Miyakogusa Predicted Gene

Lj3g3v0461090.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0461090.1 NODE_69596_length_1218_cov_39.556652.path2.1
         (334 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G08640.1 | Symbols:  | Protein of unknown function (DUF3411) ...   287   9e-78
AT3G08630.1 | Symbols:  | Protein of unknown function (DUF3411) ...   283   9e-77
AT5G12470.1 | Symbols:  | Protein of unknown function (DUF3411) ...    88   1e-17
AT5G22790.1 | Symbols: RER1 | reticulata-related 1 | chr5:759939...    87   2e-17
AT2G37860.3 | Symbols: LCD1 | Protein of unknown function (DUF34...    86   4e-17
AT2G40400.2 | Symbols:  | Protein of unknown function (DUF399 an...    77   1e-14
AT2G40400.1 | Symbols:  | Protein of unknown function (DUF399 an...    77   1e-14
AT3G56140.1 | Symbols:  | Protein of unknown function (DUF399 an...    75   4e-14
AT5G24690.1 | Symbols:  | Protein of unknown function (DUF3411) ...    54   1e-07

>AT3G08640.1 | Symbols:  | Protein of unknown function (DUF3411) |
           chr3:2622992-2624005 FORWARD LENGTH=337
          Length = 337

 Score =  287 bits (734), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 140/229 (61%), Positives = 169/229 (73%), Gaps = 3/229 (1%)

Query: 102 WRSRVSADPQFPFKLLMEELVGVTACVVGDMATRPNFGLNELDFVFSTLVVGSILNFTLM 161
           WRSRV+ADPQFPFK+LMEE+VG++ACV+GDMA+RPNFGLNELDFVFSTLVVGSILNF LM
Sbjct: 108 WRSRVAADPQFPFKVLMEEIVGLSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFVLM 167

Query: 162 YLLAP---TISSASTMPAIFSSCPNSHMFEPGAYSIVERFGTFVYKXXXXXXXXXXXXXX 218
           Y+LAP   T+ S+ T+P IF +CP+SHMFE G+++++ RFGT VYK              
Sbjct: 168 YMLAPTAATLGSSQTLPGIFRNCPSSHMFEQGSFTVMNRFGTLVYKGMVFASVGLAAGLV 227

Query: 219 XXXISNGLILLRKKMDPGFETXXXXXXXXXXALTWAAHMGVSSNLRYQTLNGAEFVLEKS 278
              ISNGLI+LRKKMDP FET          +LTWA HMGVS+N RYQTLNG EF+L K 
Sbjct: 228 GTAISNGLIMLRKKMDPSFETPNKPPPTVLNSLTWATHMGVSANARYQTLNGIEFLLAKV 287

Query: 279 LSPLVFKSSVFGIRLLNNVLGGMTFVMLAKFTGSQKSVGDGDEDPREKD 327
           L PLVFK+SV  +R  NNV GGM+FV+LA+ TGSQ      +   +EKD
Sbjct: 288 LPPLVFKTSVIVLRCANNVAGGMSFVLLARMTGSQSVEEKTEISEKEKD 336


>AT3G08630.1 | Symbols:  | Protein of unknown function (DUF3411) |
           chr3:2620943-2621962 FORWARD LENGTH=339
          Length = 339

 Score =  283 bits (725), Expect = 9e-77,   Method: Compositional matrix adjust.
 Identities = 143/232 (61%), Positives = 171/232 (73%), Gaps = 3/232 (1%)

Query: 102 WRSRVSADPQFPFKLLMEELVGVTACVVGDMATRPNFGLNELDFVFSTLVVGSILNFTLM 161
           WRSRV+AD QFPFK+LME LVGV+A V+GDMA+RPNFGLNELDFVFSTLVVGSILNFTLM
Sbjct: 105 WRSRVAADSQFPFKVLMEMLVGVSANVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLM 164

Query: 162 YLLAPTI---SSASTMPAIFSSCPNSHMFEPGAYSIVERFGTFVYKXXXXXXXXXXXXXX 218
           YLLAP+     S++ +P IF SCP+SHMFE G ++++ RFGT VYK              
Sbjct: 165 YLLAPSAISHGSSNLLPGIFRSCPSSHMFEQGNFTLMNRFGTLVYKGMVFATVGLAAGLV 224

Query: 219 XXXISNGLILLRKKMDPGFETXXXXXXXXXXALTWAAHMGVSSNLRYQTLNGAEFVLEKS 278
              ISNGLI+LRKK+DP FET          +LTWA HMGVS+N+RYQTLNGAEF+LEKS
Sbjct: 225 GTAISNGLIMLRKKIDPSFETPNKPPPTLLNSLTWATHMGVSANVRYQTLNGAEFLLEKS 284

Query: 279 LSPLVFKSSVFGIRLLNNVLGGMTFVMLAKFTGSQKSVGDGDEDPREKDTKE 330
           L PLVFK+SV  +R++NNVLGGM+FV LA+ TGSQ    +   +  E   KE
Sbjct: 285 LPPLVFKTSVIALRVVNNVLGGMSFVTLARMTGSQSVEEEKKIEMSEISEKE 336


>AT5G12470.1 | Symbols:  | Protein of unknown function (DUF3411) |
           chr5:4044950-4047290 REVERSE LENGTH=386
          Length = 386

 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 102/230 (44%), Gaps = 18/230 (7%)

Query: 102 WRSRVSADPQFPFKLLMEELVGVTACVVGDMATRPNFGLNELDFVFSTLVVGSILNFTLM 161
           +R R+ AD  F  KL ME  VG+      +   R     NEL+ VF+ + +  I +F L+
Sbjct: 158 FRERLLADDLFMAKLAMECGVGIFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLV 217

Query: 162 YLLAPTIS-------SASTMPAIFSSCPNSHM---FEPGAYSIVERFGTFVYKXXXXXXX 211
           YL APT+S       +A  +   F +CP++         +Y++++R G            
Sbjct: 218 YLPAPTVSLRPPLALTAGGISKFFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLFAV 277

Query: 212 XXXXXXXXXXISNGLILLRKKMDPGFETXXXXXXXXXXALTWAAHMGVSSNLRYQTLNGA 271
                     I+N  I  RK +D   E           ++ +  +M VSSNLRYQ + G 
Sbjct: 278 GTTSSLVGTAITNAFIKARKAVDQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGV 337

Query: 272 EFVLEKSLSPLVFKSSV------FGIRLLNNVLGGMTFVMLAKFTGSQKS 315
             + ++ L P++ +  +      F +R  N  LG + +V  A+  G QKS
Sbjct: 338 --IEQRLLEPMLHQHKLALSALCFAVRTGNTFLGSLLWVDYARLIGIQKS 385


>AT5G22790.1 | Symbols: RER1 | reticulata-related 1 |
           chr5:7599395-7601573 REVERSE LENGTH=433
          Length = 433

 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/228 (30%), Positives = 105/228 (46%), Gaps = 18/228 (7%)

Query: 103 RSRVSADPQFPFKLLMEELVGVTACVVGDMATRPNFGLNELDFVFSTLVVGSILNFTLMY 162
           R+R+ ADP F FK+  E  +        ++  R     +E +   + L+VG +++  L+ 
Sbjct: 207 RNRMLADPSFLFKVGTEVAIDSCCATFAEVQKRGEDFWSEFELYAADLLVGLVVDVALVG 266

Query: 163 LLAP-------TISSASTMPAIFSSCPN--SHMFE---PGA-YSIVERFGTFVYKXXXXX 209
           LLAP       +++S      +  +C +  S +FE   PG  +S+ +R  TF YK     
Sbjct: 267 LLAPYARIGKPSVASTGLFKDLKRACASLPSSVFEAERPGCKFSVNQRIATFFYKGLLYG 326

Query: 210 XXXXXXXXXXXXISNGLILLRKKMDPGFETXXXXXXXXXXALTWAAHMGVSSNLRYQTLN 269
                       I+N LI+  K+     E           A  W   +G+SSN RYQ +N
Sbjct: 327 SVGFGCGLIGQGIAN-LIMTAKRSVKKSEEDVPIPPLFESAALWGVFLGLSSNARYQIIN 385

Query: 270 GAEFVLEKSLS----PLVFKSSVFGIRLLNNVLGGMTFVMLAKFTGSQ 313
           G E V+E S +    P+V  +   G+R  NNV GGM FV  AK +G Q
Sbjct: 386 GLERVVEGSTAAKRIPVVAMAFTVGVRFANNVYGGMQFVDWAKLSGVQ 433


>AT2G37860.3 | Symbols: LCD1 | Protein of unknown function (DUF3411)
           | chr2:15856952-15858793 FORWARD LENGTH=432
          Length = 432

 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 108/229 (47%), Gaps = 21/229 (9%)

Query: 103 RSRVSADPQFPFKLLMEELVGVTACVVGDMATRPNFGLNELDFVFSTLVVGSILNFTLMY 162
           R+R+ ADP F FK+  E ++      V ++  R      E +   + L+VG+++N  L+ 
Sbjct: 207 RNRMLADPSFLFKIGAEIVIDSCCATVAEVQKRGKDFWAEFELYVADLLVGTVVNIALVG 266

Query: 163 LLAPTIS----SAS-----TMPAIFSSCPNSHMFE---PGA-YSIVERFGTFVYKXXXXX 209
           +LAP +     SAS      M   +++ P+S +FE   PG  +S  +R  T+ YK     
Sbjct: 267 MLAPYVRFGQPSASPGFLGRMVFAYNALPSS-VFEAERPGCRFSAQQRLATYFYKGIMYG 325

Query: 210 XXXXXXXXXXXXISNGLILLRKKMDPGFETXXXXXXXXXXALTWAAHMGVSSNLRYQTLN 269
                       I+N ++  ++ ++   E           AL W   + VSSN RYQ +N
Sbjct: 326 AVGFGCGIVGQGIANLIMTAKRNINKSEENIPVPPLIKSAAL-WGVFLSVSSNTRYQIIN 384

Query: 270 GAEFVLE-----KSLSPLVFKSSVFGIRLLNNVLGGMTFVMLAKFTGSQ 313
           G E V+E     K   P     +V G+RL NN+ GGM FV  A+ +G Q
Sbjct: 385 GLERVVEASPFAKKFPPAAMAFTV-GVRLANNIYGGMQFVDWARLSGCQ 432


>AT2G40400.2 | Symbols:  | Protein of unknown function (DUF399 and
           DUF3411) | chr2:16869363-16872569 FORWARD LENGTH=735
          Length = 735

 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 24/245 (9%)

Query: 102 WRSRVSADPQFPFKLLMEELVGVTACVVGDMATRPNFGLNELDFVFSTLVVGSILNFTLM 161
           +R R+ ADP+F  +L +EE + +T  +V     R      ELD+V +  V  S+++F  +
Sbjct: 468 FRERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTV 527

Query: 162 YLLAPTIS------------SASTMPAIFSSCPNSHMFEPG----AYSIVERFGTFVYKX 205
           +L APT+S            S   +  +  S P+ + F+       +++  R  + +   
Sbjct: 528 WLPAPTLSFISYADETIGPNSIDALRGLLGSIPD-NAFQKSLGGQEWTLSLRIASVIIGG 586

Query: 206 XXXXXXXXXXXXXXXXISNGLILLRKKMDP--GFETXXXXXXXXXXALTWAAHMGVSSNL 263
                            SN L  +RK + P  G             AL +  ++G SSN+
Sbjct: 587 LKLAGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKTALVYGGYLGTSSNI 646

Query: 264 RYQTLNG-AEFVLEKSLS--PLVFKSSVFGIRLLNNVLGGMTFVMLAKFTG--SQKSVGD 318
           RYQ + G  E  +   LS  PL+     F +R+ N+  G   ++ LA+ TG  +QKSV  
Sbjct: 647 RYQIIAGLIEHRISDELSSQPLLVNMISFVVRVANSYFGTQQWIDLARSTGLQTQKSVTT 706

Query: 319 GDEDP 323
            ++ P
Sbjct: 707 SNQIP 711


>AT2G40400.1 | Symbols:  | Protein of unknown function (DUF399 and
           DUF3411) | chr2:16869363-16872569 FORWARD LENGTH=735
          Length = 735

 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 108/245 (44%), Gaps = 24/245 (9%)

Query: 102 WRSRVSADPQFPFKLLMEELVGVTACVVGDMATRPNFGLNELDFVFSTLVVGSILNFTLM 161
           +R R+ ADP+F  +L +EE + +T  +V     R      ELD+V +  V  S+++F  +
Sbjct: 468 FRERLLADPKFLNRLAIEEAISITTTLVAQYEKRKENFFEELDYVITDSVRASVVDFFTV 527

Query: 162 YLLAPTIS------------SASTMPAIFSSCPNSHMFEPG----AYSIVERFGTFVYKX 205
           +L APT+S            S   +  +  S P+ + F+       +++  R  + +   
Sbjct: 528 WLPAPTLSFISYADETIGPNSIDALRGLLGSIPD-NAFQKSLGGQEWTLSLRIASVIIGG 586

Query: 206 XXXXXXXXXXXXXXXXISNGLILLRKKMDP--GFETXXXXXXXXXXALTWAAHMGVSSNL 263
                            SN L  +RK + P  G             AL +  ++G SSN+
Sbjct: 587 LKLAGVGVVSSFAAVGSSNALYAIRKFIKPELGVGEQAKRSPMLKTALVYGGYLGTSSNI 646

Query: 264 RYQTLNG-AEFVLEKSLS--PLVFKSSVFGIRLLNNVLGGMTFVMLAKFTG--SQKSVGD 318
           RYQ + G  E  +   LS  PL+     F +R+ N+  G   ++ LA+ TG  +QKSV  
Sbjct: 647 RYQIIAGLIEHRISDELSSQPLLVNMISFVVRVANSYFGTQQWIDLARSTGLQTQKSVTT 706

Query: 319 GDEDP 323
            ++ P
Sbjct: 707 SNQIP 711


>AT3G56140.1 | Symbols:  | Protein of unknown function (DUF399 and
           DUF3411) | chr3:20829407-20832669 FORWARD LENGTH=745
          Length = 745

 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/237 (25%), Positives = 105/237 (44%), Gaps = 22/237 (9%)

Query: 102 WRSRVSADPQFPFKLLMEELVGVTACVVGDMATRPNFGLNELDFVFSTLVVGSILNFTLM 161
           +R R+ ADP+F  +L +EE + +T  ++     R      E+D+V +  V GS+++F  +
Sbjct: 477 FRERLLADPKFLNRLAIEEAISITTTLIAQYEKRKENFFEEIDYVITDTVRGSVVDFFTV 536

Query: 162 YLLAPTIS------------SASTMPAIFSSCPNSHMFEPGA---YSIVERFGTFVYKXX 206
           +L APT+S            S   +  +  S P++   +  A   +++  R  + +    
Sbjct: 537 WLPAPTLSFLSYADETTGPDSIDALRGLLGSIPDNAFQKSLAGREWNLNLRIASVIVGGL 596

Query: 207 XXXXXXXXXXXXXXXISNGLILLRKKMDPGFETXXXXXXX--XXXALTWAAHMGVSSNLR 264
                           SN L + RK + P                A+ +   +G S+NLR
Sbjct: 597 KLAGVGVVSSFAAVGASNALNIARKVIKPELVVAEKPKRSPLLKTAMVYGGFLGTSANLR 656

Query: 265 YQTLNG-AEFVLEKSLS--PLVFKSSVFGIRLLNNVLGGMTFVMLAKFTG--SQKSV 316
           YQ + G  E  L   LS  PL+  +  F +R LN+  G   ++ LA+ TG  +QKS+
Sbjct: 657 YQIIAGLIEHRLSDELSSQPLLVNAISFVVRTLNSYFGTQQWIDLARSTGLQTQKSI 713


>AT5G24690.1 | Symbols:  | Protein of unknown function (DUF3411) |
           chr5:8455783-8458513 REVERSE LENGTH=521
          Length = 521

 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 73/176 (41%), Gaps = 14/176 (7%)

Query: 105 RVSADPQFPFKLLMEELVGVTACVVGDMATRPNFGLNELDFVFSTLVVGSILNFTLMYLL 164
           R+ ADP F +KLL+E+   V   V  ++  R N    E D     ++  S  N   ++LL
Sbjct: 240 RMLADPAFLYKLLLEQAATVGCSVWWEVKNRKNRLKEEWDLALINVLTVSACNAAAVWLL 299

Query: 165 APTISSAST----MPAIFSSCPNSHMFEPG----AYSIVERFGTFVYKXXXXXXXXXXXX 216
           AP  S  +T    +       PN ++FE       + + +RF +  YK            
Sbjct: 300 APCRSYGNTFRFDLQNTLQKLPN-NLFEMSYPLREFDLQKRFHSLFYKAAELSILGLAAG 358

Query: 217 XXXXXISNGLILLRKKMDPGFETXXXXXXXXXXALTWAAHMGVSSNLRYQTLNGAE 272
                +SN  +L  KK +               AL + A +G+ +NLRYQ L G E
Sbjct: 359 TLQGSLSN--VLAGKKKN---RVSVTVPSISTNALGYGAFLGIYANLRYQLLCGFE 409