHIAAGAILLAAELPTVDLQSYREVLCQEFDITPCQ 251

Query: 174 IDEVCRVLAHLYS-LPKAEYMSVCKDGDFTFSNKPLESKSQPTAK----DVPQSSSPANT 228
           ++++   +  LY  +P ++   V   G     ++P+      T K    D+   SS  N 
Sbjct: 252 LEDIRGQILELYERIPTSQESKVESSGGVAVVHQPISRDMASTEKCPSSDIEGGSSQVNL 311

Query: 229 DTSEPKGASGEANVESIG 246
             S+       +  E IG
Sbjct: 312 SQSDDHSVHDGSRSEGIG 329


>AT5G48640.1 | Symbols:  | Cyclin family protein |
           chr5:19723653-19725641 REVERSE LENGTH=253
          Length = 253

 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 73/152 (48%), Gaps = 16/152 (10%)

Query: 1   MATGQVLFHRFYCKKSFARFNVKKVAASCVWLASKLEENPKKARQVIIVFHRMECRRENL 60
           +AT      R Y +KS   F  + VA +C++LASK EE+  +AR ++    R+       
Sbjct: 62  VATAITYMRRVYIRKSMVEFEPRLVALTCLYLASKAEESIVQARNLVFYIKRL------- 114

Query: 61  PMEYLDLYSKKYVDLKMELSRTERHILKEMGFICHVEHPHKFISNYL--ATLETPPELTQ 118
              Y D Y+K   +LK ++   E  +L+ + +   V HP++ +S +L  A L     + Q
Sbjct: 115 ---YPDEYNK--YELK-DILGMEMKVLEALDYYLVVFHPYRSLSEFLQDAAL-NDVNMNQ 167

Query: 119 EAWNLANDSLRTTLCVRFKSEVVACGVIYAAA 150
             W + ND+ +  L +      +A   IY A+
Sbjct: 168 ITWGIVNDTYKMDLILVHPPYRIALACIYIAS 199