Miyakogusa Predicted Gene

Lj3g3v0428820.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0428820.1 Non Chatacterized Hit- tr|I1LSW3|I1LSW3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55833
PE,91.35,0,RmlC-like cupins,RmlC-like cupin domain; HgmA,Homogentisate
1,2-dioxygenase; HOMOGENTISATE 1,2-DIOXY,CUFF.40726.1
         (278 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G54080.2 | Symbols: HGO | homogentisate 1,2-dioxygenase | chr...   468   e-132
AT5G54080.1 | Symbols: HGO | homogentisate 1,2-dioxygenase | chr...   468   e-132

>AT5G54080.2 | Symbols: HGO | homogentisate 1,2-dioxygenase |
           chr5:21945920-21948070 FORWARD LENGTH=461
          Length = 461

 Score =  468 bits (1205), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 218/255 (85%), Positives = 232/255 (90%)

Query: 1   MLPQGFRFTVDLPDGPSRGYVAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEDKSY 60
           ++PQGFRF++DLPDG SRGYVAEI+G HFQLPDLGPIGANGLAA RDFL PTAWFED   
Sbjct: 187 VIPQGFRFSIDLPDGKSRGYVAEIYGAHFQLPDLGPIGANGLAASRDFLAPTAWFEDGLR 246

Query: 61  PGYTIVQKFGGELFSAVQDFSPFNVVAWRGNYVPYKYDLSKFCPYNTVLFDHSDPSINTV 120
           P YTIVQKFGGELF+A QDFSPFNVVAW GNYVPYKYDL KFCPYNTVL DH DPSINTV
Sbjct: 247 PEYTIVQKFGGELFTAKQDFSPFNVVAWHGNYVPYKYDLKKFCPYNTVLLDHGDPSINTV 306

Query: 121 LTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHGGYEAKVDGFLPG 180
           LTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLI+G YEAK DGFLPG
Sbjct: 307 LTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIYGAYEAKADGFLPG 366

Query: 181 GASLHSCMTPHGPDTKSYEATIARGNDVGPNKITDTMAFMFESCLIPRISRWALESPFLD 240
           GASLHSCMTPHGPDT +YEATIAR N + P+K+T TMAFMFES LIPR+  WALESPFLD
Sbjct: 367 GASLHSCMTPHGPDTTTYEATIARVNAMAPSKLTGTMAFMFESALIPRVCHWALESPFLD 426

Query: 241 HDYYQCWIGLRSHFN 255
           HDYYQCWIGL+SHF+
Sbjct: 427 HDYYQCWIGLKSHFS 441


>AT5G54080.1 | Symbols: HGO | homogentisate 1,2-dioxygenase |
           chr5:21945920-21948070 FORWARD LENGTH=461
          Length = 461

 Score =  468 bits (1205), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 218/255 (85%), Positives = 232/255 (90%)

Query: 1   MLPQGFRFTVDLPDGPSRGYVAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEDKSY 60
           ++PQGFRF++DLPDG SRGYVAEI+G HFQLPDLGPIGANGLAA RDFL PTAWFED   
Sbjct: 187 VIPQGFRFSIDLPDGKSRGYVAEIYGAHFQLPDLGPIGANGLAASRDFLAPTAWFEDGLR 246

Query: 61  PGYTIVQKFGGELFSAVQDFSPFNVVAWRGNYVPYKYDLSKFCPYNTVLFDHSDPSINTV 120
           P YTIVQKFGGELF+A QDFSPFNVVAW GNYVPYKYDL KFCPYNTVL DH DPSINTV
Sbjct: 247 PEYTIVQKFGGELFTAKQDFSPFNVVAWHGNYVPYKYDLKKFCPYNTVLLDHGDPSINTV 306

Query: 121 LTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHGGYEAKVDGFLPG 180
           LTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLI+G YEAK DGFLPG
Sbjct: 307 LTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIYGAYEAKADGFLPG 366

Query: 181 GASLHSCMTPHGPDTKSYEATIARGNDVGPNKITDTMAFMFESCLIPRISRWALESPFLD 240
           GASLHSCMTPHGPDT +YEATIAR N + P+K+T TMAFMFES LIPR+  WALESPFLD
Sbjct: 367 GASLHSCMTPHGPDTTTYEATIARVNAMAPSKLTGTMAFMFESALIPRVCHWALESPFLD 426

Query: 241 HDYYQCWIGLRSHFN 255
           HDYYQCWIGL+SHF+
Sbjct: 427 HDYYQCWIGLKSHFS 441