Miyakogusa Predicted Gene

Lj3g3v0461420.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0461420.1 NODE_93915_length_1046_cov_28.125238.path1.1
         (279 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G02660.1 | Symbols: emb2768 | Tyrosyl-tRNA synthetase, class ...   462   e-130

>AT3G02660.1 | Symbols: emb2768 | Tyrosyl-tRNA synthetase, class Ib,
           bacterial/mitochondrial | chr3:570221-571756 REVERSE
           LENGTH=511
          Length = 511

 Score =  462 bits (1189), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 217/279 (77%), Positives = 251/279 (89%)

Query: 1   MMAKESVRKRLESEQGMSYTEFTYQLLQGYDFLHLFQNEGVSVQIGGSDQWGNITAGTEL 60
           MMAKESV+KRLESEQGMSYTEFTYQLLQ YDFLHLF+NEG++VQIGGSDQWGNITAGT+L
Sbjct: 233 MMAKESVKKRLESEQGMSYTEFTYQLLQAYDFLHLFKNEGINVQIGGSDQWGNITAGTDL 292

Query: 61  VRKILQVESAVYGLTFPLLLKSDGTKFGKSEDGAIWLSPVLLSPYKFYQYFFSVPDADVV 120
           +RKILQ E A YGLTFPLLLK+DGTKFGKSEDGAIWLSP +LSPYKFYQYFFSVPD DV+
Sbjct: 293 IRKILQAEEAAYGLTFPLLLKNDGTKFGKSEDGAIWLSPSMLSPYKFYQYFFSVPDVDVI 352

Query: 121 RFLKILTFLDIEEIVKLEEEMVKPGYAPNTAQRRLAEEVTRFVHGEDGLREALRATEALR 180
           RFLK LTFL ++EI  LE++M KPGY PNTAQ +LAEEVTRFVHGE+GL+EA++ATEALR
Sbjct: 353 RFLKTLTFLSLDEIKILEDQMSKPGYVPNTAQIKLAEEVTRFVHGEEGLKEAIKATEALR 412

Query: 181 PGSETKLDWKTIEGIAEDVPSCSLAYDEVLNQSLVDLSVSSGLFDSKSAARRLLKQGGLY 240
           PG+ETKLDW  IE IAED+PSCSL  D V   S+VDLSVS+GLF+SKSAARR+LKQGG Y
Sbjct: 413 PGAETKLDWNLIERIAEDIPSCSLPIDRVSGLSIVDLSVSAGLFESKSAARRMLKQGGFY 472

Query: 241 LNNSRVNSENKKIEVADIVDGKVLLLSAGKKNKVLVRIA 279
           +NN RV+ ENK+++  DIV+G+ L+LSAGKKNKV+VRI+
Sbjct: 473 MNNERVDDENKRVDEEDIVEGRGLVLSAGKKNKVVVRIS 511