Miyakogusa Predicted Gene

Lj3g3v0427290.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0427290.2 tr|G5AQS9|G5AQS9_HETGA Rab3 GTPase-activating
protein non-catalytic subunit OS=Heterocephalus
glaber,31.08,3e-18,RAB3-GAP REGULATORY DOMAIN,Rab3-GAP regulatory
subunit,CUFF.40694.2
         (344 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G14910.1 | Symbols:  | unknown protein; Has 158 Blast hits to...   530   e-151

>AT3G14910.1 | Symbols:  | unknown protein; Has 158 Blast hits to
           158 proteins in 77 species: Archae - 0; Bacteria - 0;
           Metazoa - 104; Fungi - 0; Plants - 33; Viruses - 0;
           Other Eukaryotes - 21 (source: NCBI BLink). |
           chr3:5015432-5017566 FORWARD LENGTH=455
          Length = 455

 Score =  530 bits (1365), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 251/343 (73%), Positives = 294/343 (85%), Gaps = 5/343 (1%)

Query: 1   MIYPGRVLKLRVRGTKKDLIQDSSSEEFCLIMPGVIARFDSSDIQNMLQKWFEESQSQLW 60
           +++  R+LK+RVRGTKKDL+Q++SSEE C+++PGVIARFD S+IQ+M+QKW +E  S  W
Sbjct: 116 IVHQSRILKIRVRGTKKDLMQETSSEEICIVLPGVIARFDGSNIQSMVQKWVQEKNSNFW 175

Query: 61  NQKPKREDSEDFEHSHVKLPYQVWNVGKYGTCADAAITGIMPPPLMEQQSSQRYYCAVAV 120
           +QK ++ D+ED    + +LPYQ+WNV K G C DA +TG+MPPPL+E QSSQRYYCAV +
Sbjct: 176 DQKNRKGDAEDTGSLYQRLPYQIWNVNKNGVCVDATVTGVMPPPLLELQSSQRYYCAVTI 235

Query: 121 GEDAVISAYRLSEDKGRSLVGAILSKVVPAAFSTVASFSKLIWRSEPASPKKSPRKSDQK 180
           GED+VISAYRLSED+GRSLVGAILSKVVPAA ST+ASFSKLIWRS   SPK+ P   + K
Sbjct: 236 GEDSVISAYRLSEDRGRSLVGAILSKVVPAAASTIASFSKLIWRSNDQSPKRKP---EAK 292

Query: 181 PQPFARASPLTCLKDHPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRD 240
            Q FARAS LTC+KD+PRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRD
Sbjct: 293 TQSFARASSLTCIKDYPRKGEKLTLSPSGTLAAITDSLGRILLLDTQALVVVRLWKGYRD 352

Query: 241 ASCLFMEMLVNKDTASSSSTYYEPMKSDYCLCLAIHAPRKGIIEIWQMRTGPRLRTIPCA 300
           ASC+FMEML  KD    S  + EP+KSDYCLCLAIHAPRKGIIE+WQMRTGPRL TI CA
Sbjct: 353 ASCVFMEMLAKKDKG-KSVIHTEPVKSDYCLCLAIHAPRKGIIEVWQMRTGPRLLTIQCA 411

Query: 301 KGSKMLQPTYRFGA-SISSPYVPLEVFLLNGDSGQISVLNRTL 342
           KGSK+LQP YRFG+ S SSPY+PLEVFLLNGDSGQ+S+LNR+L
Sbjct: 412 KGSKLLQPAYRFGSNSSSSPYIPLEVFLLNGDSGQVSMLNRSL 454