Miyakogusa Predicted Gene
- Lj3g3v0426270.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0426270.1 Non Chatacterized Hit- tr|D8QS06|D8QS06_SELML
Putative uncharacterized protein OS=Selaginella
moelle,27.88,1e-18,PPR,Pentatricopeptide repeat; TPR-like,NULL; PPR:
pentatricopeptide repeat domain,Pentatricopeptide ,CUFF.40688.1
(458 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 443 e-124
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 3e-47
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 6e-46
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 7e-46
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 4e-45
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 179 4e-45
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 179 5e-45
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 177 1e-44
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 1e-43
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 2e-43
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 169 4e-42
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 169 5e-42
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 2e-41
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 166 2e-41
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 5e-41
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 3e-40
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 4e-40
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 161 9e-40
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 161 9e-40
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 6e-39
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 157 1e-38
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 4e-38
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 155 5e-38
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 8e-38
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 8e-38
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 8e-38
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 154 9e-38
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 4e-37
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 152 4e-37
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 4e-37
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 4e-37
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 4e-37
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 152 5e-37
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 7e-37
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 3e-36
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 4e-36
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 149 5e-36
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 7e-36
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 148 7e-36
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 7e-36
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 8e-36
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 147 2e-35
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 2e-35
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 2e-35
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 2e-35
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 3e-35
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 146 3e-35
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 145 7e-35
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 144 1e-34
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 144 1e-34
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 144 1e-34
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 1e-34
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 3e-34
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 4e-34
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 5e-34
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 5e-34
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 8e-34
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 1e-33
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 1e-33
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 138 6e-33
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 7e-33
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 3e-32
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 3e-32
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 3e-32
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 3e-32
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 6e-32
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 9e-32
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 134 1e-31
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 134 2e-31
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 133 3e-31
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 4e-31
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 9e-31
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 131 1e-30
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 131 1e-30
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 3e-30
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 1e-29
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 1e-29
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 126 3e-29
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 126 3e-29
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 126 3e-29
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 7e-29
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 7e-29
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 2e-28
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 2e-28
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 6e-28
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 6e-28
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 9e-28
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 1e-27
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 120 2e-27
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 3e-27
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 4e-27
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 119 5e-27
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 7e-27
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 9e-27
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 1e-26
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 1e-26
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 116 3e-26
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 116 4e-26
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 5e-26
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 1e-25
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 1e-25
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 114 2e-25
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 3e-25
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 110 2e-24
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 107 2e-23
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 7e-23
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 105 7e-23
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 7e-23
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 9e-23
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 104 1e-22
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 103 2e-22
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 2e-22
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 6e-22
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 102 7e-22
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 100 2e-21
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 2e-21
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 100 4e-21
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 99 4e-21
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 7e-21
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 9e-21
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 98 1e-20
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 1e-19
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 3e-19
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 91 2e-18
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 5e-18
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 4e-17
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 6e-17
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 84 2e-16
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 5e-16
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 82 6e-16
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 82 7e-16
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 8e-16
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 9e-16
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 81 2e-15
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 3e-15
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 1e-14
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 78 2e-14
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 7e-14
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 8e-14
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 75 1e-13
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 74 2e-13
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 2e-13
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 71 2e-12
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 71 2e-12
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 2e-12
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 70 3e-12
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 70 3e-12
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 69 5e-12
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 7e-12
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 69 9e-12
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 68 1e-11
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 68 1e-11
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 67 2e-11
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 67 2e-11
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 67 3e-11
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 5e-11
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 7e-11
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 3e-10
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 63 3e-10
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 63 4e-10
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 63 4e-10
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 4e-10
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 62 6e-10
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 62 6e-10
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 6e-10
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 9e-10
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 1e-09
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 61 1e-09
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 61 2e-09
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 61 2e-09
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 60 5e-09
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 59 5e-09
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 5e-09
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 59 7e-09
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 9e-09
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 58 1e-08
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 58 1e-08
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 57 3e-08
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 4e-08
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 5e-08
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 5e-08
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT4G35850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 8e-08
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 55 9e-08
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 55 9e-08
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 2e-07
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 53 3e-07
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 52 8e-07
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 52 9e-07
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 51 1e-06
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 51 1e-06
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 50 2e-06
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G02370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 50 3e-06
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 4e-06
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 5e-06
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 443 bits (1139), Expect = e-124, Method: Compositional matrix adjust.
Identities = 224/456 (49%), Positives = 311/456 (68%), Gaps = 5/456 (1%)
Query: 1 MATPKPISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNH--RPFRHSLLSYDLIITKLGRA 58
M+ K +S FRL+SLLR + DPS A +LF NP+P++ + RPFR+SLL YD+IITKLG +
Sbjct: 1 MSAVKSVSSFRLASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGS 60
Query: 59 KMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKS 118
KM E++QVL L DTR E + C+VI F+ R + PSRA+ F +P +RCQRT+KS
Sbjct: 61 KMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKS 120
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRS 178
N+LL ALL C + + + E + EFG PDACTYNILI G D A +LFDEM
Sbjct: 121 LNSLLSALLKCGELEKMKERLSSIDEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVK 180
Query: 179 RGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELS 238
+ V+P TFGTLIH LC++SR++EA ++K +M + + + V IY +LIK +C+IGELS
Sbjct: 181 KKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELS 240
Query: 239 WAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMI 298
+AF++KDE + +K+DAA+Y+TLI++L KAG+ E +LEEM E GC+ ++VT NV+I
Sbjct: 241 FAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLI 300
Query: 299 GEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCA 356
+C EN+ E A R+LD + +G+KPDVI YN+ LG + KW EA LF DMPRRGC+
Sbjct: 301 NGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCS 360
Query: 357 PDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTV 416
PD ++YR +FDGLC QF EA V+LDEM+FKGY P L F+ +LC+ G E+LS V
Sbjct: 361 PDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKV 420
Query: 417 LSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+S L +G + +W V++ +CK + +S +LL
Sbjct: 421 ISSL-HRGIAGDADVWSVMIPTMCKEPVISDSIDLL 455
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 186 bits (472), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 128/458 (27%), Positives = 223/458 (48%), Gaps = 10/458 (2%)
Query: 5 KPISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEM 64
K IS SL++ ++DP +F N + + F H+ +Y +++ L R K +
Sbjct: 52 KFISHESAVSLMKRERDPQGVLDIF---NKASQQKGFNHNNATYSVLLDNLVRHKKFLAV 108
Query: 65 EQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSF-RCQRTLKSFNTLL 123
+ +LHQ+ +T R E L +++ ++R+ + ++ F I R + +L + +T L
Sbjct: 109 DAILHQMKYET-CRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCL 167
Query: 124 HALLTCRQFDAVTELAARAGE-FG-APDACTYNILIRASCLRGHADRAFELFDEMRSRGV 181
+ L+ + + +L A G P+ C +NIL++ C G + AF + +EM+ G+
Sbjct: 168 NLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGI 227
Query: 182 R-PDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWA 240
P+ T+ TL+ L +SR +EA EL E+M + + + +I G C+ GE+ A
Sbjct: 228 SYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERA 287
Query: 241 FRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGE 300
+I D M K G + Y+ L+N K GK +EA + +E+++ G + ++V ++
Sbjct: 288 KKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNC 347
Query: 301 YCRENNFEEAYRILDGVEG--VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPD 358
+CR +EA ++L ++ + D + YNV L L EG+ EA+ + G +
Sbjct: 348 FCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLN 407
Query: 359 VVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLS 418
+YR + + LC + +AV L M +G P N V LC+ G E+ VL
Sbjct: 408 KGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLI 467
Query: 419 DLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
G I W V+ +CK K+ FELLD+LV
Sbjct: 468 GFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLV 505
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 182 bits (461), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 170/317 (53%), Gaps = 10/317 (3%)
Query: 143 GEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLR 202
G PD TYN++I C G + A + D M V PD T+ T++ LC++ +L+
Sbjct: 165 GSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLK 221
Query: 203 EAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTL 262
+A E+ + M + +T YT LI+ C+ + A ++ DEM +G D YN L
Sbjct: 222 QAMEVLDRMLQRDCYPDVIT-YTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 263 INALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGV 320
+N + K G+ +EA++ L +M GC+ N +T N+++ C + +A ++L + +G
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 321 KPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVV 380
P V+ +N+ + +LC++G A+D+ MP+ GC P+ ++Y L G C+ ++ A+
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIE 400
Query: 381 VLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGI--WDVVLSM 438
L+ M+ +G P N ++ LC++G E +L+ L+SKG C+ + ++ V+
Sbjct: 401 YLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG--CSPVLITYNTVIDG 458
Query: 439 VCKPEKVPESFELLDAL 455
+ K K ++ +LLD +
Sbjct: 459 LAKAGKTGKAIKLLDEM 475
Score = 171 bits (433), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 108/406 (26%), Positives = 201/406 (49%), Gaps = 19/406 (4%)
Query: 54 KLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHV-ITFYARARQPSRAVQTFLSIPSFRC 112
+LG+ + ++ ++L + VP+ + +V I+ Y +A + + A+ +
Sbjct: 149 RLGKTRKAAKILEIL-----EGSGAVPDVITYNVMISGYCKAGEINNALSV---LDRMSV 200
Query: 113 QRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFE 171
+ ++NT+L +L + E+ R + PD TY ILI A+C A +
Sbjct: 201 SPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMK 260
Query: 172 LFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC---VTIYTNLI 228
L DEMR RG PD T+ L++ +C+ RL EA + +M GC V + ++
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM----PSSGCQPNVITHNIIL 316
Query: 229 KGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCE 288
+ +C G A ++ +M++KG +N LIN L + G A+ +LE+M + GC+
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 289 WNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDL 346
NS++ N ++ +C+E + A L+ + G PD++ YN L LCK+GK +A+++
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 347 FHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQ 406
+ + +GC+P ++TY T+ DGL + + +A+ +LDEM K P + ++ V L +
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 407 EGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
EG + + G N ++ ++ +CK + + + L
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 154/310 (49%), Gaps = 6/310 (1%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD LIR C G +A ++ + + G PD T+ +I C+ + A +
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+ M + V Y +++ +C G+L A + D M+++ D Y LI A
Sbjct: 195 LDRM----SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATC 250
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVI 325
+ A+++L+EMR+ GC + VT NV++ C+E +EA + L+ + G +P+VI
Sbjct: 251 RDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVI 310
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
+N+ L +C G+W +A L DM R+G +P VVT+ L + LCR A+ +L++M
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKV 445
G P S + N + C+E + L + S+G + ++ +L+ +CK KV
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430
Query: 446 PESFELLDAL 455
++ E+L+ L
Sbjct: 431 EDAVEILNQL 440
Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 151/295 (51%), Gaps = 6/295 (2%)
Query: 164 GHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTI 223
G + F+ + M G PD TLI C + R+A ++ E + + +T
Sbjct: 116 GELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT- 174
Query: 224 YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMR 283
Y +I G CK GE++ A + D M + D YNT++ +L +GK ++A+ VL+ M
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRML 231
Query: 284 EGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWS 341
+ C + +T ++I CR++ A ++LD + G PDV+ YNV + +CKEG+
Sbjct: 232 QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLD 291
Query: 342 EAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFV 401
EA+ +DMP GC P+V+T+ + +C ++ +A +L +M+ KG++P N +
Sbjct: 292 EAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILI 351
Query: 402 SELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ LC++G +L + G N ++ +L CK +K+ + E L+ +V
Sbjct: 352 NFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 184/388 (47%), Gaps = 15/388 (3%)
Query: 45 LLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPS--RAVQ 102
+++Y+ I+ L + L + +VL ++ R P+ ++ + I A R A++
Sbjct: 204 VVTYNTILRSLCDSGKLKQAMEVLDRML--QRDCYPD-VITYTILIEATCRDSGVGHAMK 260
Query: 103 TFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASC 161
+ C + ++N L++ + + D + G P+ T+NI++R+ C
Sbjct: 261 LLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMC 320
Query: 162 LRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC- 220
G A +L +M +G P TF LI+ LC L A ++ E+M + GC
Sbjct: 321 STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH----GCQ 376
Query: 221 --VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
Y L+ G CK ++ A + MV +G D YNT++ AL K GK E+A+ +
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 279 LEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VKPDVIGYNVFLGWLCK 336
L ++ GC +T N +I + +A ++LD + +KPD I Y+ +G L +
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 337 EGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN 396
EGK EA+ FH+ R G P+ VT+ ++ GLC+ RQ A+ L M+ +G P +
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETS 556
Query: 397 LNAFVSELCQEGNFELLSTVLSDLTSKG 424
+ L EG + +L++L +KG
Sbjct: 557 YTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 113/228 (49%), Gaps = 1/228 (0%)
Query: 225 TNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMRE 284
N ++ + + GEL F+ + MV G D TLI + GK +A ++LE +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 285 GGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAM 344
G + +T NVMI YC+ A +LD + V PDV+ YN L LC GK +AM
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMS-VSPDVVTYNTILRSLCDSGKLKQAM 224
Query: 345 DLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSEL 404
++ M +R C PDV+TY L + CR A+ +LDEM +G P N V+ +
Sbjct: 225 EVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGI 284
Query: 405 CQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
C+EG + L+D+ S G N +++L +C + ++ +LL
Sbjct: 285 CKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 108/253 (42%), Gaps = 44/253 (17%)
Query: 39 RPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCH--VITFYARARQ 96
+ F S+++++++I L R +L +L ++ +H L + ++ + + ++
Sbjct: 338 KGFSPSVVTFNILINFLCRKGLLGRAIDILEKM---PQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 97 PSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQF---DAVTELAARAGEFGAPDACTY 153
RA++ + S C + ++NT+L AL C+ DAV L + + +P TY
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTAL--CKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 154 NILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM-- 211
N +I G +A +L DEMR++ ++PD T+ +L+ L ++ EA + E
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Query: 212 ---------FREFKL--------------------EGCV---TIYTNLIKGVCKIGELSW 239
F L GC T YT LI+G+ G
Sbjct: 513 MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKE 572
Query: 240 AFRIKDEMVKKGL 252
A + +E+ KGL
Sbjct: 573 ALELLNELCNKGL 585
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 57/129 (44%), Gaps = 3/129 (2%)
Query: 328 NVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMF 387
N L + + G+ E +M G PD++ TL G CR + R+A +L+ +
Sbjct: 106 NNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEG 165
Query: 388 KGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPE 447
G P N +S C+ G +VL ++ + ++ +L +C K+ +
Sbjct: 166 SGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVT---YNTILRSLCDSGKLKQ 222
Query: 448 SFELLDALV 456
+ E+LD ++
Sbjct: 223 AMEVLDRML 231
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 181 bits (460), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 126/457 (27%), Positives = 228/457 (49%), Gaps = 11/457 (2%)
Query: 4 PKPISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPE 63
PK +SP + LL+S+K+P AF LF + T H + HS + Y I+ +L +M+
Sbjct: 5 PKSLSPKHVLKLLKSEKNPRAAFALF---DSATRHPGYAHSAVVYHHILRRLSETRMVNH 61
Query: 64 MEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPS-FRCQRTLKSFNTL 122
+ +++ +L + E + VI Y + P +A+ F + F C+ ++S+NTL
Sbjct: 62 VSRIV-ELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTL 120
Query: 123 LHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRSRGV 181
L+A + +Q+ V L A G AP+ TYN+LI+ SC + ++A D M G
Sbjct: 121 LNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGF 180
Query: 182 RPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAF 241
+PD ++ T+I+ L + +L +A EL +EM E + VT Y LI G K + A
Sbjct: 181 KPDVFSYSTVINDLAKAGKLDDALELFDEM-SERGVAPDVTCYNILIDGFLKEKDHKTAM 239
Query: 242 RIKDEMVK-KGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGE 300
+ D +++ + + +N +I+ L K G+ ++ L++ E M++ E + T + +I
Sbjct: 240 ELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHG 299
Query: 301 YCRENNFEEAYRILDGVEGVKP--DVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPD 358
C N ++A + + ++ K DV+ YN LG C+ GK E+++L+ M + + +
Sbjct: 300 LCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKN-SVN 358
Query: 359 VVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLS 418
+V+Y L GL + EA ++ M KGYA F+ LC G V+
Sbjct: 359 IVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQ 418
Query: 419 DLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
++ S G + + ++ +CK +++ E+ L+ +
Sbjct: 419 EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEM 455
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 187/418 (44%), Gaps = 11/418 (2%)
Query: 41 FRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCH--VITFYARARQPS 98
F+ + SY +I L +A L + ++ ++ + V + C+ +I + + +
Sbjct: 180 FKPDVFSYSTVINDLAKAGKLDDALELFDEM---SERGVAPDVTCYNILIDGFLKEKDHK 236
Query: 99 RAVQTFLSI-PSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNIL 156
A++ + + +K+ N ++ L C + D ++ R + D TY+ L
Sbjct: 237 TAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSL 296
Query: 157 IRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFK 216
I C G+ D+A +F+E+ R D T+ T++ C +++E+ EL M E K
Sbjct: 297 IHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM--EHK 354
Query: 217 LEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEAL 276
+ Y LIKG+ + G++ A I M KG D Y I+ L G +AL
Sbjct: 355 NSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKAL 414
Query: 277 RVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWL 334
V++E+ G + +I C++ EEA ++ + GV+ + N +G L
Sbjct: 415 GVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGL 474
Query: 335 CKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLS 394
++ + EA +M + GC P VV+Y L GLC+ +F EA + EM+ G+ P
Sbjct: 475 IRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDL 534
Query: 395 KNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
K + + LC++ +L + G + + ++++ +C K+ ++ ++
Sbjct: 535 KTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVM 592
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 147/328 (44%), Gaps = 10/328 (3%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEM 176
S+N L+ LL + D T + G A D TY I I C+ G+ ++A + E+
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFR---EFKLEGCVTIYTNLIKGVCK 233
S G D + ++I LC+ RL EA L +EM + E C + LI+ +
Sbjct: 421 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD-SR 479
Query: 234 IGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
+GE S+ R EM K G + YN LI L KAGK EA ++EM E G + + T
Sbjct: 480 LGEASFFLR---EMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKT 536
Query: 294 CNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
++++ CR+ + A + G++ DV+ +N+ + LC GK +AM + +M
Sbjct: 537 YSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANME 596
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
R C ++VTY TL +G + A V+ M G P + N + LC
Sbjct: 597 HRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVS 656
Query: 412 LLSTVLSDLTSKGKICNEGIWDVVLSMV 439
D + G W++++ V
Sbjct: 657 YAMEFFDDARNHGIFPTVYTWNILVRAV 684
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/221 (19%), Positives = 99/221 (44%), Gaps = 4/221 (1%)
Query: 240 AFRIKDEMVKK-GLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMI 298
AF + D + G A +Y+ ++ L + R++E +R C+ + +I
Sbjct: 26 AFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVI 85
Query: 299 GEYCRENNFEEA---YRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGC 355
Y + + ++A ++ + + G +P + YN L + +W + LF G
Sbjct: 86 KTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGV 145
Query: 356 APDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLST 415
AP++ TY L C+ ++F +A LD M +G+ P + + +++L + G +
Sbjct: 146 APNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALE 205
Query: 416 VLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ +++ +G + +++++ K + + EL D L+
Sbjct: 206 LFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL 246
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 123/457 (26%), Positives = 207/457 (45%), Gaps = 49/457 (10%)
Query: 36 TNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARAR 95
N F+H+ L+++++I KL + ++ +L Q+ L H E L VI+ Y +
Sbjct: 67 ANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFH-CSEDLFISVISVYRQVG 125
Query: 96 QPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYN 154
RAV+ F I F C ++K +N +L LL + + + G P+ TYN
Sbjct: 126 LAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYN 185
Query: 155 ILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFRE 214
+L++A C D A +L EM ++G PD ++ T+I +CE ++E EL E
Sbjct: 186 VLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAE----- 240
Query: 215 FKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEE 274
+ E V++Y LI G+CK + AF + EMV+KG+ + Y+TLIN L +G+ E
Sbjct: 241 -RFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIEL 299
Query: 275 ALRVLEEMREGGCE-------------------------WNS-----------VTCNVMI 298
A L +M + GC WN V N ++
Sbjct: 300 AFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLV 359
Query: 299 GEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCA 356
+C N +A + +E G P++ Y + K G A+ +++ M GC
Sbjct: 360 QGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCC 419
Query: 357 PDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTV 416
P+VV Y + + LCR +F+EA +++ M + AP NAF+ LC G + V
Sbjct: 420 PNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 479
Query: 417 LSDLTSKGKICNEGI--WDVVLSMVCKPEKVPESFEL 451
+ + + C I ++ +L + K ++ E++ L
Sbjct: 480 FRQMEQQHR-CPPNIVTYNELLDGLAKANRIEEAYGL 515
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 91/347 (26%), Positives = 153/347 (44%), Gaps = 4/347 (1%)
Query: 111 RCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRA 169
R + + +N L++ L + EL E G +P+ +Y+ LI C G + A
Sbjct: 241 RFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELA 300
Query: 170 FELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIK 229
F +M RG P+ T +L+ +A +L +M R F L+ V Y L++
Sbjct: 301 FSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQ 360
Query: 230 GVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEW 289
G C G + A + M + G + Y +LIN K G + A+ + +M GC
Sbjct: 361 GFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCP 420
Query: 290 NSVTCNVMIGEYCRENNFEEAYRILD--GVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLF 347
N V M+ CR + F+EA +++ E P V +N F+ LC G+ A +F
Sbjct: 421 NVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVF 480
Query: 348 HDMPRRG-CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQ 406
M ++ C P++VTY L DGL + + EA + E+ +G S N + C
Sbjct: 481 RQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCN 540
Query: 407 EGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLD 453
G + ++ + GK +E ++++ CK K + ++LD
Sbjct: 541 AGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLD 587
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 138/292 (47%), Gaps = 7/292 (2%)
Query: 107 IPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGH 165
I F Q + ++NTL+ + + + E G +P+ TY LI RG
Sbjct: 343 IRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGS 402
Query: 166 ADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYT 225
D A ++++M + G P+ + ++ LC +S+ +EA L E M +E V +
Sbjct: 403 LDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKE-NCAPSVPTFN 461
Query: 226 NLIKGVCKIGELSWAFRIKDEMVKKG-LKLDAALYNTLINALFKAGKKEEALRVLEEMRE 284
IKG+C G L WA ++ +M ++ + YN L++ L KA + EEA + E+
Sbjct: 462 AFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFM 521
Query: 285 GGCEWNSVTCNVMIGEYCRENNFEEAYRILDG--VEGVKPDVIGYNVFLGWLCKEGKWSE 342
G EW+S T N ++ C A +++ V+G PD I N+ + CK+GK
Sbjct: 522 RGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAER 581
Query: 343 AMDLFHDMP--RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
A + + RR PDV++Y + GLCR + V++L+ M+ G P
Sbjct: 582 AAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVP 633
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/232 (21%), Positives = 109/232 (46%), Gaps = 7/232 (3%)
Query: 227 LIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGG 286
+I+ + G++ + +M +G L+ ++I+ + G E A+ + ++E G
Sbjct: 82 MIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFG 141
Query: 287 CEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAM 344
C+ + N ++ EN + Y + + +G +P+V YNV L LCK K A
Sbjct: 142 CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAK 201
Query: 345 DLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSEL 404
L +M +GC PD V+Y T+ +C +E + + + P+ NA ++ L
Sbjct: 202 KLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEG-----RELAERFEPVVSVYNALINGL 256
Query: 405 CQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
C+E +++ ++ ++ KG N + +++++C ++ +F L ++
Sbjct: 257 CKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQML 308
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/489 (26%), Positives = 225/489 (46%), Gaps = 42/489 (8%)
Query: 6 PISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEME 65
P+ P ++++++ QKDP A ++F N F+H+L +Y +I KLG ME
Sbjct: 4 PLLPKHVTAVIKCQKDPMKALEMF---NSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAME 60
Query: 66 QVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHA 125
+VL + + + + E + + Y R + AV F + + C+ T+ S+N ++
Sbjct: 61 EVLVDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSV 120
Query: 126 LLTCRQFDAVTELAARAGEFG-APDACTYNILIRASC--LRGHAD--------------- 167
L+ FD ++ R + G PD ++ I +++ C R HA
Sbjct: 121 LVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMN 180
Query: 168 ------------------RAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKE 209
+ELF +M + GV +TF L+ LC+ ++E +L +
Sbjct: 181 VVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLD 240
Query: 210 EMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKA 269
++ + L T Y I+G+C+ GEL A R+ ++++G K D YN LI L K
Sbjct: 241 KVIKRGVLPNLFT-YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKN 299
Query: 270 GKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRIL-DGV-EGVKPDVIGY 327
K +EA L +M G E +S T N +I YC+ + A RI+ D V G PD Y
Sbjct: 300 SKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTY 359
Query: 328 NVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMF 387
+ LC EG+ + A+ LF++ +G P+V+ Y TL GL EA + +EM
Sbjct: 360 RSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE 419
Query: 388 KGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPE 447
KG P + N V+ LC+ G ++ + SKG + +++++ K+
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMEN 479
Query: 448 SFELLDALV 456
+ E+LD ++
Sbjct: 480 ALEILDVML 488
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 150/312 (48%), Gaps = 4/312 (1%)
Query: 118 SFNTLLHALLTCRQF-DAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEM 176
++N L++ L +F +A L E PD+ TYN LI C G A + +
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
G PDQ T+ +LI LC A L E + ++ V +Y LIKG+ G
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK-GIKPNVILYNTLIKGLSNQGM 406
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
+ A ++ +EM +KGL + +N L+N L K G +A +++ M G + T N+
Sbjct: 407 ILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNI 466
Query: 297 MIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
+I Y + E A ILD + GV PDV YN L LCK K+ + M+ + M +G
Sbjct: 467 LIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLS 414
CAP++ T+ L + LCR+R+ EA+ +L+EM K P + + C+ G+ +
Sbjct: 527 CAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAY 586
Query: 415 TVLSDLTSKGKI 426
T+ + K+
Sbjct: 587 TLFRKMEEAYKV 598
Score = 140 bits (352), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/376 (27%), Positives = 173/376 (46%), Gaps = 8/376 (2%)
Query: 85 CHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDA--VTELAARA 142
C V+ + + + F + + L +FN LL L C++ D +L +
Sbjct: 185 CTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVL--CKKGDVKECEKLLDKV 242
Query: 143 GEFGA-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRL 201
+ G P+ TYN+ I+ C RG D A + + +G +PD T+ LI+ LC+NS+
Sbjct: 243 IKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKF 302
Query: 202 REAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNT 261
+EA +M E LE Y LI G CK G + A RI + V G D Y +
Sbjct: 303 QEAEVYLGKMVNE-GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRS 361
Query: 262 LINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EG 319
LI+ L G+ AL + E G + N + N +I + EA ++ + + +G
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Query: 320 VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAV 379
+ P+V +N+ + LCK G S+A L M +G PD+ T+ L G + A+
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 380 VVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMV 439
+LD M+ G P N+ ++ LC+ FE + + KG N ++++L +
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Query: 440 CKPEKVPESFELLDAL 455
C+ K+ E+ LL+ +
Sbjct: 542 CRYRKLDEALGLLEEM 557
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 153/350 (43%), Gaps = 43/350 (12%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
PD TY LI C G +RA LF+E +G++P+ + TLI L + EA +
Sbjct: 353 VPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQ 412
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
L EM E L V + L+ G+CK+G +S A + M+ KG D +N LI+
Sbjct: 413 LANEM-SEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGY 471
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFE---EAYRILDGVE-GVKP 322
K E AL +L+ M + G + + T N ++ C+ + FE E Y+ + VE G P
Sbjct: 472 STQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTM--VEKGCAP 529
Query: 323 DVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCR----------W 372
++ +N+ L LC+ K EA+ L +M + PD VT+ TL DG C+ +
Sbjct: 530 NLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Query: 373 RQFREAVVV--------------------------LDEMMFKGYAPLSKNLNAFVSELCQ 406
R+ EA V EM+ + P V C+
Sbjct: 590 RKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCK 649
Query: 407 EGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
GN L L ++ G I + V++ +C ++V E+ ++ +V
Sbjct: 650 TGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMV 699
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/337 (27%), Positives = 145/337 (43%), Gaps = 7/337 (2%)
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMR 177
+NTL+ L +LA E G P+ T+NIL+ C G A L M
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGEL 237
S+G PD TF LIH ++ A E+ + M ++ V Y +L+ G+CK +
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDN-GVDPDVYTYNSLLNGLCKTSKF 512
Query: 238 SWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVM 297
MV+KG + +N L+ +L + K +EAL +LEEM+ ++VT +
Sbjct: 513 EDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTL 572
Query: 298 IGEYCRENNFEEAYRILDGVE---GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
I +C+ + + AY + +E V YN+ + ++ + A LF +M R
Sbjct: 573 IDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRC 632
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLS 414
PD TYR + DG C+ L EMM G+ P L ++ LC E +
Sbjct: 633 LGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAA 692
Query: 415 TVLSDLTSKGKI--CNEGIWDVVLSMVCKPEKVPESF 449
++ + KG + I DV V P+ V E
Sbjct: 693 GIIHRMVQKGLVPEAVNTICDVDKKEVAAPKLVLEDL 729
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 122/265 (46%), Gaps = 13/265 (4%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEM 176
++N+LL+ L +F+ V E E G AP+ T+NIL+ + C D A L +EM
Sbjct: 498 TYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
+++ V PD TFGTLI C+N L A+ L +M +K+ Y +I +
Sbjct: 558 KNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLN 617
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
++ A ++ EMV + L D Y +++ K G + L EM E G + T
Sbjct: 618 VTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGR 677
Query: 297 MIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMD--LFHDMPR 352
+I C E+ EA I+ + +G+ P+ + +C K A + D+ +
Sbjct: 678 VINCLCVEDRVYEAAGIIHRMVQKGLVPEAV------NTICDVDKKEVAAPKLVLEDLLK 731
Query: 353 RGCAPDVVTYRTLFDGLCRWRQFRE 377
+ C Y LFDGL R ++ R+
Sbjct: 732 KSCIT-YYAYELLFDGL-RDKRLRK 754
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 179 bits (454), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 127/525 (24%), Positives = 244/525 (46%), Gaps = 84/525 (16%)
Query: 7 ISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQ 66
I+PF+L LL + S + +LF Q +RHS Y ++I KLG +++
Sbjct: 76 ITPFQLYKLLELPLNVSTSMELFSWTGSQNG---YRHSFDVYQVLIGKLGANGEFKTIDR 132
Query: 67 VLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPS-FRCQRTLKSFNTLLHA 125
+L Q+ D E L ++ Y +A P + + L + + + C+ T KS+N +L
Sbjct: 133 LLIQMK-DEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEI 191
Query: 126 LLT--CRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRP 183
L++ C + A + + P T+ ++++A C D A L +M G P
Sbjct: 192 LVSGNCHKVAANVFYDMLSRKI-PPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVP 250
Query: 184 DQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCV---TIYTNLIKGVCKIGELSWA 240
+ + TLIH L + +R+ EA +L EEMF L GCV + ++I G+CK ++ A
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMF----LMGCVPDAETFNDVILGLCKFDRINEA 306
Query: 241 FRIKDEMVKKGL------------------KLDAA-------------LYNTLINALFKA 269
++ + M+ +G ++DAA ++NTLI+
Sbjct: 307 AKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTH 366
Query: 270 GKKEEALRVLEEM---------------------REG---------------GCEWNSVT 293
G+ ++A VL +M +EG GC+ N +
Sbjct: 367 GRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYS 426
Query: 294 CNVMIGEYCRENNFEEAYRILD--GVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
+++ +C+ +EAY +L+ +G+KP+ +G+N + CKE + EA+++F +MP
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
R+GC PDV T+ +L GLC + + A+ +L +M+ +G + N ++ + G +
Sbjct: 487 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 546
Query: 412 LLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+++++ +G +E ++ ++ +C+ +V ++ L + ++
Sbjct: 547 EARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 172/369 (46%), Gaps = 46/369 (12%)
Query: 119 FNTLLHALLT-CRQFDAVTELAARAGEFG-APDACTYN---------------------- 154
FNTL+H +T R DA L+ +G PD CTYN
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415
Query: 155 -------------ILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRL 201
IL+ C G D A+ + +EM + G++P+ F LI C+ R+
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475
Query: 202 REAFELKEEMFREFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAAL 258
EA E+ FRE +GC V + +LI G+C++ E+ A + +M+ +G+ +
Sbjct: 476 PEAVEI----FREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531
Query: 259 YNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV- 317
YNTLINA + G+ +EA +++ EM G + +T N +I CR ++A + + +
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Query: 318 -EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFR 376
+G P I N+ + LC+ G EA++ +M RG PD+VT+ +L +GLCR +
Sbjct: 592 RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 651
Query: 377 EAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVL 436
+ + + ++ +G P + N +S LC+ G +L + G + N W ++L
Sbjct: 652 DGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Query: 437 SMVCKPEKV 445
+ E +
Sbjct: 712 QSIIPQETL 720
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 190/404 (47%), Gaps = 17/404 (4%)
Query: 63 EMEQVLHQLHLDTRHR-VPEPLLCH-VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFN 120
E++ L L T+H VP ++ +I ++ + + A+Q + C ++FN
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291
Query: 121 TLLHALLTCRQFDAVTELAARAGEF----GAPDACTYNILIRASCLRGHADRAFELFDEM 176
++ L C+ FD + E A APD TY L+ C G D A +LF
Sbjct: 292 DVILGL--CK-FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF--- 345
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
R +P+ F TLIH + RL +A + +M + + V Y +LI G K G
Sbjct: 346 -YRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
+ A + +M KG K + Y L++ K GK +EA VL EM G + N+V N
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNC 464
Query: 297 MIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
+I +C+E+ EA I + +G KPDV +N + LC+ + A+ L DM G
Sbjct: 465 LISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEG 524
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSK-NLNAFVSELCQEGNFELL 413
+ VTY TL + R + +EA +++EM+F+G +PL + N+ + LC+ G +
Sbjct: 525 VVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG-SPLDEITYNSLIKGLCRAGEVDKA 583
Query: 414 STVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALVL 457
++ + G + +++++ +C+ V E+ E +VL
Sbjct: 584 RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL 627
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 179 bits (453), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 129/463 (27%), Positives = 226/463 (48%), Gaps = 17/463 (3%)
Query: 4 PKPISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPE 63
P+ + P RL S++ Q++ +A Q+FL +H F H+ +Y I+ KL RA+
Sbjct: 44 PQRLFPKRLVSMITQQQNIDLALQIFLYAG--KSHPGFTHNYDTYHSILFKLSRARAFDP 101
Query: 64 MEQVLHQLHLDTRHRVP-----EPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKS 118
+E ++ D R+ P E L ++ Y A + +++ FL IP F +R+++S
Sbjct: 102 VESLMA----DLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRS 157
Query: 119 FNTLLHALLTCRQFDAVTELAARAGE-FG-APDACTYNILIRASCLRGHADRAFELFDEM 176
NTLL+ L+ ++FD V + + E FG P+ T N+L++A C + + A+++ DE+
Sbjct: 158 LNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEI 217
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
S G+ P+ T+ T++ + A + EEM T YT L+ G CK+G
Sbjct: 218 PSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATT-YTVLMDGYCKLGR 276
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
S A + D+M K ++ + Y +I AL K K EA + +EM E +S C
Sbjct: 277 FSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCK 336
Query: 297 MIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
+I C ++ +EA + + PD + + WLCKEG+ +EA LF + +G
Sbjct: 337 VIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEF-EKG 395
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLS 414
P ++TY TL G+C + EA + D+M + P + N + L + GN +
Sbjct: 396 SIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGV 455
Query: 415 TVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALVL 457
VL ++ G N+ + ++ + K K ++ +++ V+
Sbjct: 456 RVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVM 498
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 95/185 (51%), Gaps = 3/185 (1%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD+ +I A C D A L+ +M PD A TLIH LC+ R+ EA +L
Sbjct: 329 PDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKL 388
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+E F + + +T Y LI G+C+ GEL+ A R+ D+M ++ K +A YN LI L
Sbjct: 389 FDE-FEKGSIPSLLT-YNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLS 446
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILD-GVEGVKPDVIG 326
K G +E +RVLEEM E GC N T ++ + E+A +I+ V K D
Sbjct: 447 KNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNGKVDKES 506
Query: 327 YNVFL 331
+ +FL
Sbjct: 507 WELFL 511
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 179 bits (453), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 200/397 (50%), Gaps = 16/397 (4%)
Query: 64 MEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLS-IPSFRCQRTLKSFNTL 122
+E++L ++ L+ R + + V Y +A P +AV F + FRC+R++KSFN++
Sbjct: 96 VEKLLSRIRLENRVIIERSFIV-VFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSV 154
Query: 123 LHALLTCRQFDAVTE-----LAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMR 177
L+ ++ + E + + +P+ ++N++I+A C DRA E+F M
Sbjct: 155 LNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMP 214
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCV---TIYTNLIKGVCKI 234
R PD T+ TL+ LC+ R+ EA L +EM + EGC IY LI G+CK
Sbjct: 215 ERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM----QSEGCSPSPVIYNVLIDGLCKK 270
Query: 235 GELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTC 294
G+L+ ++ D M KG + YNTLI+ L GK ++A+ +LE M C N VT
Sbjct: 271 GDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTY 330
Query: 295 NVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPR 352
+I ++ +A R+L +E G + Y+V + L KEGK EAM L+ M
Sbjct: 331 GTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAE 390
Query: 353 RGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFEL 412
+GC P++V Y L DGLCR + EA +L+ M+ G P + ++ + + G E
Sbjct: 391 KGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEE 450
Query: 413 LSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESF 449
V ++ G N+ + V++ +C +V E+
Sbjct: 451 AVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAM 487
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 127/489 (25%), Positives = 210/489 (42%), Gaps = 71/489 (14%)
Query: 26 FQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPL-L 84
+ +N N N P + LS++L+I L + + + +V + R +P+
Sbjct: 171 YDYVVNSNMNMNISP---NGLSFNLVIKALCKLRFVDRAIEVFR--GMPERKCLPDGYTY 225
Query: 85 CHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGE 144
C ++ + + AV + S C + +N L+ L VT+L
Sbjct: 226 CTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFL 285
Query: 145 FG-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLRE 203
G P+ TYN LI CL+G D+A L + M S P+ T+GTLI+ L + R +
Sbjct: 286 KGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATD 345
Query: 204 AFELKEEM-------------------FREFKLE------------GC---VTIYTNLIK 229
A L M F+E K E GC + +Y+ L+
Sbjct: 346 AVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVD 405
Query: 230 GVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEW 289
G+C+ G+ + A I + M+ G +A Y++L+ FK G EEA++V +EM + GC
Sbjct: 406 GLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSR 465
Query: 290 NSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLF 347
N +V+I C +EA + + G+KPD + Y+ + LC G A+ L+
Sbjct: 466 NKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLY 525
Query: 348 HDM-----PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVS 402
H+M P+ PDVVTY L DGLC + AV +L+ M+ +G P N F++
Sbjct: 526 HEMLCQEEPKS--QPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLN 583
Query: 403 ELCQEGN-------------FELLS--------TVLSDLTSKGKICNEGIWDVVLSMVCK 441
L ++ N LL T++ + K W +++ +CK
Sbjct: 584 TLSEKSNSCDKGRSFLEELVVRLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICK 643
Query: 442 PEKVPESFE 450
P+K+ + +
Sbjct: 644 PKKINAAID 652
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 93/170 (54%), Gaps = 3/170 (1%)
Query: 289 WNSVTCNVMIGE--YCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDL 346
+NSV NV+I E Y R F + + + P+ + +N+ + LCK A+++
Sbjct: 151 FNSVL-NVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEV 209
Query: 347 FHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQ 406
F MP R C PD TY TL DGLC+ + EAV++LDEM +G +P N + LC+
Sbjct: 210 FRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCK 269
Query: 407 EGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+G+ ++ ++ ++ KG + NE ++ ++ +C K+ ++ LL+ +V
Sbjct: 270 KGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 88/203 (43%), Gaps = 6/203 (2%)
Query: 259 YNTLINALFKAGKKEEALR----VLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRIL 314
+N+++N + G L V+ N ++ N++I C+ + A +
Sbjct: 151 FNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVF 210
Query: 315 DGVEGVK--PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRW 372
G+ K PD Y + LCKE + EA+ L +M GC+P V Y L DGLC+
Sbjct: 211 RGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKK 270
Query: 373 RQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIW 432
++D M KG P N + LC +G + ++L + S I N+ +
Sbjct: 271 GDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTY 330
Query: 433 DVVLSMVCKPEKVPESFELLDAL 455
+++ + K + ++ LL ++
Sbjct: 331 GTLINGLVKQRRATDAVRLLSSM 353
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/488 (26%), Positives = 220/488 (45%), Gaps = 47/488 (9%)
Query: 11 RLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQ 70
+L LRSQ D S A +LF + + N P +L Y+ I+ +LGR+ +M+++L
Sbjct: 52 KLLDSLRSQPDDSAALRLFNLASKKPNFSP-EPAL--YEEILLRLGRSGSFDDMKKILED 108
Query: 71 LHLDTRHRVPEPLLCHVITFYARARQPSRAVQTF-LSIPSFRCQRTLKSFNTLLHALLTC 129
+ +R + +I YA+ + I F + +N +L+ L+
Sbjct: 109 MK-SSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDG 167
Query: 130 RQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADR-AFELFDEMRSRGVRPDQAT 187
V A+ +G PD T+N+LI+A C R H R A + ++M S G+ PD+ T
Sbjct: 168 NSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC-RAHQLRPAILMLEDMPSYGLVPDEKT 226
Query: 188 FGT-----------------------------------LIHRLCENSRLREAFELKEEMF 212
F T ++H C+ R+ +A +EM
Sbjct: 227 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMS 286
Query: 213 REFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKK 272
+ + L+ G+CK G + A I D M+++G D YN++I+ L K G+
Sbjct: 287 NQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEV 346
Query: 273 EEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAY---RILDGVEGVKPDVIGYNV 329
+EA+ VL++M C N+VT N +I C+EN EEA R+L +G+ PDV +N
Sbjct: 347 KEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTS-KGILPDVCTFNS 405
Query: 330 FLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKG 389
+ LC AM+LF +M +GC PD TY L D LC + EA+ +L +M G
Sbjct: 406 LIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG 465
Query: 390 YAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESF 449
A N + C+ + ++ G N ++ ++ +CK +V ++
Sbjct: 466 CARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAA 525
Query: 450 ELLDALVL 457
+L+D +++
Sbjct: 526 QLMDQMIM 533
Score = 176 bits (446), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 191/408 (46%), Gaps = 40/408 (9%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
+I RA Q A+ +PS+ K+F T++ + D + + EFG
Sbjct: 195 LIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 147 AP-DACTYNILIRASCLRGHADRAFELFDEMRSR-GVRPDQATFGTLIHRLCENSRLREA 204
+ N+++ C G + A EM ++ G PDQ TF TL++ LC+ ++ A
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 205 FELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLIN 264
E+ + M +E + V Y ++I G+CK+GE+ A + D+M+ + + YNTLI+
Sbjct: 315 IEIMDVMLQE-GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLIS 373
Query: 265 ALFKAGKKEEA-----------------------------------LRVLEEMREGGCEW 289
L K + EEA + + EEMR GCE
Sbjct: 374 TLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEP 433
Query: 290 NSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLF 347
+ T N++I C + +EA +L +E G VI YN + CK K EA ++F
Sbjct: 434 DEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIF 493
Query: 348 HDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQE 407
+M G + + VTY TL DGLC+ R+ +A ++D+M+ +G P N+ ++ C+
Sbjct: 494 DEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRG 553
Query: 408 GNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
G+ + + ++ +TS G + + ++S +CK +V + +LL ++
Sbjct: 554 GDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 110/349 (31%), Positives = 168/349 (48%), Gaps = 47/349 (13%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
VI+ + + AV+ + + C ++NTL+ L Q + TELA G
Sbjct: 336 VISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 395
Query: 147 A-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
PD CT+N LI+ CL + A ELF+EMRS+G PD+ T+ LI LC +L EA
Sbjct: 396 ILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEAL 455
Query: 206 ELKEEMFREFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTL 262
M ++ +L GC V Y LI G CK + A I DEM G+ ++ YNTL
Sbjct: 456 N----MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511
Query: 263 INALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGV 320
I+ L K+ + E+A +++++M G + + T N ++ +CR + ++A I+ + G
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGC 571
Query: 321 KPDVIGYNVFLGWLCKEG-----------------------------------KWSEAMD 345
+PD++ Y + LCK G K +EA++
Sbjct: 572 EPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAIN 631
Query: 346 LFHDMPRRGCA-PDVVTYRTLFDGLCRWRQ-FREAVVVLDEMMFKGYAP 392
LF +M + A PD V+YR +F GLC REAV L E++ KG+ P
Sbjct: 632 LFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVP 680
Score = 159 bits (403), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 159/338 (47%), Gaps = 4/338 (1%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEM 176
+FNTL++ L E+ + G PD TYN +I C G A E+ D+M
Sbjct: 297 TFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM 356
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
+R P+ T+ TLI LC+ +++ EA EL + + L T + +LI+G+C
Sbjct: 357 ITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT-FNSLIQGLCLTRN 415
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
A + +EM KG + D YN LI++L GK +EAL +L++M GC + +T N
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 297 MIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
+I +C+ N EA I D +E GV + + YN + LCK + +A L M G
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLS 414
PD TY +L CR ++A ++ M G P +S LC+ G E+ S
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVAS 595
Query: 415 TVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+L + KG ++ V+ + + K E+ L
Sbjct: 596 KLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLF 633
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 174 bits (441), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 124/459 (27%), Positives = 218/459 (47%), Gaps = 15/459 (3%)
Query: 5 KPISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEM 64
K I+P ++ L+R++KD + +F + + + + H S+ ++ +L A
Sbjct: 12 KNITPSQVIKLMRAEKDVEKSMAVFDSATAEYAN-GYVHDQSSFGYMVLRLVSANKFKAA 70
Query: 65 EQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLH 124
E ++ ++ ++ V E +L + Y R +P +++ F + F C + K++ T+L
Sbjct: 71 EDLIVRMKIEN-CVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLA 129
Query: 125 ALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLR-GHADRAFELFDEMRSRGVR 182
L+ Q + + E G P + N+LI+A C G D ++F EM RG
Sbjct: 130 ILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCD 189
Query: 183 PDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFR 242
PD T+GTLI LC R+ EA +L EM E V YT+LI G+C + A R
Sbjct: 190 PDSYTYGTLISGLCRFGRIDEAKKLFTEMV-EKDCAPTVVTYTSLINGLCGSKNVDEAMR 248
Query: 243 IKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYC 302
+EM KG++ + Y++L++ L K G+ +A+ + E M GC N VT +I C
Sbjct: 249 YLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLC 308
Query: 303 RENNFEEAYRILD--GVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVV 360
+E +EA +LD ++G+KPD Y + C K+ EA + +M G P+ +
Sbjct: 309 KEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRL 368
Query: 361 TYRT-------LFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELL 413
T+ + GLC R + L M +G + + L + V LC++G F+
Sbjct: 369 TWNIHVKTSNEVVRGLCANYPSRAFTLYL-SMRSRGISVEVETLESLVKCLCKKGEFQKA 427
Query: 414 STVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
++ ++ + G I ++G W +++ V E+ + L
Sbjct: 428 VQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEASDTL 466
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 142/301 (47%), Gaps = 13/301 (4%)
Query: 166 ADRAFELFDEMRS---RGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVT 222
+++ +FD + G DQ++FG ++ RL ++ + A E++ K+E CV
Sbjct: 29 VEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAA----EDLIVRMKIENCVV 84
Query: 223 ---IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVL 279
I ++ +G ++ + R+ +M Y T++ L + + A +
Sbjct: 85 SEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFY 144
Query: 280 EEMREGGCEWNSVTCNVMIGEYCRENNFEEA-YRILDGV--EGVKPDVIGYNVFLGWLCK 336
+ MRE G + NV+I CR + +A +I + G PD Y + LC+
Sbjct: 145 KNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCR 204
Query: 337 EGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN 396
G+ EA LF +M + CAP VVTY +L +GLC + EA+ L+EM KG P
Sbjct: 205 FGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFT 264
Query: 397 LNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
++ + LC++G + + ++G N + +++ +CK +K+ E+ ELLD +
Sbjct: 265 YSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMN 324
Query: 457 L 457
L
Sbjct: 325 L 325
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 111/373 (29%), Positives = 184/373 (49%), Gaps = 8/373 (2%)
Query: 84 LCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHAL-LTCRQFDAVTELAARA 142
L +I + R R+ S A T I + FNTLL+ L L CR +A+ EL R
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEAL-ELVDRM 184
Query: 143 GEFG-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRL 201
E G P T N L+ CL G A L D M G +P++ T+G +++ +C++ +
Sbjct: 185 VEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQT 244
Query: 202 REAFELKEEM-FREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYN 260
A EL +M R KL+ Y+ +I G+CK G L AF + +EM KG K D YN
Sbjct: 245 ALAMELLRKMEERNIKLDA--VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYN 302
Query: 261 TLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--E 318
TLI AG+ ++ ++L +M + N VT +V+I + +E EA ++L +
Sbjct: 303 TLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Query: 319 GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREA 378
G+ P+ I YN + CKE + EA+ + M +GC PD++T+ L +G C+ + +
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422
Query: 379 VVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSM 438
+ + EM +G + N V CQ G E+ + ++ S+ + + ++L
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDG 482
Query: 439 VCKPEKVPESFEL 451
+C ++ ++ E+
Sbjct: 483 LCDNGELEKALEI 495
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 181/367 (49%), Gaps = 8/367 (2%)
Query: 96 QPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYN 154
+ AV F + R T+ FN L A+ +Q++ V L + G A T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 155 ILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFRE 214
I+I C AF ++ G PD F TL++ LC R+ EA EL + M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 215 FKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEE 274
+T+ T L+ G+C G++S A + D MV+ G + + Y ++N + K+G+
Sbjct: 188 GHKPTLITLNT-LVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 275 ALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLG 332
A+ +L +M E + ++V +++I C++ + + A+ + + +E G K D+I YN +G
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 333 WLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
C G+W + L DM +R +P+VVT+ L D + + REA +L EMM +G AP
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 393 LSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGI--WDVVLSMVCKPEKVPESFE 450
+ N+ + C+E E ++ + SKG C+ I ++++++ CK ++ + E
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKG--CDPDIMTFNILINGYCKANRIDDGLE 424
Query: 451 LLDALVL 457
L + L
Sbjct: 425 LFREMSL 431
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 169/345 (48%), Gaps = 4/345 (1%)
Query: 115 TLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELF 173
++ + + +++ CR+ + + G PD +N L+ CL A EL
Sbjct: 122 SIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELV 181
Query: 174 DEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCK 233
D M G +P T TL++ LC N ++ +A L + M E + Y ++ +CK
Sbjct: 182 DRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV-ETGFQPNEVTYGPVLNVMCK 240
Query: 234 IGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
G+ + A + +M ++ +KLDA Y+ +I+ L K G + A + EM G + + +T
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIT 300
Query: 294 CNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
N +IG +C +++ ++L + + P+V+ ++V + KEGK EA L +M
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMM 360
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
+RG AP+ +TY +L DG C+ + EA+ ++D M+ KG P N ++ C+ +
Sbjct: 361 QRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420
Query: 412 LLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ +++ +G I N ++ ++ C+ K+ + +L +V
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMV 465
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 147/309 (47%), Gaps = 3/309 (0%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
D TYN LI C G D +L +M R + P+ TF LI + +LREA +L
Sbjct: 297 DIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
+EM + +T Y +LI G CK L A ++ D M+ KG D +N LIN K
Sbjct: 357 KEMMQRGIAPNTIT-YNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK 415
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VKPDVIG 326
A + ++ L + EM G N+VT N ++ +C+ E A ++ + V+PD++
Sbjct: 416 ANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVS 475
Query: 327 YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMM 386
Y + L LC G+ +A+++F + + D+ Y + G+C + +A + +
Sbjct: 476 YKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLP 535
Query: 387 FKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVP 446
KG ++ N +SELC++ + + +T +G +E +++++ +
Sbjct: 536 LKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDAT 595
Query: 447 ESFELLDAL 455
+ EL++ +
Sbjct: 596 TAAELIEEM 604
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/457 (25%), Positives = 212/457 (46%), Gaps = 8/457 (1%)
Query: 5 KPISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEM 64
+ + P ++ ++LRSQ D VA + F + Q +RH + Y ++ L + K+
Sbjct: 170 RSLKPSQVCAVLRSQDDERVALKFFYWADRQWR---YRHDPMVYYSMLEVLSKTKLCQGS 226
Query: 65 EQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLH 124
+VL + +R PE V+ Y+RA Q A++ + + L NT +
Sbjct: 227 RRVLVLMKRRGIYRTPEAF-SRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTID 285
Query: 125 ALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRP 183
+ + + R G P+ TYN +IR C + A EL ++M S+G P
Sbjct: 286 VFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLP 345
Query: 184 DQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRI 243
D+ ++ T++ LC+ R+ E +L ++M +E L Y LI + K A
Sbjct: 346 DKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWF 405
Query: 244 KDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEM-REGGCEWNSVTCNVMIGEYC 302
+ +KG ++D Y+ +++AL K G+ EA ++ EM +G C + VT ++ +C
Sbjct: 406 LKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFC 465
Query: 303 RENNFEEAYRILD--GVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVV 360
R ++A ++L G KP+ + Y L +C+ GK EA ++ + +P+ +
Sbjct: 466 RLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSI 525
Query: 361 TYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDL 420
TY + GL R + EA V+ EM+ KG+ P +N + LC++G + +
Sbjct: 526 TYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEEC 585
Query: 421 TSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALVL 457
+KG N + V+ C+ +++ + +LD + L
Sbjct: 586 LNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYL 622
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 167/374 (44%), Gaps = 4/374 (1%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAAR-AGEF 145
+I Y + A++ + S C S+ T++ L ++ V +L + A E
Sbjct: 318 MIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEH 377
Query: 146 G-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREA 204
G PD TYN LI HAD A + + +G R D+ + ++H LC+ R+ EA
Sbjct: 378 GLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEA 437
Query: 205 FELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLIN 264
+L EM + V YT ++ G C++GE+ A ++ M G K + Y L+N
Sbjct: 438 KDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLN 497
Query: 265 ALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKP 322
+ + GK EA ++ E NS+T +V++ RE EA ++ + +G P
Sbjct: 498 GMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFP 557
Query: 323 DVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVL 382
+ N+ L LC++G+ EA + +GCA +VV + T+ G C+ + A+ VL
Sbjct: 558 GPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVL 617
Query: 383 DEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKP 442
D+M V L ++G + ++ + KG + V+ C+
Sbjct: 618 DDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQM 677
Query: 443 EKVPESFELLDALV 456
KV + +L+ ++
Sbjct: 678 GKVDDLVAILEKMI 691
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 162/398 (40%), Gaps = 10/398 (2%)
Query: 39 RPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPL-LCHVITFYARARQP 97
+ FR L Y I+ L + + E + +++++ L H P+ + V+ + R +
Sbjct: 412 KGFRIDKLGYSAIVHALCKEGRMSEAKDLINEM-LSKGHCPPDVVTYTAVVNGFCRLGEV 470
Query: 98 SRAVQTFLSIPSFRCQRTLKSFNTLLHALL-TCRQFDAVTELAARAGEFGAPDACTYNIL 156
+A + + + + S+ LL+ + T + +A + + +P++ TY+++
Sbjct: 471 DKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVI 530
Query: 157 IRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFK 216
+ G A ++ EM +G P L+ LC + R EA + EE +
Sbjct: 531 MHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNK-- 588
Query: 217 LEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKE 273
GC V +T +I G C+ EL A + D+M D Y TL++ L K G+
Sbjct: 589 --GCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIA 646
Query: 274 EALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGW 333
EA ++++M G + VT +I YC+ ++ IL+ + + YN +
Sbjct: 647 EATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIEK 706
Query: 334 LCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPL 393
LC GK EA L + R D T L +G + A V M + P
Sbjct: 707 LCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPD 766
Query: 394 SKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGI 431
K L +G + ++ L +G I + +
Sbjct: 767 VKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQSL 804
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 123/440 (27%), Positives = 202/440 (45%), Gaps = 47/440 (10%)
Query: 1 MATPK-PI-SPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRA 58
++ PK PI SP R+ L+ SQ DP +A ++F + Q N FRHS S+ ++I KLGR
Sbjct: 41 VSNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPN---FRHSRSSHLILILKLGRG 97
Query: 59 KMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKS 118
+ ++ VL + H + + + + ++I YA A+ P + + TF + F K
Sbjct: 98 RYFNLIDDVLAK-HRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKH 156
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRS 178
N +L L++ R G+ +AFELF R
Sbjct: 157 LNRILDVLVSHR---------------------------------GYLQKAFELFKSSRL 183
Query: 179 RGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELS 238
GV P+ ++ L+ C N L A++L +M E + V Y LI+G C+ G+++
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKML-ERDVVPDVDSYKILIQGFCRKGQVN 242
Query: 239 WAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMI 298
A + D+M+ KG D Y TL+N+L + + EA ++L M+ GC + V N MI
Sbjct: 243 GAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMI 302
Query: 299 GEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCA 356
+CRE+ +A ++LD + G P+ + Y +G LC +G + E +M +G +
Sbjct: 303 LGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFS 362
Query: 357 PDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTV 416
P L G C + + EA V++ +M G S + +C E E +
Sbjct: 363 PHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLF 422
Query: 417 LSD-----LTSKGKICNEGI 431
L D +T +I + GI
Sbjct: 423 LEDAVKEEITGDTRIVDVGI 442
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 179/345 (51%), Gaps = 10/345 (2%)
Query: 118 SFNTLLHALLTCRQFD-AVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEM 176
++N ++ +L + + D A+ L + P TY ILI A+ L G D A +L DEM
Sbjct: 195 TYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM 254
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC---VTIYTNLIKGVCK 233
SRG++PD T+ T+I +C+ + AFE M R +L+GC V Y L++ +
Sbjct: 255 LSRGLKPDMFTYNTIIRGMCKEGMVDRAFE----MVRNLELKGCEPDVISYNILLRALLN 310
Query: 234 IGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
G+ ++ +M + + Y+ LI L + GK EEA+ +L+ M+E G ++ +
Sbjct: 311 QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 370
Query: 294 CNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
+ +I +CRE + A L+ + +G PD++ YN L LCK GK +A+++F +
Sbjct: 371 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 430
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
GC+P+ +Y T+F L A+ ++ EMM G P N+ +S LC+EG +
Sbjct: 431 EVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVD 490
Query: 412 LLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+L D+ S + +++VL CK ++ ++ +L+++V
Sbjct: 491 EAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMV 535
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 189/378 (50%), Gaps = 8/378 (2%)
Query: 80 PEPLLC-HVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTEL 138
P+ +LC +I + R +AV+ + F Q + ++N L++ + D T +
Sbjct: 122 PDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRV 180
Query: 139 A--ARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLC 196
R+ +F +PD TYNI+I + C RG D A ++ +++ S +P T+ LI
Sbjct: 181 LDRMRSKDF-SPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATM 239
Query: 197 ENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDA 256
+ EA +L +EM L+ + Y +I+G+CK G + AF + + KG + D
Sbjct: 240 LEGGVDEALKLMDEMLSR-GLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDV 298
Query: 257 ALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDG 316
YN L+ AL GK EE +++ +M C+ N VT +++I CR+ EEA +L
Sbjct: 299 ISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKL 358
Query: 317 VE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQ 374
++ G+ PD Y+ + C+EG+ A++ M GC PD+V Y T+ LC+ +
Sbjct: 359 MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGK 418
Query: 375 FREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDV 434
+A+ + ++ G +P S + N S L G+ ++ ++ S G +E ++
Sbjct: 419 ADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNS 478
Query: 435 VLSMVCKPEKVPESFELL 452
++S +C+ V E+FELL
Sbjct: 479 MISCLCREGMVDEAFELL 496
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 144/336 (42%), Gaps = 38/336 (11%)
Query: 122 LLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGV 181
L+ T R + +FG PD YN LI C D A + D MRS+
Sbjct: 130 LIKGFFTLRNIPKAVRVMEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDF 189
Query: 182 RPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAF 241
PD T+ +I LC G+L A
Sbjct: 190 SPDTVTYNIMIGSLCSR------------------------------------GKLDLAL 213
Query: 242 RIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEY 301
++ ++++ + Y LI A G +EAL++++EM G + + T N +I
Sbjct: 214 KVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM 273
Query: 302 CRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDV 359
C+E + A+ ++ +E G +PDVI YN+ L L +GKW E L M C P+V
Sbjct: 274 CKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNV 333
Query: 360 VTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSD 419
VTY L LCR + EA+ +L M KG P + + + ++ C+EG ++ L
Sbjct: 334 VTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLET 393
Query: 420 LTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
+ S G + + ++ VL+ +CK K ++ E+ L
Sbjct: 394 MISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 144/333 (43%), Gaps = 43/333 (12%)
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIR 158
A++ + S CQ T+ ++ L+ A + D +L G PD TYN +IR
Sbjct: 212 ALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIR 271
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
C G DRAFE+ + +G PD ++ L+ L + E +L +MF E K +
Sbjct: 272 GMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE-KCD 330
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
V Y+ LI +C+ G++ A + M +KGL DA Y+ LI A + G+ + A+
Sbjct: 331 PNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEF 390
Query: 279 LEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--------------------- 317
LE M GC + V N ++ C+ ++A I +
Sbjct: 391 LETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWS 450
Query: 318 ----------------EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCA--PDV 359
G+ PD I YN + LC+EG EA +L DM R C P V
Sbjct: 451 SGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM--RSCEFHPSV 508
Query: 360 VTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
VTY + G C+ + +A+ VL+ M+ G P
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRP 541
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 140/299 (46%), Gaps = 4/299 (1%)
Query: 160 SCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEG 219
SC G+ + L + M +G PD LI + +A + E + +F +
Sbjct: 99 SCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVME-ILEKFG-QP 156
Query: 220 CVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVL 279
V Y LI G CK+ + A R+ D M K D YN +I +L GK + AL+VL
Sbjct: 157 DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVL 216
Query: 280 EEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKE 337
++ C+ +T ++I E +EA +++D + G+KPD+ YN + +CKE
Sbjct: 217 NQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKE 276
Query: 338 GKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNL 397
G A ++ ++ +GC PDV++Y L L ++ E ++ +M + P
Sbjct: 277 GMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTY 336
Query: 398 NAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ ++ LC++G E +L + KG + +D +++ C+ ++ + E L+ ++
Sbjct: 337 SILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 125/279 (44%), Gaps = 39/279 (13%)
Query: 112 CQRTLKSFNTLLHALLTCRQFDAVTELAARA-GEFGAPDACTYNILIRASCLRGHADRAF 170
C+ + S+N LL ALL +++ +L + E P+ TY+ILI C G + A
Sbjct: 294 CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAM 353
Query: 171 ELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKG 230
L M+ +G+ PD ++ LI C RL A E E M + L V Y ++
Sbjct: 354 NLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVN-YNTVLAT 412
Query: 231 VCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWN 290
+CK G+ A I ++ + G +++ YNT+ +AL+ +G K AL ++ EM G + +
Sbjct: 413 LCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPD 472
Query: 291 SVTCNVMIGEYCRENNFEEAYRILDGVEGVK--PDVIGYNVFLGWLCKE----------- 337
+T N MI CRE +EA+ +L + + P V+ YN+ L CK
Sbjct: 473 EITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLE 532
Query: 338 ------------------------GKWSEAMDLFHDMPR 352
G +EAM+L +D+ R
Sbjct: 533 SMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 87/191 (45%), Gaps = 1/191 (0%)
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGV-KPDVIG 326
++G E+L +LE M G + + C +I + N +A R+++ +E +PDV
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQPDVFA 160
Query: 327 YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMM 386
YN + CK + +A + M + +PD VTY + LC + A+ VL++++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 387 FKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVP 446
P + EG + ++ ++ S+G + ++ ++ +CK V
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 447 ESFELLDALVL 457
+FE++ L L
Sbjct: 281 RAFEMVRNLEL 291
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/356 (28%), Positives = 170/356 (47%), Gaps = 4/356 (1%)
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIR 158
A+ F + + C + ++NTL+ R+ D +L G P+ +YN++I
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
C G + EM RG D+ T+ TLI C+ +A + EM R L
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRH-GLT 342
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
V YT+LI +CK G ++ A D+M +GL + Y TL++ + G EA RV
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Query: 279 LEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCK 336
L EM + G + VT N +I +C E+A +L+ ++ G+ PDV+ Y+ L C+
Sbjct: 403 LREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR 462
Query: 337 EGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN 396
EA+ + +M +G PD +TY +L G C R+ +EA + +EM+ G P
Sbjct: 463 SYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFT 522
Query: 397 LNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
A ++ C EG+ E + +++ KG + + + V+++ + K + E+ LL
Sbjct: 523 YTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Score = 156 bits (394), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 187/416 (44%), Gaps = 12/416 (2%)
Query: 48 YDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQP---SRAVQTF 104
+DL++ R L +++ L +HL H +L + A R S A F
Sbjct: 137 FDLVVKSYSR---LSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 105 LSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLR 163
+ + + ++N L+ D L + G P+ TYN LI C
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 164 GHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLRE-AFELKEEMFREFKLEGCVT 222
D F+L M +G+ P+ ++ +I+ LC R++E +F L E R + L+
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVT- 312
Query: 223 IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEM 282
Y LIKG CK G A + EM++ GL Y +LI+++ KAG A+ L++M
Sbjct: 313 -YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 283 REGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKW 340
R G N T ++ + ++ EAYR+L + G P V+ YN + C GK
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 341 SEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAF 400
+A+ + DM +G +PDVV+Y T+ G CR EA+ V EM+ KG P + ++
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491
Query: 401 VSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ C++ + + ++ G +E + +++ C + ++ +L + +V
Sbjct: 492 IQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 163/330 (49%), Gaps = 6/330 (1%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEM 176
++NTL+ F + A G P TY LI + C G+ +RA E D+M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
R RG+ P++ T+ TL+ + + EA+ + EM + V Y LI G C G+
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM-NDNGFSPSVVTYNALINGHCVTGK 430
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
+ A + ++M +KGL D Y+T+++ ++ +EALRV EM E G + +++T +
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490
Query: 297 MIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
+I +C + +EA + + + G+ PD Y + C EG +A+ L ++M +G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLS 414
PDVVTY L +GL + + REA +L ++ ++ P + + E C F+ +
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLI-ENCSNIEFKSVV 609
Query: 415 TVLSDLTSKGKICN-EGIWDVVLSMVCKPE 443
+++ KG + + +++ +L KP+
Sbjct: 610 SLIKGFCMKGMMTEADQVFESMLGKNHKPD 639
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/427 (22%), Positives = 182/427 (42%), Gaps = 55/427 (12%)
Query: 44 SLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQT 103
+L+SY+++I L R + E+ VL +++ + + E +I Y + +A+
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMN-RRGYSLDEVTYNTLIKGYCKEGNFHQALVM 332
Query: 104 FLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCL 162
+ ++ ++ +L+H++ + E + G P+ TY L+
Sbjct: 333 HAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQ 392
Query: 163 RGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVT 222
+G+ + A+ + EM G P T+ LI+ C ++ +A + E+M +E L V
Sbjct: 393 KGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM-KEKGLSPDVV 451
Query: 223 IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEM 282
Y+ ++ G C+ ++ A R+K EMV+KG+K D Y++LI + + +EA + EEM
Sbjct: 452 SYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Query: 283 REGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWL------ 334
G + T +I YC E + E+A ++ + + +GV PDV+ Y+V + L
Sbjct: 512 LRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRT 571
Query: 335 --------------------------------------------CKEGKWSEAMDLFHDM 350
C +G +EA +F M
Sbjct: 572 REAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESM 631
Query: 351 PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNF 410
+ PD Y + G CR R+A + EM+ G+ + + A V L +EG
Sbjct: 632 LGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKV 691
Query: 411 ELLSTVL 417
L++V+
Sbjct: 692 NELNSVI 698
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 108/230 (46%), Gaps = 16/230 (6%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD TY LI A C+ G ++A +L +EM +GV PD T+ LI+ L + SR REA L
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577
Query: 208 KEEMFREFKLEGCVTIYT--------------NLIKGVCKIGELSWAFRIKDEMVKKGLK 253
++F E + VT +T +LIKG C G ++ A ++ + M+ K K
Sbjct: 578 LLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHK 637
Query: 254 LDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRI 313
D YN +I+ +AG +A + +EM + G ++VT ++ +E E +
Sbjct: 638 PDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSV 697
Query: 314 LDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVT 361
+ V + V + +EG +D+ +M + G P+ ++
Sbjct: 698 IVHVLRSCELSEAEQAKVLVEINHREGNMDVVLDVLAEMAKDGFLPNGIS 747
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 165 bits (418), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 215/463 (46%), Gaps = 20/463 (4%)
Query: 1 MATPKPISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKM 60
+++PKP++ L ++ S+K+ + + + + R S + +DL++ + +M
Sbjct: 115 LSSPKPVTQL-LKEVVTSRKN---SIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRM 170
Query: 61 LPEMEQVLHQLHLDTRHRVPEPLLC-HVITFYARARQPSRAVQTFLSIPSFRCQRTLKSF 119
+ E + + + + P+ C H++T +R + A + + + + +F
Sbjct: 171 VDEAIECFYLMK--EKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTF 228
Query: 120 NTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRS 178
N +++ L + FG P TYN L++ LRG + A + EM+S
Sbjct: 229 NIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKS 288
Query: 179 RGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCV---TIYTNLIKGVCKIG 235
+G +PD T+ ++ +C R E+ RE K G V Y LI+G G
Sbjct: 289 KGFQPDMQTYNPILSWMCNEGR-------ASEVLREMKEIGLVPDSVSYNILIRGCSNNG 341
Query: 236 ELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCN 295
+L AF +DEMVK+G+ YNTLI+ LF K E A ++ E+RE G +SVT N
Sbjct: 342 DLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYN 401
Query: 296 VMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR 353
++I YC+ + ++A+ + D + +G++P Y + LC++ K EA +LF + +
Sbjct: 402 ILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGK 461
Query: 354 GCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELL 413
G PD+V TL DG C A +L EM P N + LC EG FE
Sbjct: 462 GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEA 521
Query: 414 STVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
++ ++ +G + ++ ++S K +F + D ++
Sbjct: 522 RELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEML 564
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 101/324 (31%), Positives = 164/324 (50%), Gaps = 13/324 (4%)
Query: 113 QRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFE 171
Q ++++N +L + C + A +E+ E G PD+ +YNILIR G + AF
Sbjct: 292 QPDMQTYNPILSWM--CNEGRA-SEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFA 348
Query: 172 LFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCV---TIYTNLI 228
DEM +G+ P T+ TLIH L +++ A E + RE + +G V Y LI
Sbjct: 349 YRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAA----EILIREIREKGIVLDSVTYNILI 404
Query: 229 KGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCE 288
G C+ G+ AF + DEM+ G++ Y +LI L + K EA + E++ G +
Sbjct: 405 NGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMK 464
Query: 289 WNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDL 346
+ V N ++ +C N + A+ +L ++ + PD + YN + LC EGK+ EA +L
Sbjct: 465 PDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAREL 524
Query: 347 FHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQ 406
+M RRG PD ++Y TL G + + A +V DEM+ G+ P NA + L +
Sbjct: 525 MGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSK 584
Query: 407 EGNFELLSTVLSDLTSKGKICNEG 430
EL +L ++ S+G + N+
Sbjct: 585 NQEGELAEELLREMKSEGIVPNDS 608
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 113/440 (25%), Positives = 195/440 (44%), Gaps = 42/440 (9%)
Query: 3 TPKPISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLP 62
T KP + L+ +DP A LF Q FRH SY +I KL +++
Sbjct: 43 TRKPWEEVPFLTDLKEIEDPEEALSLF----HQYQEMGFRHDYPSYSSLIYKLAKSRNFD 98
Query: 63 EMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTL 122
++Q+L + R E L +I Y +A +A+ F I SF C RT++S NTL
Sbjct: 99 AVDQILRLVRYRNV-RCRESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTL 157
Query: 123 LHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVR 182
++ L+ G ++A FD + +R
Sbjct: 158 INVLVD----------------------------------NGELEKAKSFFDGAKDMRLR 183
Query: 183 PDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFR 242
P+ +F LI + A ++ +EM E +++ V Y +LI +C+ ++ A
Sbjct: 184 PNSVSFNILIKGFLDKCDWEAACKVFDEML-EMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 243 IKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYC 302
+ ++M+KK ++ +A + L+ L G+ EA +++ +M GC+ V +++ +
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 303 RENNFEEAYRILDGVEG--VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVV 360
+ +EA +L ++ +KPDV+ YN+ + LC E + EA + +M +GC P+
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA 362
Query: 361 TYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDL 420
TYR + DG CR F + VL+ M+ + P V+ L + GN + VL +
Sbjct: 363 TYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVM 422
Query: 421 TSKGKICNEGIWDVVLSMVC 440
K G W +LS +C
Sbjct: 423 GKKNLSFGSGAWQNLLSDLC 442
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 140/310 (45%), Gaps = 3/310 (0%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
D +Y+ LI + D ++ +R R VR ++ F LI + + +A ++
Sbjct: 80 DYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVF 139
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
++ F + LI + GEL A D L+ ++ +N LI
Sbjct: 140 HKI-TSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLD 198
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIG 326
E A +V +EM E + + VT N +IG CR ++ +A +L+ + + ++P+ +
Sbjct: 199 KCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVT 258
Query: 327 YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMM 386
+ + + LC +G+++EA L DM RGC P +V Y L L + + EA ++L EM
Sbjct: 259 FGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMK 318
Query: 387 FKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVP 446
+ P N V+ LC E VL+++ KG N + +++ C+ E
Sbjct: 319 KRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFD 378
Query: 447 ESFELLDALV 456
+L+A++
Sbjct: 379 SGLNVLNAML 388
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 107/341 (31%), Positives = 158/341 (46%), Gaps = 10/341 (2%)
Query: 98 SRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNIL 156
S A + F I Q T+ SFNTL++ D L + + PD TY+ L
Sbjct: 257 SDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSAL 316
Query: 157 IRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFK 216
I A C D A LFDEM RG+ P+ F TLIH N + E ++M +
Sbjct: 317 INALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSK-G 375
Query: 217 LEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEAL 276
L+ + +Y L+ G CK G+L A I D M+++GL+ D Y TLI+ + G E AL
Sbjct: 376 LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETAL 435
Query: 277 RVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWL 334
+ +EM + G E + V + ++ C+E +A R L + G+KPD + Y + +
Sbjct: 436 EIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAF 495
Query: 335 CKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLS 394
CK+G L +M G P VVTY L +GLC+ Q + A ++LD M+ G P
Sbjct: 496 CKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDD 555
Query: 395 KNLNAFVSELCQEGNFELLST------VLSDLTSKGKICNE 429
N + + N +++DL S I NE
Sbjct: 556 ITYNTLLEGHHRHANSSKRYIQKPEIGIVADLASYKSIVNE 596
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 149/309 (48%), Gaps = 9/309 (2%)
Query: 130 RQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFG 189
+ FD +T+ + + P ++N LI C G+ D F L +M RPD T+
Sbjct: 261 KVFDEITKRSLQ------PTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYS 314
Query: 190 TLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVK 249
LI+ LC+ +++ A L +EM + + V I+T LI G + GE+ +M+
Sbjct: 315 ALINALCKENKMDGAHGLFDEMCKRGLIPNDV-IFTTLIHGHSRNGEIDLMKESYQKMLS 373
Query: 250 KGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEE 309
KGL+ D LYNTL+N K G A +++ M G + +T +I +CR + E
Sbjct: 374 KGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVET 433
Query: 310 AYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFD 367
A I ++ G++ D +G++ + +CKEG+ +A +M R G PD VTY + D
Sbjct: 434 ALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMD 493
Query: 368 GLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKIC 427
C+ + +L EM G+ P N ++ LC+ G + +L + + G +
Sbjct: 494 AFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVP 553
Query: 428 NEGIWDVVL 436
++ ++ +L
Sbjct: 554 DDITYNTLL 562
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 155/307 (50%), Gaps = 3/307 (0%)
Query: 152 TYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM 211
+NIL+ C G+ A ++FDE+ R ++P +F TLI+ C+ L E F LK +M
Sbjct: 242 VFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQM 301
Query: 212 FREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGK 271
+ + V Y+ LI +CK ++ A + DEM K+GL + ++ TLI+ + G+
Sbjct: 302 EKS-RTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360
Query: 272 KEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNV 329
+ ++M G + + V N ++ +C+ + A I+DG+ G++PD I Y
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTT 420
Query: 330 FLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKG 389
+ C+ G A+++ +M + G D V + L G+C+ + +A L EM+ G
Sbjct: 421 LIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAG 480
Query: 390 YAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESF 449
P + C++G+ + +L ++ S G + + ++V+L+ +CK ++ +
Sbjct: 481 IKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNAD 540
Query: 450 ELLDALV 456
LLDA++
Sbjct: 541 MLLDAML 547
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 106/230 (46%), Gaps = 2/230 (0%)
Query: 221 VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLE 280
V ++ L+ CK G +S A ++ DE+ K+ L+ +NTLIN K G +E R+
Sbjct: 240 VYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKH 299
Query: 281 EMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEG 338
+M + + T + +I C+EN + A+ + D + G+ P+ + + + + G
Sbjct: 300 QMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNG 359
Query: 339 KWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLN 398
+ + + M +G PD+V Y TL +G C+ A ++D M+ +G P
Sbjct: 360 EIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYT 419
Query: 399 AFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPES 448
+ C+ G+ E + ++ G + + ++ +CK +V ++
Sbjct: 420 TLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDA 469
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 98/227 (43%), Gaps = 13/227 (5%)
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFGA------PDACTYNILIRASCLRGHADRAFEL 172
+NTL++ C+ D V AAR G PD TY LI C G + A E+
Sbjct: 383 YNTLVNGF--CKNGDLV---AARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEI 437
Query: 173 FDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVC 232
EM G+ D+ F L+ +C+ R+ +A EM R VT YT ++ C
Sbjct: 438 RKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVT-YTMMMDAFC 496
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
K G+ F++ EM G YN L+N L K G+ + A +L+ M G + +
Sbjct: 497 KKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDI 556
Query: 293 TCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGK 339
T N ++ + R N + Y I G+ D+ Y + L + K
Sbjct: 557 TYNTLLEGHHRHANSSKRY-IQKPEIGIVADLASYKSIVNELDRASK 602
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 3/310 (0%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD Y LI C RG A + F EM SR + PD T+ +I C+ + EA +L
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
EMF + LE +T LI G CK G + AFR+ + M++ G + Y TLI+ L
Sbjct: 409 FHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVI 325
K G + A +L EM + G + N T N ++ C+ N EEA +++ E G+ D +
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
Y + CK G+ +A ++ +M +G P +VT+ L +G C + +L+ M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKV 445
+ KG AP + N+ V + C N + + + D+ S+G + ++ ++ CK +
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 446 PESFELLDAL 455
E++ L +
Sbjct: 648 KEAWFLFQEM 657
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 151/314 (48%), Gaps = 9/314 (2%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
PD TY +I C G A +LF EM +G+ PD TF LI+ C+ +++AF
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442
Query: 207 LKEEMFREFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLI 263
+ M + GC V YT LI G+CK G+L A + EM K GL+ + YN+++
Sbjct: 443 VHNHMIQA----GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 264 NALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVK 321
N L K+G EEA++++ E G ++VT ++ YC+ ++A IL + +G++
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 322 PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVV 381
P ++ +NV + C G + L + M +G AP+ T+ +L C + A +
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 382 LDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCK 441
+M +G P K V C+ N + + ++ KG + + V++ K
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 442 PEKVPESFELLDAL 455
+K E+ E+ D +
Sbjct: 679 RKKFLEAREVFDQM 692
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 154/326 (47%), Gaps = 4/326 (1%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEM 176
S++T+++ + D V +L G P++ Y +I C A E F EM
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
+G+ PD + TLI C+ +R A + EM + V YT +I G C+IG+
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGD 401
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
+ A ++ EM KGL+ D+ + LIN KAG ++A RV M + GC N VT
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 297 MIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
+I C+E + + A +L + G++P++ YN + LCK G EA+ L + G
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLS 414
D VTY TL D C+ + +A +L EM+ KG P N ++ C G E
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 415 TVLSDLTSKGKICNEGIWDVVLSMVC 440
+L+ + +KG N ++ ++ C
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYC 607
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 137/288 (47%), Gaps = 3/288 (1%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD+ T+ LI C GH AF + + M G P+ T+ TLI LC+ L A EL
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
EM++ L+ + Y +++ G+CK G + A ++ E GL D Y TL++A
Sbjct: 479 LHEMWK-IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVI 325
K+G+ ++A +L+EM G + VT NV++ +C E+ ++L+ + +G+ P+
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
+N + C A ++ DM RG PD TY L G C+ R +EA + EM
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWD 433
KG++ + + + F V + +G ++ I+D
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 152/310 (49%), Gaps = 3/310 (0%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
+ +YNI+I C G A L M +G PD ++ T+++ C L + ++L
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
E M R+ L+ IY ++I +C+I +L+ A EM+++G+ D +Y TLI+ K
Sbjct: 305 EVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIG 326
G A + EM + +T +I +C+ + EA ++ + +G++PD +
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 327 YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMM 386
+ + CK G +A + + M + GC+P+VVTY TL DGLC+ A +L EM
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 387 FKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVP 446
G P N+ V+ LC+ GN E ++ + + G + + ++ CK ++
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 447 ESFELLDALV 456
++ E+L ++
Sbjct: 544 KAQEILKEML 553
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 143/289 (49%), Gaps = 9/289 (3%)
Query: 169 AFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC---VTIYT 225
A +F E GV + A++ +IH +C+ R++EA L M +L+G V Y+
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLM----ELKGYTPDVISYS 285
Query: 226 NLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREG 285
++ G C+ GEL +++ + M +KGLK ++ +Y ++I L + K EA EM
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 286 GCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VKPDVIGYNVFLGWLCKEGKWSEA 343
G ++V +I +C+ + A + + + PDV+ Y + C+ G EA
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 344 MDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSE 403
LFH+M +G PD VT+ L +G C+ ++A V + M+ G +P +
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 404 LCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
LC+EG+ + + +L ++ G N ++ +++ +CK + E+ +L+
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 102/472 (21%), Positives = 191/472 (40%), Gaps = 56/472 (11%)
Query: 7 ISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLI-----ITKLGRAKML 61
+S FR L S + ++F + P ++ P + S+ + + + KL RA+ L
Sbjct: 15 LSSFRNFIQLFSLQSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPL 74
Query: 62 PEMEQVLHQLHLDTRHRVPEPLLC-----HVITFYARARQPSRAVQTFLSIPSFRCQRTL 116
R +P C H+I + + R V F R L
Sbjct: 75 ---------------RRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSNL 119
Query: 117 KSFNTLLHALLTCRQFDAVTELAARAGE---FGAPDACT--YNILIRASCLRGHADRAFE 171
+S ++H + + L + E D+ +++L+ G R F+
Sbjct: 120 ESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFD 179
Query: 172 LFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFRE---FKLEGCVTIYTNLI 228
+F ++ L + LREA + E+M ++ C T L
Sbjct: 180 VFFQV------------------LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLS 221
Query: 229 KGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCE 288
K K FR E + G+ + A YN +I+ + + G+ +EA +L M G
Sbjct: 222 KDCYKTATAIIVFR---EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYT 278
Query: 289 WNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDL 346
+ ++ + ++ YCR ++ +++++ ++ G+KP+ Y +G LC+ K +EA +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 347 FHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQ 406
F +M R+G PD V Y TL DG C+ R A EM + P A +S CQ
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 407 EGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALVLA 458
G+ + ++ KG + + +++ CK + ++F + + ++ A
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 91 YARARQPSRAVQTFLSIPSFRCQRTLKSFNTL-----LHALLTCRQFDAVTELAARAGEF 145
Y ++ + +A + + Q T+ +FN L LH +L D L +
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE----DGEKLLNWMLAKG 591
Query: 146 GAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
AP+A T+N L++ C+R + A ++ +M SRGV PD T+ L+ C+ ++EA+
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 206 ELKEEMFREFKLEG---CVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTL 262
L F+E K +G V+ Y+ LIKG K + A + D+M ++GL D +++
Sbjct: 652 FL----FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFF 707
Query: 263 INALFKAGKKEEALRVLEEMRE 284
+ +K + + + ++E+ E
Sbjct: 708 SDTKYKGKRPDTIVDPIDEIIE 729
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 151/310 (48%), Gaps = 3/310 (0%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD Y LI C RG A + F EM SR + PD T+ +I C+ + EA +L
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
EMF + LE +T LI G CK G + AFR+ + M++ G + Y TLI+ L
Sbjct: 409 FHEMFCK-GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVI 325
K G + A +L EM + G + N T N ++ C+ N EEA +++ E G+ D +
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTV 527
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
Y + CK G+ +A ++ +M +G P +VT+ L +G C + +L+ M
Sbjct: 528 TYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWM 587
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKV 445
+ KG AP + N+ V + C N + + + D+ S+G + ++ ++ CK +
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 446 PESFELLDAL 455
E++ L +
Sbjct: 648 KEAWFLFQEM 657
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 151/314 (48%), Gaps = 9/314 (2%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
PD TY +I C G A +LF EM +G+ PD TF LI+ C+ +++AF
Sbjct: 383 TPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFR 442
Query: 207 LKEEMFREFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLI 263
+ M + GC V YT LI G+CK G+L A + EM K GL+ + YN+++
Sbjct: 443 VHNHMIQA----GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV 498
Query: 264 NALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVK 321
N L K+G EEA++++ E G ++VT ++ YC+ ++A IL + +G++
Sbjct: 499 NGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQ 558
Query: 322 PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVV 381
P ++ +NV + C G + L + M +G AP+ T+ +L C + A +
Sbjct: 559 PTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAI 618
Query: 382 LDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCK 441
+M +G P K V C+ N + + ++ KG + + V++ K
Sbjct: 619 YKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLK 678
Query: 442 PEKVPESFELLDAL 455
+K E+ E+ D +
Sbjct: 679 RKKFLEAREVFDQM 692
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 154/326 (47%), Gaps = 4/326 (1%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEM 176
S++T+++ + D V +L G P++ Y +I C A E F EM
Sbjct: 283 SYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEM 342
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
+G+ PD + TLI C+ +R A + EM + V YT +I G C+IG+
Sbjct: 343 IRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSR-DITPDVLTYTAIISGFCQIGD 401
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
+ A ++ EM KGL+ D+ + LIN KAG ++A RV M + GC N VT
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 297 MIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
+I C+E + + A +L + G++P++ YN + LCK G EA+ L + G
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAG 521
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLS 414
D VTY TL D C+ + +A +L EM+ KG P N ++ C G E
Sbjct: 522 LNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGE 581
Query: 415 TVLSDLTSKGKICNEGIWDVVLSMVC 440
+L+ + +KG N ++ ++ C
Sbjct: 582 KLLNWMLAKGIAPNATTFNSLVKQYC 607
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 137/288 (47%), Gaps = 3/288 (1%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD+ T+ LI C GH AF + + M G P+ T+ TLI LC+ L A EL
Sbjct: 419 PDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
EM++ L+ + Y +++ G+CK G + A ++ E GL D Y TL++A
Sbjct: 479 LHEMWK-IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVI 325
K+G+ ++A +L+EM G + VT NV++ +C E+ ++L+ + +G+ P+
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
+N + C A ++ DM RG PD TY L G C+ R +EA + EM
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWD 433
KG++ + + + F V + +G ++ I+D
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD 705
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 152/310 (49%), Gaps = 3/310 (0%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
+ +YNI+I C G A L M +G PD ++ T+++ C L + ++L
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
E M R+ L+ IY ++I +C+I +L+ A EM+++G+ D +Y TLI+ K
Sbjct: 305 EVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIG 326
G A + EM + +T +I +C+ + EA ++ + +G++PD +
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 327 YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMM 386
+ + CK G +A + + M + GC+P+VVTY TL DGLC+ A +L EM
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 387 FKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVP 446
G P N+ V+ LC+ GN E ++ + + G + + ++ CK ++
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 447 ESFELLDALV 456
++ E+L ++
Sbjct: 544 KAQEILKEML 553
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 143/289 (49%), Gaps = 9/289 (3%)
Query: 169 AFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC---VTIYT 225
A +F E GV + A++ +IH +C+ R++EA L M +L+G V Y+
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLM----ELKGYTPDVISYS 285
Query: 226 NLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREG 285
++ G C+ GEL +++ + M +KGLK ++ +Y ++I L + K EA EM
Sbjct: 286 TVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 286 GCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VKPDVIGYNVFLGWLCKEGKWSEA 343
G ++V +I +C+ + A + + + PDV+ Y + C+ G EA
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 344 MDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSE 403
LFH+M +G PD VT+ L +G C+ ++A V + M+ G +P +
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 404 LCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
LC+EG+ + + +L ++ G N ++ +++ +CK + E+ +L+
Sbjct: 466 LCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLV 514
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 102/472 (21%), Positives = 191/472 (40%), Gaps = 56/472 (11%)
Query: 7 ISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLI-----ITKLGRAKML 61
+S FR L S + ++F + P ++ P + S+ + + + KL RA+ L
Sbjct: 15 LSSFRNFIQLFSLQSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNVIKLRRAEPL 74
Query: 62 PEMEQVLHQLHLDTRHRVPEPLLC-----HVITFYARARQPSRAVQTFLSIPSFRCQRTL 116
R +P C H+I + + R V F R L
Sbjct: 75 ---------------RRSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSNL 119
Query: 117 KSFNTLLHALLTCRQFDAVTELAARAGE---FGAPDACT--YNILIRASCLRGHADRAFE 171
+S ++H + + L + E D+ +++L+ G R F+
Sbjct: 120 ESLCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDPRVFD 179
Query: 172 LFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFRE---FKLEGCVTIYTNLI 228
+F ++ L + LREA + E+M ++ C T L
Sbjct: 180 VFFQV------------------LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLS 221
Query: 229 KGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCE 288
K K FR E + G+ + A YN +I+ + + G+ +EA +L M G
Sbjct: 222 KDCYKTATAIIVFR---EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYT 278
Query: 289 WNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDL 346
+ ++ + ++ YCR ++ +++++ ++ G+KP+ Y +G LC+ K +EA +
Sbjct: 279 PDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEA 338
Query: 347 FHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQ 406
F +M R+G PD V Y TL DG C+ R A EM + P A +S CQ
Sbjct: 339 FSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQ 398
Query: 407 EGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALVLA 458
G+ + ++ KG + + +++ CK + ++F + + ++ A
Sbjct: 399 IGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQA 450
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 91 YARARQPSRAVQTFLSIPSFRCQRTLKSFNTL-----LHALLTCRQFDAVTELAARAGEF 145
Y ++ + +A + + Q T+ +FN L LH +L D L +
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE----DGEKLLNWMLAKG 591
Query: 146 GAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
AP+A T+N L++ C+R + A ++ +M SRGV PD T+ L+ C+ ++EA+
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
Query: 206 ELKEEMFREFKLEG---CVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTL 262
L F+E K +G V+ Y+ LIKG K + A + D+M ++GL D +++
Sbjct: 652 FL----FQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFF 707
Query: 263 INALFKAGKKEEALRVLEEMRE 284
+ +K + + + ++E+ E
Sbjct: 708 SDTKYKGKRPDTIVDPIDEIIE 729
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 160 bits (404), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 178/376 (47%), Gaps = 8/376 (2%)
Query: 50 LIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPS 109
+II+ LG+ + + + L D + +I+ +A + + AV F +
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDG-FSLDVYSYTSLISAFANSGRYREAVNVFKKMEE 236
Query: 110 FRCQRTLKSFNTLLHAL-LTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHAD 167
C+ TL ++N +L+ ++ +T L + G APDA TYN LI C RG
Sbjct: 237 DGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSLH 295
Query: 168 R-AFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTN 226
+ A ++F+EM++ G D+ T+ L+ ++ R +EA ++ EM + Y +
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLN-GFSPSIVTYNS 354
Query: 227 LIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGG 286
LI + G L A +K++M +KG K D Y TL++ +AGK E A+ + EEMR G
Sbjct: 355 LISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAG 414
Query: 287 CEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAM 344
C+ N T N I Y F E +I D + G+ PD++ +N L + G SE
Sbjct: 415 CKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474
Query: 345 DLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSEL 404
+F +M R G P+ T+ TL R F +A+ V M+ G P N ++ L
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAAL 534
Query: 405 CQEGNFELLSTVLSDL 420
+ G +E VL+++
Sbjct: 535 ARGGMWEQSEKVLAEM 550
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 134/296 (45%), Gaps = 10/296 (3%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
D I+I G A +F+ ++ G D ++ +LI + R REA +
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV- 230
Query: 209 EEMFREFKLEGC--VTIYTNLIKGVCKIGELSW--AFRIKDEMVKKGLKLDAALYNTLIN 264
F++ + +GC I N+I V W + ++M G+ DA YNTLI
Sbjct: 231 ---FKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT 287
Query: 265 ALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKP 322
+ +EA +V EEM+ G ++ VT N ++ Y + + +EA ++L+ + G P
Sbjct: 288 CCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSP 347
Query: 323 DVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVL 382
++ YN + ++G EAM+L + M +G PDV TY TL G R + A+ +
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIF 407
Query: 383 DEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSM 438
+EM G P NAF+ G F + + ++ G + W+ +L++
Sbjct: 408 EEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAV 463
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 134/293 (45%), Gaps = 4/293 (1%)
Query: 117 KSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDE 175
++FNTL+ A C F+ + R + G PD TYN ++ A G +++ ++ E
Sbjct: 490 ETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAE 549
Query: 176 MRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIG 235
M +P++ T+ +L+H + L EE++ +E + L+ K
Sbjct: 550 MEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGV-IEPRAVLLKTLVLVCSKCD 608
Query: 236 ELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCN 295
L A R E+ ++G D N++++ + +A VL+ M+E G + T N
Sbjct: 609 LLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYN 668
Query: 296 VMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR 353
++ + R +F ++ IL + +G+KPD+I YN + C+ + +A +F +M
Sbjct: 669 SLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS 728
Query: 354 GCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQ 406
G PDV+TY T F EA+ V+ M+ G P N+ V C+
Sbjct: 729 GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCK 781
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 88/379 (23%), Positives = 154/379 (40%), Gaps = 48/379 (12%)
Query: 64 MEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLL 123
M+Q +Q LD ++ +I+ + + S A F + + S+ +L+
Sbjct: 162 MKQKDYQSMLDNS------VVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLI 215
Query: 124 HALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHA-DRAFELFDEMRSRGV 181
A ++ + + E G P TYN+++ G ++ L ++M+S G+
Sbjct: 216 SAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGI 275
Query: 182 RPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSW-A 240
PD T+ TLI C CK G L A
Sbjct: 276 APDAYTYNTLI--TC-----------------------------------CKRGSLHQEA 298
Query: 241 FRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGE 300
++ +EM G D YN L++ K+ + +EA++VL EM G + VT N +I
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISA 358
Query: 301 YCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPD 358
Y R+ +EA + + + +G KPDV Y L + GK AM +F +M GC P+
Sbjct: 359 YARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPN 418
Query: 359 VVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLS 418
+ T+ +F E + + DE+ G +P N ++ Q G +S V
Sbjct: 419 ICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFK 478
Query: 419 DLTSKGKICNEGIWDVVLS 437
++ G + ++ ++S
Sbjct: 479 EMKRAGFVPERETFNTLIS 497
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/446 (20%), Positives = 175/446 (39%), Gaps = 40/446 (8%)
Query: 41 FRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPL-LCHVITFYARARQPSR 99
F S+++Y+ +I+ R ML E ++ +Q+ + P+ +++ + RA +
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMA--EKGTKPDVFTYTTLLSGFERAGKVES 402
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIR 158
A+ F + + C+ + +FN + +F + ++ G +PD T+N L+
Sbjct: 403 AMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLA 462
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMF------ 212
G +F EM+ G P++ TF TLI +A + M
Sbjct: 463 VFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTP 522
Query: 213 -------------REFKLEGCVTIYTNLIKGVCKIGELSW---------------AFRIK 244
R E + + G CK EL++ +
Sbjct: 523 DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLA 582
Query: 245 DEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRE 304
+E+ ++ A L TL+ K EA R E++E G + T N M+ Y R
Sbjct: 583 EEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRR 642
Query: 305 NNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTY 362
+A +LD ++ G P + YN + + + ++ ++ ++ +G PD+++Y
Sbjct: 643 QMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISY 702
Query: 363 RTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTS 422
T+ CR + R+A + EM G P N F+ + FE V+ +
Sbjct: 703 NTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK 762
Query: 423 KGKICNEGIWDVVLSMVCKPEKVPES 448
G N+ ++ ++ CK + E+
Sbjct: 763 HGCRPNQNTYNSIVDGYCKLNRKDEA 788
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/449 (20%), Positives = 180/449 (40%), Gaps = 44/449 (9%)
Query: 47 SYDLIITKLGRAKMLPEMEQVLHQLHLD--TRHRVPEPLLCHVITFYARARQPSRAVQTF 104
+Y+ +IT R + E QV ++ + +V L V Y ++ +P A++
Sbjct: 281 TYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDV---YGKSHRPKEAMKVL 337
Query: 105 LSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLR 163
+ ++ ++N+L+ A D EL + E G PD TY L+
Sbjct: 338 NEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERA 397
Query: 164 GHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTI 223
G + A +F+EMR+ G +P+ TF I + E ++ +E+ L +
Sbjct: 398 GKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI-NVCGLSPDIVT 456
Query: 224 YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMR 283
+ L+ + G S + EM + G + +NTLI+A + G E+A+ V M
Sbjct: 457 WNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML 516
Query: 284 EGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VKPDVIGY-------------- 327
+ G + T N ++ R +E++ ++L +E KP+ + Y
Sbjct: 517 DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIG 576
Query: 328 -------NVFLGWL--------------CKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLF 366
V+ G + K EA F ++ RG +PD+ T ++
Sbjct: 577 LMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMV 636
Query: 367 DGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKI 426
R + +A VLD M +G+ P N+ + + +F +L ++ +KG
Sbjct: 637 SIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIK 696
Query: 427 CNEGIWDVVLSMVCKPEKVPESFELLDAL 455
+ ++ V+ C+ ++ ++ + +
Sbjct: 697 PDIISYNTVIYAYCRNTRMRDASRIFSEM 725
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 115/233 (49%), Gaps = 5/233 (2%)
Query: 227 LIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGG 286
+I + K G +S A + + + + G LD Y +LI+A +G+ EA+ V ++M E G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 287 CEWNSVTCNVMIGEYCRENN-FEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKW-SE 342
C+ +T NV++ + + + + +++ + +G+ PD YN + CK G E
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLI-TCCKRGSLHQE 297
Query: 343 AMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVS 402
A +F +M G + D VTY L D + + +EA+ VL+EM+ G++P N+ +S
Sbjct: 298 AAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357
Query: 403 ELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
++G + + + + KG + + +LS + KV + + + +
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEM 410
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 19/287 (6%)
Query: 45 LLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTF 104
L +Y+ ++ L R M + E+VL ++ D R + E C ++ YA ++ +
Sbjct: 524 LSTYNTVLAALARGGMWEQSEKVLAEME-DGRCKPNELTYCSLLHAYANGKE----IGLM 578
Query: 105 LSIPSFRCQRTLKSFNTLLHAL-LTCRQFDAVTELAARA----GEFG-APDACTYNILIR 158
S+ ++ LL L L C + D + E A RA E G +PD T N ++
Sbjct: 579 HSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPE-AERAFSELKERGFSPDITTLNSMVS 637
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
R +A + D M+ RG P AT+ +L++ +SR + F EE+ RE +
Sbjct: 638 IYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYM---HSRSAD-FGKSEEILREILAK 693
Query: 219 GC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEA 275
G + Y +I C+ + A RI EM G+ D YNT I + EEA
Sbjct: 694 GIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEA 753
Query: 276 LRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKP 322
+ V+ M + GC N T N ++ YC+ N +EA ++ + + P
Sbjct: 754 IGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDP 800
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 181/365 (49%), Gaps = 4/365 (1%)
Query: 96 QPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYN 154
+ A+ F + R T+ F+ L A+ +Q+D V L + G A + T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 155 ILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFRE 214
I+I C AF ++ G P+ TF TLI+ LC R+ EA EL + M
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 215 FKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEE 274
+TI T L+ G+C G+ + A + D+MV+ G + +A Y ++N + K+G+
Sbjct: 188 GHKPDLITINT-LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 275 ALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLG 332
A+ +L +M E + ++V +++I C+ + + A+ + + +E G+ ++I YN+ +G
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 333 WLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
C G+W + L DM +R P+VVT+ L D + + REA + EM+ +G AP
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 393 LSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+ + + C+E + + + ++ + SKG N ++++++ CK ++ + EL
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426
Query: 453 DALVL 457
+ L
Sbjct: 427 RKMSL 431
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 170/345 (49%), Gaps = 4/345 (1%)
Query: 115 TLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELF 173
L + + +++ CR+ + + G P+ T++ LI CL G A EL
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 174 DEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCK 233
D M G +PD T TL++ LC + + EA L ++M E+ + Y ++ +CK
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV-EYGCQPNAVTYGPVLNVMCK 240
Query: 234 IGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
G+ + A + +M ++ +KLDA Y+ +I+ L K G + A + EM G N +T
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIIT 300
Query: 294 CNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
N++IG +C +++ ++L + + P+V+ ++V + KEGK EA +L +M
Sbjct: 301 YNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMI 360
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
RG APD +TY +L DG C+ +A ++D M+ KG P + N ++ C+ +
Sbjct: 361 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 420
Query: 412 LLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ ++ +G + + ++ ++ C+ K+ + EL +V
Sbjct: 421 DGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 465
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 112/449 (24%), Positives = 197/449 (43%), Gaps = 55/449 (12%)
Query: 48 YDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSI 107
YDL+ L K + E++ + H L+ L +I + R R+ A I
Sbjct: 104 YDLV---LALCKQM-ELKGIAHNLYT----------LSIMINCFCRCRKLCLAFSAMGKI 149
Query: 108 PSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHA 166
+ +F+TL++ L + EL R E G PD T N L+ CL G
Sbjct: 150 IKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKE 209
Query: 167 DRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMF-REFKLEGCVTIYT 225
A L D+M G +P+ T+G +++ +C++ + A EL +M R KL+ Y+
Sbjct: 210 AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA--VKYS 267
Query: 226 NLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEM--- 282
+I G+CK G L AF + +EM KG+ + YN LI AG+ ++ ++L +M
Sbjct: 268 IIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 283 -----------------REG---------------GCEWNSVTCNVMIGEYCRENNFEEA 310
+EG G +++T +I +C+EN+ ++A
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 311 YRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDG 368
+++D + +G P++ +N+ + CK + + ++LF M RG D VTY TL G
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQG 447
Query: 369 LCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICN 428
C + A + EM+ + P + LC G E + + +
Sbjct: 448 FCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELD 507
Query: 429 EGIWDVVLSMVCKPEKVPESFELLDALVL 457
GI+++++ +C KV ++++L +L L
Sbjct: 508 IGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 127/295 (43%), Gaps = 38/295 (12%)
Query: 152 TYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM 211
TYNILI C G D +L +M R + P+ TF LI + +LREA EL +EM
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM 359
Query: 212 FREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGK 271
+T YT+LI G CK L A ++ D MV KG + +N LIN KA +
Sbjct: 360 IHRGIAPDTIT-YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 418
Query: 272 KEEALRVLEEMR---------------EGGCEW--------------------NSVTCNV 296
++ L + +M +G CE N VT +
Sbjct: 419 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKI 478
Query: 297 MIGEYCRENNFEEAYRILDGVEGVKP--DVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
++ C E+A I + +E K D+ YN+ + +C K +A DLF +P +G
Sbjct: 479 LLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGN 409
P V TY + GLC+ EA ++ +M G+AP N + +G+
Sbjct: 539 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGD 593
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/374 (27%), Positives = 170/374 (45%), Gaps = 5/374 (1%)
Query: 88 ITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG- 146
I ++ R Q S A+ + ++ + N+LL+ + L + E G
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
PD T+ L+ A A L + M +G +PD T+G +I+ LC+ A
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
L +M + K+E V IY +I G+CK + AF + ++M KG+K D YN LI+ L
Sbjct: 237 LLNKM-EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVK---PD 323
G+ +A R+L +M E + V N +I + +E EA ++ D + K PD
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPD 355
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
V+ YN + CK + E M++F +M +RG + VTY TL G + R A +V
Sbjct: 356 VVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 415
Query: 384 EMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPE 443
+M+ G P N + LC GN E V + + + + ++ +CK
Sbjct: 416 QMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAG 475
Query: 444 KVPESFELLDALVL 457
KV + ++L +L L
Sbjct: 476 KVEDGWDLFCSLSL 489
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/491 (24%), Positives = 196/491 (39%), Gaps = 41/491 (8%)
Query: 1 MATPKPISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKM 60
M +P S L S F L ++ Q + H+L +Y + I R
Sbjct: 66 MVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQ 125
Query: 61 LPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFN 120
L +L ++ + + L ++ + + S AV + Q +F
Sbjct: 126 LSLALAILGKM-MKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFT 184
Query: 121 TLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRG--------------- 164
TL+H L + L R G PD TY +I C RG
Sbjct: 185 TLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKG 244
Query: 165 --------------------HADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREA 204
H D AF+LF++M ++G++PD T+ LI LC R +A
Sbjct: 245 KIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDA 304
Query: 205 FELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVK-KGLKLDAALYNTLI 263
L +M E + + + LI K G+L A ++ DEMVK K D YNTLI
Sbjct: 305 SRLLSDML-EKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLI 363
Query: 264 NALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVK 321
K + EE + V EM + G N+VT +I + + + + A + + +GV
Sbjct: 364 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 423
Query: 322 PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVV 381
PD++ YN+ L LC G A+ +F M +R D+VTY T+ + LC+ + + +
Sbjct: 424 PDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDL 483
Query: 382 LDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCK 441
+ KG P +S C++G E + ++ G + N G ++ ++ +
Sbjct: 484 FCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLR 543
Query: 442 PEKVPESFELL 452
S EL+
Sbjct: 544 DGDEAASAELI 554
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 159/356 (44%), Gaps = 3/356 (0%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
VI + +P A+ + + + + +NT++ L + D +L + G
Sbjct: 221 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 147 -APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
PD TYN LI C G A L +M + + PD F LI + +L EA
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
+L +EM + V Y LIKG CK + + EM ++GL + Y TLI+
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPD 323
F+A + A V ++M G + +T N+++ C N E A + + ++ +K D
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD 460
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
++ Y + LCK GK + DLF + +G P+VVTY T+ G CR EA +
Sbjct: 461 IVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFV 520
Query: 384 EMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMV 439
EM G P S N + ++G+ + ++ ++ S G + + +V +M+
Sbjct: 521 EMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 139/292 (47%), Gaps = 3/292 (1%)
Query: 167 DRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTN 226
D A LF +M P F L+ + + ++ L E+M + + + Y+
Sbjct: 57 DDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM-QNLGISHNLYTYSI 115
Query: 227 LIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGG 286
I C+ +LS A I +M+K G N+L+N + EA+ ++++M E G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 287 CEWNSVTCNVMIGEYCRENNFEEAYRILDG--VEGVKPDVIGYNVFLGWLCKEGKWSEAM 344
+ ++VT ++ + N EA +++ V+G +PD++ Y + LCK G+ A+
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 345 DLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSEL 404
+L + M + DVV Y T+ DGLC+++ +A + ++M KG P N +S L
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 405 CQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
C G + S +LSD+ K + ++ ++ K K+ E+ +L D +V
Sbjct: 296 CNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 155 bits (393), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 173/350 (49%), Gaps = 4/350 (1%)
Query: 112 CQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAF 170
C S++ L+H L + + L + GE G P TY +LI+A C RG D+AF
Sbjct: 262 CAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAF 321
Query: 171 ELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKG 230
LFDEM RG +P+ T+ LI LC + ++ EA + +M ++ +T Y LI G
Sbjct: 322 NLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVIT-YNALING 380
Query: 231 VCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWN 290
CK G + AF + M K+ K + +N L+ L + GK +A+ +L+ M + G +
Sbjct: 381 YCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPD 440
Query: 291 SVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFH 348
V+ NV+I CRE + AY++L + ++PD + + + CK+GK A
Sbjct: 441 IVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLG 500
Query: 349 DMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEG 408
M R+G + D VT TL DG+C+ + R+A+ +L+ ++ +LN + L +
Sbjct: 501 LMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGC 560
Query: 409 NFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALVLA 458
+ +L + G + + + ++ + + + SF +L+ + L+
Sbjct: 561 KVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLS 610
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/294 (32%), Positives = 146/294 (49%), Gaps = 10/294 (3%)
Query: 169 AFELFDEM-RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC---VTIY 224
A ++FD M + P+ ++ LIH LCE RL EAF LK++M + GC Y
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK----GCQPSTRTY 304
Query: 225 TNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMRE 284
T LIK +C G + AF + DEM+ +G K + Y LI+ L + GK EEA V +M +
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Query: 285 GGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSE 342
+ +T N +I YC++ A+ +L +E KP+V +N + LC+ GK +
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424
Query: 343 AMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVS 402
A+ L M G +PD+V+Y L DGLCR A +L M P A ++
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 403 ELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
C++G ++ S L + KG +E ++ VCK K ++ +L+ LV
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLV 538
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 133/270 (49%), Gaps = 2/270 (0%)
Query: 153 YNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMF 212
Y ++ A C G+ + A ++ G D +L+ C LR+A ++ + M
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 213 REFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKK 272
+E Y+ LI G+C++G L AF +KD+M +KG + Y LI AL G
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 273 EEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVF 330
++A + +EM GC+ N T V+I CR+ EEA + + + + P VI YN
Sbjct: 318 DKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNAL 377
Query: 331 LGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGY 390
+ CK+G+ A +L M +R C P+V T+ L +GLCR + +AV +L M+ G
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437
Query: 391 APLSKNLNAFVSELCQEGNFELLSTVLSDL 420
+P + N + LC+EG+ +LS +
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNTAYKLLSSM 467
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 133/307 (43%), Gaps = 6/307 (1%)
Query: 132 FDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTL 191
F+ +T + RA + P+ T+N L+ C G +A L M G+ PD ++ L
Sbjct: 391 FELLTVMEKRACK---PNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVL 447
Query: 192 IHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKG 251
I LC + A++L M F +E +T +I CK G+ A M++KG
Sbjct: 448 IDGLCREGHMNTAYKLLSSM-NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506
Query: 252 LKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAY 311
+ LD TLI+ + K GK +AL +LE + + + NV++ + +E
Sbjct: 507 ISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEEL 566
Query: 312 RILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGL 369
+L + G+ P V+ Y + L + G + + + M GC P+V Y + +GL
Sbjct: 567 AMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGL 626
Query: 370 CRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNE 429
C++ + EA +L M G +P V G + + + +G N+
Sbjct: 627 CQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELND 686
Query: 430 GIWDVVL 436
I+ +L
Sbjct: 687 RIYSSLL 693
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 102/235 (43%), Gaps = 42/235 (17%)
Query: 224 YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKE---------- 273
Y++L+ + K+ A+ M G + Y T++NAL K G E
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222
Query: 274 -------------------------EALRVLEEM-REGGCEWNSVTCNVMIGEYCRENNF 307
+AL+V + M +E C NSV+ +++I C
Sbjct: 223 KIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRL 282
Query: 308 EEAYRILD--GVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTL 365
EEA+ + D G +G +P Y V + LC G +A +LF +M RGC P+V TY L
Sbjct: 283 EEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVL 342
Query: 366 FDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGN----FELLSTV 416
DGLCR + EA V +M+ P NA ++ C++G FELL+ +
Sbjct: 343 IDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 151/359 (42%), Gaps = 31/359 (8%)
Query: 106 SIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRG 164
++ R T S N +L L + + + + G P TY L+ G
Sbjct: 536 TLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG 595
Query: 165 HADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIY 224
+F + + M+ G P+ + +I+ LC+ R+ EA +L M VT Y
Sbjct: 596 DITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVT-Y 654
Query: 225 TNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMRE 284
T ++KG G+L A MV++G +L+ +Y++L+ VL +
Sbjct: 655 TVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF-----------VLSQKGI 703
Query: 285 GGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFL-GWLCKEGKWSEA 343
E ++V+ + RE + E ++ VE + + G +FL LCKEG+ E+
Sbjct: 704 DNSEESTVSDIAL-----RETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDES 758
Query: 344 MDLFHDMPRRGC----APDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNA 399
DL ++ RG A D++ + C ++ + + ++ ++ G+ P K+
Sbjct: 759 NDLVQNVLERGVFLEKAMDII-----MESYCSKKKHTKCMELITLVLKSGFVPSFKSFCL 813
Query: 400 FVSELCQEGNFE-LLSTVLSDLTSKGKICNEGIWDVVLSMVCKPE--KVPESFELLDAL 455
+ L +EG+ E V+ LTS G + G+ V ++ E E +L+D L
Sbjct: 814 VIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLMEGDETGDCSEVIDLVDQL 872
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 166/343 (48%), Gaps = 8/343 (2%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFGAP-DACTYNILIRASCLRGHADRAFELFDEM 176
++NT+++A + R F V + + G + TY +L+ S G A +LFDEM
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
R RG+ D + +LI C ++ AF L +E+ E L Y LI GVCK+GE
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDEL-TEKGLSPSSYTYGALIDGVCKVGE 379
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
+ A + +EM KG+ + ++NTLI+ + G +EA + + M + G + + TCN
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNT 439
Query: 297 MIGEYCRENNFEEA----YRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPR 352
+ + R ++EA +R+++G GVK + Y + CKEG EA LF +M
Sbjct: 440 IASCFNRLKRYDEAKQWLFRMMEG--GVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSS 497
Query: 353 RGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFEL 412
+G P+ +TY + C+ + +EA + M G P S + + C N +
Sbjct: 498 KGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDE 557
Query: 413 LSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
+ S++ KG N + V++S + K K E+F L D +
Sbjct: 558 AMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEM 600
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 133/276 (48%), Gaps = 9/276 (3%)
Query: 154 NILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFR 213
+++ R G + +FD M +G+ D+ + ++ + R R +L E+FR
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERS--CIVFLVAAKKRRR--IDLCLEIFR 213
Query: 214 EFKLEGC-VTIY--TNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAG 270
G +T+Y T +++G+C+ GE+ + ++ E KG+K +A YNT+INA K
Sbjct: 214 RMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQR 273
Query: 271 KKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYN 328
VL+ M++ G +N VT +++ + +A ++ D + G++ DV Y
Sbjct: 274 DFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYT 333
Query: 329 VFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFK 388
+ W C++G A LF ++ +G +P TY L DG+C+ + A ++++EM K
Sbjct: 334 SLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSK 393
Query: 389 GYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
G N + C++G + S + + KG
Sbjct: 394 GVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKG 429
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 138/346 (39%), Gaps = 63/346 (18%)
Query: 170 FELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFRE-FKLEGCVTIYTNLI 228
F+L E S ++PD TL HRL N R E L + + F + + ++
Sbjct: 83 FKLLREFES-NLKPDLTAVVTLSHRLYSNRRFNEMRSLLNSVVNDGFYKRPVEELGSAMV 141
Query: 229 KGVCKI----------------------GELSWAFRIKDEMVKKGLKLD----------- 255
C I G R+ D MVKKGL +D
Sbjct: 142 D--CDISEEKFEFFEKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAA 199
Query: 256 ----------------------AALYN--TLINALFKAGKKEEALRVLEEMREGGCEWNS 291
+Y+ ++ L + G+ E++ ++++E G + +
Sbjct: 200 KKRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEA 259
Query: 292 VTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHD 349
T N +I Y ++ +F +L + +GV + + Y + + K GK S+A LF +
Sbjct: 260 YTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDE 319
Query: 350 MPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGN 409
M RG DV Y +L CR + A ++ DE+ KG +P S A + +C+ G
Sbjct: 320 MRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGE 379
Query: 410 FELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
+++++ SKG + +++ ++ C+ V E+ + D +
Sbjct: 380 MGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVM 425
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 88/193 (45%), Gaps = 5/193 (2%)
Query: 38 HRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQP 97
+ F+ + + + I + R K E +Q L ++ ++ ++ ++I Y +
Sbjct: 427 QKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM-MEGGVKLSTVSYTNLIDVYCKEGNV 485
Query: 98 SRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNIL 156
A + F+ + S Q ++N +++A + +L A G PD+ TY L
Sbjct: 486 EEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSL 545
Query: 157 IRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFRE-F 215
I C+ + D A LF EM +G+ + T+ +I L + + EAF L +EM R+ +
Sbjct: 546 IHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGY 605
Query: 216 KLEGCVTIYTNLI 228
++ +YT LI
Sbjct: 606 TIDN--KVYTALI 616
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 124/485 (25%), Positives = 210/485 (43%), Gaps = 53/485 (10%)
Query: 4 PKPISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPE 63
P+ ++P LS +L+ QK+P A +LF + + H+ Y +I LG++ + E
Sbjct: 7 PRVLTPSLLSQILKKQKNPVTALKLF--EEAKERFPSYGHNGSVYATMIDILGKSNRVLE 64
Query: 64 MEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLL 123
M+ V+ ++ D+ + + VI ++RA + A+ F S+ F C SF+TLL
Sbjct: 65 MKYVIERMKEDS-CECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLL 123
Query: 124 HALLTCRQFDAVTELAARA--GEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGV 181
++ + +A + + G N+L++ C +D A ++F EM +G
Sbjct: 124 QEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGC 183
Query: 182 RPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC---VTIYTNLIKGVCKIGELS 238
PD+ ++ L+ C +L EA L MF +G + +Y L+ +C GE+
Sbjct: 184 YPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVD 243
Query: 239 WAFRIKDEMVKKGLK---------------------------------------LDAALY 259
A I ++++KGLK LD+ Y
Sbjct: 244 DAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDS--Y 301
Query: 260 NTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDG--V 317
+ + LF+ GK E VL MR G E + CR +EA +++ +
Sbjct: 302 SAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMM 361
Query: 318 EG-VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR-GCAPDVVTYRTLFDGLCRWRQF 375
+G P V YNV + LC +GK EA+ M ++ C + TY+TL DGLCR QF
Sbjct: 362 QGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQF 421
Query: 376 REAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVV 435
EA V++EM+ K + P + + + LC L ++ S+ + +W +
Sbjct: 422 LEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Query: 436 LSMVC 440
VC
Sbjct: 482 AESVC 486
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 124/485 (25%), Positives = 210/485 (43%), Gaps = 53/485 (10%)
Query: 4 PKPISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPE 63
P+ ++P LS +L+ QK+P A +LF + + H+ Y +I LG++ + E
Sbjct: 7 PRVLTPSLLSQILKKQKNPVTALKLF--EEAKERFPSYGHNGSVYATMIDILGKSNRVLE 64
Query: 64 MEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLL 123
M+ V+ ++ D+ + + VI ++RA + A+ F S+ F C SF+TLL
Sbjct: 65 MKYVIERMKEDS-CECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLL 123
Query: 124 HALLTCRQFDAVTELAARA--GEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGV 181
++ + +A + + G N+L++ C +D A ++F EM +G
Sbjct: 124 QEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGC 183
Query: 182 RPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC---VTIYTNLIKGVCKIGELS 238
PD+ ++ L+ C +L EA L MF +G + +Y L+ +C GE+
Sbjct: 184 YPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVD 243
Query: 239 WAFRIKDEMVKKGLK---------------------------------------LDAALY 259
A I ++++KGLK LD+ Y
Sbjct: 244 DAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDS--Y 301
Query: 260 NTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDG--V 317
+ + LF+ GK E VL MR G E + CR +EA +++ +
Sbjct: 302 SAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMM 361
Query: 318 EG-VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR-GCAPDVVTYRTLFDGLCRWRQF 375
+G P V YNV + LC +GK EA+ M ++ C + TY+TL DGLCR QF
Sbjct: 362 QGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQF 421
Query: 376 REAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVV 435
EA V++EM+ K + P + + + LC L ++ S+ + +W +
Sbjct: 422 LEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Query: 436 LSMVC 440
VC
Sbjct: 482 AESVC 486
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 154 bits (390), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 163/341 (47%), Gaps = 4/341 (1%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEM 176
+F+TL++ + L R E PD T + LI CL+G A L D M
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
G +PD+ T+G +++RLC++ A +L +M E ++ V Y+ +I +CK G
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM-EERNIKASVVQYSIVIDSLCKDGS 260
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
A + +EM KG+K D Y++LI L GK ++ ++L EM + VT +
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 297 MIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
+I + +E EA + + + G+ PD I YN + CKE EA +F M +G
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKG 380
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLS 414
C PD+VTY L + C+ ++ + + + E+ KG P + N V CQ G
Sbjct: 381 CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAK 440
Query: 415 TVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
+ ++ S+G + + ++L +C ++ ++ E+ + +
Sbjct: 441 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKM 481
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 169/357 (47%), Gaps = 8/357 (2%)
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAP-DACTYNILIR 158
A+ F S+ R T FN L A+ +Q+D V G D T I+I
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
C + AF + G PD TF TL++ C R+ EA L + M +
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRP 173
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
VT+ T LI G+C G +S A + D MV+ G + D Y ++N L K+G AL +
Sbjct: 174 DLVTVST-LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 279 LEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCK 336
+M E + + V +++I C++ +F++A + + +E G+K DV+ Y+ +G LC
Sbjct: 233 FRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCN 292
Query: 337 EGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN 396
+GKW + + +M R PDVVT+ L D + + EA + +EM+ +G AP +
Sbjct: 293 DGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTIT 352
Query: 397 LNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGI--WDVVLSMVCKPEKVPESFEL 451
N+ + C+E + + + SKG C I + ++++ CK ++V + L
Sbjct: 353 YNSLIDGFCKENCLHEANQMFDLMVSKG--CEPDIVTYSILINSYCKAKRVDDGMRL 407
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 160/320 (50%), Gaps = 4/320 (1%)
Query: 140 ARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCEN 198
RA + G PD T++ L+ CL G A L D M RPD T TLI+ LC
Sbjct: 129 GRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLK 188
Query: 199 SRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAAL 258
R+ EA L + M E+ + Y ++ +CK G + A + +M ++ +K
Sbjct: 189 GRVSEALVLIDRMV-EYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQ 247
Query: 259 YNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE 318
Y+ +I++L K G ++AL + EM G + + VT + +IG C + +++ ++L +
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMI 307
Query: 319 G--VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFR 376
G + PDV+ ++ + KEGK EA +L+++M RG APD +TY +L DG C+
Sbjct: 308 GRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 377 EAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVL 436
EA + D M+ KG P + ++ C+ + + +++SKG I N ++ ++
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 437 SMVCKPEKVPESFELLDALV 456
C+ K+ + EL +V
Sbjct: 428 LGFCQSGKLNAAKELFQEMV 447
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/263 (31%), Positives = 128/263 (48%), Gaps = 9/263 (3%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
APD TYN LI C A ++FD M S+G PD T+ LI+ C+ R+ +
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406
Query: 207 LKEEMFREFKLEGCV---TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLI 263
L FRE +G + Y L+ G C+ G+L+ A + EMV +G+ Y L+
Sbjct: 407 L----FREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILL 462
Query: 264 NALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVK 321
+ L G+ +AL + E+M++ N++I C + ++A+ + + +GVK
Sbjct: 463 DGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVK 522
Query: 322 PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVV 381
PDV+ YNV +G LCK+G SEA LF M GC PD TY L +V +
Sbjct: 523 PDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVEL 582
Query: 382 LDEMMFKGYAPLSKNLNAFVSEL 404
++EM G++ S + + L
Sbjct: 583 IEEMKVCGFSADSSTIKMVIDML 605
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 162/372 (43%), Gaps = 4/372 (1%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
V+ ++ + A+ F + + ++ ++ ++ +L FD L G
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275
Query: 147 -APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
D TY+ LI C G D ++ EM R + PD TF LI + +L EA
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
EL EM +T Y +LI G CK L A ++ D MV KG + D Y+ LIN+
Sbjct: 336 ELYNEMITRGIAPDTIT-YNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPD 323
KA + ++ +R+ E+ G N++T N ++ +C+ A + + GV P
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
V+ Y + L LC G+ ++A+++F M + + Y + G+C + +A +
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC 514
Query: 384 EMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPE 443
+ KG P N + LC++G+ + + G ++ +++++
Sbjct: 515 SLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGS 574
Query: 444 KVPESFELLDAL 455
+ S EL++ +
Sbjct: 575 GLISSVELIEEM 586
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 140/310 (45%), Gaps = 9/310 (2%)
Query: 152 TYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM 211
+Y +R + + A +LF+ M P F +RLC + ++L
Sbjct: 37 SYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDF----NRLCSAVARTKQYDLVLGF 92
Query: 212 FREFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
+ +L G + T +I C+ +L +AF + K G + D ++TL+N
Sbjct: 93 CKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCL 152
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIG 326
G+ EA+ +++ M E + VT + +I C + EA ++D + G +PD +
Sbjct: 153 EGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVT 212
Query: 327 YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMM 386
Y L LCK G + A+DLF M R VV Y + D LC+ F +A+ + +EM
Sbjct: 213 YGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEME 272
Query: 387 FKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVP 446
KG ++ + LC +G ++ + +L ++ + I + + ++ + K K+
Sbjct: 273 MKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLL 332
Query: 447 ESFELLDALV 456
E+ EL + ++
Sbjct: 333 EAKELYNEMI 342
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 154 bits (390), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 186/407 (45%), Gaps = 8/407 (1%)
Query: 52 ITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFR 111
I K+ + ++ + + + L + H L I + R Q A+ +
Sbjct: 91 IAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL----INCFCRRSQLPLALAVLGKMMKLG 146
Query: 112 CQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAF 170
+ + + ++LL+ ++ L + G P+ T+N LI L A A
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 206
Query: 171 ELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKG 230
L D M ++G +PD T+G +++ LC+ AF L +M + KLE V IY +I G
Sbjct: 207 ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM-EQGKLEPGVLIYNTIIDG 265
Query: 231 VCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWN 290
+CK + A + EM KG++ + Y++LI+ L G+ +A R+L +M E +
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 291 SVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFH 348
T + +I + +E EA ++ D + + P ++ Y+ + C + EA +F
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 349 DMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEG 408
M + C PDVVTY TL G C++++ E + V EM +G + N + L Q G
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 409 NFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
+ ++ + ++ S G N ++ +L +CK K+ ++ + + L
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 492
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 163/356 (45%), Gaps = 4/356 (1%)
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAP-DACTYNILIR 158
AV F + R ++ F+ LL A+ +FD V L + G P + TY+ILI
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
C R A + +M G P+ T +L++ C + R+ EA L ++MF
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
VT + LI G+ + S A + D MV KG + D Y ++N L K G + A +
Sbjct: 185 NTVT-FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 279 LEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCK 336
L +M +G E + N +I C+ + ++A + +E G++P+V+ Y+ + LC
Sbjct: 244 LNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCN 303
Query: 337 EGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN 396
G+WS+A L DM R PDV T+ L D + + EA + DEM+ + P
Sbjct: 304 YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVT 363
Query: 397 LNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
++ ++ C + + + SK + ++ ++ CK ++V E E+
Sbjct: 364 YSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419
Score = 147 bits (371), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 196/461 (42%), Gaps = 40/461 (8%)
Query: 26 FQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLC 85
F + ++ Q + H+ +Y ++I R LP VL ++ + + L
Sbjct: 97 FDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKM-MKLGYEPNIVTLS 155
Query: 86 HVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEF 145
++ Y +++ S AV + Q +FNTL+H L + L R
Sbjct: 156 SLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAK 215
Query: 146 G-APDACTYNILIRASCLRG-----------------------------------HADRA 169
G PD TY +++ C RG H D A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 170 FELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIK 229
LF EM ++G+RP+ T+ +LI LC R +A L +M E K+ V ++ LI
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI-ERKINPDVFTFSALID 334
Query: 230 GVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEW 289
K G+L A ++ DEMVK+ + Y++LIN + +EA ++ E M C
Sbjct: 335 AFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFP 394
Query: 290 NSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLF 347
+ VT N +I +C+ EE + + G+ + + YN+ + L + G A ++F
Sbjct: 395 DVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIF 454
Query: 348 HDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQE 407
+M G P+++TY TL DGLC+ + +A+VV + + P N + +C+
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKA 514
Query: 408 GNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPES 448
G E + +L+ KG + ++ ++S C+ E+
Sbjct: 515 GKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Score = 145 bits (367), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 143/294 (48%), Gaps = 3/294 (1%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD T++ LI A G A +L+DEM R + P T+ +LI+ C + RL EA ++
Sbjct: 324 PDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQM 383
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
E M + VT Y LIKG CK + + EM ++GL + YN LI LF
Sbjct: 384 FEFMVSKHCFPDVVT-YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLF 442
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVK--PDVI 325
+AG + A + +EM G N +T N ++ C+ E+A + + ++ K P +
Sbjct: 443 QAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIY 502
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
YN+ + +CK GK + DLF ++ +G PDVV Y T+ G CR EA + EM
Sbjct: 503 TYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMV 439
G P S N + ++G+ E + ++ ++ S G + +V +M+
Sbjct: 563 KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 179/401 (44%), Gaps = 24/401 (5%)
Query: 21 DPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVP 80
D +AF L LN Q P +L Y+ II L + K + + + ++ +T+ P
Sbjct: 236 DTDLAFNL-LNKMEQGKLEP---GVLIYNTIIDGLCKYKHMDDALNLFKEM--ETKGIRP 289
Query: 81 EPL----LCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQF---- 132
+ L + Y R SR + + + + +F+ L+ A + +
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIE---RKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 133 DAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLI 192
E+ R+ + P TY+ LI C+ D A ++F+ M S+ PD T+ TLI
Sbjct: 347 KLYDEMVKRSID---PSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 403
Query: 193 HRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGL 252
C+ R+ E E+ EM + L G Y LI+G+ + G+ A I EMV G+
Sbjct: 404 KGFCKYKRVEEGMEVFREMSQR-GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Query: 253 KLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYR 312
+ YNTL++ L K GK E+A+ V E ++ E T N+MI C+ E+ +
Sbjct: 463 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 522
Query: 313 IL--DGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLC 370
+ ++GVKPDV+ YN + C++G EA LF +M G P+ Y TL
Sbjct: 523 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 582
Query: 371 RWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
R + ++ EM G+A + + V+ + +G +
Sbjct: 583 RDGDREASAELIKEMRSCGFAGDASTI-GLVTNMLHDGRLD 622
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 124/458 (27%), Positives = 199/458 (43%), Gaps = 21/458 (4%)
Query: 15 LLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHL- 73
L+ ++DP +AF+ F F+HS+ SY ++ L A+M + VL ++ L
Sbjct: 115 LVELKEDPKLAFKFF---KWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVLS 171
Query: 74 -----------DTRHR-VPE-PLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFN 120
TR+ VP + + + A+Q F + FR +S N
Sbjct: 172 KADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCN 231
Query: 121 TLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEMRSR 179
LLH + D V GA P TYNI+I C G + A LF+EM+ R
Sbjct: 232 GLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFR 291
Query: 180 GVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSW 239
G+ PD T+ ++I + RL + EEM ++ E V Y LI CK G+L
Sbjct: 292 GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM-KDMCCEPDVITYNALINCFCKFGKLPI 350
Query: 240 AFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIG 299
EM GLK + Y+TL++A K G ++A++ +MR G N T +I
Sbjct: 351 GLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLID 410
Query: 300 EYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAP 357
C+ N +A+R+ + + GV+ +V+ Y + LC + EA +LF M G P
Sbjct: 411 ANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIP 470
Query: 358 DVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVL 417
++ +Y L G + + A+ +L+E+ +G P F+ LC E V+
Sbjct: 471 NLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVM 530
Query: 418 SDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
+++ G N I+ ++ K E LLD +
Sbjct: 531 NEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 151/346 (43%), Gaps = 39/346 (11%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD TYN LI C G E + EM+ G++P+ ++ TL+ C+ +++A +
Sbjct: 330 PDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKF 389
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+M R L YT+LI CKIG LS AFR+ +EM++ G++ + Y LI+ L
Sbjct: 390 YVDM-RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLC 448
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVI 325
A + +EA + +M G N + N +I + + N + A +L+ ++ G+KPD++
Sbjct: 449 DAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLL 508
Query: 326 GYNVFLGWLC-----------------------------------KEGKWSEAMDLFHDM 350
Y F+ LC K G +E + L +M
Sbjct: 509 LYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEM 568
Query: 351 PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFK-GYAPLSKNLNAFVSELCQEGN 409
VVT+ L DGLC+ + +AV + + G + A + LC++
Sbjct: 569 KELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQ 628
Query: 410 FELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
E +T+ + KG + + + ++ K V E+ L D +
Sbjct: 629 VEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 674
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/291 (29%), Positives = 140/291 (48%), Gaps = 16/291 (5%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
P+ TY LI A+C G+ AF L +EM GV + T+ LI LC+ R++EA
Sbjct: 399 VPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEA-- 456
Query: 207 LKEEMFREFKLEGCV---TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLI 263
EE+F + G + Y LI G K + A + +E+ +G+K D LY T I
Sbjct: 457 --EELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Query: 264 NALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVK 321
L K E A V+ EM+E G + NS+ ++ Y + N E +LD ++ ++
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574
Query: 322 PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR-GCAPDVVTYRTLFDGLCRWRQFREAVV 380
V+ + V + LCK S+A+D F+ + G + + + DGLC+ Q A
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 634
Query: 381 VLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGI 431
+ ++M+ KG P + A+ S + +GNF+ VL L + K+ G+
Sbjct: 635 LFEQMVQKGLVP---DRTAYTSLM--DGNFK-QGNVLEALALRDKMAEIGM 679
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 127/279 (45%), Gaps = 5/279 (1%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEM 176
++ L+ L + EL + G P+ +YN LI + DRA EL +E+
Sbjct: 439 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 498
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
+ RG++PD +GT I LC ++ A + EM +E ++ IYT L+ K G
Sbjct: 499 KGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEM-KECGIKANSLIYTTLMDAYFKSGN 557
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEM-REGGCEWNSVTCN 295
+ + DEM + +++ + LI+ L K +A+ + + G + N+
Sbjct: 558 PTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFT 617
Query: 296 VMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR 353
MI C++N E A + + + +G+ PD Y + K+G EA+ L M
Sbjct: 618 AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEI 677
Query: 354 GCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
G D++ Y +L GL Q ++A L+EM+ +G P
Sbjct: 678 GMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 132/284 (46%), Gaps = 6/284 (2%)
Query: 44 SLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPE-PLLCHVITFYARARQPSRAVQ 102
++++Y +I L A+ + E E++ ++ DT +P +I + +A+ RA++
Sbjct: 436 NVVTYTALIDGLCDAERMKEAEELFGKM--DTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 103 TFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASC 161
+ + L + T + L + + +A + E G ++ Y L+ A
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 162 LRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCV 221
G+ L DEM+ + TF LI LC+N + +A + + +F L+
Sbjct: 554 KSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANA 613
Query: 222 TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEE 281
I+T +I G+CK ++ A + ++MV+KGL D Y +L++ FK G EAL + ++
Sbjct: 614 AIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 673
Query: 282 MREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPD 323
M E G + + + ++ N ++A L+ + EG+ PD
Sbjct: 674 MAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPD 717
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 181/418 (43%), Gaps = 45/418 (10%)
Query: 80 PEPLLCHVITF----YARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHAL-LTCRQFDA 134
P L C+ + Y + S A + F + +++FN L++ L + DA
Sbjct: 164 PNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDA 223
Query: 135 VTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIH 193
+ L EF PD TYN +++A +G EL +M+ G+ P++ T+ L++
Sbjct: 224 LGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVY 283
Query: 194 RLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLK 253
C+ L+EAF++ E M + L T Y LI G+C G + + D M L+
Sbjct: 284 GYCKLGSLKEAFQIVELMKQTNVLPDLCT-YNILINGLCNAGSMREGLELMDAMKSLKLQ 342
Query: 254 LDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYR- 312
D YNTLI+ F+ G EA +++E+M G + N VT N+ + C+E E R
Sbjct: 343 PDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRK 402
Query: 313 ---ILD----------------------------------GVEGVKPDVIGYNVFLGWLC 335
++D G +G+K + I N L LC
Sbjct: 403 VKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALC 462
Query: 336 KEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSK 395
KE K EA +L + +RG D VTY TL G R + +A+ + DEM P
Sbjct: 463 KERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVS 522
Query: 396 NLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLD 453
N+ + LC G EL +L G + ++ ++ ++ CK +V ++FE +
Sbjct: 523 TFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYN 580
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 194/415 (46%), Gaps = 9/415 (2%)
Query: 46 LSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITF-YARARQPSRAVQTF 104
++Y+ I+ + + L +++++L L + VP + + + + Y + A Q
Sbjct: 241 VTYNTILKAMSKKGRLSDLKELL--LDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV 298
Query: 105 LSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLR 163
+ L ++N L++ L EL PD TYN LI
Sbjct: 299 ELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFEL 358
Query: 164 GHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK-EEMFREFKLEGCVT 222
G + A +L ++M + GV+ +Q T + LC+ + REA K +E+ +
Sbjct: 359 GLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEK-REAVTRKVKELVDMHGFSPDIV 417
Query: 223 IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEM 282
Y LIK K+G+LS A + EM +KG+K++ NT+++AL K K +EA +L
Sbjct: 418 TYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSA 477
Query: 283 REGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVK--PDVIGYNVFLGWLCKEGKW 340
+ G + VT +I + RE E+A + D ++ VK P V +N +G LC GK
Sbjct: 478 HKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKT 537
Query: 341 SEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAF 400
AM+ F ++ G PD T+ ++ G C+ + +A +E + + P + N
Sbjct: 538 ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNIL 597
Query: 401 VSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
++ LC+EG E + L + ++ + ++ ++S CK +K+ E+++LL +
Sbjct: 598 LNGLCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEM 651
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 133/279 (47%), Gaps = 4/279 (1%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
+PD TY+ LI+A G A E+ EM +G++ + T T++ LC+ +L EA
Sbjct: 413 SPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHN 472
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
L + + VT Y LI G + ++ A + DEM K + + +N+LI L
Sbjct: 473 LLNSAHKRGFIVDEVT-YGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGL 531
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDV 324
GK E A+ +E+ E G + T N +I YC+E E+A+ + KPD
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591
Query: 325 IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDE 384
N+ L LCKEG +A++ F+ + D VTY T+ C+ ++ +EA +L E
Sbjct: 592 YTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTMISAFCKDKKLKEAYDLLSE 650
Query: 385 MMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSK 423
M KG P N+F+S L ++G +L + K
Sbjct: 651 MEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGK 689
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/376 (26%), Positives = 159/376 (42%), Gaps = 71/376 (18%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD CTYNILI C G EL D M+S ++PD T+ TLI E EA +L
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 367
Query: 208 KEEM-------------------FREFKLEGC----------------VTIYTNLIKGVC 232
E+M +E K E + Y LIK
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYL 427
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
K+G+LS A + EM +KG+K++ NT+++AL K K +EA +L + G + V
Sbjct: 428 KVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEV 487
Query: 293 TCNVMIGEYCRENNFEEAYRILDGVEGVK--PDVIGYNVFLGWLCKEGKWSEAMDLFHDM 350
T +I + RE E+A + D ++ VK P V +N +G LC GK AM+ F ++
Sbjct: 488 TYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDEL 547
Query: 351 PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP-----------------L 393
G PD T+ ++ G C+ + +A +E + + P
Sbjct: 548 AESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMT 607
Query: 394 SKNLNAF-----------------VSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVL 436
K LN F +S C++ + +LS++ KG + ++ +
Sbjct: 608 EKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFI 667
Query: 437 SMVCKPEKVPESFELL 452
S++ + K+ E+ ELL
Sbjct: 668 SLLMEDGKLSETDELL 683
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 147/326 (45%), Gaps = 40/326 (12%)
Query: 169 AFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKL----------- 217
A E+FD+M GV + TF L++ C +L +A + E M EFK+
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 218 ---------------------EGCV---TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLK 253
G V Y NL+ G CK+G L AF+I + M + +
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 254 LDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFE-EAYR 312
D YN LIN L AG E L +++ M+ + + VT N +I + C E EA +
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLI-DGCFELGLSLEARK 366
Query: 313 ILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM-PRRGCAPDVVTYRTLFDGL 369
+++ +E GVK + + +N+ L WLCKE K ++ G +PD+VTY TL
Sbjct: 367 LMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAY 426
Query: 370 CRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNE 429
+ A+ ++ EM KG + LN + LC+E + +L+ +G I +E
Sbjct: 427 LKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDE 486
Query: 430 GIWDVVLSMVCKPEKVPESFELLDAL 455
+ ++ + EKV ++ E+ D +
Sbjct: 487 VTYGTLIMGFFREEKVEKALEMWDEM 512
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 41/195 (21%)
Query: 257 ALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTC---------------------- 294
AL++ ++A GK AL++ ++M + N +TC
Sbjct: 132 ALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREV 191
Query: 295 ----------------NVMIGEYCRENNFEEAYRILDGVEG---VKPDVIGYNVFLGWLC 335
NV++ YC E E+A +L+ + V PD + YN L +
Sbjct: 192 FDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMS 251
Query: 336 KEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSK 395
K+G+ S+ +L DM + G P+ VTY L G C+ +EA +++ M P
Sbjct: 252 KKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLC 311
Query: 396 NLNAFVSELCQEGNF 410
N ++ LC G+
Sbjct: 312 TYNILINGLCNAGSM 326
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 171/363 (47%), Gaps = 4/363 (1%)
Query: 96 QPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAP-DACTYN 154
Q + A+ F + R ++ F LL+ + ++FD V L G D T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 155 ILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFRE 214
+L+ C A +M G PD TF +LI+ C +R+ EA + +M E
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMV-E 170
Query: 215 FKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEE 274
++ V +YT +I +CK G +++A + D+M G++ D +Y +L+N L +G+ +
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 275 ALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLG 332
A +L M + + + +T N +I + +E F +A + + + + P++ Y +
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 333 WLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
C EG EA +F+ M +GC PDVV Y +L +G C+ ++ +A+ + EM KG
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 393 LSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+ + Q G + V S + S+G N ++V+L +C KV ++ +
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 453 DAL 455
+ +
Sbjct: 411 EDM 413
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 146/313 (46%), Gaps = 6/313 (1%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD T+ LI CL + A + ++M G++PD + T+I LC+N + A L
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
++M + + V +YT+L+ G+C G A + M K+ +K D +N LI+A
Sbjct: 200 FDQM-ENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVI 325
K GK +A + EM N T +I +C E +EA ++ +E G PDV+
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
Y + CK K +AM +F++M ++G + +TY TL G + + A V M
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSK---GKICNEGIWDVVLSMVCKP 442
+ +G P + N + LC G + + D+ + G N ++V+L +C
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438
Query: 443 EKVPESFELLDAL 455
K+ ++ + + +
Sbjct: 439 GKLEKALMVFEDM 451
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/393 (25%), Positives = 157/393 (39%), Gaps = 75/393 (19%)
Query: 91 YARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APD 149
+ ++ QP A + + + +F +L++ + + + + E G PD
Sbjct: 117 FCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPD 176
Query: 150 ACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLR------- 202
Y +I + C GH + A LFD+M + G+RPD + +L++ LC + R R
Sbjct: 177 VVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLR 236
Query: 203 ----------------------------EAFELKEEMFR---------------EFKLEG 219
+A EL EM R F +EG
Sbjct: 237 GMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEG 296
Query: 220 CV-------------------TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYN 260
CV YT+LI G CK ++ A +I EM +KGL + Y
Sbjct: 297 CVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYT 356
Query: 261 TLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE-- 318
TLI + GK A V M G N T NV++ C ++A I + ++
Sbjct: 357 TLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKR 416
Query: 319 ---GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQF 375
GV P++ YNV L LC GK +A+ +F DM +R ++TY + G+C+ +
Sbjct: 417 EMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKV 476
Query: 376 REAVVVLDEMMFKGYAPLSKNLNAFVSELCQEG 408
+ AV + + KG P +S L +EG
Sbjct: 477 KNAVNLFCSLPSKGVKPNVVTYTTMISGLFREG 509
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 137/274 (50%), Gaps = 7/274 (2%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEM 176
+FN L+ A + +F EL AP+ TY LI C+ G D A ++F M
Sbjct: 249 TFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLM 308
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
++G PD + +LI+ C+ ++ +A ++ EM ++ L G YT LI+G ++G+
Sbjct: 309 ETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQK-GLTGNTITYTTLIQGFGQVGK 367
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMRE---GGCEWNSVT 293
+ A + MV +G+ + YN L++ L GK ++AL + E+M++ G N T
Sbjct: 368 PNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWT 427
Query: 294 CNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLG--WLCKEGKWSEAMDLFHDMP 351
NV++ C E+A + + + + D+ + +CK GK A++LF +P
Sbjct: 428 YNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
+G P+VVTY T+ GL R EA V+ +M
Sbjct: 488 SKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 138/307 (44%), Gaps = 9/307 (2%)
Query: 151 CTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEE 210
C Y ++R + A +LF M P F L++ + + + F++
Sbjct: 38 CNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKK----FDVVIN 93
Query: 211 MFREFKLEGCV-TIYT-NLIKG-VCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+ ++ G +YT NL+ C+ + A +M+K G + D + +LIN
Sbjct: 94 LCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFC 153
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVI 325
+ EEA+ ++ +M E G + + V +I C+ + A + D +E G++PDV+
Sbjct: 154 LGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVV 213
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
Y + LC G+W +A L M +R PDV+T+ L D + +F +A + +EM
Sbjct: 214 MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKV 445
+ AP + ++ C EG + + + +KG + + +++ CK +KV
Sbjct: 274 IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333
Query: 446 PESFELL 452
++ ++
Sbjct: 334 DDAMKIF 340
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 123/248 (49%), Gaps = 8/248 (3%)
Query: 44 SLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPL-LCHVITFYARARQPSRAVQ 102
++ +Y +I + E Q+ + + +T+ P+ + +I + + ++ A++
Sbjct: 281 NIFTYTSLINGFCMEGCVDEARQMFYLM--ETKGCFPDVVAYTSLINGFCKCKKVDDAMK 338
Query: 103 TFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAP-DACTYNILIRASC 161
F + ++ TL+ + + E+ + G P + TYN+L+ C
Sbjct: 339 IFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLC 398
Query: 162 LRGHADRAFELFDEMRSR---GVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
G +A +F++M+ R GV P+ T+ L+H LC N +L +A + E+M R+ +++
Sbjct: 399 YNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM-RKREMD 457
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
+ YT +I+G+CK G++ A + + KG+K + Y T+I+ LF+ G K EA +
Sbjct: 458 IGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVL 517
Query: 279 LEEMREGG 286
+M+E G
Sbjct: 518 FRKMKEDG 525
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 149/312 (47%), Gaps = 4/312 (1%)
Query: 115 TLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELF 173
++ F LL A R+++ V + + +G + D ++ ILI C A +
Sbjct: 70 SIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVL 129
Query: 174 DEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCK 233
+M G P TFG+L+H C +R+ +AF L M + E V +Y LI G+CK
Sbjct: 130 GKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS-GYEPNVVVYNTLIDGLCK 188
Query: 234 IGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
GEL+ A + +EM KKGL D YNTL+ L +G+ +A R+L +M + + VT
Sbjct: 189 NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVT 248
Query: 294 CNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
+I + ++ N +EA + + V P+ + YN + LC G+ +A F M
Sbjct: 249 FTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMA 308
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
+GC P+VVTY TL G C++R E + + M +G+ N + CQ G
Sbjct: 309 SKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLR 368
Query: 412 LLSTVLSDLTSK 423
+ + + S+
Sbjct: 369 VALDIFCWMVSR 380
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 162/369 (43%), Gaps = 4/369 (1%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHAL-LTCRQFDAVTELAARAGEF 145
+I + R + S A+ + + ++ +F +LLH L R DA + +
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 146 GAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
P+ YN LI C G + A EL +EM +G+ D T+ TL+ LC + R +A
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
+ +M + + V +T LI K G L A + EM++ + + YN++IN
Sbjct: 232 RMLRDMMKR-SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILD--GVEGVKPD 323
L G+ +A + + M GC N VT N +I +C+ +E ++ EG D
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
+ YN + C+ GK A+D+F M R PD++T+ L GLC + A+V D
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFD 410
Query: 384 EMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPE 443
+M N + LC+ E + L +G + + +++ +CK
Sbjct: 411 DMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
Query: 444 KVPESFELL 452
E+ EL+
Sbjct: 471 PRREADELI 479
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 122/286 (42%), Gaps = 3/286 (1%)
Query: 169 AFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLI 228
AF LF EM P F L+ R ++M + + + +T LI
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKM-ELYGISHDLYSFTILI 113
Query: 229 KGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCE 288
C+ LS+A + +M+K G + + +L++ + +A ++ M + G E
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 289 WNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDL 346
N V N +I C+ A +L+ +E G+ DV+ YN L LC G+WS+A +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARM 233
Query: 347 FHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQ 406
DM +R PDVVT+ L D + EA + EM+ P + N+ ++ LC
Sbjct: 234 LRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCM 293
Query: 407 EGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
G + SKG N ++ ++S CK V E +L
Sbjct: 294 HGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 93/219 (42%), Gaps = 2/219 (0%)
Query: 240 AFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIG 299
AF + EMV + L+ A + E + ++M G + + ++I
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIH 114
Query: 300 EYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAP 357
+CR + A +L + G +P ++ + L C + +A L M + G P
Sbjct: 115 CFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEP 174
Query: 358 DVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVL 417
+VV Y TL DGLC+ + A+ +L+EM KG N ++ LC G + + +L
Sbjct: 175 NVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARML 234
Query: 418 SDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
D+ + + + ++ + K + E+ EL ++
Sbjct: 235 RDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMI 273
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 152 bits (385), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 102/356 (28%), Positives = 163/356 (45%), Gaps = 4/356 (1%)
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIR 158
AV F + R ++ FN LL A+ +FD V L R + D +YNILI
Sbjct: 64 AVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILIN 123
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
C R A + +M G PD T +L++ C R+ EA L ++MF
Sbjct: 124 CFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP 183
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
VT + LI G+ + S A + D MV +G + D Y T++N L K G + AL +
Sbjct: 184 NTVT-FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 242
Query: 279 LEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCK 336
L++M +G E + V +I C N +A + ++ G++P+V+ YN + LC
Sbjct: 243 LKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 302
Query: 337 EGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN 396
G+WS+A L DM R P+VVT+ L D + + EA + DEM+ + P
Sbjct: 303 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 362
Query: 397 LNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
++ ++ C + + + SK N ++ ++ CK ++V E EL
Sbjct: 363 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/454 (25%), Positives = 188/454 (41%), Gaps = 40/454 (8%)
Query: 26 FQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLC 85
F L ++ + + + L SY+++I R LP VL ++ + + L
Sbjct: 96 FDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKM-MKLGYEPDIVTLS 154
Query: 86 HVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEF 145
++ Y ++ S AV + Q +FNTL+H L + L R
Sbjct: 155 SLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAR 214
Query: 146 G-APDACTYNILIRASCLRGHAD-----------------------------------RA 169
G PD TY ++ C RG D A
Sbjct: 215 GCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDA 274
Query: 170 FELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIK 229
LF EM ++G+RP+ T+ +LI LC R +A L +M E K+ V ++ LI
Sbjct: 275 LNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI-ERKINPNVVTFSALID 333
Query: 230 GVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEW 289
K G+L A ++ DEM+K+ + D Y++LIN + +EA + E M C
Sbjct: 334 AFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFP 393
Query: 290 NSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLF 347
N VT N +I +C+ EE + + G+ + + YN + L + G A +F
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 348 HDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQE 407
M G PD++TY L DGLC++ + +A+VV + + P N + +C+
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 408 GNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCK 441
G E + L+ KG N I+ ++S C+
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCR 547
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 171/356 (48%), Gaps = 4/356 (1%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
+I + + A+ F + + + + ++N+L+ L ++ + L + E
Sbjct: 261 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 320
Query: 147 A-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
P+ T++ LI A G A +L+DEM R + PD T+ +LI+ C + RL EA
Sbjct: 321 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 380
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
+ E M + VT Y LIKG CK + + EM ++GL + YNTLI
Sbjct: 381 HMFELMISKDCFPNVVT-YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQG 439
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVK--PD 323
LF+AG + A ++ ++M G + +T ++++ C+ E+A + + ++ K PD
Sbjct: 440 LFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
+ YN+ + +CK GK + DLF + +G P+V+ Y T+ G CR EA +
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFR 559
Query: 384 EMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMV 439
EM G P S N + ++G+ + ++ ++ S G + + +V++M+
Sbjct: 560 EMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 131/292 (44%), Gaps = 3/292 (1%)
Query: 167 DRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTN 226
D A +LF EM P F L+ + + ++ L E M + ++ + Y
Sbjct: 62 DDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERM-QNLRISYDLYSYNI 120
Query: 227 LIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGG 286
LI C+ +L A + +M+K G + D ++L+N + EA+ ++++M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 287 CEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAM 344
+ N+VT N +I N EA ++D + G +PD+ Y + LCK G A+
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 345 DLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSEL 404
L M + DVV Y T+ D LC ++ +A+ + EM KG P N+ + L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 405 CQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
C G + S +LSD+ + N + ++ K K+ E+ +L D ++
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 352
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 7/135 (5%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD TYNI+I C G + ++LF + +GV+P+ + T+I C EA
Sbjct: 498 PDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA--- 554
Query: 208 KEEMFREFKLEGCV---TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLIN 264
+ +FRE K +G + Y LI+ + G+ + + + EM G DA+ + +IN
Sbjct: 555 -DALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
Query: 265 ALFKAGKKEEALRVL 279
L ++ L +L
Sbjct: 614 MLHDGRLEKSYLEML 628
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 169/356 (47%), Gaps = 4/356 (1%)
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAP-DACTYNILIR 158
AV F + R ++ F+ LL A+ ++FD V + G + TYNI+I
Sbjct: 49 AVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMIN 108
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
C R A + +M G P T +L++ C +R+ EA L ++M E +
Sbjct: 109 CLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV-EMGYQ 167
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
+T L+ G+ + + S A + + MV KG + D Y +IN L K G+ + AL +
Sbjct: 168 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 227
Query: 279 LEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCK 336
L +M +G E + V + +I C+ + ++A + ++ G++PDV Y+ + LC
Sbjct: 228 LNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 287
Query: 337 EGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN 396
G+WS+A L DM R P+VVT+ +L D + + EA + DEM+ + P
Sbjct: 288 YGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVT 347
Query: 397 LNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
N+ ++ C + + + + SK + + ++ +++ CK +KV + EL
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 159/344 (46%), Gaps = 4/344 (1%)
Query: 115 TLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELF 173
++ + N+LL+ + L + E G PD T+ L+ A A L
Sbjct: 134 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 193
Query: 174 DEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCK 233
+ M +G +PD T+G +I+ LC+ A L +M + K+E V IY+ +I +CK
Sbjct: 194 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM-EKGKIEADVVIYSTVIDSLCK 252
Query: 234 IGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
+ A + EM KG++ D Y++LI+ L G+ +A R+L +M E N VT
Sbjct: 253 YRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVT 312
Query: 294 CNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
N +I + +E EA ++ D + + P+++ YN + C + EA +F M
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMV 372
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
+ C PDVVTY TL +G C+ ++ + + + +M +G + + Q + +
Sbjct: 373 SKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCD 432
Query: 412 LLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
V + S G N ++ +L +CK K+ ++ + + L
Sbjct: 433 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Score = 138 bits (347), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 165/369 (44%), Gaps = 4/369 (1%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
VI + +P A+ + + + + ++T++ +L R D L G
Sbjct: 211 VINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKG 270
Query: 147 A-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
PD TY+ LI C G A L +M R + P+ TF +LI + +L EA
Sbjct: 271 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAE 330
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
+L +EM + ++ + Y +LI G C L A +I MV K D YNTLIN
Sbjct: 331 KLFDEMIQR-SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPD 323
KA K + + + +M G N+VT +I + + ++ + A + + +GV P+
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPN 449
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
++ YN L LCK GK +AM +F + + PD+ TY + +G+C+ + + +
Sbjct: 450 IMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFC 509
Query: 384 EMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPE 443
+ KG P N +S C++G E T+ + G + + G ++ ++ +
Sbjct: 510 SLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDG 569
Query: 444 KVPESFELL 452
S EL+
Sbjct: 570 DKAASAELI 578
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 169/369 (45%), Gaps = 8/369 (2%)
Query: 91 YARARQPSRAVQ-TFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPD 149
+ R PS ++ + S S+ R S N LLH L +AV P
Sbjct: 9 HLRKASPSFCLRGIYFSGLSYDGYREKLSRNALLHLKLD----EAVDLFGEMVKSRPFPS 64
Query: 150 ACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKE 209
++ L+ A D ++M GV + T+ +I+ LC S+L A +
Sbjct: 65 IVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILG 124
Query: 210 EMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKA 269
+M + VT+ +L+ G C +S A + D+MV+ G + D + TL++ LF+
Sbjct: 125 KMMKLGYGPSIVTL-NSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH 183
Query: 270 GKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VKPDVIGY 327
K EA+ ++E M GC+ + VT +I C+ + A +L+ +E ++ DV+ Y
Sbjct: 184 NKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIY 243
Query: 328 NVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMF 387
+ + LCK +A++LF +M +G PDV TY +L LC + ++ +A +L +M+
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLE 303
Query: 388 KGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPE 447
+ P N+ + +EG + ++ + N ++ +++ C +++ E
Sbjct: 304 RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDE 363
Query: 448 SFELLDALV 456
+ ++ +V
Sbjct: 364 AQQIFTLMV 372
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 74/263 (28%), Positives = 113/263 (42%), Gaps = 38/263 (14%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P+ TYN LI C+ D A ++F M S+ PD T+ TLI+ C+ ++ + EL
Sbjct: 343 PNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMEL 402
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+M R L G YT LI G + + A + +MV G+ + YNTL++ L
Sbjct: 403 FRDMSRR-GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 461
Query: 268 KAGKKEEALRVLEE---------------MREGGCE-------WN-------------SV 292
K GK E+A+ V E M EG C+ W+ +
Sbjct: 462 KNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 521
Query: 293 TCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM 350
N MI +C++ EEAY + + +G PD YN + ++G + + +L +M
Sbjct: 522 AYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 581
Query: 351 PRRGCAPDVVTYRTLFDGLCRWR 373
A D TY + D L R
Sbjct: 582 RSCRFAGDASTYGLVTDMLHDGR 604
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 152 bits (383), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 191/397 (48%), Gaps = 29/397 (7%)
Query: 6 PISPFRLSSLLR---SQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLP 62
P +P ++S+L+ + ++ F FL+ +HR + H S+DL I R + P
Sbjct: 53 PWTPNLVNSVLKRLWNHGPKALQFFHFLD----NHHREYVHDASSFDLAIDIAARLHLHP 108
Query: 63 EMEQVLHQLHLDTRHRVPEPLLCHVIT-FYARARQPSRAVQTFLSIPSFRCQRTLKSFNT 121
+ ++H++ + P P ++ YA A +P +AV+ FL++ C + L SFNT
Sbjct: 109 TVWSLIHRMR--SLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNT 166
Query: 122 LLHALLTCRQFDAVTEL-AARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRG 180
+L L ++ + EL A G F D TYN+++ CL +A E+ EM RG
Sbjct: 167 ILDVLCKSKRVEKAYELFRALRGRFSV-DTVTYNVILNGWCLIKRTPKALEVLKEMVERG 225
Query: 181 VRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC---VTIYTNLIKGVCKIGEL 237
+ P+ T+ T++ ++R A+E F E K C V YT ++ G GE+
Sbjct: 226 INPNLTTYNTMLKGFFRAGQIRHAWEF----FLEMKKRDCEIDVVTYTTVVHGFGVAGEI 281
Query: 238 SWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVM 297
A + DEM+++G+ A YN +I L K E A+ + EEM G E N T NV+
Sbjct: 282 KRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVL 341
Query: 298 I------GEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
I GE+ R EE + ++ EG +P+ YN+ + + + + +A+ LF M
Sbjct: 342 IRGLFHAGEFSRG---EELMQRMEN-EGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMG 397
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFK 388
C P++ TY L G+ ++ + VV ++ K
Sbjct: 398 SGDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAK 434
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 133/293 (45%), Gaps = 4/293 (1%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
P T+ I+ G D+A +LF M G D A+F T++ LC++ R+ +A+E
Sbjct: 123 GPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYE 182
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
L + F ++ Y ++ G C I A + EMV++G+ + YNT++
Sbjct: 183 LFRALRGRFSVD--TVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGF 240
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDV 324
F+AG+ A EM++ CE + VT ++ + + A + D + EGV P V
Sbjct: 241 FRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSV 300
Query: 325 IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDE 384
YN + LCK+ A+ +F +M RRG P+V TY L GL +F ++
Sbjct: 301 ATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQR 360
Query: 385 MMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLS 437
M +G P + N + + E + + S + N +++++S
Sbjct: 361 MENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILIS 413
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 172/371 (46%), Gaps = 4/371 (1%)
Query: 88 ITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG- 146
I + R Q S A+ + + + + ++LL+ ++ L + E G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
PD T+ LI L A A L D+M RG +PD T+GT+++ LC+ + A
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
L ++M + K+E V IY +I G+CK + A + EM KG++ D Y++LI+ L
Sbjct: 245 LLKKM-EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDV 324
G+ +A R+L +M E N VT + +I + +E EA ++ D + + PD+
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 325 IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDE 384
Y+ + C + EA +F M + C P+VVTY TL G C+ ++ E + + E
Sbjct: 364 FTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFRE 423
Query: 385 MMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEK 444
M +G + + Q + + V + S G N ++++L +CK K
Sbjct: 424 MSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGK 483
Query: 445 VPESFELLDAL 455
+ ++ + + L
Sbjct: 484 LAKAMVVFEYL 494
Score = 151 bits (382), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 167/356 (46%), Gaps = 4/356 (1%)
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIR 158
AV F + R ++ FN LL A+ +F+ V L + G + D TY+I I
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
C R A + +M G PD T +L++ C + R+ +A L ++M E +
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV-EMGYK 185
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
+T LI G+ + S A + D+MV++G + D Y T++N L K G + AL +
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSL 245
Query: 279 LEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCK 336
L++M +G E + V N +I C+ + ++A + ++ G++PDV Y+ + LC
Sbjct: 246 LKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCN 305
Query: 337 EGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN 396
G+WS+A L DM R P+VVT+ L D + + EA + DEM+ + P
Sbjct: 306 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 365
Query: 397 LNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
++ ++ C + + + SK N + ++ CK ++V E EL
Sbjct: 366 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 168/380 (44%), Gaps = 41/380 (10%)
Query: 96 QPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAAR--AGEFGAPDACTY 153
+ S AV + CQ L ++ T+++ L D L + G+ A D Y
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA-DVVIY 261
Query: 154 NILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFR 213
N +I C H D A LF EM ++G+RPD T+ +LI LC R +A L +M
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI- 320
Query: 214 EFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKE 273
E K+ V ++ LI K G+L A ++ DEM+K+ + D Y++LIN + +
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380
Query: 274 EALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRIL------------------- 314
EA + E M C N VT + +I +C+ EE +
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440
Query: 315 ---------DGVE---------GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCA 356
D + GV P+++ YN+ L LCK GK ++AM +F + R
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500
Query: 357 PDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTV 416
PD+ TY + +G+C+ + + + + KG +P N +S C++G+ E ++
Sbjct: 501 PDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSL 560
Query: 417 LSDLTSKGKICNEGIWDVVL 436
L + G + N G ++ ++
Sbjct: 561 LKKMKEDGPLPNSGTYNTLI 580
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 147/294 (50%), Gaps = 3/294 (1%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P+ T++ LI A G A +L+DEM R + PD T+ +LI+ C + RL EA +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
E M + VT Y+ LIKG CK + + EM ++GL + Y TLI+ F
Sbjct: 386 FELMISKDCFPNVVT-YSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFF 444
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVI 325
+A + A V ++M G N +T N+++ C+ +A + + ++ ++PD+
Sbjct: 445 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 504
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
YN+ + +CK GK + +LF ++ +G +P+V+ Y T+ G CR EA +L +M
Sbjct: 505 TYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKM 564
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMV 439
G P S N + ++G+ E + ++ ++ S G + +V +M+
Sbjct: 565 KEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 618
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 123/266 (46%), Gaps = 4/266 (1%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD TY+ LI C+ D A +F+ M S+ P+ T+ TLI C+ R+ E EL
Sbjct: 361 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMEL 420
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
EM + L G YT LI G + + A + +MV G+ + YN L++ L
Sbjct: 421 FREMSQR-GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLC 479
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRIL--DGVEGVKPDVI 325
K GK +A+ V E ++ E + T N+MI C+ E+ + + ++GV P+VI
Sbjct: 480 KNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVI 539
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
YN + C++G EA L M G P+ TY TL R + ++ EM
Sbjct: 540 AYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFE 411
G+A + + V+ + +G +
Sbjct: 600 RSCGFAGDASTI-GLVTNMLHDGRLD 624
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 135/309 (43%), Gaps = 34/309 (11%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P +N L+ A + L ++M++ G+ D T+ I+ C S+L A +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+M + E + ++L+ G C +S A + D+MV+ G K D + TLI+ LF
Sbjct: 141 LAKMMK-LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGY 327
K EA+ ++++M + GC+ PD++ Y
Sbjct: 200 LHNKASEAVALVDQMVQRGCQ---------------------------------PDLVTY 226
Query: 328 NVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMF 387
+ LCK G A+ L M + DVV Y T+ DGLC+++ +A+ + EM
Sbjct: 227 GTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDN 286
Query: 388 KGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPE 447
KG P ++ +S LC G + S +LSD+ + N + ++ K K+ E
Sbjct: 287 KGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVE 346
Query: 448 SFELLDALV 456
+ +L D ++
Sbjct: 347 AEKLYDEMI 355
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/516 (25%), Positives = 219/516 (42%), Gaps = 75/516 (14%)
Query: 7 ISPFRLSSLLRSQKDPSVA--FQLFLNPNPQTNHRPFRHSLLSYDLIITKLG-------- 56
ISP +SSL DP A F +++ NP+ ++HS+ SY ++T L
Sbjct: 88 ISPSHVSSLFSLDLDPKTALNFSHWISQNPR-----YKHSVYSYASLLTLLINNGYVGVV 142
Query: 57 ---RAKMLPEMEQVLHQLHL---------DTRHRVPEPLL--CH--VITFYARARQPSRA 100
R M+ + V L++ D R + L+ C+ ++ AR
Sbjct: 143 FKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEM 202
Query: 101 VQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRA 159
Q ++ + + + ++N +++ + + ++ E G PD TY LI
Sbjct: 203 KQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMG 262
Query: 160 SCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEG 219
C R D AF++F+EM +G R ++ + LIH LC R+ EA +L F + K +
Sbjct: 263 YCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDL----FVKMKDDE 318
Query: 220 C---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEAL 276
C V YT LIK +C S A + EM + G+K + Y LI++L K E+A
Sbjct: 319 CFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAR 378
Query: 277 RVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVK--------------- 321
+L +M E G N +T N +I YC+ E+A +++ +E K
Sbjct: 379 ELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY 438
Query: 322 ---------------------PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVV 360
PDV+ YN + C+ G + A L M RG PD
Sbjct: 439 CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQW 498
Query: 361 TYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDL 420
TY ++ D LC+ ++ EA + D + KG P A + C+ G + +L +
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 421 TSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
SK + N ++ ++ +C K+ E+ L + +V
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMV 594
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 174/370 (47%), Gaps = 5/370 (1%)
Query: 86 HVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEF 145
H+I AR+ A+ F+ + C T++++ L+ +L + L E
Sbjct: 293 HLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEET 352
Query: 146 G-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREA 204
G P+ TY +LI + C + ++A EL +M +G+ P+ T+ LI+ C+ + +A
Sbjct: 353 GIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDA 412
Query: 205 FELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLIN 264
++ E M KL Y LIKG CK + A + ++M+++ + D YN+LI+
Sbjct: 413 VDVVELM-ESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLID 470
Query: 265 ALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKP 322
++G + A R+L M + G + T MI C+ EEA + D +E GV P
Sbjct: 471 GQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNP 530
Query: 323 DVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVL 382
+V+ Y + CK GK EA + M + C P+ +T+ L GLC + +EA ++
Sbjct: 531 NVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLE 590
Query: 383 DEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKP 442
++M+ G P + L ++G+F+ + + S G + + + C+
Sbjct: 591 EKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCRE 650
Query: 443 EKVPESFELL 452
++ ++ +++
Sbjct: 651 GRLLDAEDMM 660
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 209/487 (42%), Gaps = 79/487 (16%)
Query: 35 QTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITF---- 90
+T +P H+ Y ++I L + ++L Q+ + + L+ +VIT+
Sbjct: 351 ETGIKPNIHT---YTVLIDSLCSQCKFEKARELLGQM-------LEKGLMPNVITYNALI 400
Query: 91 --YARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAP 148
Y + AV + S + +++N L+ A+ L P
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLP 460
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
D TYN LI C G+ D A+ L M RG+ PDQ T+ ++I LC++ R+ EA +L
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDL- 519
Query: 209 EEMFREFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
F + +G V +YT LI G CK G++ A + ++M+ K ++ +N LI+
Sbjct: 520 ---FDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHG 576
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPD 323
L GK +EA + E+M + G + T ++I ++ +F+ AY + G KPD
Sbjct: 577 LCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPD 636
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTL-------------FDGLC 370
Y F+ C+EG+ +A D+ M G +PD+ TY +L FD L
Sbjct: 637 AHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLK 696
Query: 371 RWR----------------------------------------QFREAVVVLDEMMFKGY 390
R R +F V +L++M+
Sbjct: 697 RMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSV 756
Query: 391 APLSKNLNAFVSELCQEGNFELLSTVLSDLT-SKGKICNEGIWDVVLSMVCKPEKVPESF 449
P +K+ + +C+ GN + V + ++G +E +++ +LS CK +K E+
Sbjct: 757 TPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAA 816
Query: 450 ELLDALV 456
+++D ++
Sbjct: 817 KVVDDMI 823
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 166/395 (42%), Gaps = 58/395 (14%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEM 176
++ +++ +L ++ + +L + G P+ Y LI C G D A + ++M
Sbjct: 499 TYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKM 558
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
S+ P+ TF LIH LC + +L+EA L+E+M + L+ V+ T LI + K G+
Sbjct: 559 LSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVK-IGLQPTVSTDTILIHRLLKDGD 617
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLI-------------------------------NA 265
A+ +M+ G K DA Y T I ++
Sbjct: 618 FDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSS 677
Query: 266 LFKA----GKKEEALRVLEEMREGGCEWNSVTCNVMIG---------------EYCRENN 306
L K G+ A VL+ MR+ GCE + T +I E C +N
Sbjct: 678 LIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSN 737
Query: 307 FEEAYRILDGVE-----GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR-GCAPDVV 360
E +++ +E V P+ Y + +C+ G A +F M R G +P +
Sbjct: 738 MMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSEL 797
Query: 361 TYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDL 420
+ L C+ ++ EA V+D+M+ G+ P ++ + L ++G E ++V +L
Sbjct: 798 VFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNL 857
Query: 421 TSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
G +E W +++ V K V +EL + +
Sbjct: 858 LQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVM 892
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 115/261 (44%), Gaps = 24/261 (9%)
Query: 130 RQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATF 188
R DA ++ A+ E G +PD TY+ LI+ G + AF++ MR G P Q TF
Sbjct: 652 RLLDA-EDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTF 710
Query: 189 GTLIHRL---------------CENSRLRE---AFELKEEMFREFKLEGCVTIYTNLIKG 230
+LI L C S + E EL E+M E + Y LI G
Sbjct: 711 LSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMV-EHSVTPNAKSYEKLILG 769
Query: 231 VCKIGELSWAFRIKDEMVK-KGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEW 289
+C++G L A ++ D M + +G+ ++N L++ K K EA +V+++M G
Sbjct: 770 ICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLP 829
Query: 290 NSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLF 347
+C V+I ++ E + + G D + + + + + K+G +LF
Sbjct: 830 QLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELF 889
Query: 348 HDMPRRGCAPDVVTYRTLFDG 368
+ M + GC TY L +G
Sbjct: 890 NVMEKNGCKFSSQTYSLLIEG 910
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 177/363 (48%), Gaps = 7/363 (1%)
Query: 69 HQLHLDTRHRVPEPLLCHVITFYA---RARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHA 125
H+++ D ++ P L + T+ +A +P + F I + R +S++ L+H
Sbjct: 502 HKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHG 561
Query: 126 LLTCRQFDAVTELAARAGEFGAP-DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPD 184
L+ + EL E G D YNI+I C G ++A++L +EM+++G P
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621
Query: 185 QATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIK 244
T+G++I L + RL EA+ L EE + ++E V IY++LI G K+G + A+ I
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEA-KSKRIELNVVIYSSLIDGFGKVGRIDEAYLIL 680
Query: 245 DEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRE 304
+E+++KGL + +N+L++AL KA + EAL + M+E C N VT ++I C+
Sbjct: 681 EELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKV 740
Query: 305 NNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTY 362
F +A+ + +G+KP I Y + L K G +EA LF G PD Y
Sbjct: 741 RKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACY 800
Query: 363 RTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTS 422
+ +GL + +A + +E +G +K + L + E + V + L
Sbjct: 801 NAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQAAIVGAVLRE 860
Query: 423 KGK 425
GK
Sbjct: 861 TGK 863
Score = 139 bits (350), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 195/420 (46%), Gaps = 18/420 (4%)
Query: 46 LSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCH-VITFYARARQPSRAVQTF 104
++Y +I L +A L E ++ HL+ RVP + +I Y A + A
Sbjct: 274 VTYTSMIGVLCKANRLDEAVEMFE--HLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLL 331
Query: 105 L------SIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIR 158
SIPS + ++N +L L + D ++ + AP+ TYNILI
Sbjct: 332 ERQRAKGSIPS------VIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILID 385
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
C G D AFEL D M+ G+ P+ T ++ RLC++ +L EA + EEM +
Sbjct: 386 MLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTP 445
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
+T + +LI G+ K+G + A+++ ++M+ + ++ +Y +LI F G+KE+ ++
Sbjct: 446 DEIT-FCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKI 504
Query: 279 LEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVK--PDVIGYNVFLGWLCK 336
++M C + N + + E+ + + ++ + PD Y++ + L K
Sbjct: 505 YKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIK 564
Query: 337 EGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN 396
G +E +LF+ M +GC D Y + DG C+ + +A +L+EM KG+ P
Sbjct: 565 AGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVT 624
Query: 397 LNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ + L + + + + SK N I+ ++ K ++ E++ +L+ L+
Sbjct: 625 YGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELM 684
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 190/414 (45%), Gaps = 13/414 (3%)
Query: 47 SYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPL-LCHVITFYARARQPSRAVQTFL 105
+ ++++ +L +++ L E + ++ D + P+ + C +I + + A + +
Sbjct: 414 TVNIMVDRLCKSQKLDEACAMFEEM--DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYE 471
Query: 106 SIPSFRCQRTLKSFNTLLHALLT-CRQFDAVTELAARAGEFGAPDACTYNILIRASCLRG 164
+ C+ + +L+ R+ D + +PD N + G
Sbjct: 472 KMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAG 531
Query: 165 HADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVT-- 222
++ +F+E+++R PD ++ LIH L + E +EL F K +GCV
Sbjct: 532 EPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYEL----FYSMKEQGCVLDT 587
Query: 223 -IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEE 281
Y +I G CK G+++ A+++ +EM KG + Y ++I+ L K + +EA + EE
Sbjct: 588 RAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 647
Query: 282 MREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGK 339
+ E N V + +I + + +EAY IL+ + +G+ P++ +N L L K +
Sbjct: 648 AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEE 707
Query: 340 WSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNA 399
+EA+ F M C P+ VTY L +GLC+ R+F +A V EM +G P + +
Sbjct: 708 INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTT 767
Query: 400 FVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLD 453
+S L + GN + + G + + ++ ++ + + ++F L +
Sbjct: 768 MISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFE 821
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/440 (25%), Positives = 188/440 (42%), Gaps = 26/440 (5%)
Query: 30 LNPNPQTNHRP--FRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHV 87
L+ N + + +P F + + + I L P E L L P+P V
Sbjct: 16 LSDNGENHEKPYTFEGNRQTVNDICNVLETGPWGPSAENTLSALSFK-----PQPEF--V 68
Query: 88 ITFYARARQPSRAVQTFLSIPSFRCQRTL-----KSFNTLLHALLTCRQFDAVTELAARA 142
I R + +RA++ F + +RT +S+N+LL + CR FDA+ ++
Sbjct: 69 IGVLRRLKDVNRAIEYF----RWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEM 124
Query: 143 GEFGAPDACTYNILIRASCLRGHADR-AFELFDEMRSRGVRPDQATFGTLIHRLCENSRL 201
G + I + C++ + R +++ MR RP + + TLI +
Sbjct: 125 SVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHS 184
Query: 202 REAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNT 261
L ++M +E E V ++T LI+G K G + A + DEM L D LYN
Sbjct: 185 DMMLTLFQQM-QELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNV 243
Query: 262 LINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVK 321
I++ K GK + A + E+ G + + VT MIG C+ N +EA + + +E +
Sbjct: 244 CIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 322 --PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAV 379
P YN + GK+ EA L +G P V+ Y + L + + EA+
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEAL 363
Query: 380 VVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMV 439
V +EM K AP N + LC+ G + + + G N ++++ +
Sbjct: 364 KVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRL 422
Query: 440 CKPEKVPES---FELLDALV 456
CK +K+ E+ FE +D V
Sbjct: 423 CKSQKLDEACAMFEEMDYKV 442
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 159/345 (46%), Gaps = 4/345 (1%)
Query: 116 LKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFD 174
L +FN +++ C Q + + + G PD T L+ C R A L D
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 175 EMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKI 234
+M G +PD + +I LC+ R+ +AF+ +E+ R+ VT YT L+ G+C
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVT-YTALVNGLCNS 238
Query: 235 GELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTC 294
S A R+ +M+KK + + Y+ L++A K GK EA + EEM + + VT
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 295 NVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPR 352
+ +I C + +EA ++ D + +G DV+ YN + CK + + M LF +M +
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 353 RGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFEL 412
RG + VTY TL G + +A +M F G +P N + LC G E
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEK 418
Query: 413 LSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALVL 457
+ D+ + + + V+ +CK KV E++ L +L L
Sbjct: 419 ALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSL 463
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/338 (28%), Positives = 160/338 (47%), Gaps = 40/338 (11%)
Query: 130 RQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATF 188
R DAV+ L + E G PD YN +I + C + AF+ F E+ +G+RP+ T+
Sbjct: 170 RVSDAVS-LVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTY 228
Query: 189 GTLIHRLCENSR-----------------------------------LREAFELKEEMFR 213
L++ LC +SR + EA EL EEM R
Sbjct: 229 TALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVR 288
Query: 214 EFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKE 273
++ + Y++LI G+C + A ++ D MV KG D YNTLIN KA + E
Sbjct: 289 -MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVE 347
Query: 274 EALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFL 331
+ +++ EM + G N+VT N +I + + + ++A ++ G+ PD+ YN+ L
Sbjct: 348 DGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILL 407
Query: 332 GWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYA 391
G LC G+ +A+ +F DM +R D+VTY T+ G+C+ + EA + + KG
Sbjct: 408 GGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLK 467
Query: 392 PLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNE 429
P +S LC +G + + + + +G + N+
Sbjct: 468 PDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKND 505
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 97/196 (49%), Gaps = 4/196 (2%)
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIR 158
A Q F + S C + S+NTL++ ++ + +L + G + TYN LI+
Sbjct: 314 ANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQ 373
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM-FREFKL 217
G D+A E F +M G+ PD T+ L+ LC+N L +A + E+M RE L
Sbjct: 374 GFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDL 433
Query: 218 EGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALR 277
+ + YT +I+G+CK G++ A+ + + KGLK D Y T+++ L G E
Sbjct: 434 D--IVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEA 491
Query: 278 VLEEMREGGCEWNSVT 293
+ +M++ G N T
Sbjct: 492 LYTKMKQEGLMKNDCT 507
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 66/140 (47%)
Query: 317 VEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFR 376
V G++ D+ +N+ + C + S A+ + M + G PD VT +L +G CR +
Sbjct: 113 VLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVS 172
Query: 377 EAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVL 436
+AV ++D+M+ GY P NA + LC+ ++ KG N + ++
Sbjct: 173 DAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV 232
Query: 437 SMVCKPEKVPESFELLDALV 456
+ +C + ++ LL ++
Sbjct: 233 NGLCNSSRWSDAARLLSDMI 252
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 82/212 (38%), Gaps = 44/212 (20%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
+I + +A++ ++ F + ++NTL+ D E ++ FG
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 147 -APDACTYNILIRASCLRGHADRAFELFDEMRSR-------------------------- 179
+PD TYNIL+ C G ++A +F++M+ R
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 180 ---------GVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKL-------EGCVTI 223
G++PD T+ T++ LC L E L +M +E + +G +T+
Sbjct: 456 SLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITL 515
Query: 224 YTNLIKGVCKIGELSWAFR-IKDEMVKKGLKL 254
LIK + G + IK + KK L L
Sbjct: 516 SAELIKKMLSCGYAPSLLKDIKSGVCKKALSL 547
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 204/441 (46%), Gaps = 32/441 (7%)
Query: 23 SVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEP 82
S+ F +L T HR +S++S+ + KLG+ K E ++H + R
Sbjct: 40 SLKFLAYLVSRGYTPHRSSFNSVVSF---VCKLGQVKF---AEDIVHSM---PRFGCEPD 90
Query: 83 LLCH--VITFYAR---ARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTE 137
++ + +I + R R S +++ + F C+ + SFN+L + + D V
Sbjct: 91 VISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFV 150
Query: 138 LAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCE 197
+ +P+ TY+ I C G A + F M+ + P+ TF LI C+
Sbjct: 151 YMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCK 210
Query: 198 NSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAA 257
L A L +EM R ++ V YT LI G CK GE+ A + MV+ ++ ++
Sbjct: 211 AGDLEVAVSLYKEM-RRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSL 269
Query: 258 LYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV 317
+Y T+I+ F+ G + A++ L +M G + V+I C +EA I++ +
Sbjct: 270 VYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDM 329
Query: 318 E--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQF 375
E + PD++ + + K G+ A++++H + RG PDVV T+ DG+ + Q
Sbjct: 330 EKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQL 389
Query: 376 REAVVVL-----DEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEG 430
EA+V +++M+ + LC+EG+F + + S ++ G + ++
Sbjct: 390 HEAIVYFCIEKANDVMY----------TVLIDALCKEGDFIEVERLFSKISEAGLVPDKF 439
Query: 431 IWDVVLSMVCKPEKVPESFEL 451
++ ++ +CK + ++F+L
Sbjct: 440 MYTSWIAGLCKQGNLVDAFKL 460
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 168/369 (45%), Gaps = 20/369 (5%)
Query: 70 QLHLDTRHRVPEPLLC-HVITF------YARARQPSRAVQTFLSIPSFRCQRTLKSFNTL 122
QL L + H + L +V+TF Y +A AV + + R + ++ L
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239
Query: 123 LHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEMRSRGV 181
+ + E+ +R E P++ Y +I RG +D A + +M ++G+
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299
Query: 182 RPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAF 241
R D +G +I LC N +L+EA E+ E+M + L + I+T ++ K G + A
Sbjct: 300 RLDITAYGVIISGLCGNGKLKEATEIVEDMEKS-DLVPDMVIFTTMMNAYFKSGRMKAAV 358
Query: 242 RIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGC--EWNSVTCNVMIG 299
+ +++++G + D +T+I+ + K G+ EA+ C + N V V+I
Sbjct: 359 NMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF-------CIEKANDVMYTVLID 411
Query: 300 EYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAP 357
C+E +F E R+ + G+ PD Y ++ LCK+G +A L M + G
Sbjct: 412 ALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLL 471
Query: 358 DVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVL 417
D++ Y TL GL EA V DEM+ G +P S + + +EGN S +L
Sbjct: 472 DLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLL 531
Query: 418 SDLTSKGKI 426
D+ +G +
Sbjct: 532 LDMQRRGLV 540
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Query: 274 EALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFL 331
EAL+ L +R+ + TCN I + N + + L + G P +N +
Sbjct: 4 EALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNSVV 63
Query: 332 GWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
++CK G+ A D+ H MPR GC PDV++Y +L DG CR R A +VL+ +
Sbjct: 64 SFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESL 117
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 151/312 (48%), Gaps = 3/312 (0%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD T+NILI C G +++ L +M G P T+ T++H C+ R + A EL
Sbjct: 231 PDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIEL 290
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+ M + ++ V Y LI +C+ ++ + + +M K+ + + YNTLIN
Sbjct: 291 LDHM-KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFS 349
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVI 325
GK A ++L EM G N VT N +I + E NF+EA ++ +E G+ P +
Sbjct: 350 NEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEV 409
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
Y V L LCK ++ A + M R G +TY + DGLC+ EAVV+L+EM
Sbjct: 410 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 469
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKV 445
G P +A ++ C+ G F+ ++ + G N I+ ++ C+ +
Sbjct: 470 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCL 529
Query: 446 PESFELLDALVL 457
E+ + +A++L
Sbjct: 530 KEAIRIYEAMIL 541
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/409 (25%), Positives = 189/409 (46%), Gaps = 7/409 (1%)
Query: 48 YDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLS- 106
YD++I R M+ + ++ + L + P C+ I +V +FL
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFN--PSVYTCNAILGSVVKSGEDVSVWSFLKE 223
Query: 107 IPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGH 165
+ + + +FN L++ L F+ + L + + G AP TYN ++ C +G
Sbjct: 224 MLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 283
Query: 166 ADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYT 225
A EL D M+S+GV D T+ LIH LC ++R+ + + L +M + VT Y
Sbjct: 284 FKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT-YN 342
Query: 226 NLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREG 285
LI G G++ A ++ +EM+ GL + +N LI+ G +EAL++ M
Sbjct: 343 TLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAK 402
Query: 286 GCEWNSVTCNVMIGEYCRENNFEEA--YRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEA 343
G + V+ V++ C+ F+ A + + GV I Y + LCK G EA
Sbjct: 403 GLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEA 462
Query: 344 MDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSE 403
+ L ++M + G PD+VTY L +G C+ +F+ A ++ + G +P + +
Sbjct: 463 VVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYN 522
Query: 404 LCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
C+ G + + + +G + ++V+++ +CK KV E+ E +
Sbjct: 523 CCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFM 571
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 161/345 (46%), Gaps = 10/345 (2%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEM 176
++NTL++ + ++L FG +P+ T+N LI G+ A ++F M
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEG-CV--TIYTNLIKGVCK 233
++G+ P + ++G L+ LC+N+ F+L + K G CV YT +I G+CK
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAE----FDLARGFYMRMKRNGVCVGRITYTGMIDGLCK 455
Query: 234 IGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
G L A + +EM K G+ D Y+ LIN K G+ + A ++ + G N +
Sbjct: 456 NGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGII 515
Query: 294 CNVMIGEYCRENNFEEAYRILDG--VEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
+ +I CR +EA RI + +EG D +NV + LCK GK +EA + M
Sbjct: 516 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 575
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
G P+ V++ L +G + +A V DEM G+ P + + LC+ G+
Sbjct: 576 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 635
Query: 412 LLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
L L + + +++ +L+ +CK + ++ L +V
Sbjct: 636 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMV 680
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 128/294 (43%), Gaps = 4/294 (1%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEM 176
S+ LL L +FD R G TY +I C G D A L +EM
Sbjct: 410 SYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM 469
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
G+ PD T+ LI+ C+ R + A E+ ++R L IY+ LI C++G
Sbjct: 470 SKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR-VGLSPNGIIYSTLIYNCCRMGC 528
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
L A RI + M+ +G D +N L+ +L KAGK EA + M G N+V+ +
Sbjct: 529 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 588
Query: 297 MIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
+I Y +A+ + D + G P Y L LCK G EA +
Sbjct: 589 LINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVP 648
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEG 408
A D V Y TL +C+ +AV + EM+ + P S + +S LC++G
Sbjct: 649 AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 702
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 122/245 (49%), Gaps = 4/245 (1%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
D T+N+LI C G + AF+L M S G+ D+ T ++ L N R +E+ +
Sbjct: 863 DRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVL 922
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
EM ++ + Y LI G+C++G++ AF +K+EM+ + + ++ AL K
Sbjct: 923 HEMSKQ-GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAK 981
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAY--RILDGVEGVKPDVIG 326
GK +EA +L M + + ++ C+ N EA R++ G+K D++
Sbjct: 982 CGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVS 1041
Query: 327 YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDG-LCRWRQFREAVVVLDEM 385
YNV + LC +G + A +L+ +M G + TY+ L G L R F A ++L ++
Sbjct: 1042 YNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIILKDL 1101
Query: 386 MFKGY 390
+ +G+
Sbjct: 1102 LARGF 1106
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 138/311 (44%), Gaps = 4/311 (1%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P+ +++ LI G +AF +FDEM G P T+G+L+ LC+ LREA +
Sbjct: 581 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 640
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+ + V +Y L+ +CK G L+ A + EMV++ + D+ Y +LI+ L
Sbjct: 641 LKSLHAVPAAVDTV-MYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 699
Query: 268 KAGKKEEALRVLEEMR-EGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDV 324
+ GK A+ +E G N V + + ++ + ++ G PD+
Sbjct: 700 RKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 759
Query: 325 IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDE 384
+ N + + GK + DL +M + P++ TY L G + + + ++
Sbjct: 760 VTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRS 819
Query: 385 MMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEK 444
++ G P ++ V +C+ E+ +L +G + +++++S C +
Sbjct: 820 IILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGE 879
Query: 445 VPESFELLDAL 455
+ +F+L+ +
Sbjct: 880 INWAFDLVKVM 890
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/479 (21%), Positives = 178/479 (37%), Gaps = 74/479 (15%)
Query: 46 LSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFL 105
++++++T L +A + E E+ + + D C +I Y + + +A F
Sbjct: 549 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC-LINGYGNSGEGLKAFSVFD 607
Query: 106 SIPSFRCQRTLKSFNTLLHALLTCRQF-DAVTELAARAGEFGAPDACTYNILIRASCLRG 164
+ T ++ +LL L +A L + A D YN L+ A C G
Sbjct: 608 EMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSG 667
Query: 165 HADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIY 224
+ +A LF EM R + PD T+ +LI LC + A +E + +Y
Sbjct: 668 NLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMY 727
Query: 225 TNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEM-- 282
T + G+ K G+ +++M G D N +I+ + GK E+ +L EM
Sbjct: 728 TCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGN 787
Query: 283 REGGCEWNS---------------------------------VTCNVMIGEYCRENNFEE 309
+ GG + +TC+ ++ C N E
Sbjct: 788 QNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEI 847
Query: 310 AYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDL--------------------- 346
+IL GV+ D +N+ + C G+ + A DL
Sbjct: 848 GLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVS 907
Query: 347 --------------FHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
H+M ++G +P+ Y L +GLCR + A VV +EM+ P
Sbjct: 908 VLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICP 967
Query: 393 LSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFEL 451
+ +A V L + G + + +L + + + ++ + CK V E+ EL
Sbjct: 968 PNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL 1026
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 130/322 (40%), Gaps = 45/322 (13%)
Query: 146 GAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
G P+ TYNIL+ R +F L+ + G+ PD+ T +L+ +CE++ L
Sbjct: 790 GGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNML---- 845
Query: 206 ELKEEMFREFKLEGC-VTIYT--NLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTL 262
E+ ++ + F G V YT LI C GE++WAF + M G+ LD + +
Sbjct: 846 EIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAM 905
Query: 263 INALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVK- 321
++ L + + +E+ VL EM + G S +I CR + + A+ + + + K
Sbjct: 906 VSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKI 965
Query: 322 ------------------------------------PDVIGYNVFLGWLCKEGKWSEAMD 345
P + + + CK G EA++
Sbjct: 966 CPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALE 1025
Query: 346 LFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFV-SEL 404
L M G D+V+Y L GLC A + +EM G+ + A + L
Sbjct: 1026 LRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1085
Query: 405 CQEGNFELLSTVLSDLTSKGKI 426
+E F +L DL ++G I
Sbjct: 1086 ARETAFSGADIILKDLLARGFI 1107
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 79/168 (47%), Gaps = 2/168 (1%)
Query: 287 CEWNSVTCNVMIGEYCRENNFEEAYRI--LDGVEGVKPDVIGYNVFLGWLCKEGKWSEAM 344
C N +++I Y RE +++ I L G+ G P V N LG + K G+
Sbjct: 159 CNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVW 218
Query: 345 DLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSEL 404
+M +R PDV T+ L + LC F ++ ++ +M GYAP N +
Sbjct: 219 SFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWY 278
Query: 405 CQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
C++G F+ +L + SKG + +++++ +C+ ++ + + LL
Sbjct: 279 CKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLL 326
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/451 (25%), Positives = 212/451 (47%), Gaps = 12/451 (2%)
Query: 12 LSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQL 71
+ +LL++ +P +A+++F + SL + I L RAKM E+++ LH L
Sbjct: 6 VKALLKNTNNPRLAWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQE-LHNL 64
Query: 72 HLDTR-HRVPEPLLCHVITFYARARQPSRAVQTFLSIPSF--RCQRTLKSFNTLLHALLT 128
L + + L V++ +A++ +A F + S + ++ +N LL + +
Sbjct: 65 ILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLLESCIK 124
Query: 129 CRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQAT 187
R+ + V+ L G AP T+N+LIRA C D A ELFDEM +G +P++ T
Sbjct: 125 ERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFT 184
Query: 188 FGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEM 247
FG L+ C+ + EL M F + IY ++ C+ G + ++ ++M
Sbjct: 185 FGILVRGYCKAGLTDKGLELLNAM-ESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKM 243
Query: 248 VKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMR----EGGCEWNSVTCNVMIGEYCR 303
++GL D +N+ I+AL K GK +A R+ +M G NS+T N+M+ +C+
Sbjct: 244 REEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCK 303
Query: 304 ENNFEEAYRILDGVEGVK--PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVT 361
E+A + + + + YN++L L + GK+ EA + M +G P + +
Sbjct: 304 VGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYS 363
Query: 362 YRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLT 421
Y L DGLC+ +A ++ M G P + + C G + ++L ++
Sbjct: 364 YNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMM 423
Query: 422 SKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+ N +++L + K ++ E+ ELL
Sbjct: 424 RNNCLPNAYTCNILLHSLWKMGRISEAEELL 454
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 189/429 (44%), Gaps = 36/429 (8%)
Query: 45 LLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITF------YARARQPS 98
+++++ I+ L + + + ++ + LD +P P + IT+ + +
Sbjct: 252 IVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRP---NSITYNLMLKGFCKVGLLE 308
Query: 99 RAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQF-DAVTELAARAGEFGAPDACTYNILI 157
A F SI +L+S+N L L+ +F +A T L + P +YNIL+
Sbjct: 309 DAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILM 368
Query: 158 RASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKL 217
C G A + M+ GV PD T+G L+H C ++ A L +EM R L
Sbjct: 369 DGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCL 428
Query: 218 EGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALR 277
T L+ + K+G +S A + +M +KG LD N +++ L +G+ ++A+
Sbjct: 429 PNAYTCNI-LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIE 487
Query: 278 VLEEMR-----------------------EGGCEWNSVTCNVMIGEYCRENNFEEAYRIL 314
+++ MR E C + +T + ++ C+ F EA +
Sbjct: 488 IVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLF 547
Query: 315 DGVEG--VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRW 372
+ G ++PD + YN+F+ CK+GK S A + DM ++GC + TY +L GL
Sbjct: 548 AEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIK 607
Query: 373 RQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIW 432
Q E ++DEM KG +P N + LC+ E + +L ++ K N +
Sbjct: 608 NQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSF 667
Query: 433 DVVLSMVCK 441
++ CK
Sbjct: 668 KYLIEAFCK 676
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 109/460 (23%), Positives = 181/460 (39%), Gaps = 69/460 (15%)
Query: 35 QTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCH--VITFYA 92
Q + S+ SY++++ L + ML + + ++ L R+ V + + ++ Y
Sbjct: 351 QMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVG---LMKRNGVCPDAVTYGCLLHGYC 407
Query: 93 RARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDAC 151
+ A + C + N LLH+L + EL + E G D
Sbjct: 408 SVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTV 467
Query: 152 TYNILIRASCLRGHADRAFELFDEMRSRGVR-----------------------PDQATF 188
T NI++ C G D+A E+ MR G PD T+
Sbjct: 468 TCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITY 527
Query: 189 GTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMV 248
TL++ LC+ R EA L EM E KL+ Y I CK G++S AFR+ +M
Sbjct: 528 STLLNGLCKAGRFAEAKNLFAEMMGE-KLQPDSVAYNIFIHHFCKQGKISSAFRVLKDME 586
Query: 249 KKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFE 308
KKG YN+LI L + E +++EM+E G N T N I C E
Sbjct: 587 KKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVE 646
Query: 309 EAYRILDGV--EGVKPDVIGYNVFLGWLCK---------------------EGKWS---- 341
+A +LD + + + P+V + + CK EG +S
Sbjct: 647 DATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFN 706
Query: 342 ---------EAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
+A +L + RG Y+ L + LC+ + A +L +M+ +GY
Sbjct: 707 ELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGF 766
Query: 393 LSKNLNAFVSELCQEGNFELLSTV---LSDLTSKGKICNE 429
L + L + GN + ++ + ++ S G++ N+
Sbjct: 767 DPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANK 806
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%)
Query: 319 GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREA 378
G+ P +N+ + LC A +LF +MP +GC P+ T+ L G C+ +
Sbjct: 142 GIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKG 201
Query: 379 VVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSM 438
+ +L+ M G P N VS C+EG + ++ + +G + + ++ +S
Sbjct: 202 LELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISA 261
Query: 439 VCKPEKVPESFELLDALVL 457
+CK KV ++ + + L
Sbjct: 262 LCKEGKVLDASRIFSDMEL 280
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 168/348 (48%), Gaps = 8/348 (2%)
Query: 115 TLKSFNTLLHAL-LTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFEL 172
TL + N L++ L L + DAV L R E G P+ TY +++ C G A EL
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVL-LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 173 FDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM-FREFKLEGCVTIYTNLIKGV 231
+M R ++ D + +I LC++ L AF L EM + FK + + IYT LI+G
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKAD--IIIYTTLIRGF 292
Query: 232 CKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNS 291
C G ++ +M+K+ + D ++ LI+ K GK EA + +EM + G ++
Sbjct: 293 CYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDT 352
Query: 292 VTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHD 349
VT +I +C+EN ++A +LD + +G P++ +N+ + CK + ++LF
Sbjct: 353 VTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Query: 350 MPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGN 409
M RG D VTY TL G C + A + EM+ + P + + LC G
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGE 472
Query: 410 FELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALVL 457
E + + + GI+++++ +C KV ++++L +L L
Sbjct: 473 PEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 180/388 (46%), Gaps = 8/388 (2%)
Query: 75 TRHRVPEPLL---CHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQ 131
TR R P P L + + AR +Q + + L + + +++ CR+
Sbjct: 64 TRSR-PRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRK 122
Query: 132 FDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGT 190
+ + G PD T++ LI CL G A EL D M G +P T
Sbjct: 123 LSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNA 182
Query: 191 LIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKK 250
L++ LC N ++ +A L + M E + Y ++K +CK G+ + A + +M ++
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMV-ETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 251 GLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA 310
+KLDA Y+ +I+ L K G + A + EM G + + + +I +C +++
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301
Query: 311 YRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDG 368
++L + + PDV+ ++ + KEGK EA +L +M +RG +PD VTY +L DG
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 361
Query: 369 LCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICN 428
C+ Q +A +LD M+ KG P + N ++ C+ + + ++ +G + +
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD 421
Query: 429 EGIWDVVLSMVCKPEKVPESFELLDALV 456
++ ++ C+ K+ + EL +V
Sbjct: 422 TVTYNTLIQGFCELGKLEVAKELFQEMV 449
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 172/361 (47%), Gaps = 4/361 (1%)
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIR 158
AV F + R + L F+ L + +Q+D V +L + G A + T +I+I
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
C AF ++ G PD TF TLI+ LC R+ EA EL + M E +
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV-EMGHK 174
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
+ L+ G+C G++S A + D MV+ G + + Y ++ + K+G+ A+ +
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL 234
Query: 279 LEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCK 336
L +M E + ++V +++I C++ + + A+ + + +E G K D+I Y + C
Sbjct: 235 LRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCY 294
Query: 337 EGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN 396
G+W + L DM +R PDVV + L D + + REA + EM+ +G +P +
Sbjct: 295 AGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVT 354
Query: 397 LNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ + C+E + + +L + SKG N ++++++ CK + + EL +
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 457 L 457
L
Sbjct: 415 L 415
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 125/299 (41%), Gaps = 38/299 (12%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
D Y LIR C G D +L +M R + PD F LI + +LREA EL
Sbjct: 280 ADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEEL 339
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+EM + VT YT+LI G CK +L A + D MV KG + +N LIN
Sbjct: 340 HKEMIQRGISPDTVT-YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYC 398
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VKPDVI 325
KA ++ L + +M G ++VT N +I +C E A + + V+PD++
Sbjct: 399 KANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIV 458
Query: 326 GYNVFLGWLCKEG-----------------------------------KWSEAMDLFHDM 350
Y + L LC G K +A DLF +
Sbjct: 459 SYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSL 518
Query: 351 PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGN 409
P +G PDV TY + GLC+ EA ++ +M G++P N + EG+
Sbjct: 519 PLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGD 577
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 169/372 (45%), Gaps = 4/372 (1%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
+I + R Q S A+ + + ++ + ++LL+ ++ L + E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 147 A-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
PD T+ LI L A A L D M RG +P+ T+G +++ LC+ A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
L +M K+E V I+ +I +CK + A + EM KG++ + Y++LI+
Sbjct: 246 NLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPD 323
L G+ +A ++L +M E N VT N +I + +E F EA ++ D + + PD
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
+ YN + C + +A +F M + C PDVVTY TL G C+ ++ + +
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424
Query: 384 EMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPE 443
EM +G + + L +G+ + V + S G + + ++L +C
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 484
Query: 444 KVPESFELLDAL 455
K+ ++ E+ D +
Sbjct: 485 KLEKALEVFDYM 496
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 161/356 (45%), Gaps = 4/356 (1%)
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDAC-TYNILIR 158
A+ F + R ++ FN LL A+ ++FD V L + TYNILI
Sbjct: 69 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILIN 128
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
C R A L +M G P T +L++ C R+ +A L ++M E
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV-EMGYR 187
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
+T LI G+ + S A + D MV++G + + Y ++N L K G + AL +
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 279 LEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCK 336
L +M E + V N +I C+ + ++A + +E G++P+V+ Y+ + LC
Sbjct: 248 LNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCS 307
Query: 337 EGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN 396
G+WS+A L DM + P++VT+ L D + +F EA + D+M+ + P
Sbjct: 308 YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFT 367
Query: 397 LNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
N+ V+ C + + + SK + ++ ++ CK ++V + EL
Sbjct: 368 YNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 156/326 (47%), Gaps = 4/326 (1%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
+I + R A+ F + + + + ++++L+ L + ++ ++L + E
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 325
Query: 147 A-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
P+ T+N LI A G A +L+D+M R + PD T+ +L++ C + RL +A
Sbjct: 326 INPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAK 385
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
++ E M + VT Y LIKG CK + + EM +GL D Y TLI
Sbjct: 386 QMFEFMVSKDCFPDVVT-YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQG 444
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VKPD 323
LF G + A +V ++M G + +T ++++ C E+A + D ++ +K D
Sbjct: 445 LFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 504
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
+ Y + +CK GK + DLF + +G P+VVTY T+ GLC R +EA +L
Sbjct: 505 IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLK 564
Query: 384 EMMFKGYAPLSKNLNAFVSELCQEGN 409
+M G P S N + ++G+
Sbjct: 565 KMKEDGPLPNSGTYNTLIRAHLRDGD 590
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 173/400 (43%), Gaps = 49/400 (12%)
Query: 96 QPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELA------ARAGEFGAPD 149
+ S AV + CQ L ++ +++ L C++ D T+LA A + A D
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGL--CKRGD--TDLALNLLNKMEAAKIEA-D 259
Query: 150 ACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKE 209
+N +I + C H D A LF EM ++G+RP+ T+ +LI LC R +A +L
Sbjct: 260 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 210 EMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKA 269
+M E K+ + + LI K G+ A ++ D+M+K+ + D YN+L+N
Sbjct: 320 DMI-EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH 378
Query: 270 GKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRIL--------------- 314
+ ++A ++ E M C + VT N +I +C+ E+ +
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 438
Query: 315 ---------DG-------------VEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPR 352
DG +GV PD++ Y++ L LC GK +A+++F M +
Sbjct: 439 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 498
Query: 353 RGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFEL 412
D+ Y T+ +G+C+ + + + + KG P N +S LC + +
Sbjct: 499 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 558
Query: 413 LSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+L + G + N G ++ ++ + S EL+
Sbjct: 559 AYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELI 598
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 143/319 (44%), Gaps = 6/319 (1%)
Query: 140 ARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENS 199
RA G+ D Y ++R D A LF M P F L+ + +
Sbjct: 43 GRAFSSGSGD---YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMK 99
Query: 200 RLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALY 259
+ L E+M R + G T Y LI C+ ++S A + +M+K G +
Sbjct: 100 KFDVVISLGEKMQRLEIVHGLYT-YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTL 158
Query: 260 NTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV-- 317
++L+N + +A+ ++++M E G +++T +I N EA ++D +
Sbjct: 159 SSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
Query: 318 EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFRE 377
G +P+++ Y V + LCK G A++L + M DVV + T+ D LC++R +
Sbjct: 219 RGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDD 278
Query: 378 AVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLS 437
A+ + EM KG P ++ +S LC G + S +LSD+ K N ++ ++
Sbjct: 279 ALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALID 338
Query: 438 MVCKPEKVPESFELLDALV 456
K K E+ +L D ++
Sbjct: 339 AFVKEGKFVEAEKLYDDMI 357
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 170/372 (45%), Gaps = 4/372 (1%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
+I + R Q S A+ + + ++ + ++LL+ ++ L + E G
Sbjct: 51 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 110
Query: 147 A-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
PD T+ LI L A A L D M RG +P+ T+G +++ LC+ + AF
Sbjct: 111 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 170
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
L +M K+E V I+ +I +CK + A + EM KG++ + Y++LI+
Sbjct: 171 NLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPD 323
L G+ +A ++L +M E N VT N +I + +E F EA ++ D + + PD
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
+ YN + C + +A +F M + C PD+ TY TL G C+ ++ + +
Sbjct: 290 IFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFR 349
Query: 384 EMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPE 443
EM +G + + L +G+ + V + S G + + ++L +C
Sbjct: 350 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNG 409
Query: 444 KVPESFELLDAL 455
K+ ++ E+ D +
Sbjct: 410 KLEKALEVFDYM 421
Score = 145 bits (366), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 156/337 (46%), Gaps = 4/337 (1%)
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMR 177
FN LL A+ ++FD V L + G + + TYNILI C R A L +M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGEL 237
G P T +L++ C R+ +A L ++M E +T LI G+ +
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV-EMGYRPDTITFTTLIHGLFLHNKA 131
Query: 238 SWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVM 297
S A + D MV++G + + Y ++N L K G + A +L +M E + V N +
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 298 IGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGC 355
I C+ + ++A + +E G++P+V+ Y+ + LC G+WS+A L DM +
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 356 APDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLST 415
P++VT+ L D + +F EA + D+M+ + P N+ ++ C +
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 416 VLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+ + SK + ++ ++ CK ++V + EL
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 348
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 155/329 (47%), Gaps = 10/329 (3%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
+I + R A+ F + + + + ++++L+ L + ++ ++L + E
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 147 A-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
P+ T+N LI A G A +L D+M R + PD T+ +LI+ C + RL +A
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKA- 309
Query: 206 ELKEEMFREFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTL 262
++MF + C + Y LIKG CK + + EM +GL D Y TL
Sbjct: 310 ---KQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 263 INALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--V 320
I LF G + A +V ++M G + +T ++++ C E+A + D ++ +
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 321 KPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVV 380
K D+ Y + +CK GK + DLF + +G P+VVTY T+ GLC R +EA
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 381 VLDEMMFKGYAPLSKNLNAFVSELCQEGN 409
+L +M G P S N + ++G+
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLIRAHLRDGD 515
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/526 (21%), Positives = 205/526 (38%), Gaps = 77/526 (14%)
Query: 1 MATPKPI-SPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAK 59
M +P+ S F + LL S F L ++ + H+L +Y+++I R
Sbjct: 1 MVKSRPLPSIFEFNKLL-SAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 59
Query: 60 MLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSF 119
+ +L ++ + + L ++ Y ++ S AV + + +F
Sbjct: 60 QISLALALLGKM-MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITF 118
Query: 120 NTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRG-------------- 164
TL+H L + L R + G P+ TY +++ C RG
Sbjct: 119 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 178
Query: 165 ---------------------HADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLRE 203
H D A LF EM ++G+RP+ T+ +LI LC R +
Sbjct: 179 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 238
Query: 204 AFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLI 263
A +L +M E K+ + + LI K G+ A ++ D+M+K+ + D YN+LI
Sbjct: 239 ASQLLSDMI-EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297
Query: 264 NALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRIL--------- 314
N + ++A ++ E M C + T N +I +C+ E+ +
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357
Query: 315 ---------------DG-------------VEGVKPDVIGYNVFLGWLCKEGKWSEAMDL 346
DG +GV PD++ Y++ L LC GK +A+++
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417
Query: 347 FHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQ 406
F M + D+ Y T+ +G+C+ + + + + KG P N +S LC
Sbjct: 418 FDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCS 477
Query: 407 EGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+ + +L + G + + G ++ ++ + S EL+
Sbjct: 478 KRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELI 523
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 134/309 (43%), Gaps = 34/309 (11%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P +N L+ A D L ++M+ G+ + T+ LI+ C S++ A L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+M + E + ++L+ G C +S A + D+MV+ G + D + TLI+ LF
Sbjct: 68 LGKMMK-LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLF 126
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGY 327
K EA+ +++ M + GC+ P+++ Y
Sbjct: 127 LHNKASEAVALVDRMVQRGCQ---------------------------------PNLVTY 153
Query: 328 NVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMF 387
V + LCK G A +L + M DVV + T+ D LC++R +A+ + EM
Sbjct: 154 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMET 213
Query: 388 KGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPE 447
KG P ++ +S LC G + S +LSD+ K N ++ ++ K K E
Sbjct: 214 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 273
Query: 448 SFELLDALV 456
+ +L D ++
Sbjct: 274 AEKLHDDMI 282
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 128/295 (43%), Gaps = 39/295 (13%)
Query: 98 SRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNIL 156
S A Q + + L +FN L+ A + +F +L + PD TYN L
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Query: 157 IRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM----- 211
I C+ D+A ++F+ M S+ PD T+ TLI C++ R+ + EL EM
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Query: 212 --------------------------FREFKLEGC---VTIYTNLIKGVCKIGELSWAFR 242
F++ +G + Y+ L+ G+C G+L A
Sbjct: 357 VGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALE 416
Query: 243 IKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYC 302
+ D M K +KLD +Y T+I + KAGK ++ + + G + N VT N MI C
Sbjct: 417 VFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLC 476
Query: 303 RENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGC 355
+ +EAY +L + +G PD YN + ++G + + +L +M R C
Sbjct: 477 SKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREM--RSC 529
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/356 (27%), Positives = 162/356 (45%), Gaps = 4/356 (1%)
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIR 158
AV F + R ++ F+ LL A+ +FD V L + G + + TY+ILI
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
C R A + +M G PD T +L++ C +R+ +A L +M E +
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMV-EMGYQ 183
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
+ LI G+ + S A + D MV KG + D Y ++N L K G + AL +
Sbjct: 184 PDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSL 243
Query: 279 LEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCK 336
L++M +G E V N +I C N +A + ++ G++P+V+ YN + LC
Sbjct: 244 LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCN 303
Query: 337 EGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN 396
G+WS+A L DM R P+VVT+ L D + + EA + DEM+ + P
Sbjct: 304 YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 363
Query: 397 LNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
++ ++ C + + + SK N ++ ++ CK ++V E EL
Sbjct: 364 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 166/372 (44%), Gaps = 4/372 (1%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
+I + R Q S A+ + + + + N+LL+ + L + E G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 147 -APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
PD+ T+N LI A A L D M +G +PD T+G +++ LC+ + A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
L ++M + K+E V IY +I +C ++ A + EM KG++ + YN+LI
Sbjct: 242 SLLKKM-EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPD 323
L G+ +A R+L +M E N VT + +I + +E EA ++ D + + PD
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
+ Y+ + C + EA +F M + C P+VVTY TL G C+ ++ E + +
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 384 EMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPE 443
EM +G + + Q + V + S G + + + ++L +C
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 444 KVPESFELLDAL 455
KV + + + L
Sbjct: 481 KVETALVVFEYL 492
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 153/326 (46%), Gaps = 4/326 (1%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLT-CRQFDAVTELAARAGEF 145
+I + + A+ F + + + + ++N+L+ L R DA L+
Sbjct: 262 IIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERK 321
Query: 146 GAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
P+ T++ LI A G A +L+DEM R + PD T+ +LI+ C + RL EA
Sbjct: 322 INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAK 381
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
+ E M + VT Y LIKG CK + + EM ++GL + Y TLI+
Sbjct: 382 HMFELMISKDCFPNVVT-YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHG 440
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVK--PD 323
F+A + + A V ++M G + +T ++++ C E A + + ++ K PD
Sbjct: 441 FFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPD 500
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
+ YN+ + +CK GK + DLF + +G P+VVTY T+ G CR EA +
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFR 560
Query: 384 EMMFKGYAPLSKNLNAFVSELCQEGN 409
EM +G P S N + ++G+
Sbjct: 561 EMKEEGPLPDSGTYNTLIRAHLRDGD 586
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 117/525 (22%), Positives = 199/525 (37%), Gaps = 75/525 (14%)
Query: 1 MATPKPISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKM 60
M +P S L S F L ++ Q + H+L +Y ++I R
Sbjct: 72 MVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQ 131
Query: 61 LPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFN 120
L VL ++ + + L ++ + + S AV + Q +FN
Sbjct: 132 LSLALAVLAKM-MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFN 190
Query: 121 TLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHAD------------ 167
TL+H L + L R G PD TY I++ C RG D
Sbjct: 191 TLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQG 250
Query: 168 -----------------------RAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREA 204
A LF EM ++G+RP+ T+ +LI LC R +A
Sbjct: 251 KIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDA 310
Query: 205 FELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLIN 264
L +M E K+ V ++ LI K G+L A ++ DEM+K+ + D Y++LIN
Sbjct: 311 SRLLSDMI-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Query: 265 ALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV------- 317
+ +EA + E M C N VT N +I +C+ +E + +
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Query: 318 ------------------------------EGVKPDVIGYNVFLGWLCKEGKWSEAMDLF 347
+GV PD++ Y++ L LC GK A+ +F
Sbjct: 430 NTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVF 489
Query: 348 HDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQE 407
+ R PD+ TY + +G+C+ + + + + KG P +S C++
Sbjct: 490 EYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRK 549
Query: 408 GNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
G E + ++ +G + + G ++ ++ + S EL+
Sbjct: 550 GLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELI 594
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 136/292 (46%), Gaps = 3/292 (1%)
Query: 167 DRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTN 226
D A LF +M P F L+ + + ++ L E+M + + + Y+
Sbjct: 63 DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQM-QNLGISHNLYTYSI 121
Query: 227 LIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGG 286
LI C+ +LS A + +M+K G + D N+L+N + +A+ ++ +M E G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 287 CEWNSVTCNVMIGEYCRENNFEEAYRILDG--VEGVKPDVIGYNVFLGWLCKEGKWSEAM 344
+ +S T N +I R N EA ++D V+G +PD++ Y + + LCK G A+
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 345 DLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSEL 404
L M + P VV Y T+ D LC ++ +A+ + EM KG P N+ + L
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 301
Query: 405 CQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
C G + S +LSD+ + N + ++ K K+ E+ +L D ++
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 61/136 (44%)
Query: 322 PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVV 381
P ++ ++ L + K K+ + L M G + ++ TY L + CR Q A+ V
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138
Query: 382 LDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCK 441
L +MM GY P LN+ ++ C +++ + G + ++ ++ + +
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198
Query: 442 PEKVPESFELLDALVL 457
+ E+ L+D +V+
Sbjct: 199 HNRASEAVALVDRMVV 214
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 163/344 (47%), Gaps = 4/344 (1%)
Query: 115 TLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELF 173
++ F +L + +FD V L + G + D ++ ILI C A L
Sbjct: 78 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137
Query: 174 DEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCK 233
+M G RP T G+L++ C+ +R +EA L + M F V IY +I G+CK
Sbjct: 138 GKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM-DGFGFVPNVVIYNTVINGLCK 196
Query: 234 IGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
+L+ A + M KKG++ DA YNTLI+ L +G+ +A R+L +M + + N +
Sbjct: 197 NRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIF 256
Query: 294 CNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
+I + +E N EA + + V P+V YN + C G +A +F M
Sbjct: 257 FTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMV 316
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
+GC PDVVTY TL G C+ ++ + + + EM ++G + N + CQ G
Sbjct: 317 SKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 412 LLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
+ V + + G + ++++L +C K+ ++ +++ L
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 156/349 (44%), Gaps = 4/349 (1%)
Query: 91 YARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PD 149
+ + + AV S+ F + +NT+++ L R + E+ + G D
Sbjct: 159 FCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRAD 218
Query: 150 ACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKE 209
A TYN LI G A L +M R + P+ F LI + L EA L +
Sbjct: 219 AVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYK 278
Query: 210 EMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKA 269
EM R + T Y +LI G C G L A + D MV KG D YNTLI K+
Sbjct: 279 EMIRRSVVPNVFT-YNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 337
Query: 270 GKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGY 327
+ E+ +++ EM G ++ T N +I YC+ A ++ + + GV PD++ Y
Sbjct: 338 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY 397
Query: 328 NVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMF 387
N+ L LC GK +A+ + D+ + D++TY + GLCR + +EA + +
Sbjct: 398 NILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTR 457
Query: 388 KGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVL 436
KG P + +S LC++G + + G + +E I+D L
Sbjct: 458 KGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETL 506
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/131 (22%), Positives = 62/131 (47%)
Query: 322 PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVV 381
P ++ + L + K K+ + L+H M G + D+ ++ L CR + A+ +
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALAL 136
Query: 382 LDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCK 441
L +MM G+ P L + ++ CQ F+ +++ + G + N I++ V++ +CK
Sbjct: 137 LGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCK 196
Query: 442 PEKVPESFELL 452
+ + E+
Sbjct: 197 NRDLNNALEVF 207
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 188/421 (44%), Gaps = 52/421 (12%)
Query: 84 LCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLL-----------------HAL 126
C +I+ YA+ +AV++F + F C+ + ++N +L + +
Sbjct: 130 FCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEM 189
Query: 127 LTC--------------------RQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHA 166
L C R DA G +P+ TY ILI C RG A
Sbjct: 190 LKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSA 249
Query: 167 DRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTI--- 223
D A +LF EM++ G PD L+ C+ R+ EAFEL R F+ +G V
Sbjct: 250 DDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFEL----LRLFEKDGFVLGLRG 305
Query: 224 YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMR 283
Y++LI G+ + + AF + M+KK +K D LY LI L KAGK E+AL++L M
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 284 EGGCEWNSVTCNVMIGEYCRENNFEEAYRI---LDGVEGVKPDVIGYNVFLGWLCKEGKW 340
G ++ N +I C EE + + E PD + + + +C+ G
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESF-PDACTHTILICSMCRNGLV 424
Query: 341 SEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP----LSKN 396
EA ++F ++ + GC+P V T+ L DGLC+ + +EA ++L +M A LS +
Sbjct: 425 REAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHS 484
Query: 397 LNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
N + + G+ L+ G + ++V+++ C+ + + +LL+ L
Sbjct: 485 GNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQ 544
Query: 457 L 457
L
Sbjct: 545 L 545
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 130/268 (48%), Gaps = 8/268 (2%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLC-ENSRLREAFEL 207
D+ + +LI A G A++A E F M+ RPD T+ ++ + E AF +
Sbjct: 126 DSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAV 185
Query: 208 KEEMFREFKLEGCVTIYT--NLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
EM K +YT L+ G+ K G S A ++ D+M +G+ + Y LI+
Sbjct: 186 YNEM---LKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISG 242
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPD 323
L + G ++A ++ EM+ G +SV N ++ +C+ EA+ +L E G
Sbjct: 243 LCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLG 302
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
+ GY+ + L + ++++A +L+ +M ++ PD++ Y L GL + + +A+ +L
Sbjct: 303 LRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLS 362
Query: 384 EMMFKGYAPLSKNLNAFVSELCQEGNFE 411
M KG +P + NA + LC G E
Sbjct: 363 SMPSKGISPDTYCYNAVIKALCGRGLLE 390
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 139/292 (47%), Gaps = 16/292 (5%)
Query: 93 RARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQF-DAVTELAARAGEFGAPDAC 151
RAR+ ++A + + ++ + + + L+ L + DA+ L++ + +PD
Sbjct: 315 RARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTY 374
Query: 152 TYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM 211
YN +I+A C RG + L EM PD T LI +C N +REA EE+
Sbjct: 375 CYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREA----EEI 430
Query: 212 FREFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEM-VKKGLKLDAALY---NTLIN 264
F E + GC V + LI G+CK GEL A + +M V + L L N +
Sbjct: 431 FTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFD 490
Query: 265 ALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILD--GVEGVKP 322
+ ++G +A R L + G + V+ NV+I +CR + + A ++L+ ++G+ P
Sbjct: 491 TMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSP 550
Query: 323 DVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQ 374
D + YN + L + G+ EA LF+ +P V YR+L CR R+
Sbjct: 551 DSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV--YRSLMTWSCRKRK 600
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 89/179 (49%), Gaps = 3/179 (1%)
Query: 277 RVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWL 334
+ LEE++ GG +S V+I Y + E+A ++ +PDV YNV L +
Sbjct: 113 QTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVM 172
Query: 335 CKEGKWSE-AMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPL 393
+E + A ++++M + C+P++ T+ L DGL + + +A + D+M +G +P
Sbjct: 173 MREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPN 232
Query: 394 SKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+S LCQ G+ + + ++ + G + + +L CK ++ E+FELL
Sbjct: 233 RVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELL 291
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 131/309 (42%), Gaps = 41/309 (13%)
Query: 117 KSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEM 176
+SF+T++ + A +LA A +PD +YN+LI C G D A +L + +
Sbjct: 487 RSFDTMVE---SGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVL 543
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
+ +G+ PD T+ TLI+ L R EAF+L + + +Y +L+ C+ +
Sbjct: 544 QLKGLSPDSVTYNTLINGLHRVGREEEAFKL---FYAKDDFRHSPAVYRSLMTWSCRKRK 600
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
+ AF + + +KK LD N I FK G+ E ALR L E+ ++ +
Sbjct: 601 VLVAFNLWMKYLKKISCLDDETANE-IEQCFKEGETERALRRLIEL-------DTRKDEL 652
Query: 297 MIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCA 356
+G Y ++L LC+ G++ EA+ +F + +
Sbjct: 653 TLGP--------------------------YTIWLIGLCQSGRFHEALMVFSVLREKKIL 686
Query: 357 PDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEG-NFELLST 415
+ L GLC+ Q A+ V + + + + N +S L + E++S
Sbjct: 687 VTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRVCNYLLSSLLESTEKMEIVSQ 746
Query: 416 VLSDLTSKG 424
+ + + G
Sbjct: 747 LTNRMERAG 755
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 152/310 (49%), Gaps = 3/310 (0%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD T+N LI+ L G A L D M G +PD T+ ++++ +C + A +L
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+M E ++ V Y+ +I +C+ G + A + EM KG+K YN+L+ L
Sbjct: 216 LRKM-EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVI 325
KAGK + +L++M N +T NV++ + +E +EA + + G+ P++I
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
YN + C + + SEA ++ M R C+PD+VT+ +L G C ++ + + V +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKV 445
+G + + V CQ G +L + ++ S G + + + ++L +C K+
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 446 PESFELLDAL 455
++ E+ + L
Sbjct: 455 EKALEIFEDL 464
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 172/363 (47%), Gaps = 10/363 (2%)
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIR 158
A+ F + R +L F+ A+ +QF+ V + + G A + T NI+I
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
C A+ + ++ G PD TF TLI L ++ EA L + M
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN---- 187
Query: 219 GC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEA 275
GC V Y +++ G+C+ G+ S A + +M ++ +K D Y+T+I++L + G + A
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 276 LRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VKPDVIGYNVFLGW 333
+ + +EM G + + VT N ++ C+ + + +L + + P+VI +NV L
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 334 LCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPL 393
KEGK EA +L+ +M RG +P+++TY TL DG C + EA +LD M+ +P
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367
Query: 394 SKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLD 453
+ + C + V +++ +G + N + +++ C+ K+ + EL
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427
Query: 454 ALV 456
+V
Sbjct: 428 EMV 430
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 166/348 (47%), Gaps = 4/348 (1%)
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQF-DAVTELAARAGEFGAPDACTYNILIR 158
A+ F + + + ++ ++N+L+ L ++ D L P+ T+N+L+
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
G A EL+ EM +RG+ P+ T+ TL+ C +RL EA + + M R K
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN-KCS 365
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
+ +T+LIKG C + + ++ + K+GL +A Y+ L+ ++GK + A +
Sbjct: 366 PDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEEL 425
Query: 279 LEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPD--VIGYNVFLGWLCK 336
+EM G + +T +++ C E+A I + ++ K D ++ Y + +CK
Sbjct: 426 FQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCK 485
Query: 337 EGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN 396
GK +A +LF +P +G P+V+TY + GLC+ EA ++L +M G AP
Sbjct: 486 GGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCT 545
Query: 397 LNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEK 444
N + ++G+ + ++ ++ S G + +V+ M+ K
Sbjct: 546 YNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 593
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 174/380 (45%), Gaps = 14/380 (3%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRC--QRTLK----SFNTLLHALLTCRQ--FDAVTEL 138
V+T+ + R+ T L++ R +R +K +++T++ +L CR DA L
Sbjct: 193 VVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSL--CRDGCIDAAISL 250
Query: 139 AARAGEFGAPDAC-TYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCE 197
G + TYN L+R C G + L +M SR + P+ TF L+ +
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVK 310
Query: 198 NSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAA 257
+L+EA EL +EM +T Y L+ G C LS A + D MV+ D
Sbjct: 311 EGKLQEANELYKEMITRGISPNIIT-YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIV 369
Query: 258 LYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV 317
+ +LI + ++ ++V + + G N+VT ++++ +C+ + A + +
Sbjct: 370 TFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEM 429
Query: 318 --EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQF 375
GV PDV+ Y + L LC GK +A+++F D+ + +V Y T+ +G+C+ +
Sbjct: 430 VSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKV 489
Query: 376 REAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVV 435
+A + + KG P +S LC++G+ + +L + G N+ ++ +
Sbjct: 490 EDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549
Query: 436 LSMVCKPEKVPESFELLDAL 455
+ + + S +L++ +
Sbjct: 550 IRAHLRDGDLTASAKLIEEM 569
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 132/304 (43%), Gaps = 42/304 (13%)
Query: 157 IRASCLRGHADRAFELFDEM-RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREF 215
+R+ + D A LF EM RSR + P F + + F L + ++
Sbjct: 60 LRSGIVDIKKDDAIALFQEMIRSRPL-PSLVDFSRFFSAIARTKQ----FNLVLDFCKQL 114
Query: 216 KLEGCV-TIYT--NLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKK 272
+L G IYT +I C+ + +A+ + +++K G + D +NTLI LF GK
Sbjct: 115 ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKV 174
Query: 273 EEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLG 332
EA+ +++ M E GC+ PDV+ YN +
Sbjct: 175 SEAVVLVDRMVENGCQ---------------------------------PDVVTYNSIVN 201
Query: 333 WLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
+C+ G S A+DL M R DV TY T+ D LCR A+ + EM KG
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261
Query: 393 LSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
N+ V LC+ G + + +L D+ S+ + N ++V+L + K K+ E+ EL
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 453 DALV 456
++
Sbjct: 322 KEMI 325
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 87/232 (37%), Gaps = 70/232 (30%)
Query: 111 RCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRA 169
+C + +F +L+ ++ D ++ + G +A TY+IL++ C G A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 170 FELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE-------------------LKEE 210
ELF EM S GV PD T+G L+ LC+N +L +A E + E
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Query: 211 MFREFKLEGC---------------VTIYTNLIKGVCKIGELSWA--------------- 240
M + K+E V YT +I G+CK G LS A
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542
Query: 241 --------------------FRIKDEMVKKGLKLDAALYNTLINALFKAGKK 272
++ +EM G DA+ +I+ L A K+
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKR 594
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 153/310 (49%), Gaps = 7/310 (2%)
Query: 152 TYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM 211
TY +++ C G D A+ + EM + G RP+ + TLI +NSR +A + +EM
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 212 FREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGK 271
+E + + Y +LI G+ K + A EMV+ GLK +A Y I+ +A +
Sbjct: 479 -KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 272 KEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA---YR-ILDGVEGVKPDVIGY 327
A + ++EMRE G N V C +I EYC++ EA YR ++D +G+ D Y
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVD--QGILGDAKTY 595
Query: 328 NVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMF 387
V + L K K +A ++F +M +G APDV +Y L +G + ++A + DEM+
Sbjct: 596 TVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655
Query: 388 KGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPE 447
+G P N + C+ G E +L +++ KG N + ++ CK + E
Sbjct: 656 EGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAE 715
Query: 448 SFELLDALVL 457
+F L D + L
Sbjct: 716 AFRLFDEMKL 725
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 161/348 (46%), Gaps = 5/348 (1%)
Query: 112 CQRTLKSFNTLLHALLTCRQF-DAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAF 170
C+ + + TL+ L +F DA+ L + APD YN LI D A
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEAR 507
Query: 171 ELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKG 230
EM G++P+ T+G I E S A + +EM RE + + T LI
Sbjct: 508 SFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM-RECGVLPNKVLCTGLINE 566
Query: 231 VCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWN 290
CK G++ A MV +G+ DA Y L+N LFK K ++A + EMR G +
Sbjct: 567 YCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPD 626
Query: 291 SVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFH 348
+ V+I + + N ++A I D + EG+ P+VI YN+ LG C+ G+ +A +L
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686
Query: 349 DMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEG 408
+M +G P+ VTY T+ DG C+ EA + DEM KG P S V C+
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746
Query: 409 NFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ E T+ KG + ++ +++ V K K E+L+ L+
Sbjct: 747 DVERAITIFGT-NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLM 793
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/337 (29%), Positives = 159/337 (47%), Gaps = 14/337 (4%)
Query: 79 VPEPLLC-HVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTE 137
+P +LC +I Y + + A + S+ K++ L++ L + D E
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 138 LAARA-GEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLC 196
+ G+ APD +Y +LI G+ +A +FDEM G+ P+ + L+ C
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 197 ENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDA 256
+ + +A EL +EM + VT Y +I G CK G+L+ AFR+ DEM KGL D+
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVT-YCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDS 732
Query: 257 ALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCR----ENNFEEAYR 312
+Y TL++ + E A+ + ++G C ++ N +I + E E R
Sbjct: 733 FVYTTLVDGCCRLNDVERAITIFGTNKKG-CASSTAPFNALINWVFKFGKTELKTEVLNR 791
Query: 313 ILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLC 370
++DG KP+ + YN+ + +LCKEG A +LFH M P V+TY +L +G
Sbjct: 792 LMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYD 851
Query: 371 RWRQFREAVVVLDEMMFKGYAP----LSKNLNAFVSE 403
+ + E V DE + G P S +NAF+ E
Sbjct: 852 KMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKE 888
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 136/289 (47%), Gaps = 19/289 (6%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
P+ YN+L+ C G ++A EL DEM +G+ P+ T+ T+I C++ L EAF
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 207 LKEEMFREFKLEGCVT---IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLI 263
L F E KL+G V +YT L+ G C++ ++ A I KKG A +N LI
Sbjct: 719 L----FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTN-KKGCASSTAPFNALI 773
Query: 264 NALFKAGKKEEALRVLEEMREGGCEW----NSVTCNVMIGEYCRENNFEEAYRILDGVEG 319
N +FK GK E VL + +G + N VT N+MI C+E N E A + ++
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 320 VK--PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFRE 377
P VI Y L K G+ +E +F + G PD + Y + + + +
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTK 893
Query: 378 AVVVLDEMMFKGYAPLSKNLN-----AFVSELCQEGNFELLSTVLSDLT 421
A+V++D+M K L+ A +S + G E+ V+ ++
Sbjct: 894 ALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMV 942
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 143/338 (42%), Gaps = 4/338 (1%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFGAP-DACTYNILIRASCLRGHADRAFELFDEM 176
+++ L+ L ++ + L G D TY++LI +AD A L EM
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
S G+ + I + + + +A L + M L Y +LI+G C+
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIAS-GLIPQAQAYASLIEGYCREKN 397
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
+ + + EM K+ + + Y T++ + +G + A +++EM GC N V
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 297 MIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
+I + + + F +A R+L + +G+ PD+ YN + L K + EA +M G
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENG 517
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLS 414
P+ TY G +F A + EM G P ++E C++G
Sbjct: 518 LKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEAC 577
Query: 415 TVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+ + +G + + + V+++ + K +KV ++ E+
Sbjct: 578 SAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIF 615
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 125/317 (39%), Gaps = 31/317 (9%)
Query: 149 DACTYNILIRASCLRGHA----DRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREA 204
D TY++LI A C G+ D F+ E R+ + D A
Sbjct: 220 DVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGA------------------ 261
Query: 205 FELKEEMFREFKLEGCVTI---YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNT 261
+LKE M +G V + Y LI G+CKI L A + EM G+ LD Y+
Sbjct: 262 LKLKESMI----CKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSL 317
Query: 262 LINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EG 319
LI+ L K + A ++ EM G + I +E E+A + DG+ G
Sbjct: 318 LIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASG 377
Query: 320 VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAV 379
+ P Y + C+E + +L +M +R TY T+ G+C A
Sbjct: 378 LIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAY 437
Query: 380 VVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMV 439
++ EM+ G P + Q F VL ++ +G + ++ ++ +
Sbjct: 438 NIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGL 497
Query: 440 CKPEKVPESFELLDALV 456
K +++ E+ L +V
Sbjct: 498 SKAKRMDEARSFLVEMV 514
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/284 (20%), Positives = 124/284 (43%), Gaps = 13/284 (4%)
Query: 44 SLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPL-LCHVITFYARARQPSRAVQ 102
+++ Y++++ R+ + + +++L ++ + H P + C +I Y ++ + A +
Sbjct: 661 NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH--PNAVTYCTIIDGYCKSGDLAEAFR 718
Query: 103 TFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCL 162
F + + TL+ + + + A +N LI
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFK 778
Query: 163 RGHADRAFE----LFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
G + E L D R +P+ T+ +I LC+ L A EL +M + L
Sbjct: 779 FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM-QNANLM 837
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
V YT+L+ G K+G + F + DE + G++ D +Y+ +INA K G +AL +
Sbjct: 838 PTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVL 897
Query: 279 LEEM-----REGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV 317
+++M + GC+ + TC ++ + + E A ++++ +
Sbjct: 898 VDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 120/288 (41%), Gaps = 17/288 (5%)
Query: 167 DRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTN 226
D ++++ M R V D T+ LI C ++ ++ + +EF+ T N
Sbjct: 203 DLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFR-----TATLN 257
Query: 227 LIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGG 286
+ A ++K+ M+ KGL Y+ LI+ L K + E+A +L EM G
Sbjct: 258 V----------DGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLG 307
Query: 287 CEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAM 344
++ T +++I + N + A ++ + G+ Y+ + + KEG +A
Sbjct: 308 VSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAK 367
Query: 345 DLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSEL 404
LF M G P Y +L +G CR + R+ +L EM + V +
Sbjct: 368 ALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGM 427
Query: 405 CQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
C G+ + ++ ++ + G N I+ ++ + + ++ +L
Sbjct: 428 CSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVL 475
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 108/264 (40%), Gaps = 48/264 (18%)
Query: 46 LSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLL-CHVITFYARARQPSRAVQTF 104
++Y II ++ L E ++ ++ L + VP+ + ++ R RA+ F
Sbjct: 698 VTYCTIIDGYCKSGDLAEAFRLFDEMKL--KGLVPDSFVYTTLVDGCCRLNDVERAITIF 755
Query: 105 LSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGE-----FGAPDACTYNILIRA 159
C + FN L++ + + + TE+ R + FG P+ TYNI+I
Sbjct: 756 -GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDY 814
Query: 160 SCLRGHADRA-----------------------------------FELFDEMRSRGVRPD 184
C G+ + A F +FDE + G+ PD
Sbjct: 815 LCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPD 874
Query: 185 QATFGTLIHRLCENSRLREAFELKEEMFREFKLE-GC-VTIYT--NLIKGVCKIGELSWA 240
+ +I+ + +A L ++MF + ++ GC ++I T L+ G K+GE+ A
Sbjct: 875 HIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVA 934
Query: 241 FRIKDEMVKKGLKLDAALYNTLIN 264
++ + MV+ D+A LIN
Sbjct: 935 EKVMENMVRLQYIPDSATVIELIN 958
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 167/356 (46%), Gaps = 4/356 (1%)
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIR 158
AV F + R ++ FN LL A+ +F+ V L + G + D TY+I I
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
C R A + +M G PD T +L++ C + R+ +A L ++M E +
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV-EMGYK 185
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
+T LI G+ + S A + D+MV++G + D Y T++N L K G + AL +
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 279 LEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCK 336
L +M + N V N +I C+ + E A + +E G++P+V+ YN + LC
Sbjct: 246 LNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCN 305
Query: 337 EGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN 396
G+WS+A L +M + P+VVT+ L D + + EA + +EM+ + P +
Sbjct: 306 YGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTIT 365
Query: 397 LNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
N ++ C + + + SK + N ++ +++ CK ++V + EL
Sbjct: 366 YNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421
Score = 144 bits (364), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 165/371 (44%), Gaps = 4/371 (1%)
Query: 88 ITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG- 146
I + R Q S A+ + + + + ++LL+ ++ L + E G
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
PD T+ LI L A A L D+M RG +PD T+GT+++ LC+ + A
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
L +M +++ V I+ +I +CK + A + EM KG++ + YN+LIN L
Sbjct: 245 LLNKM-EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDV 324
G+ +A R+L M E N VT N +I + +E EA ++ + + + PD
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 325 IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDE 384
I YN+ + C + EA +F M + C P++ TY TL +G C+ ++ + V + E
Sbjct: 364 ITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFRE 423
Query: 385 MMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEK 444
M +G + + Q G+ + V + S + + ++L +C K
Sbjct: 424 MSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGK 483
Query: 445 VPESFELLDAL 455
+ + + L
Sbjct: 484 LDTALVIFKYL 494
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 193/436 (44%), Gaps = 11/436 (2%)
Query: 26 FQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLC 85
F+L ++ Q H L +Y + I R L VL ++ + + L
Sbjct: 99 FELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKM-MKLGYEPDIVTLS 157
Query: 86 HVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEF 145
++ Y +++ S AV + + +F TL+H L + L + +
Sbjct: 158 SLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQR 217
Query: 146 GA-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREA 204
G PD TY ++ C RG D A L ++M + ++ + F T+I LC+ + A
Sbjct: 218 GCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVA 277
Query: 205 FELKEEMFREFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNT 261
+L F E + +G V Y +LI +C G S A R+ M++K + + +N
Sbjct: 278 VDL----FTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNA 333
Query: 262 LINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EG 319
LI+A FK GK EA ++ EEM + + +++T N++I +C N +EA ++ + +
Sbjct: 334 LIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKD 393
Query: 320 VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAV 379
P++ YN + CK + + ++LF +M +RG + VTY T+ G + A
Sbjct: 394 CLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQ 453
Query: 380 VVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMV 439
+V +M+ + + LC G + + L N I++ ++ +
Sbjct: 454 MVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGM 513
Query: 440 CKPEKVPESFELLDAL 455
CK KV E+++L +L
Sbjct: 514 CKAGKVGEAWDLFCSL 529
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 185/411 (45%), Gaps = 14/411 (3%)
Query: 35 QTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARA 94
Q R + L++Y ++ L + + +L+++ R + + +I +
Sbjct: 213 QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEA-ARIKANVVIFNTIIDSLCKY 271
Query: 95 RQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTY 153
R AV F + + + + ++N+L++ L ++ + L + E P+ T+
Sbjct: 272 RHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTF 331
Query: 154 NILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFR 213
N LI A G A +L +EM R + PD T+ LI+ C ++RL EA ++MF+
Sbjct: 332 NALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEA----KQMFK 387
Query: 214 EFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAG 270
+ C + Y LI G CK + + EM ++GL + Y T+I F+AG
Sbjct: 388 FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447
Query: 271 KKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VKPDVIGYN 328
+ A V ++M + +T ++++ C + A I ++ ++ ++ YN
Sbjct: 448 DCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYN 507
Query: 329 VFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFK 388
+ +CK GK EA DLF + + PDVVTY T+ GLC R +EA + +M
Sbjct: 508 TMIEGMCKAGKVGEAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKED 564
Query: 389 GYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMV 439
G P S N + ++ + + ++ ++ S G + + +V +M+
Sbjct: 565 GTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML 615
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 124/264 (46%), Gaps = 3/264 (1%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD TYN+LI C+ D A ++F M S+ P+ T+ TLI+ C+ R+ + EL
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
EM + L G YT +I+G + G+ A + +MV + D Y+ L++ L
Sbjct: 421 FREMSQR-GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLC 479
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGY 327
GK + AL + + +++ E N N MI C+ EA+ + + +KPDV+ Y
Sbjct: 480 SYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS-IKPDVVTY 538
Query: 328 NVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMF 387
N + LC + EA DLF M G P+ TY TL R + ++ EM
Sbjct: 539 NTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRS 598
Query: 388 KGYAPLSKNLNAFVSELCQEGNFE 411
G+ + + + V+ + +G +
Sbjct: 599 SGFVGDASTI-SLVTNMLHDGRLD 621
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 135/309 (43%), Gaps = 34/309 (11%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P +N L+ A + L ++M++ G+ D T+ I+ C S+L A +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+M + E + ++L+ G C +S A + D+MV+ G K D + TLI+ LF
Sbjct: 141 LAKMMK-LGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLF 199
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGY 327
K EA+ ++++M + GC+ PD++ Y
Sbjct: 200 LHNKASEAVALVDQMVQRGCQ---------------------------------PDLVTY 226
Query: 328 NVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMF 387
+ LCK G A++L + M +VV + T+ D LC++R AV + EM
Sbjct: 227 GTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMET 286
Query: 388 KGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPE 447
KG P N+ ++ LC G + S +LS++ K N ++ ++ K K+ E
Sbjct: 287 KGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVE 346
Query: 448 SFELLDALV 456
+ +L + ++
Sbjct: 347 AEKLHEEMI 355
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 156/339 (46%), Gaps = 9/339 (2%)
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMR 177
+N L+ + + + E+ G + + TYN LI+ C G AD A L EM
Sbjct: 368 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 427
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKEEMF-REFKLEGCVTIYTNLIKGVCKIGE 236
S G +Q +F ++I LC + A EM R G + T LI G+CK G+
Sbjct: 428 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG--GLLTTLISGLCKHGK 485
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
S A + + + KG +D N L++ L +AGK +EA R+ +E+ GC + V+ N
Sbjct: 486 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 545
Query: 297 MIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
+I C + +EA+ LD + G+KPD Y++ + L K EA+ + D R G
Sbjct: 546 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 605
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLS 414
PDV TY + DG C+ + E DEMM K P + N + C+ G +
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665
Query: 415 TVLSDLTSKGKICNEGIWDVV---LSMVCKPEKVPESFE 450
+ D+ KG N + + +S++ + E+ FE
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 704
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 198/460 (43%), Gaps = 50/460 (10%)
Query: 39 RPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCH--VITFYARARQ 96
R +L++Y +++ L RAK + + VL ++ T+ P ++ + +I + A
Sbjct: 324 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM---TKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 97 PSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG---------- 146
++A++ + S T ++NTL+ Q D L G
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 147 --------------------------APDACTYNILIRASCLRGHADRAFELFDEMRSRG 180
+P LI C G +A EL+ + ++G
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500
Query: 181 VRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCV---TIYTNLIKGVCKIGEL 237
D T L+H LCE +L EAF +++E+ GCV Y LI G C +L
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR----GCVMDRVSYNTLISGCCGKKKL 556
Query: 238 SWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVM 297
AF DEMVK+GLK D Y+ LI LF K EEA++ ++ + G + T +VM
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 298 IGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGC 355
I C+ EE D + + V+P+ + YN + C+ G+ S A++L DM +G
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 356 APDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLST 415
+P+ TY +L G+ + EA ++ +EM +G P + A + + G +
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 736
Query: 416 VLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
+L ++ SK N+ + V++ + V E+ LL+ +
Sbjct: 737 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 161/344 (46%), Gaps = 13/344 (3%)
Query: 120 NTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSR 179
N LL +L+ +F E + +PD + I A C G + A +LF +M
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA 289
Query: 180 GVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSW 239
GV P+ TF T+I L R EAF KE+M E +E + Y+ L+KG+ + +
Sbjct: 290 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV-ERGMEPTLITYSILVKGLTRAKRIGD 348
Query: 240 AFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIG 299
A+ + EM KKG + +YN LI++ +AG +A+ + + M G S T N +I
Sbjct: 349 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 408
Query: 300 EYCRENNFEEAYRILDGVEGVKPDVIGYNVFLG-------WLCKEGKWSEAMDLFHDMPR 352
YC+ + A R+L + IG+NV G LC + A+ +M
Sbjct: 409 GYCKNGQADNAERLLKEMLS-----IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL 463
Query: 353 RGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFEL 412
R +P TL GLC+ + +A+ + + + KG+ ++ NA + LC+ G +
Sbjct: 464 RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 523
Query: 413 LSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ ++ +G + + ++ ++S C +K+ E+F LD +V
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 162/376 (43%), Gaps = 39/376 (10%)
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMR 177
F T ++A + + +L ++ E G AP+ T+N +I + G D AF ++M
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGEL 237
RG+ P T+ L+ L R+ +A+ + +EM ++ V +Y NLI + G L
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK-GFPPNVIVYNNLIDSFIEAGSL 381
Query: 238 SWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVM 297
+ A IKD MV KGL L ++ YNTLI K G+ + A R+L+EM G N + +
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441
Query: 298 IGEYCRENNFEEAYR-------------------ILDGV------------------EGV 320
I C F+ A R ++ G+ +G
Sbjct: 442 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
Query: 321 KPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVV 380
D N L LC+ GK EA + ++ RGC D V+Y TL G C ++ EA +
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 381 VLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVC 440
LDEM+ +G P + + + L E D G + + + V++ C
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 441 KPEKVPESFELLDALV 456
K E+ E E D ++
Sbjct: 622 KAERTEEGQEFFDEMM 637
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 147/329 (44%), Gaps = 4/329 (1%)
Query: 83 LLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARA 142
LL +I+ + + S+A++ + + ++ N LLH L + D +
Sbjct: 472 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531
Query: 143 -GEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRL 201
G D +YN LI C + D AF DEM RG++PD T+ LI L +++
Sbjct: 532 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591
Query: 202 REAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNT 261
EA + ++ R L T Y+ +I G CK DEM+ K ++ + +YN
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYT-YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 650
Query: 262 LINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EG 319
LI A ++G+ AL + E+M+ G NS T +I + EEA + + + EG
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 320 VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAV 379
++P+V Y + K G+ + L +M + P+ +TY + G R EA
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 380 VVLDEMMFKGYAPLSKNLNAFVSELCQEG 408
+L+EM KG P S F+ ++G
Sbjct: 771 RLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 141/303 (46%), Gaps = 7/303 (2%)
Query: 154 NILIRASCLRGHADR---AFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEE 210
++LI C + D A ++F + ++G+ P + T L+ L + ++ E +
Sbjct: 192 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 251
Query: 211 MFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAG 270
+ + + V ++T I CK G++ A ++ +M + G+ + +NT+I+ L G
Sbjct: 252 VCKGVSPD--VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309
Query: 271 KKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYN 328
+ +EA E+M E G E +T ++++ R +AY +L + +G P+VI YN
Sbjct: 310 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369
Query: 329 VFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFK 388
+ + G ++A+++ M +G + TY TL G C+ Q A +L EM+
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 389 GYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPES 448
G+ + + + LC F+ + ++ + G+ ++S +CK K ++
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 449 FEL 451
EL
Sbjct: 490 LEL 492
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 86/168 (51%), Gaps = 1/168 (0%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P+ YN LIRA C G A EL ++M+ +G+ P+ AT+ +LI + SR+ EA L
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLL 702
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
EEM E LE V YT LI G K+G++ + EM K + + Y +I
Sbjct: 703 FEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA 761
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILD 315
+ G EA R+L EMRE G +S+T I Y ++ EA++ D
Sbjct: 762 RDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSD 809
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 1/183 (0%)
Query: 275 ALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV-EGVKPDVIGYNVFLGW 333
AL V + G + TCN+++ R N F++ D V +GV PDV + +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINA 269
Query: 334 LCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPL 393
CK GK EA+ LF M G AP+VVT+ T+ DGL ++ EA + ++M+ +G P
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 394 SKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLD 453
+ V L + VL ++T KG N +++ ++ + + ++ E+ D
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 454 ALV 456
+V
Sbjct: 390 LMV 392
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/339 (29%), Positives = 156/339 (46%), Gaps = 9/339 (2%)
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMR 177
+N L+ + + + E+ G + + TYN LI+ C G AD A L EM
Sbjct: 368 YNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML 427
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKEEMF-REFKLEGCVTIYTNLIKGVCKIGE 236
S G +Q +F ++I LC + A EM R G + T LI G+CK G+
Sbjct: 428 SIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGG--GLLTTLISGLCKHGK 485
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
S A + + + KG +D N L++ L +AGK +EA R+ +E+ GC + V+ N
Sbjct: 486 HSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNT 545
Query: 297 MIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
+I C + +EA+ LD + G+KPD Y++ + L K EA+ + D R G
Sbjct: 546 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 605
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLS 414
PDV TY + DG C+ + E DEMM K P + N + C+ G +
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665
Query: 415 TVLSDLTSKGKICNEGIWDVV---LSMVCKPEKVPESFE 450
+ D+ KG N + + +S++ + E+ FE
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 704
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/460 (25%), Positives = 198/460 (43%), Gaps = 50/460 (10%)
Query: 39 RPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCH--VITFYARARQ 96
R +L++Y +++ L RAK + + VL ++ T+ P ++ + +I + A
Sbjct: 324 RGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM---TKKGFPPNVIVYNNLIDSFIEAGS 380
Query: 97 PSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG---------- 146
++A++ + S T ++NTL+ Q D L G
Sbjct: 381 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTS 440
Query: 147 --------------------------APDACTYNILIRASCLRGHADRAFELFDEMRSRG 180
+P LI C G +A EL+ + ++G
Sbjct: 441 VICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKG 500
Query: 181 VRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCV---TIYTNLIKGVCKIGEL 237
D T L+H LCE +L EAF +++E+ GCV Y LI G C +L
Sbjct: 501 FVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGR----GCVMDRVSYNTLISGCCGKKKL 556
Query: 238 SWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVM 297
AF DEMVK+GLK D Y+ LI LF K EEA++ ++ + G + T +VM
Sbjct: 557 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 616
Query: 298 IGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGC 355
I C+ EE D + + V+P+ + YN + C+ G+ S A++L DM +G
Sbjct: 617 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 676
Query: 356 APDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLST 415
+P+ TY +L G+ + EA ++ +EM +G P + A + + G +
Sbjct: 677 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVEC 736
Query: 416 VLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
+L ++ SK N+ + V++ + V E+ LL+ +
Sbjct: 737 LLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEM 776
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 161/344 (46%), Gaps = 13/344 (3%)
Query: 120 NTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSR 179
N LL +L+ +F E + +PD + I A C G + A +LF +M
Sbjct: 230 NILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEA 289
Query: 180 GVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSW 239
GV P+ TF T+I L R EAF KE+M E +E + Y+ L+KG+ + +
Sbjct: 290 GVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV-ERGMEPTLITYSILVKGLTRAKRIGD 348
Query: 240 AFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIG 299
A+ + EM KKG + +YN LI++ +AG +A+ + + M G S T N +I
Sbjct: 349 AYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIK 408
Query: 300 EYCRENNFEEAYRILDGVEGVKPDVIGYNVFLG-------WLCKEGKWSEAMDLFHDMPR 352
YC+ + A R+L + IG+NV G LC + A+ +M
Sbjct: 409 GYCKNGQADNAERLLKEMLS-----IGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL 463
Query: 353 RGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFEL 412
R +P TL GLC+ + +A+ + + + KG+ ++ NA + LC+ G +
Sbjct: 464 RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 523
Query: 413 LSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ ++ +G + + ++ ++S C +K+ E+F LD +V
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMV 567
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 162/376 (43%), Gaps = 39/376 (10%)
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMR 177
F T ++A + + +L ++ E G AP+ T+N +I + G D AF ++M
Sbjct: 263 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 322
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGEL 237
RG+ P T+ L+ L R+ +A+ + +EM ++ V +Y NLI + G L
Sbjct: 323 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKK-GFPPNVIVYNNLIDSFIEAGSL 381
Query: 238 SWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVM 297
+ A IKD MV KGL L ++ YNTLI K G+ + A R+L+EM G N + +
Sbjct: 382 NKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSV 441
Query: 298 IGEYCRENNFEEAYR-------------------ILDGV------------------EGV 320
I C F+ A R ++ G+ +G
Sbjct: 442 ICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF 501
Query: 321 KPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVV 380
D N L LC+ GK EA + ++ RGC D V+Y TL G C ++ EA +
Sbjct: 502 VVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFM 561
Query: 381 VLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVC 440
LDEM+ +G P + + + L E D G + + + V++ C
Sbjct: 562 FLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCC 621
Query: 441 KPEKVPESFELLDALV 456
K E+ E E D ++
Sbjct: 622 KAERTEEGQEFFDEMM 637
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 147/329 (44%), Gaps = 4/329 (1%)
Query: 83 LLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARA 142
LL +I+ + + S+A++ + + ++ N LLH L + D +
Sbjct: 472 LLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEI 531
Query: 143 -GEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRL 201
G D +YN LI C + D AF DEM RG++PD T+ LI L +++
Sbjct: 532 LGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKV 591
Query: 202 REAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNT 261
EA + ++ R L T Y+ +I G CK DEM+ K ++ + +YN
Sbjct: 592 EEAIQFWDDCKRNGMLPDVYT-YSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNH 650
Query: 262 LINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EG 319
LI A ++G+ AL + E+M+ G NS T +I + EEA + + + EG
Sbjct: 651 LIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG 710
Query: 320 VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAV 379
++P+V Y + K G+ + L +M + P+ +TY + G R EA
Sbjct: 711 LEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEAS 770
Query: 380 VVLDEMMFKGYAPLSKNLNAFVSELCQEG 408
+L+EM KG P S F+ ++G
Sbjct: 771 RLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 141/303 (46%), Gaps = 7/303 (2%)
Query: 154 NILIRASCLRGHADR---AFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEE 210
++LI C + D A ++F + ++G+ P + T L+ L + ++ E +
Sbjct: 192 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDV 251
Query: 211 MFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAG 270
+ + + V ++T I CK G++ A ++ +M + G+ + +NT+I+ L G
Sbjct: 252 VCKGVSPD--VYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCG 309
Query: 271 KKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYN 328
+ +EA E+M E G E +T ++++ R +AY +L + +G P+VI YN
Sbjct: 310 RYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYN 369
Query: 329 VFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFK 388
+ + G ++A+++ M +G + TY TL G C+ Q A +L EM+
Sbjct: 370 NLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSI 429
Query: 389 GYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPES 448
G+ + + + LC F+ + ++ + G+ ++S +CK K ++
Sbjct: 430 GFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKA 489
Query: 449 FEL 451
EL
Sbjct: 490 LEL 492
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 86/168 (51%), Gaps = 1/168 (0%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P+ YN LIRA C G A EL ++M+ +G+ P+ AT+ +LI + SR+ EA L
Sbjct: 643 PNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLL 702
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
EEM E LE V YT LI G K+G++ + EM K + + Y +I
Sbjct: 703 FEEMRME-GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYA 761
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILD 315
+ G EA R+L EMRE G +S+T I Y ++ EA++ D
Sbjct: 762 RDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSD 809
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 88/183 (48%), Gaps = 1/183 (0%)
Query: 275 ALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV-EGVKPDVIGYNVFLGW 333
AL V + G + TCN+++ R N F++ D V +GV PDV + +
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVSPDVYLFTTAINA 269
Query: 334 LCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPL 393
CK GK EA+ LF M G AP+VVT+ T+ DGL ++ EA + ++M+ +G P
Sbjct: 270 FCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPT 329
Query: 394 SKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLD 453
+ V L + VL ++T KG N +++ ++ + + ++ E+ D
Sbjct: 330 LITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKD 389
Query: 454 ALV 456
+V
Sbjct: 390 LMV 392
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 167/362 (46%), Gaps = 24/362 (6%)
Query: 107 IPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGH 165
+ F L +N L+ +L R+F L R G+ G P+ TY+ILI C RG
Sbjct: 358 VVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK 417
Query: 166 ADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYT 225
D A EM G++ + +LI+ C+ + A EM + KLE V YT
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINK-KLEPTVVTYT 476
Query: 226 NLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREG 285
+L+ G C G+++ A R+ EM KG+ + TL++ LF+AG +A+++ EM E
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536
Query: 286 GCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEA 343
+ N VT NVMI YC E + +A+ L + +G+ PD Y + LC G+ SEA
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Query: 344 MDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKG-------YAPL--- 393
+ + C + + Y L G CR + EA+ V EM+ +G Y L
Sbjct: 597 KVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDG 656
Query: 394 ------SKNLNAFVSELCQEG--NFELLSTVLSDLTSKGKICNE--GIWDVVLSMVCKPE 443
K + E+ G +++ T + D SK E GIWD++++ C P
Sbjct: 657 SLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPN 716
Query: 444 KV 445
+V
Sbjct: 717 EV 718
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/435 (24%), Positives = 194/435 (44%), Gaps = 29/435 (6%)
Query: 44 SLLSYDLIITKLGRAKMLPEMEQVLHQLH--LDTRH----------------RVPEPLLC 85
+L + ++ITK+ +LPE+ + LH + RH R +
Sbjct: 175 GVLVFKMMITKV---SLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYT 231
Query: 86 HVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQ---FDAVTELAARA 142
VI + SRA + + + C + +N L+ L C++ ++AV A
Sbjct: 232 GVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGL--CKKQKVWEAVGIKKDLA 289
Query: 143 GEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLR 202
G+ PD TY L+ C + E+ DEM P +A +L+ L + ++
Sbjct: 290 GKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIE 349
Query: 203 EAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTL 262
EA L + + +F + + +Y LI +CK + A + D M K GL+ + Y+ L
Sbjct: 350 EALNLVKRVV-DFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSIL 408
Query: 263 INALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGV 320
I+ + GK + AL L EM + G + + N +I +C+ + A + + + +
Sbjct: 409 IDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKL 468
Query: 321 KPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVV 380
+P V+ Y +G C +GK ++A+ L+H+M +G AP + T+ TL GL R R+AV
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 381 VLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVC 440
+ +EM P N + C+EG+ L ++T KG + + + ++ +C
Sbjct: 529 LFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC 588
Query: 441 KPEKVPESFELLDAL 455
+ E+ +D L
Sbjct: 589 LTGQASEAKVFVDGL 603
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 182/430 (42%), Gaps = 24/430 (5%)
Query: 15 LLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKML-PEMEQVLHQLHL 73
L+ + DP + + F N HR F HS S+ ++I L +A + P + L
Sbjct: 77 LIGTIDDPKLGLRFF---NFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLR 133
Query: 74 DTRHRVPEPLL--CH-------------VITFYARARQPSRAVQTF-LSIPSFRCQRTLK 117
+ +L C+ +I Y R+R+ V F + I ++
Sbjct: 134 ALKPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVR 193
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEM 176
+ + LLH L+ R F EL G PD Y +IR+ C RA E+ M
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
+ G + + LI LC+ ++ EA +K+++ + L+ V Y L+ G+CK+ E
Sbjct: 254 EATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGK-DLKPDVVTYCTLVYGLCKVQE 312
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
+ DEM+ A ++L+ L K GK EEAL +++ + + G N N
Sbjct: 313 FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372
Query: 297 MIGEYCRENNFEEAYRILD--GVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
+I C+ F EA + D G G++P+ + Y++ + C+ GK A+ +M G
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLS 414
V Y +L +G C++ A + EM+ K P + + C +G
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492
Query: 415 TVLSDLTSKG 424
+ ++T KG
Sbjct: 493 RLYHEMTGKG 502
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 173/404 (42%), Gaps = 39/404 (9%)
Query: 91 YARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PD 149
Y + ++A++ + + ++ +F TLL L +L E+ P+
Sbjct: 482 YCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPN 541
Query: 150 ACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKE 209
TYN++I C G +AFE EM +G+ PD ++ LIH LC + EA +
Sbjct: 542 RVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVD 601
Query: 210 EMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKA 269
+ + E YT L+ G C+ G+L A + EMV++G+ LD Y LI+ K
Sbjct: 602 GLHKG-NCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKH 660
Query: 270 GKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGY 327
++ +L+EM + G + + V MI + +F+EA+ I D + EG P+ + Y
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720
Query: 328 NVFLGWLCKEGKWSEA----------------------MDLF-------------HDMPR 352
+ LCK G +EA +D+ H+
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL 780
Query: 353 RGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFEL 412
+G + TY L G CR + EA ++ M+ G +P ++ELC+ + +
Sbjct: 781 KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKK 840
Query: 413 LSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ + +T KG + ++ ++ C ++ ++ EL + ++
Sbjct: 841 AIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML 884
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 131/298 (43%), Gaps = 24/298 (8%)
Query: 112 CQRTLKSFNTLLHALLTCRQ------FDAVTELAARAGEFGAPDACTYNILIRASCLRGH 165
C+ + LLH CR+ E+ R + D Y +LI S H
Sbjct: 608 CELNEICYTGLLHGF--CREGKLEEALSVCQEMVQRGVDL---DLVCYGVLIDGSL--KH 660
Query: 166 ADRA--FELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCV-- 221
DR F L EM RG++PD + ++I + +EAF + + M E GCV
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINE----GCVPN 716
Query: 222 -TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLE 280
YT +I G+CK G ++ A + +M + Y ++ L K + L
Sbjct: 717 EVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELH 776
Query: 281 EMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEG 338
G N+ T N++I +CR+ EEA ++ + +GV PD I Y + LC+
Sbjct: 777 NAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRN 836
Query: 339 KWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN 396
+A++L++ M +G PD V Y TL G C + +A + +EM+ +G P +K
Sbjct: 837 DVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 177/399 (44%), Gaps = 15/399 (3%)
Query: 66 QVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLS------IPSFRCQRTLKSF 119
+LH L + L +I Y +++ + ++ F +P C F
Sbjct: 79 SLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNC------F 132
Query: 120 NTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSR 179
N LL ++ F+ D ++ ILI+ C G +++F+L E+
Sbjct: 133 NYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEF 192
Query: 180 GVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSW 239
G P+ + TLI C+ + +A +L EM + L YT LI G+ K G
Sbjct: 193 GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGK-LGLVANERTYTVLINGLFKNGVKKQ 251
Query: 240 AFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIG 299
F + ++M + G+ + YN ++N L K G+ ++A +V +EMRE G N VT N +IG
Sbjct: 252 GFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIG 311
Query: 300 EYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAP 357
CRE EA +++D + +G+ P++I YN + C GK +A+ L D+ RG +P
Sbjct: 312 GLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 358 DVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVL 417
+VTY L G CR A ++ EM +G P + + N E +
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 418 SDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ G + + + V++ C ++ E+ L ++V
Sbjct: 432 LSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 175/366 (47%), Gaps = 4/366 (1%)
Query: 94 ARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACT 152
A + ++ + + F + + TL+ + + +L G+ G + T
Sbjct: 176 AGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERT 235
Query: 153 YNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMF 212
Y +LI G + FE++++M+ GV P+ T+ ++++LC++ R ++AF++ +EM
Sbjct: 236 YTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM- 294
Query: 213 REFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKK 272
RE + + Y LI G+C+ +L+ A ++ D+M G+ + YNTLI+ GK
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 273 EEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVF 330
+AL + +++ G + VT N+++ +CR+ + A +++ +E G+KP + Y +
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Query: 331 LGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGY 390
+ + +A+ L M G PDV TY L G C Q EA + M+ K
Sbjct: 415 IDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNC 474
Query: 391 APLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFE 450
P N + C+EG+ +L ++ K N + ++ ++CK K E+
Sbjct: 475 EPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAER 534
Query: 451 LLDALV 456
L++ ++
Sbjct: 535 LVEKMI 540
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 149/314 (47%), Gaps = 39/314 (12%)
Query: 117 KSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDE 175
+++ L++ L E+ + E G P+ TYN ++ C G AF++FDE
Sbjct: 234 RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDE 293
Query: 176 MRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIG 235
MR RGV + T+ TLI LC +L EA ++ ++M + + + Y LI G C +G
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM-KSDGINPNLITYNTLIDGFCGVG 352
Query: 236 ELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCN 295
+L A + ++ +GL YN L++ + G A ++++EM E G + + VT
Sbjct: 353 KLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYT 412
Query: 296 VMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR 353
++I + R +N E+A ++ +E G+ PDV Y+V + C +G+ +EA LF M +
Sbjct: 413 ILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472
Query: 354 GC-----------------------------------APDVVTYRTLFDGLCRWRQFREA 378
C AP+V +YR + + LC+ R+ +EA
Sbjct: 473 NCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEA 532
Query: 379 VVVLDEMMFKGYAP 392
++++M+ G P
Sbjct: 533 ERLVEKMIDSGIDP 546
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/271 (19%), Positives = 116/271 (42%), Gaps = 19/271 (7%)
Query: 187 TFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDE 246
T +L+H L E+ + F L Y +I + L+ + +E
Sbjct: 76 TSSSLLHYLTESETSKTKFRL----------------YEVIINSYVQSQSLNLSISYFNE 119
Query: 247 MVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENN 306
MV G + +N L+ + + + E + + + ++I C
Sbjct: 120 MVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSFGILIKGCCEAGE 178
Query: 307 FEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRT 364
E+++ +L + G P+V+ Y + CK+G+ +A DLF +M + G + TY
Sbjct: 179 IEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTV 238
Query: 365 LFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
L +GL + ++ + ++M G P N +++LC++G + V ++ +G
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 425 KICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
CN ++ ++ +C+ K+ E+ +++D +
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 83/182 (45%), Gaps = 18/182 (9%)
Query: 39 RPFRHSLLSYDLIITKL-------GRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHV-ITF 90
R SL++Y+++++ G AKM+ EME+ R P + + I
Sbjct: 367 RGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE---------RGIKPSKVTYTILIDT 417
Query: 91 YARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PD 149
+AR+ +A+Q LS+ + +++ L+H Q + + L E P+
Sbjct: 418 FARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPN 477
Query: 150 ACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKE 209
YN +I C G + RA +L EM + + P+ A++ +I LC+ + +EA L E
Sbjct: 478 EVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVE 537
Query: 210 EM 211
+M
Sbjct: 538 KM 539
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 145 bits (365), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 180/422 (42%), Gaps = 52/422 (12%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
VI + R +P A+ + + R + SFN L+ C + + + G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 147 -APDACTYNILIRASCLRGHADRAFELF---------------DEMRSRGVRPDQATFGT 190
PD T+N L+ CL A LF D+M G+ P TF T
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 191 LIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKK 250
LI+ LC R+ EA L +M + L V Y ++ G+CK+G+ A + +M +
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGK-GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290
Query: 251 GLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA 310
+K D +Y+ +I+ L K G +A + EM E G N T N MI +C + +A
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350
Query: 311 YRIL-DGVE-GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR--------------- 353
R+L D +E + PDV+ +N + KEGK EA L +M R
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYG 410
Query: 354 ----------------GCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNL 397
+PDVVT+ T+ D CR ++ E + +L E+ +G +
Sbjct: 411 FCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 470
Query: 398 NAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIW-DVVLSMVCKPEKVPESFELLDALV 456
N + C+ N + ++ S G +C + I +++L C+ EK+ E+ EL + +
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHG-VCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 457 LA 458
++
Sbjct: 530 MS 531
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 134/279 (48%), Gaps = 7/279 (2%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD T+N LI AS G A +L DEM R + PD T+ ++I+ C+++R +A
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA--- 420
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+ MF VT + +I C+ + ++ E+ ++GL + YNTLI+
Sbjct: 421 -KHMFDLMASPDVVT-FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFC 478
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDV--I 325
+ A + +EM G +++TCN+++ +C EEA + + ++ K D+ +
Sbjct: 479 EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV 538
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
YN+ + +CK K EA DLF +P G PDV TY + G C +A V+ +M
Sbjct: 539 AYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
G+ P + N + + G + ++S++ S G
Sbjct: 599 KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 128/266 (48%), Gaps = 8/266 (3%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD TYN +I C D A +FD M S PD TF T+I C R+ E +L
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQL 454
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
E+ R L T Y LI G C++ L+ A + EM+ G+ D N L+
Sbjct: 455 LREISRR-GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDG--VEGVKPDVI 325
+ K EEAL + E ++ + ++V N++I C+ + +EA+ + + GV+PDV
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
YNV + C + S+A LFH M G PD TY TL G + + +++ ++ EM
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFE 411
G++ + + V++L +G +
Sbjct: 634 RSNGFSGDAFTIK-MVADLITDGRLD 658
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 134/311 (43%), Gaps = 7/311 (2%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
AP+ TYN +I C G A L +M R + PD TF LI + +L EA +
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
L +EM VT Y ++I G CK A + D M D +NT+I+
Sbjct: 388 LCDEMLHRCIFPDTVT-YNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVY 442
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDV 324
+A + +E +++L E+ G N+ T N +I +C +N A + + GV PD
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 325 IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDE 384
I N+ L C+ K EA++LF + D V Y + G+C+ + EA +
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 562
Query: 385 MMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEK 444
+ G P + N +S C + + + + G + ++ ++ K +
Sbjct: 563 LPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE 622
Query: 445 VPESFELLDAL 455
+ +S EL+ +
Sbjct: 623 IDKSIELISEM 633
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 273 EEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA---YRILDGVEGVKPDVIGYNV 329
++A+ + M + +V CN +IG + R N + A YR ++ + + ++ +N+
Sbjct: 88 DDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKME-IRRIPLNIYSFNI 146
Query: 330 FLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQ--------------- 374
+ C K S ++ F + + G PDVVT+ TL GLC +
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 375 FREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDV 434
F EAV + D+M+ G P+ N ++ LC EG + +++ + KG + +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 435 VLSMVCKPEKVPESFELLDAL 455
+++ +CK + LL +
Sbjct: 267 IVNGMCKMGDTKSALNLLSKM 287
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 205/462 (44%), Gaps = 43/462 (9%)
Query: 16 LRSQKDPSVAFQLF--LNPNPQTNHR---------PFRHSLLSYDLIITKLGRAKMLPEM 64
L +P ++F++ L+ NP R RHS +Y+L+ L +A +
Sbjct: 63 LSKNLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLA 122
Query: 65 EQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLH 124
Q+ + D LL +++ +A + A T L + SF + N+LL+
Sbjct: 123 GQMFECMKSDGVSP-NNRLLGFLVSSFAEKGKLHFA--TALLLQSFEVEGCCMVVNSLLN 179
Query: 125 ALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRP 183
L+ + + +L F + D T+NILIR C G A++A EL M G P
Sbjct: 180 TLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEP 239
Query: 184 DQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC----VTIYTNLIKGVCKIGELSW 239
D T+ TLI C+++ L +A EMF++ K V YT++I G CK G++
Sbjct: 240 DIVTYNTLIQGFCKSNELNKA----SEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 240 AFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIG 299
A + D+M++ G+ +N L++ KAG+ A + +M GC + VT +I
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 300 EYCRENNFEEAYRILD--GVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAP 357
YCR + +R+ + G+ P+ Y++ + LC E + +A +L + + P
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP 415
Query: 358 DVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGN-FELLSTV 416
Y + DG C+ + EA V+++EM K P + C +G FE +S
Sbjct: 416 QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS-- 473
Query: 417 LSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALVLA 458
I+ ++++ C P+K+ S LL L+ A
Sbjct: 474 --------------IFHKMVAIGCSPDKITVS-SLLSCLLKA 500
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 148/303 (48%), Gaps = 5/303 (1%)
Query: 110 FRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADR 168
F+ K+FN L+ L + + EL FG PD TYN LI+ C ++
Sbjct: 200 FQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNK 259
Query: 169 AFELFDEMRSRGV-RPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNL 227
A E+F +++S V PD T+ ++I C+ ++REA L ++M R VT + L
Sbjct: 260 ASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVT-FNVL 318
Query: 228 IKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGC 287
+ G K GE+ A I+ +M+ G D + +LI+ + G+ + R+ EEM G
Sbjct: 319 VDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGM 378
Query: 288 EWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMD 345
N+ T +++I C EN +A +L + + + P YN + CK GK +EA
Sbjct: 379 FPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANV 438
Query: 346 LFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELC 405
+ +M ++ C PD +T+ L G C + EAV + +M+ G +P +++ +S L
Sbjct: 439 IVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLL 498
Query: 406 QEG 408
+ G
Sbjct: 499 KAG 501
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 139/290 (47%), Gaps = 11/290 (3%)
Query: 96 QPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTEL--AARAGEFGAPDACTY 153
+ +A++ + F C+ + ++NTL+ + + +E+ ++G +PD TY
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 154 NILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFR 213
+I C G A L D+M G+ P TF L+ + + A E++ +M
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 214 EFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAG 270
GC V +T+LI G C++G++S FR+ +EM +G+ +A Y+ LINAL
Sbjct: 341 F----GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 271 KKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VKPDVIGYN 328
+ +A +L ++ N +I +C+ EA I++ +E KPD I +
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 329 VFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREA 378
+ + C +G+ EA+ +FH M GC+PD +T +L L + +EA
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 120/270 (44%), Gaps = 2/270 (0%)
Query: 45 LLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTF 104
+++Y+ +I ++ L + ++ + + +I+ Y +A + A
Sbjct: 241 IVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLL 300
Query: 105 LSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLR 163
+ T +FN L+ + E+ + FG PD T+ LI C
Sbjct: 301 DDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRV 360
Query: 164 GHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTI 223
G + F L++EM +RG+ P+ T+ LI+ LC +RL +A EL ++ + + +
Sbjct: 361 GQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPF-M 419
Query: 224 YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMR 283
Y +I G CK G+++ A I +EM KK K D + LI G+ EA+ + +M
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 479
Query: 284 EGGCEWNSVTCNVMIGEYCRENNFEEAYRI 313
GC + +T + ++ + +EAY +
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 8/199 (4%)
Query: 91 YARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQ----FDAVTELAARAGEFG 146
YA+A + A + + SF C + +F +L+ Q F E+ AR G F
Sbjct: 322 YAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR-GMF- 379
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
P+A TY+ILI A C +A EL ++ S+ + P + +I C+ ++ EA
Sbjct: 380 -PNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANV 438
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
+ EEM ++ K + +T LI G C G + A I +MV G D ++L++ L
Sbjct: 439 IVEEMEKK-KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCL 497
Query: 267 FKAGKKEEALRVLEEMREG 285
KAG +EA + + R+G
Sbjct: 498 LKAGMAKEAYHLNQIARKG 516
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 120/462 (25%), Positives = 205/462 (44%), Gaps = 43/462 (9%)
Query: 16 LRSQKDPSVAFQLF--LNPNPQTNHR---------PFRHSLLSYDLIITKLGRAKMLPEM 64
L +P ++F++ L+ NP R RHS +Y+L+ L +A +
Sbjct: 63 LSKNLNPFISFEVVKKLDNNPHIGFRFWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLA 122
Query: 65 EQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLH 124
Q+ + D LL +++ +A + A T L + SF + N+LL+
Sbjct: 123 GQMFECMKSDGVSP-NNRLLGFLVSSFAEKGKLHFA--TALLLQSFEVEGCCMVVNSLLN 179
Query: 125 ALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRP 183
L+ + + +L F + D T+NILIR C G A++A EL M G P
Sbjct: 180 TLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEP 239
Query: 184 DQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC----VTIYTNLIKGVCKIGELSW 239
D T+ TLI C+++ L +A EMF++ K V YT++I G CK G++
Sbjct: 240 DIVTYNTLIQGFCKSNELNKA----SEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMRE 295
Query: 240 AFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIG 299
A + D+M++ G+ +N L++ KAG+ A + +M GC + VT +I
Sbjct: 296 ASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLID 355
Query: 300 EYCRENNFEEAYRILD--GVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAP 357
YCR + +R+ + G+ P+ Y++ + LC E + +A +L + + P
Sbjct: 356 GYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIP 415
Query: 358 DVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGN-FELLSTV 416
Y + DG C+ + EA V+++EM K P + C +G FE +S
Sbjct: 416 QPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS-- 473
Query: 417 LSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALVLA 458
I+ ++++ C P+K+ S LL L+ A
Sbjct: 474 --------------IFHKMVAIGCSPDKITVS-SLLSCLLKA 500
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 148/303 (48%), Gaps = 5/303 (1%)
Query: 110 FRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADR 168
F+ K+FN L+ L + + EL FG PD TYN LI+ C ++
Sbjct: 200 FQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNK 259
Query: 169 AFELFDEMRSRGV-RPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNL 227
A E+F +++S V PD T+ ++I C+ ++REA L ++M R VT + L
Sbjct: 260 ASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVT-FNVL 318
Query: 228 IKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGC 287
+ G K GE+ A I+ +M+ G D + +LI+ + G+ + R+ EEM G
Sbjct: 319 VDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGM 378
Query: 288 EWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMD 345
N+ T +++I C EN +A +L + + + P YN + CK GK +EA
Sbjct: 379 FPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANV 438
Query: 346 LFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELC 405
+ +M ++ C PD +T+ L G C + EAV + +M+ G +P +++ +S L
Sbjct: 439 IVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLL 498
Query: 406 QEG 408
+ G
Sbjct: 499 KAG 501
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 139/290 (47%), Gaps = 11/290 (3%)
Query: 96 QPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTEL--AARAGEFGAPDACTY 153
+ +A++ + F C+ + ++NTL+ + + +E+ ++G +PD TY
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 154 NILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFR 213
+I C G A L D+M G+ P TF L+ + + A E++ +M
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 214 EFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAG 270
GC V +T+LI G C++G++S FR+ +EM +G+ +A Y+ LINAL
Sbjct: 341 F----GCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNEN 396
Query: 271 KKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VKPDVIGYN 328
+ +A +L ++ N +I +C+ EA I++ +E KPD I +
Sbjct: 397 RLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFT 456
Query: 329 VFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREA 378
+ + C +G+ EA+ +FH M GC+PD +T +L L + +EA
Sbjct: 457 ILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 120/270 (44%), Gaps = 2/270 (0%)
Query: 45 LLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTF 104
+++Y+ +I ++ L + ++ + + +I+ Y +A + A
Sbjct: 241 IVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLL 300
Query: 105 LSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLR 163
+ T +FN L+ + E+ + FG PD T+ LI C
Sbjct: 301 DDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRV 360
Query: 164 GHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTI 223
G + F L++EM +RG+ P+ T+ LI+ LC +RL +A EL ++ + + +
Sbjct: 361 GQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPF-M 419
Query: 224 YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMR 283
Y +I G CK G+++ A I +EM KK K D + LI G+ EA+ + +M
Sbjct: 420 YNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMV 479
Query: 284 EGGCEWNSVTCNVMIGEYCRENNFEEAYRI 313
GC + +T + ++ + +EAY +
Sbjct: 480 AIGCSPDKITVSSLLSCLLKAGMAKEAYHL 509
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 8/199 (4%)
Query: 91 YARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQ----FDAVTELAARAGEFG 146
YA+A + A + + SF C + +F +L+ Q F E+ AR G F
Sbjct: 322 YAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNAR-GMF- 379
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
P+A TY+ILI A C +A EL ++ S+ + P + +I C+ ++ EA
Sbjct: 380 -PNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANV 438
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
+ EEM ++ K + +T LI G C G + A I +MV G D ++L++ L
Sbjct: 439 IVEEMEKK-KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCL 497
Query: 267 FKAGKKEEALRVLEEMREG 285
KAG +EA + + R+G
Sbjct: 498 LKAGMAKEAYHLNQIARKG 516
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/339 (28%), Positives = 156/339 (46%), Gaps = 4/339 (1%)
Query: 115 TLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELF 173
++ F+ +L + + +D V L G D +YNI+I C A +
Sbjct: 68 SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 127
Query: 174 DEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCK 233
+M G PD T +LI+ C+ +R+ +A +L +M E V IY +I G CK
Sbjct: 128 GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKM-EEMGFRPDVVIYNTIIDGSCK 186
Query: 234 IGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
IG ++ A + D M + G++ DA YN+L+ L +G+ +A R++ +M N +T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 294 CNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
+I + +E F EA ++ + + V PDV YN + LC G+ EA + M
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
+GC PDVVTY TL +G C+ ++ E + EM +G + N + Q G +
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 412 LLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFE 450
+ S + S+ I I L M + EK FE
Sbjct: 367 AAQEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFE 405
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 166/372 (44%), Gaps = 7/372 (1%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
V++ A+++ + F + L S+N +++ L C +F + + +FG
Sbjct: 75 VLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFG 134
Query: 147 -APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
PD T + LI C A +L +M G RPD + T+I C+ + +A
Sbjct: 135 YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 194
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
EL + M R+ VT Y +L+ G+C G S A R+ +MV + + + + +I+
Sbjct: 195 ELFDRMERDGVRADAVT-YNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILD--GVEGVKPD 323
K GK EA+++ EEM + + T N +I C +EA ++LD +G PD
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 313
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
V+ YN + CK + E LF +M +RG D +TY T+ G + + A +
Sbjct: 314 VVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFS 373
Query: 384 EMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPE 443
M + P + + + LC E + ++ + +++V+ +CK
Sbjct: 374 RMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIG 430
Query: 444 KVPESFELLDAL 455
V ++++L +L
Sbjct: 431 NVEDAWDLFRSL 442
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 145/334 (43%), Gaps = 72/334 (21%)
Query: 130 RQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATF 188
R FDA+ +L ++ E G PD YN +I SC G + A ELFD M GVR D T+
Sbjct: 154 RVFDAI-DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTY 212
Query: 189 GTLIHRLC-----------------------------------ENSRLREAFELKEEMFR 213
+L+ LC + + EA +L EEM R
Sbjct: 213 NSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTR 272
Query: 214 EFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKE 273
++ V Y +LI G+C G + A ++ D MV KG D YNTLIN K+ + +
Sbjct: 273 RC-VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Query: 274 EALRVLEEMREGGCEWNSVTCNVMIGEY-------------------------------- 301
E ++ EM + G +++T N +I Y
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGL 391
Query: 302 CRENNFEEAYRILDGVEG--VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDV 359
C E+A + + ++ ++ D+ YN+ + +CK G +A DLF + +G PDV
Sbjct: 392 CMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDV 451
Query: 360 VTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPL 393
V+Y T+ G CR RQ+ ++ ++ +M G PL
Sbjct: 452 VSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLPL 485
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 92/199 (46%), Gaps = 2/199 (1%)
Query: 259 YNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE 318
++ +++ + K+ + + + M G + + N++I CR + F A ++ +
Sbjct: 72 FSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMM 131
Query: 319 --GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFR 376
G +PDV+ + + C+ + +A+DL M G PDVV Y T+ DG C+
Sbjct: 132 KFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVN 191
Query: 377 EAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVL 436
+AV + D M G + N+ V+ LC G + + ++ D+ + + N + V+
Sbjct: 192 DAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVI 251
Query: 437 SMVCKPEKVPESFELLDAL 455
+ K K E+ +L + +
Sbjct: 252 DVFVKEGKFSEAMKLYEEM 270
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 170/352 (48%), Gaps = 19/352 (5%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHAL-LTCRQFDAVTELAARAGEF 145
+I+ Y R+ A+ F S+ + + L ++N ++ A +F V +
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN 333
Query: 146 GA-PDACTYNILIRASCLRGHA-DRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLRE 203
G PD T+N L+ A C RG + A LFDEM +R + D ++ TL+ +C+ ++
Sbjct: 334 GVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDL 392
Query: 204 AFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLI 263
AFE+ +M + + V+ Y+ +I G K G A + EM G+ LD YNTL+
Sbjct: 393 AFEILAQMPVKRIMPNVVS-YSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL 451
Query: 264 NALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVK 321
+ K G+ EEAL +L EM G + + VT N ++G Y ++ ++E ++ + E V
Sbjct: 452 SIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVL 511
Query: 322 PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVV 381
P+++ Y+ + K G + EAM++F + G DVV Y L D LC+ AV +
Sbjct: 512 PNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSL 571
Query: 382 LDEMMFKGYAPLSKNLNAFV------------SELCQEGNFELLSTVLSDLT 421
+DEM +G +P N+ + ++ G+ S+ LS LT
Sbjct: 572 IDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALT 623
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 149/346 (43%), Gaps = 40/346 (11%)
Query: 115 TLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHAD--RAFE 171
T+ +F+ L+ A + + E+G P+ TYN +I A C +G + + +
Sbjct: 267 TVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDA-CGKGGMEFKQVAK 325
Query: 172 LFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF-ELKEEMFREFKLEGCVTIYTNLIKG 230
FDEM+ GV+PD+ TF +L+ +C L EA L +EM ++E V Y L+
Sbjct: 326 FFDEMQRNGVQPDRITFNSLL-AVCSRGGLWEAARNLFDEMTNR-RIEQDVFSYNTLLDA 383
Query: 231 VCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWN 290
+CK G++ AF I +M K + + Y+T+I+ KAG+ +EAL + EMR
Sbjct: 384 ICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMR------- 436
Query: 291 SVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM 350
G+ D + YN L K G+ EA+D+ +M
Sbjct: 437 --------------------------YLGIALDRVSYNTLLSIYTKVGRSEEALDILREM 470
Query: 351 PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNF 410
G DVVTY L G + ++ E V EM + P + + + G +
Sbjct: 471 ASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLY 530
Query: 411 ELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ + + S G + ++ ++ +CK V + L+D +
Sbjct: 531 KEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMT 576
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 137/319 (42%), Gaps = 29/319 (9%)
Query: 93 RARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDAC 151
+ Q A + +P R + S++T++ +FD L G A D
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 152 TYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM 211
+YN L+ G ++ A ++ EM S G++ D T+ L+ + + E ++ EM
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEM 505
Query: 212 FREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGK 271
RE L +T Y+ LI G K G A I E GL+ D LY+ LI+AL K G
Sbjct: 506 KREHVLPNLLT-YSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGL 564
Query: 272 KEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKP--------- 322
A+ +++EM + G N VT N +I + R + + +G G P
Sbjct: 565 VGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNG--GSLPFSSSALSAL 622
Query: 323 -DVIGYNV--FLGWL-----------CKEG--KWSEAMDLFHDMPRRGCAPDVVTYRTLF 366
+ G V G L C+EG + S +++F M + P+VVT+ +
Sbjct: 623 TETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAIL 682
Query: 367 DGLCRWRQFREAVVVLDEM 385
+ R F +A ++L+E+
Sbjct: 683 NACSRCNSFEDASMLLEEL 701
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 5/230 (2%)
Query: 227 LIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGG 286
+I + + G+++ A RI + G ++ LI+A ++G EEA+ V M+E G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 287 CEWNSVTCNVMIGEYCRENN--FEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSE 342
N VT N +I + C + F++ + D ++ GV+PD I +N L + G W
Sbjct: 299 LRPNLVTYNAVI-DACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 343 AMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVS 402
A +LF +M R DV +Y TL D +C+ Q A +L +M K P + + +
Sbjct: 358 ARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVID 417
Query: 403 ELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+ G F+ + ++ G + ++ +LS+ K + E+ ++L
Sbjct: 418 GFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDIL 467
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 132/306 (43%), Gaps = 8/306 (2%)
Query: 147 APDACTYNILIRASCLRGHADRA--FELFDEMRSRGVRPDQATFGTLIHRLCENSRLREA 204
D CTY +IR R D+A F F R R +I L ++ A
Sbjct: 195 GSDDCTY--IIRELGNRNECDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIA 252
Query: 205 FELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLIN 264
+ E F V ++ LI + G A + + M + GL+ + YN +I+
Sbjct: 253 KRIFETAFAG-GYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 265 ALFKAGKK-EEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VK 321
A K G + ++ + +EM+ G + + +T N ++ R +E A + D + ++
Sbjct: 312 ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIE 371
Query: 322 PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVV 381
DV YN L +CK G+ A ++ MP + P+VV+Y T+ DG + +F EA+ +
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNL 431
Query: 382 LDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCK 441
EM + G A + N +S + G E +L ++ S G + ++ +L K
Sbjct: 432 FGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGK 491
Query: 442 PEKVPE 447
K E
Sbjct: 492 QGKYDE 497
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/422 (26%), Positives = 180/422 (42%), Gaps = 52/422 (12%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
VI + R +P A+ + + R + SFN L+ C + + + G
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 147 -APDACTYNILIRASCLRGHADRAFELF---------------DEMRSRGVRPDQATFGT 190
PD T+N L+ CL A LF D+M G+ P TF T
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 191 LIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKK 250
LI+ LC R+ EA L +M + L V Y ++ G+CK+G+ A + +M +
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGK-GLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET 290
Query: 251 GLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA 310
+K D +Y+ +I+ L K G +A + EM E G N T N MI +C + +A
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350
Query: 311 YRIL-DGVE-GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR--------------- 353
R+L D +E + PDV+ +N + KEGK EA L +M R
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYG 410
Query: 354 ----------------GCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNL 397
+PDVVT+ T+ D CR ++ E + +L E+ +G +
Sbjct: 411 FCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTY 470
Query: 398 NAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIW-DVVLSMVCKPEKVPESFELLDALV 456
N + C+ N + ++ S G +C + I +++L C+ EK+ E+ EL + +
Sbjct: 471 NTLIHGFCEVDNLNAAQDLFQEMISHG-VCPDTITCNILLYGFCENEKLEEALELFEVIQ 529
Query: 457 LA 458
++
Sbjct: 530 MS 531
Score = 132 bits (332), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 134/279 (48%), Gaps = 7/279 (2%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD T+N LI AS G A +L DEM R + PD T+ ++I+ C+++R +A
Sbjct: 364 PDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA--- 420
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+ MF VT + +I C+ + ++ E+ ++GL + YNTLI+
Sbjct: 421 -KHMFDLMASPDVVT-FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFC 478
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDV--I 325
+ A + +EM G +++TCN+++ +C EEA + + ++ K D+ +
Sbjct: 479 EVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTV 538
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
YN+ + +CK K EA DLF +P G PDV TY + G C +A V+ +M
Sbjct: 539 AYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
G+ P + N + + G + ++S++ S G
Sbjct: 599 KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637
Score = 125 bits (314), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 129/272 (47%), Gaps = 7/272 (2%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD TYN +I C D A +FD M S PD TF T+I C R+ E +L
Sbjct: 399 PDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGMQL 454
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
E+ R L T Y LI G C++ L+ A + EM+ G+ D N L+
Sbjct: 455 LREISRR-GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFC 513
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDG--VEGVKPDVI 325
+ K EEAL + E ++ + ++V N++I C+ + +EA+ + + GV+PDV
Sbjct: 514 ENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQ 573
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
YNV + C + S+A LFH M G PD TY TL G + + +++ ++ EM
Sbjct: 574 TYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEM 633
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFELLSTVL 417
G++ + + +C+ + E++ L
Sbjct: 634 RSNGFSGDAFTIKMAEEIICRVSDEEIIENYL 665
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 134/311 (43%), Gaps = 7/311 (2%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
AP+ TYN +I C G A L +M R + PD TF LI + +L EA +
Sbjct: 328 APNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEK 387
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
L +EM VT Y ++I G CK A + D M D +NT+I+
Sbjct: 388 LCDEMLHRCIFPDTVT-YNSMIYGFCKHNRFDDAKHMFDLMASP----DVVTFNTIIDVY 442
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDV 324
+A + +E +++L E+ G N+ T N +I +C +N A + + GV PD
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 325 IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDE 384
I N+ L C+ K EA++LF + D V Y + G+C+ + EA +
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 562
Query: 385 MMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEK 444
+ G P + N +S C + + + + G + ++ ++ K +
Sbjct: 563 LPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGE 622
Query: 445 VPESFELLDAL 455
+ +S EL+ +
Sbjct: 623 IDKSIELISEM 633
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 289 WNSVTCNVMIGEYCRENNFEEA---YRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMD 345
+ +V CN +IG + R N + A YR ++ + + ++ +N+ + C K S ++
Sbjct: 104 YTAVDCNKVIGVFVRMNRPDVAISLYRKME-IRRIPLNIYSFNILIKCFCDCHKLSFSLS 162
Query: 346 LFHDMPRRGCAPDVVTYRTLFDGLCRWRQ---------------FREAVVVLDEMMFKGY 390
F + + G PDVVT+ TL GLC + F EAV + D+M+ G
Sbjct: 163 TFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGL 222
Query: 391 APLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFE 450
P+ N ++ LC EG + +++ + KG + + +++ +CK +
Sbjct: 223 TPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALN 282
Query: 451 LLDAL 455
LL +
Sbjct: 283 LLSKM 287
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 170/328 (51%), Gaps = 7/328 (2%)
Query: 133 DAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLI 192
D+ + L + P+ L+ C +A + + M S G+ PD + + L+
Sbjct: 89 DSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLV 148
Query: 193 HRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGL 252
++LC+ + A +L E+M VT Y L++G+C +G L+ + + + +++KGL
Sbjct: 149 NQLCKRGNVGYAMQLVEKMEDHGYPSNTVT-YNALVRGLCMLGSLNQSLQFVERLMQKGL 207
Query: 253 KLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYR 312
+A Y+ L+ A +K +EA+++L+E+ G E N V+ NV++ +C+E ++A
Sbjct: 208 APNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMA 267
Query: 313 ILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLC 370
+ + +G K +V+ YN+ L LC +G+W EA L +M AP VVTY L + L
Sbjct: 268 LFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLA 327
Query: 371 RWRQFREAVVVLDEMMFKG---YAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKIC 427
+ +A+ VL EM KG + + + N ++ LC+EG +L+ L ++ +
Sbjct: 328 FHGRTEQALQVLKEMS-KGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKP 386
Query: 428 NEGIWDVVLSMVCKPEKVPESFELLDAL 455
NEG ++ + S+ KV E+F ++ +L
Sbjct: 387 NEGTYNAIGSLCEHNSKVQEAFYIIQSL 414
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 148/293 (50%), Gaps = 7/293 (2%)
Query: 169 AFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLI 228
+F + + + G +P+ A L++ LC+ +RL++A + E M + + YT L+
Sbjct: 90 SFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPD-ASAYTYLV 148
Query: 229 KGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCE 288
+CK G + +A ++ ++M G + YN L+ L G ++L+ +E + + G
Sbjct: 149 NQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLA 208
Query: 289 WNSVTCNVMIGEYCRENNFEEAYRILDG--VEGVKPDVIGYNVFLGWLCKEGKWSEAMDL 346
N+ T + ++ +E +EA ++LD V+G +P+++ YNV L CKEG+ +AM L
Sbjct: 209 PNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMAL 268
Query: 347 FHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQ 406
F ++P +G +VV+Y L LC ++ EA +L EM AP N ++ L
Sbjct: 269 FRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAF 328
Query: 407 EGNFELLSTVLSDLTSKGKI---CNEGIWDVVLSMVCKPEKVPESFELLDALV 456
G E VL ++ SKG ++ V++ +CK KV + LD ++
Sbjct: 329 HGRTEQALQVLKEM-SKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMI 380
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 150/327 (45%), Gaps = 11/327 (3%)
Query: 137 ELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLC 196
E+ + GE P+ +YN+L+ C G D A LF E+ ++G + + ++ L+ LC
Sbjct: 236 EIIVKGGE---PNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLC 292
Query: 197 ENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKG--LKL 254
+ R EA L EM + VT Y LI + G A ++ EM K ++
Sbjct: 293 CDGRWEEANSLLAEMDGGDRAPSVVT-YNILINSLAFHGRTEQALQVLKEMSKGNHQFRV 351
Query: 255 DAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENN-FEEAYRI 313
A YN +I L K GK + ++ L+EM C+ N T N IG C N+ +EA+ I
Sbjct: 352 TATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYI 410
Query: 314 LDGVEGVKPDVIG--YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCR 371
+ + + Y + LC++G A L ++M R G PD TY L GLC
Sbjct: 411 IQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCL 470
Query: 372 WRQFREAVVVLDEM-MFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEG 430
F A+ VL M + P N NA + LC+ +L V + K ++ NE
Sbjct: 471 EGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNET 530
Query: 431 IWDVVLSMVCKPEKVPESFELLDALVL 457
+ +++ + +++ + E+LD L L
Sbjct: 531 TYAILVEGIAHEDELELAKEVLDELRL 557
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 141/311 (45%), Gaps = 13/311 (4%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALL-TCRQFDAVTELAARAGEF 145
++T + + + A+ F +P+ + + S+N LL L R +A + LA G
Sbjct: 252 LLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGD 311
Query: 146 GAPDACTYNILIRASCLRGHADRAFELFDEMRSRG---VRPDQATFGTLIHRLCENSRLR 202
AP TYNILI + G ++A ++ EM S+G R ++ +I RLC+ ++
Sbjct: 312 RAPSVVTYNILINSLAFHGRTEQALQVLKEM-SKGNHQFRVTATSYNPVIARLCKEGKVD 370
Query: 203 EAFELKEEM-FREFKL-EGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYN 260
+ +EM +R K EG +L + K+ E AF I + K Y
Sbjct: 371 LVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQE---AFYIIQSLSNKQKCCTHDFYK 427
Query: 261 TLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFE---EAYRILDGV 317
++I +L + G A ++L EM G + ++ T + +I C E F E I++
Sbjct: 428 SVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEES 487
Query: 318 EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFRE 377
E KP V +N + LCK + AM++F M + P+ TY L +G+ +
Sbjct: 488 ENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELEL 547
Query: 378 AVVVLDEMMFK 388
A VLDE+ +
Sbjct: 548 AKEVLDELRLR 558
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 108/218 (49%), Gaps = 2/218 (0%)
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
LS +F + +V G K + A L+ L KA + ++A+RV+E M G ++
Sbjct: 87 LSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTY 146
Query: 297 MIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
++ + C+ N A ++++ +E G + + YN + LC G ++++ + ++G
Sbjct: 147 LVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKG 206
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLS 414
AP+ TY L + + R EAV +LDE++ KG P + N ++ C+EG +
Sbjct: 207 LAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAM 266
Query: 415 TVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+ +L +KG N ++++L +C + E+ LL
Sbjct: 267 ALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLL 304
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 2/156 (1%)
Query: 304 ENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVT 361
E N +++ L+ + G KP+V L LCK + +A+ + M G PD
Sbjct: 84 EPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASA 143
Query: 362 YRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLT 421
Y L + LC+ A+ ++++M GY + NA V LC G+ + L
Sbjct: 144 YTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLM 203
Query: 422 SKGKICNEGIWDVVLSMVCKPEKVPESFELLDALVL 457
KG N + +L K E+ +LLD +++
Sbjct: 204 QKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIV 239
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/356 (26%), Positives = 162/356 (45%), Gaps = 4/356 (1%)
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIR 158
A+ F + R ++ FN LL A+ ++FD V L + G + + TYNILI
Sbjct: 69 AIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILIN 128
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
C R A L +M G P T +L++ C R+ +A L ++M E
Sbjct: 129 CFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV-EMGYR 187
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
+T LI G+ + S A + D MV++G + + Y ++N L K G + A +
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
Query: 279 LEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCK 336
L +M E N V + +I C+ + ++A + +E GV+P+VI Y+ + LC
Sbjct: 248 LNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCN 307
Query: 337 EGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN 396
+WS+A L DM R P+VVT+ L D + + EA + DEM+ + P
Sbjct: 308 YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367
Query: 397 LNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
++ ++ C + + + SK N ++ +++ CK +++ E EL
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 169/372 (45%), Gaps = 4/372 (1%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
+I + R Q S A+ + + ++ + ++LL+ ++ L + E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 147 A-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
PD T+ LI L A A L D M RG +P+ T+G +++ LC+ + AF
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
L +M K+E V IY+ +I +CK A + EM KG++ + Y++LI+
Sbjct: 246 NLLNKM-EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 304
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPD 323
L + +A R+L +M E N VT N +I + +E EA ++ D + + PD
Sbjct: 305 LCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 364
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
+ Y+ + C + EA +F M + C P+VVTY TL +G C+ ++ E V +
Sbjct: 365 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFR 424
Query: 384 EMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPE 443
EM +G + + Q + + V + S G N ++ +L +CK
Sbjct: 425 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNG 484
Query: 444 KVPESFELLDAL 455
K+ ++ + + L
Sbjct: 485 KLEKAMVVFEYL 496
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 199/486 (40%), Gaps = 54/486 (11%)
Query: 1 MATPKPI-SPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAK 59
M +P+ S F + LL S F L ++ + H+L +Y+++I R
Sbjct: 76 MVKSRPLPSIFEFNKLL-SAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 134
Query: 60 MLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSF 119
+ +L ++ + + L ++ Y ++ S AV + + +F
Sbjct: 135 QISLALALLGKM-MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITF 193
Query: 120 NTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRG-------------- 164
TL+H L + L R + G P+ TY +++ C RG
Sbjct: 194 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 253
Query: 165 ---------------------HADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLRE 203
H D A LF EM ++GVRP+ T+ +LI LC R +
Sbjct: 254 AKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSD 313
Query: 204 AFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLI 263
A L +M E K+ V + LI K G+L A ++ DEM+K+ + D Y++LI
Sbjct: 314 ASRLLSDMI-ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Query: 264 NALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE----- 318
N + +EA + E M C N VT N +I +C+ A RI +GVE
Sbjct: 373 NGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK------AKRIDEGVELFREM 426
Query: 319 ---GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQF 375
G+ + + Y + + A +F M G P+++TY TL DGLC+ +
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKL 486
Query: 376 REAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVV 435
+A+VV + + P N + +C+ G E + L+ KG + I++ +
Sbjct: 487 EKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTM 546
Query: 436 LSMVCK 441
+S C+
Sbjct: 547 ISGFCR 552
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 142/335 (42%), Gaps = 34/335 (10%)
Query: 122 LLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGV 181
L + L + + DA+ P +N L+ A D L ++M+ G+
Sbjct: 57 LRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI 116
Query: 182 RPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAF 241
+ T+ LI+ C S++ A L +M + E + ++L+ G C +S A
Sbjct: 117 SHNLYTYNILINCFCRRSQISLALALLGKMMK-LGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 242 RIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEY 301
+ D+MV+ G + D + TLI+ LF K EA+ +++ M + GC+
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQ------------- 222
Query: 302 CRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVT 361
P+++ Y V + LCK G A +L + M +VV
Sbjct: 223 --------------------PNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262
Query: 362 YRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLT 421
Y T+ D LC++R +A+ + EM KG P ++ +S LC + S +LSD+
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322
Query: 422 SKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ N ++ ++ K K+ E+ +L D ++
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 142 bits (358), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/354 (27%), Positives = 161/354 (45%), Gaps = 9/354 (2%)
Query: 105 LSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLR 163
L IP C + N LL+ C Q + + G P T+ L+ C
Sbjct: 110 LGIPHNLC-----TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164
Query: 164 GHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTI 223
A +FD+M G +P+ + T+I LC++ ++ A +L M ++ VT
Sbjct: 165 DRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVT- 223
Query: 224 YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMR 283
Y +LI G+C G S A R+ M K+ + D +N LI+A K G+ EA EEM
Sbjct: 224 YNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMI 283
Query: 284 EGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWS 341
+ + VT +++I C + +EA + + +G PDV+ Y++ + CK K
Sbjct: 284 RRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVE 343
Query: 342 EAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFV 401
M LF +M +RG + VTY L G CR + A + M+F G P N +
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLL 403
Query: 402 SELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
LC G E +L+D+ G + +++++ +CK +V +++++ +L
Sbjct: 404 HGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457
Score = 142 bits (357), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 111/394 (28%), Positives = 171/394 (43%), Gaps = 11/394 (2%)
Query: 4 PKP-ISPF-RLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKML 61
P P I+ F RL S + K V L+ Q H+L + ++++ R L
Sbjct: 77 PLPSIADFSRLLSAISKMKKYDVVIYLW----EQMQMLGIPHNLCTCNILLNCFCRCSQL 132
Query: 62 PEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNT 121
L ++ + H ++ + R + A+ F + + + +NT
Sbjct: 133 SLALSFLGKM-IKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNT 191
Query: 122 LLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRSRG 180
++ L +Q D +L R + G PD TYN LI C G A + M R
Sbjct: 192 IIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKRE 251
Query: 181 VRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWA 240
+ PD TF LI + R+ EA E EEM R L+ + Y+ LI G+C L A
Sbjct: 252 IYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRR-SLDPDIVTYSLLIYGLCMYSRLDEA 310
Query: 241 FRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGE 300
+ MV KG D Y+ LIN K+ K E +++ EM + G N+VT ++I
Sbjct: 311 EEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQG 370
Query: 301 YCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPD 358
YCR A I + GV P++I YNV L LC GK +A+ + DM + G D
Sbjct: 371 YCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDAD 430
Query: 359 VVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
+VTY + G+C+ + +A + + +G P
Sbjct: 431 IVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMP 464
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 137/281 (48%), Gaps = 10/281 (3%)
Query: 118 SFNTLLHALLTC-RQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEM 176
++N+L+ L + R DA ++ PD T+N LI A G A E ++EM
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC---VTIYTNLIKGVCK 233
R + PD T+ LI+ LC SRL EA EEMF +GC V Y+ LI G CK
Sbjct: 283 IRRSLDPDIVTYSLLIYGLCMYSRLDEA----EEMFGFMVSKGCFPDVVTYSILINGYCK 338
Query: 234 IGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
++ ++ EM ++G+ + Y LI +AGK A + M G N +T
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIIT 398
Query: 294 CNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
NV++ C E+A IL ++ G+ D++ YN+ + +CK G+ ++A D++ +
Sbjct: 399 YNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLN 458
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
+G PD+ TY T+ GL + REA + +M G P
Sbjct: 459 CQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILP 499
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 155/361 (42%), Gaps = 39/361 (10%)
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAP-DACTYNILIR 158
++ F + R ++ F+ LL A+ +++D V L + G P + CT NIL+
Sbjct: 65 SLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLN 124
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
C A +M G P TFG+L++ C R+ +
Sbjct: 125 CFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYD--------------- 169
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
A + D+MV G K + +YNT+I+ L K+ + + AL +
Sbjct: 170 ---------------------ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDL 208
Query: 279 LEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VKPDVIGYNVFLGWLCK 336
L M + G + VT N +I C + +A R++ + + PDV +N + K
Sbjct: 209 LNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVK 268
Query: 337 EGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN 396
EG+ SEA + + +M RR PD+VTY L GLC + + EA + M+ KG P
Sbjct: 269 EGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVT 328
Query: 397 LNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ ++ C+ E + +++ +G + N + +++ C+ K+ + E+ +V
Sbjct: 329 YSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV 388
Query: 457 L 457
Sbjct: 389 F 389
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 112/213 (52%), Gaps = 3/213 (1%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD TY++LI C+ D A E+F M S+G PD T+ LI+ C++ ++ +L
Sbjct: 289 PDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKL 348
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
EM + + VT YT LI+G C+ G+L+ A I MV G+ + YN L++ L
Sbjct: 349 FCEMSQRGVVRNTVT-YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLC 407
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVI 325
GK E+AL +L +M++ G + + VT N++I C+ +A+ I + +G+ PD+
Sbjct: 408 DNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIW 467
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPD 358
Y + L K+G EA LF M G P+
Sbjct: 468 TYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 187/421 (44%), Gaps = 26/421 (6%)
Query: 7 ISPFRLSS-LLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEME 65
+ FR+ + LL+ QKD ++ + F N P HSL ++ +++ L + + E
Sbjct: 79 LDSFRVKNVLLKIQKDYLLSLEFF---NWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAE 135
Query: 66 QVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHA 125
+L + ++ +P + ++ Y C T + F++L
Sbjct: 136 SILRDVLVNGGVDLPAKVFDALLYSYRE------------------CDSTPRVFDSLFKT 177
Query: 126 LLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPD 184
++F T+ + ++G P + N + + +G D A + EMR + P+
Sbjct: 178 FAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPN 237
Query: 185 QATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIK 244
T ++ C + +L + EL ++M R Y LI G C+ G LS A ++K
Sbjct: 238 PYTLNMVMSGYCRSGKLDKGIELLQDMER-LGFRATDVSYNTLIAGHCEKGLLSSALKLK 296
Query: 245 DEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRE 304
+ M K GL+ + +NTLI+ +A K +EA +V EM+ N+VT N +I Y ++
Sbjct: 297 NMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQ 356
Query: 305 NNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTY 362
+ E A+R + + G++ D++ YN + LCK+ K +A ++ + P+ T+
Sbjct: 357 GDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTF 416
Query: 363 RTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTS 422
L G C + + M+ G P + N VS C+ +F+ S VL ++
Sbjct: 417 SALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVR 476
Query: 423 K 423
+
Sbjct: 477 R 477
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 2/198 (1%)
Query: 260 NTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE- 318
N +++L G+ + ALR EMR N T N+++ YCR ++ +L +E
Sbjct: 207 NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER 266
Query: 319 -GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFRE 377
G + + YN + C++G S A+ L + M + G P+VVT+ TL G CR + +E
Sbjct: 267 LGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQE 326
Query: 378 AVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLS 437
A V EM AP + N ++ Q+G+ E+ D+ G + ++ ++
Sbjct: 327 ASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIF 386
Query: 438 MVCKPEKVPESFELLDAL 455
+CK K ++ + + L
Sbjct: 387 GLCKQAKTRKAAQFVKEL 404
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/346 (19%), Positives = 139/346 (40%), Gaps = 23/346 (6%)
Query: 115 TLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFD 174
+L++ +LH L R+F + + +R + G D ++FD
Sbjct: 114 SLETHAIVLHTLTKNRKFKSAESI------------------LRDVLVNGGVDLPAKVFD 155
Query: 175 EM--RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVC 232
+ R F +L + R A + +M +++ V + +
Sbjct: 156 ALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQM-KDYGFLPTVESCNAYMSSLL 214
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
G + A R EM + + + N +++ ++GK ++ + +L++M G V
Sbjct: 215 GQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDV 274
Query: 293 TCNVMIGEYCRENNFEEAYRILD--GVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM 350
+ N +I +C + A ++ + G G++P+V+ +N + C+ K EA +F +M
Sbjct: 275 SYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM 334
Query: 351 PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNF 410
AP+ VTY TL +G + A ++M+ G NA + LC++
Sbjct: 335 KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKT 394
Query: 411 ELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ + +L + + N + ++ C + FEL +++
Sbjct: 395 RKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI 440
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 41/208 (19%)
Query: 113 QRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA----PDACTYNILIRASCLRGHADR 168
Q + +FNTL+H CR + E + GE A P+ TYN LI +G +
Sbjct: 305 QPNVVTFNTLIHGF--CRAM-KLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEM 361
Query: 169 AFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFRE-------------- 214
AF +++M G++ D T+ LI LC+ ++ R+A + +E+ +E
Sbjct: 362 AFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIM 421
Query: 215 -----------FKL------EGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKL 254
F+L GC + L+ C+ + A ++ EMV++ + L
Sbjct: 422 GQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPL 481
Query: 255 DAALYNTLINALFKAGKKEEALRVLEEM 282
D+ + + N L GK + ++L+EM
Sbjct: 482 DSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 142 bits (358), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 187/421 (44%), Gaps = 26/421 (6%)
Query: 7 ISPFRLSS-LLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEME 65
+ FR+ + LL+ QKD ++ + F N P HSL ++ +++ L + + E
Sbjct: 79 LDSFRVKNVLLKIQKDYLLSLEFF---NWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAE 135
Query: 66 QVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHA 125
+L + ++ +P + ++ Y C T + F++L
Sbjct: 136 SILRDVLVNGGVDLPAKVFDALLYSYRE------------------CDSTPRVFDSLFKT 177
Query: 126 LLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPD 184
++F T+ + ++G P + N + + +G D A + EMR + P+
Sbjct: 178 FAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPN 237
Query: 185 QATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIK 244
T ++ C + +L + EL ++M R Y LI G C+ G LS A ++K
Sbjct: 238 PYTLNMVMSGYCRSGKLDKGIELLQDMER-LGFRATDVSYNTLIAGHCEKGLLSSALKLK 296
Query: 245 DEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRE 304
+ M K GL+ + +NTLI+ +A K +EA +V EM+ N+VT N +I Y ++
Sbjct: 297 NMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQ 356
Query: 305 NNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTY 362
+ E A+R + + G++ D++ YN + LCK+ K +A ++ + P+ T+
Sbjct: 357 GDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTF 416
Query: 363 RTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTS 422
L G C + + M+ G P + N VS C+ +F+ S VL ++
Sbjct: 417 SALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVR 476
Query: 423 K 423
+
Sbjct: 477 R 477
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 2/198 (1%)
Query: 260 NTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE- 318
N +++L G+ + ALR EMR N T N+++ YCR ++ +L +E
Sbjct: 207 NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER 266
Query: 319 -GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFRE 377
G + + YN + C++G S A+ L + M + G P+VVT+ TL G CR + +E
Sbjct: 267 LGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQE 326
Query: 378 AVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLS 437
A V EM AP + N ++ Q+G+ E+ D+ G + ++ ++
Sbjct: 327 ASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIF 386
Query: 438 MVCKPEKVPESFELLDAL 455
+CK K ++ + + L
Sbjct: 387 GLCKQAKTRKAAQFVKEL 404
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/346 (19%), Positives = 139/346 (40%), Gaps = 23/346 (6%)
Query: 115 TLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFD 174
+L++ +LH L R+F + + +R + G D ++FD
Sbjct: 114 SLETHAIVLHTLTKNRKFKSAESI------------------LRDVLVNGGVDLPAKVFD 155
Query: 175 EM--RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVC 232
+ R F +L + R A + +M +++ V + +
Sbjct: 156 ALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQM-KDYGFLPTVESCNAYMSSLL 214
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
G + A R EM + + + N +++ ++GK ++ + +L++M G V
Sbjct: 215 GQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDV 274
Query: 293 TCNVMIGEYCRENNFEEAYRILD--GVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM 350
+ N +I +C + A ++ + G G++P+V+ +N + C+ K EA +F +M
Sbjct: 275 SYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEM 334
Query: 351 PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNF 410
AP+ VTY TL +G + A ++M+ G NA + LC++
Sbjct: 335 KAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKT 394
Query: 411 ELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ + +L + + N + ++ C + FEL +++
Sbjct: 395 RKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI 440
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 91/208 (43%), Gaps = 41/208 (19%)
Query: 113 QRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA----PDACTYNILIRASCLRGHADR 168
Q + +FNTL+H CR + E + GE A P+ TYN LI +G +
Sbjct: 305 QPNVVTFNTLIHGF--CRAM-KLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEM 361
Query: 169 AFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFRE-------------- 214
AF +++M G++ D T+ LI LC+ ++ R+A + +E+ +E
Sbjct: 362 AFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIM 421
Query: 215 -----------FKL------EGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKL 254
F+L GC + L+ C+ + A ++ EMV++ + L
Sbjct: 422 GQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPL 481
Query: 255 DAALYNTLINALFKAGKKEEALRVLEEM 282
D+ + + N L GK + ++L+EM
Sbjct: 482 DSRTVHQVCNGLKHQGKDQLVKKLLQEM 509
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 141 bits (356), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 175/353 (49%), Gaps = 9/353 (2%)
Query: 111 RCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRA 169
+ Q + +FN +++AL + + ++ +G +P+ +YN LI C G +
Sbjct: 218 KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKM 277
Query: 170 FE---LFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTN 226
++ + EM V P+ TF LI ++ L + ++ +EM + ++ V Y +
Sbjct: 278 YKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ-DVKPNVISYNS 336
Query: 227 LIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGG 286
LI G+C G++S A ++D+MV G++ + YN LIN K +EAL + ++ G
Sbjct: 337 LINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQG 396
Query: 287 CEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAM 344
+ N++I YC+ ++ + + + +E G+ PDV YN + LC+ G A
Sbjct: 397 AVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAK 456
Query: 345 DLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSEL 404
LF + +G PD+VT+ L +G CR + R+A ++L EM G P N +
Sbjct: 457 KLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGY 515
Query: 405 CQEGNFELLSTVLSDLTSKGKI-CNEGIWDVVLSMVCKPEKVPESFELLDALV 456
C+EGN + + + + + + ++ N ++V+L + K+ ++ LL+ ++
Sbjct: 516 CKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEML 568
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 128/261 (49%), Gaps = 12/261 (4%)
Query: 172 LFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC---VTIYTNLI 228
++ EM R ++P+ TF +I+ LC+ ++ +A ++ E+M K+ GC V Y LI
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDM----KVYGCSPNVVSYNTLI 265
Query: 229 KGVCKIG---ELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREG 285
G CK+G ++ A + EMV+ + + +N LI+ +K +++V +EM +
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325
Query: 286 GCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEA 343
+ N ++ N +I C EA + D + GV+P++I YN + CK EA
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385
Query: 344 MDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSE 403
+D+F + +G P Y L D C+ + + + +EM +G P N ++
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445
Query: 404 LCQEGNFELLSTVLSDLTSKG 424
LC+ GN E + LTSKG
Sbjct: 446 LCRNGNIEAAKKLFDQLTSKG 466
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 148/308 (48%), Gaps = 6/308 (1%)
Query: 154 NILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFR 213
++L+ A + FE F G + + L+ L + +R + + +EM R
Sbjct: 157 DMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIR 216
Query: 214 EFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK---AG 270
K++ V + +I +CK G+++ A + ++M G + YNTLI+ K G
Sbjct: 217 R-KIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNG 275
Query: 271 KKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYN 328
K +A VL+EM E N T N++I + +++N + ++ + + VKP+VI YN
Sbjct: 276 KMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYN 335
Query: 329 VFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFK 388
+ LC GK SEA+ + M G P+++TY L +G C+ +EA+ + + +
Sbjct: 336 SLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQ 395
Query: 389 GYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPES 448
G P ++ N + C+ G + + ++ +G + + G ++ +++ +C+ + +
Sbjct: 396 GAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455
Query: 449 FELLDALV 456
+L D L
Sbjct: 456 KKLFDQLT 463
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 134/279 (48%), Gaps = 22/279 (7%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEM 176
S+N+L++ L + + + G P+ TYN LI C A ++F +
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSV 392
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
+ +G P + LI C+ ++ + F LKEEM RE + V Y LI G+C+ G
Sbjct: 393 KGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPD-VGTYNCLIAGLCRNGN 451
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
+ A ++ D++ KGL D ++ L+ + G+ +A +L+EM + G + +T N+
Sbjct: 452 IEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510
Query: 297 MIGEYCRENNFEEAYRILDGVEG---VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR 353
++ YC+E N + A + +E ++ +V YNV L ++GK +A L ++M +
Sbjct: 511 VMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570
Query: 354 GCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
G P+ +TY +V +EM+ +G+ P
Sbjct: 571 GLVPNRITYE----------------IVKEEMVDQGFVP 593
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 8/215 (3%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFD---AVTELAARAG 143
+I + + A+ F S+ T + +N L+ A + D A+ E R G
Sbjct: 372 LINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG 431
Query: 144 EFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLRE 203
PD TYN LI C G+ + A +LFD++ S+G+ PD TF L+ C R+
Sbjct: 432 I--VPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRK 488
Query: 204 AFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVK-KGLKLDAALYNTL 262
A L +EM + L+ Y ++KG CK G L A ++ +M K + L+++ A YN L
Sbjct: 489 AAMLLKEMSK-MGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVL 547
Query: 263 INALFKAGKKEEALRVLEEMREGGCEWNSVTCNVM 297
+ + GK E+A +L EM E G N +T ++
Sbjct: 548 LQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 186/423 (43%), Gaps = 43/423 (10%)
Query: 39 RPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPS 98
R F+H +Y +I L A++ EM + + ++ +T V +L ++ RA+ S
Sbjct: 120 RNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVS 179
Query: 99 RAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA--PDACTYNIL 156
+A+ F +C+ T ++N+++ L+ Q + V E+ G PD TY+ L
Sbjct: 180 KALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSAL 239
Query: 157 IRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFK 216
I + G D A LFDEM+ ++P + + TL+ + ++ +A +L EEM R
Sbjct: 240 ISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKR--- 296
Query: 217 LEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKE 273
GC V YT LIKG+ K G + A+ +M++ GL D N L+N L K G+ E
Sbjct: 297 -AGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVE 355
Query: 274 EALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGW 333
E V EM G+ P V+ YN +
Sbjct: 356 ELTNVFSEM---------------------------------GMWRCTPTVVSYNTVIKA 382
Query: 334 LCK-EGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
L + + SE F M +P TY L DG C+ + +A+++L+EM KG+ P
Sbjct: 383 LFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPP 442
Query: 393 LSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+ ++ L + +E + + +L + ++ V++ K K+ E+ +L
Sbjct: 443 CPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLF 502
Query: 453 DAL 455
+ +
Sbjct: 503 NEM 505
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 161/336 (47%), Gaps = 18/336 (5%)
Query: 44 SLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPL-LCHVITFYARARQPSRAVQ 102
++ +Y +I LG+A + E + D P+ + L +++ + +
Sbjct: 302 TVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGL--TPDVVFLNNLMNILGKVGRVEELTN 359
Query: 103 TFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA----PDACTYNILIR 158
F + +RC T+ S+NT++ AL + V+E+++ + A P TY+ILI
Sbjct: 360 VFSEMGMWRCTPTVVSYNTVIKALFESKAH--VSEVSSWFDKMKADSVSPSEFTYSILID 417
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
C ++A L +EM +G P A + +LI+ L + R +E E+F+E K
Sbjct: 418 GYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKR----YEAANELFKELKEN 473
Query: 219 -GCVT--IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEA 275
G V+ +Y +IK K G+LS A + +EM +G D YN L++ + KAG EA
Sbjct: 474 FGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEA 533
Query: 276 LRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGW 333
+L +M E GC + + N+++ + R A + + ++ G+KPD + YN LG
Sbjct: 534 NSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGC 593
Query: 334 LCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGL 369
G + EA + +M +G D +TY ++ D +
Sbjct: 594 FAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 185/463 (39%), Gaps = 53/463 (11%)
Query: 7 ISPFRLSSLLRS---QKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPE 63
+SP LS L+++ K S A +F Q R + + +Y+ +I L M
Sbjct: 160 VSPAVLSELVKALGRAKMVSKALSVFY----QAKGRKCKPTSSTYNSVILML----MQEG 211
Query: 64 MEQVLHQLHLDTRHR---VPEPL-LCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSF 119
+ +H+++ + + P+ + +I+ Y + + A++ F + Q T K +
Sbjct: 212 QHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIY 271
Query: 120 NTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRS 178
TLL + + +L G +P TY LI+ G D A+ + +M
Sbjct: 272 TTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLR 331
Query: 179 RGVRPDQATFGTLIHRLCENSRLREAFELKEEM--------------------------- 211
G+ PD L++ L + R+ E + EM
Sbjct: 332 DGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVS 391
Query: 212 -----FREFKLEGCVT---IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLI 263
F + K + Y+ LI G CK + A + +EM +KG A Y +LI
Sbjct: 392 EVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLI 451
Query: 264 NALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVK 321
NAL KA + E A + +E++E +S VMI + + EA + + + +G
Sbjct: 452 NALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSG 511
Query: 322 PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVV 381
PDV YN + + K G +EA L M GC D+ ++ + +G R R A+ +
Sbjct: 512 PDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEM 571
Query: 382 LDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
+ + G P N + G FE + ++ ++ KG
Sbjct: 572 FETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKG 614
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 12/277 (4%)
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
+ R + D +T+ TLI L E E + +E+ R + + + L+K + +
Sbjct: 118 KRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKM 177
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEM-REGGCEWNSVTCN 295
+S A + + + K ++ YN++I L + G+ E+ V EM EG C +++T +
Sbjct: 178 VSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYS 237
Query: 296 VMIGEYCRENNFEEAYRILDGVEG--VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR 353
+I Y + + A R+ D ++ ++P Y LG K GK +A+DLF +M R
Sbjct: 238 ALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRA 297
Query: 354 GCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELL 413
GC+P V TY L GL + + EA +M+ G P LN ++ L + G E L
Sbjct: 298 GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEEL 357
Query: 414 STVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFE 450
+ V S++ G+W ++V + FE
Sbjct: 358 TNVFSEM---------GMWRCTPTVVSYNTVIKALFE 385
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 177/375 (47%), Gaps = 10/375 (2%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
+I+ Y+ A + ++P + ++NT+++ L +++ E+ A G
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 147 -APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
+PD+ TY L+ +C +G ++F +MRSR V PD F +++ + L +A
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 206 ELKEEMFREFKLEGCV---TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTL 262
F K G + IYT LI+G C+ G +S A +++EM+++G +D YNT+
Sbjct: 396 MY----FNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTI 451
Query: 263 INALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--V 320
++ L K EA ++ EM E +S T ++I +C+ N + A + ++ +
Sbjct: 452 LHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI 511
Query: 321 KPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVV 380
+ DV+ YN L K G A +++ DM + P ++Y L + LC EA
Sbjct: 512 RLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFR 571
Query: 381 VLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVC 440
V DEM+ K P N+ + C+ GN + L + S+G + + ++ ++
Sbjct: 572 VWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFV 631
Query: 441 KPEKVPESFELLDAL 455
+ E + ++F L+ +
Sbjct: 632 REENMSKAFGLVKKM 646
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 110/356 (30%), Positives = 165/356 (46%), Gaps = 23/356 (6%)
Query: 63 EMEQVLHQLHLDTRHRVPEPLLC--HVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFN 120
E E+V + +R VP+ L+C +++ + R+ +A+ F S+ + L N
Sbjct: 358 ETEKVFSDMR--SRDVVPD-LVCFSSMMSLFTRSGNLDKALMYFNSVK----EAGLIPDN 410
Query: 121 TLLHALLT--CRQ--FDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDE 175
+ L+ CR+ L + G A D TYN ++ C R A +LF+E
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 176 MRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIG 235
M R + PD T LI C+ L+ A EL ++M +E ++ V Y L+ G K+G
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM-KEKRIRLDVVTYNTLLDGFGKVG 529
Query: 236 ELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCN 295
++ A I +MV K + Y+ L+NAL G EA RV +EM + + CN
Sbjct: 530 DIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICN 589
Query: 296 VMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR 353
MI YCR N + L+ + EG PD I YN + +E S+A L M
Sbjct: 590 SMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEE 649
Query: 354 --GCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN----LNAFVSE 403
G PDV TY ++ G CR Q +EA VVL +M+ +G P +N FVS+
Sbjct: 650 QGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQ 705
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 184/396 (46%), Gaps = 25/396 (6%)
Query: 38 HRP-FRHSLLSYDLIITKLGRAKMLPEMEQVLHQL-------------HLDTRHR---VP 80
H P F+H+ LS +I L R+ L + + L ++ LD+
Sbjct: 105 HFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSN 164
Query: 81 EPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFD---AVTE 137
+ + +I Y +AR+ A + F + S ++ + N L+ +L+ + V +
Sbjct: 165 DSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQ 224
Query: 138 LAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCE 197
+R+G + T NI++ A C G ++ +++ +GV PD T+ TLI
Sbjct: 225 EISRSGV--GINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSS 282
Query: 198 NSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAA 257
+ EAFEL M + G T Y +I G+CK G+ A + EM++ GL D+
Sbjct: 283 KGLMEEAFELMNAMPGKGFSPGVYT-YNTVINGLCKHGKYERAKEVFAEMLRSGLSPDST 341
Query: 258 LYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV 317
Y +L+ K G E +V +MR + V + M+ + R N ++A + V
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSV 401
Query: 318 E--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQF 375
+ G+ PD + Y + + C++G S AM+L ++M ++GCA DVVTY T+ GLC+ +
Sbjct: 402 KEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKML 461
Query: 376 REAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
EA + +EM + P S L + C+ GN +
Sbjct: 462 GEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQ 497
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 153/323 (47%), Gaps = 7/323 (2%)
Query: 79 VPEPLLCHV-ITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTE 137
+P+ ++ + I Y R S A+ + C + ++NT+LH L + +
Sbjct: 407 IPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADK 466
Query: 138 LAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLC 196
L E PD+ T ILI C G+ A ELF +M+ + +R D T+ TL+
Sbjct: 467 LFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFG 526
Query: 197 ENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDA 256
+ + A E+ +M + L ++ Y+ L+ +C G L+ AFR+ DEM+ K +K
Sbjct: 527 KVGDIDTAKEIWADMVSKEILPTPIS-YSILVNALCSKGHLAEAFRVWDEMISKNIKPTV 585
Query: 257 ALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDG 316
+ N++I ++G + LE+M G + ++ N +I + RE N +A+ ++
Sbjct: 586 MICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKK 645
Query: 317 VE----GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRW 372
+E G+ PDV YN L C++ + EA + M RG PD TY + +G
Sbjct: 646 MEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQ 705
Query: 373 RQFREAVVVLDEMMFKGYAPLSK 395
EA + DEM+ +G++P K
Sbjct: 706 DNLTEAFRIHDEMLQRGFSPDDK 728
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 155/357 (43%), Gaps = 44/357 (12%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEM 176
+ N +++AL + + V ++ E G PD TYN LI A +G + AFEL + M
Sbjct: 237 TLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAM 296
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
+G P T+ T+I+ LC++ + A E+ EM R L T Y +L+ CK G+
Sbjct: 297 PGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRS-GLSPDSTTYRSLLMEACKKGD 355
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
+ ++ +M + + D ++++++ ++G ++AL ++E G ++V +
Sbjct: 356 VVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTI 415
Query: 297 MIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
+I YCR+ A + + + +G DV+ YN L LCK EA LF++M R
Sbjct: 416 LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERA 475
Query: 355 CAPD-----------------------------------VVTYRTLFDGLCRWRQFREAV 379
PD VVTY TL DG + A
Sbjct: 476 LFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAK 535
Query: 380 VVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG-----KICNEGI 431
+ +M+ K P + + V+ LC +G+ V ++ SK ICN I
Sbjct: 536 EIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMI 592
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 151/337 (44%), Gaps = 19/337 (5%)
Query: 128 TCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRS--RGVRPDQ 185
T A+ + R+G +C ++ R+ R E+ + + S +
Sbjct: 112 TSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSR------LEIVNSLDSTFSNCGSND 165
Query: 186 ATFGTLIHRLCENSRLREAFE----LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAF 241
+ F LI + +LREA E L+ + F ++ C LI + +IG + A+
Sbjct: 166 SVFDLLIRTYVQARKLREAHEAFTLLRSKGF-TVSIDAC----NALIGSLVRIGWVELAW 220
Query: 242 RIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEY 301
+ E+ + G+ ++ N ++NAL K GK E+ L +++E G + VT N +I Y
Sbjct: 221 GVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAY 280
Query: 302 CRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDV 359
+ EEA+ +++ + +G P V YN + LCK GK+ A ++F +M R G +PD
Sbjct: 281 SSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDS 340
Query: 360 VTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSD 419
TYR+L C+ E V +M + P ++ +S + GN + +
Sbjct: 341 TTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNS 400
Query: 420 LTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ G I + I+ +++ C+ + + L + ++
Sbjct: 401 VKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEML 437
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 150/350 (42%), Gaps = 10/350 (2%)
Query: 112 CQRTLKSFNTLLHALLTCRQF----DAVTELAARAGEFGAPDACTYNILIRASCLRGHAD 167
C F+ L+ + R+ +A T L ++ G + DAC N LI + G +
Sbjct: 161 CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSK-GFTVSIDAC--NALIGSLVRIGWVE 217
Query: 168 RAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNL 227
A+ ++ E+ GV + T +++ LC++ ++ + ++ +E + + Y L
Sbjct: 218 LAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQV-QEKGVYPDIVTYNTL 276
Query: 228 IKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGC 287
I G + AF + + M KG YNT+IN L K GK E A V EM G
Sbjct: 277 ISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGL 336
Query: 288 EWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VKPDVIGYNVFLGWLCKEGKWSEAMD 345
+S T ++ E C++ + E ++ + V PD++ ++ + + G +A+
Sbjct: 337 SPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALM 396
Query: 346 LFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELC 405
F+ + G PD V Y L G CR A+ + +EM+ +G A N + LC
Sbjct: 397 YFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLC 456
Query: 406 QEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
+ + +++T + + +++ CK + + EL +
Sbjct: 457 KRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKM 506
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 158/345 (45%), Gaps = 7/345 (2%)
Query: 115 TLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFD 174
T ++N + AL + D EL + APD +YN L+ G A LFD
Sbjct: 342 TTSTYNIYICALCDFGRIDDARELLS---SMAAPDVVSYNTLMHGYIKMGKFVEASLLFD 398
Query: 175 EMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKI 234
++R+ + P T+ TLI LCE+ L A LKEEM + +T YT L+KG K
Sbjct: 399 DLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVIT-YTTLVKGFVKN 457
Query: 235 GELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTC 294
G LS A + DEM++KG+K D Y T + G ++A R+ EEM +T
Sbjct: 458 GNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTI 517
Query: 295 -NVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
NV I C+ N +A + G+ PD + Y + + G++ A +L+ +M
Sbjct: 518 YNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEML 577
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
R+ P V+TY L G + + +A EM +G P NA + +C+ GN +
Sbjct: 578 RKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNID 637
Query: 412 LLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
L + +G N+ + +++S C EK E +L ++
Sbjct: 638 EAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEML 682
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 132/303 (43%), Gaps = 40/303 (13%)
Query: 115 TLKSFNTLLHALLTCRQFDAVTELAAR-AGEFGAPDACTYNILIRASCLRGHADRAFELF 173
++ ++NTL+ L + L + PD TY L++ G+ A E++
Sbjct: 408 SIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVY 467
Query: 174 DEMRSRGVRPDQATFGTL------------------------------------IHRLCE 197
DEM +G++PD + T I LC+
Sbjct: 468 DEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCK 527
Query: 198 NSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAA 257
L +A E + ++FR + VT YT +I+G + G+ A + DEM++K L
Sbjct: 528 VGNLVKAIEFQRKIFRVGLVPDHVT-YTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVI 586
Query: 258 LYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV 317
Y LI KAG+ E+A + EM++ G N +T N ++ C+ N +EAYR L +
Sbjct: 587 TYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKM 646
Query: 318 --EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQF 375
EG+ P+ Y + + C KW E + L+ +M + PD T+R LF L + +
Sbjct: 647 EEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHES 706
Query: 376 REA 378
RE
Sbjct: 707 REV 709
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 7/253 (2%)
Query: 173 FDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVC 232
F++M +G P ++ L ++ + +A + E M E + V + ++
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMI-EHGIMPTVITFNTMLDSCF 249
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
K G+L +I EM ++ ++ YN LIN K GK EEA R +MR G
Sbjct: 250 KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY 309
Query: 293 TCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM 350
+ N +I YC++ F++A+ + D + G+ P YN+++ LC G+ +A +L M
Sbjct: 310 SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSM 369
Query: 351 PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNF 410
APDVV+Y TL G + +F EA ++ D++ P N + LC+ GN
Sbjct: 370 ----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNL 425
Query: 411 ELLSTVLSDLTSK 423
E + ++T++
Sbjct: 426 EGAQRLKEEMTTQ 438
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 117/277 (42%), Gaps = 3/277 (1%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P NI+++ ++A +++ M G+ P TF T++ + L ++
Sbjct: 201 PSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKI 260
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
EM R +E Y LI G K G++ A R +M + G + +N LI
Sbjct: 261 WLEMKRR-NIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYC 319
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGY 327
K G ++A V +EM G + T N+ I C ++A +L + PDV+ Y
Sbjct: 320 KQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA--PDVVSY 377
Query: 328 NVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMF 387
N + K GK+ EA LF D+ P +VTY TL DGLC A + +EM
Sbjct: 378 NTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTT 437
Query: 388 KGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
+ P V + GN + + V ++ KG
Sbjct: 438 QLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKG 474
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 123/306 (40%), Gaps = 26/306 (8%)
Query: 154 NILIRA-SCLRGHADRAFELFDEM-RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM 211
N+LIR + +R + AF F+ + R V+ + F ++ L EN + EA+ + E
Sbjct: 86 NLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAE-- 143
Query: 212 FREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGK 271
R L G+ +I +L + K L L +Y K
Sbjct: 144 -RSIDL------------GMHEIDDLLIDGSFDKLIALKLLDLLLWVYT-------KKSM 183
Query: 272 KEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNV 329
E+ L E+M G + CN+++ +A + + + G+ P VI +N
Sbjct: 184 AEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNT 243
Query: 330 FLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKG 389
L K G ++ +M RR VTY L +G + + EA +M G
Sbjct: 244 MLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSG 303
Query: 390 YAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESF 449
+A + N + C++G F+ V ++ + G +++ + +C ++ ++
Sbjct: 304 FAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDAR 363
Query: 450 ELLDAL 455
ELL ++
Sbjct: 364 ELLSSM 369
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/378 (26%), Positives = 178/378 (47%), Gaps = 21/378 (5%)
Query: 48 YDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPL-LCHVITFYARARQPSRAVQTFLS 106
++ +++ LGR + M ++ L +D P+ + L +I ++R+ A++ F
Sbjct: 297 FNALLSCLGRNMDISRMNDLV--LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVF-- 352
Query: 107 IPSFRCQRT-----LKS----FNTLLHALLTCRQFDAVTELAARAG--EFGAPDACTYNI 155
R +RT +K+ FNTL+ L + EL R E AP+A TYN
Sbjct: 353 -EKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNC 411
Query: 156 LIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREF 215
LI C G + A E+ M+ ++P+ T T++ +C + L A +M +E
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKE- 470
Query: 216 KLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEA 275
++G V Y LI C + + A ++M++ G DA +Y LI+ L + + +A
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 276 LRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGW 333
+RV+E+++EGG + + N++IG +C +NN E+ Y +L + EG KPD I YN + +
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 334 LCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM-MFKGYAP 392
K + + M G P V TY + D C + EA+ + +M + P
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 393 LSKNLNAFVSELCQEGNF 410
+ N ++ + GNF
Sbjct: 651 NTVIYNILINAFSKLGNF 668
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 159/320 (49%), Gaps = 15/320 (4%)
Query: 132 FDAVTELAARAGEFGAPDACTYNILIRASCLRGHAD--RAFELFDEMRSRGVRPDQATFG 189
+D +++L AP +N L+ SCL + D R +L +M +RPD T G
Sbjct: 279 WDILSDLMKNKTPLEAP---PFNALL--SCLGRNMDISRMNDLVLKMDEVKIRPDVVTLG 333
Query: 190 TLIHRLCENSRLREAFELKEEMFREFKLEGCV----TIYTN-LIKGVCKIGELSWAFRIK 244
LI+ LC++ R+ EA E+ E+M + +G V +I+ N LI G+CK+G L A +
Sbjct: 334 ILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 245 DEM-VKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCR 303
M +++ +A YN LI+ +AGK E A V+ M+E + N VT N ++G CR
Sbjct: 394 VRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Query: 304 ENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVT 361
+ A + EGVK +V+ Y + C +AM + M GC+PD
Sbjct: 454 HHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKI 513
Query: 362 YRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLT 421
Y L GLC+ R+ +A+ V++++ G++ N + C + N E + +L+D+
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDME 573
Query: 422 SKGKICNEGIWDVVLSMVCK 441
+GK + ++ ++S K
Sbjct: 574 KEGKKPDSITYNTLISFFGK 593
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 153/353 (43%), Gaps = 9/353 (2%)
Query: 46 LSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFL 105
+ ++ +I L + L E E++L ++ L+ R +I Y RA + A +
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 106 SIPSFRCQRTLKSFNTLLHALLTCRQFD---AVTELAARAGEFGAPDACTYNILIRASCL 162
+ + + + NT++ + CR AV E + TY LI A C
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGM--CRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCS 488
Query: 163 RGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVT 222
+ ++A +++M G PD + LI LC+ R +A + E++ +E +
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL-KEGGFSLDLL 547
Query: 223 IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEM 282
Y LI C + + +M K+G K D+ YNTLI+ K E R++E+M
Sbjct: 548 AYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQM 607
Query: 283 REGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV---EGVKPDVIGYNVFLGWLCKEGK 339
RE G + T +I YC +EA ++ + V P+ + YN+ + K G
Sbjct: 608 REDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGN 667
Query: 340 WSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
+ +A+ L +M + P+V TY LF L Q + ++DEM+ + P
Sbjct: 668 FGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEP 720
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/379 (23%), Positives = 159/379 (41%), Gaps = 48/379 (12%)
Query: 120 NTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGH---ADRAFELFDEM 176
+ LL L F + E+ + F P+ T +I++ +G ++ L
Sbjct: 193 DVLLRNGLVDDAFKVLDEMLQKESVF-PPNRITADIVLH-EVWKGRLLTEEKIIALISRF 250
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFR----------------------- 213
S GV P+ I LC+N+R A+++ ++ +
Sbjct: 251 SSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDI 310
Query: 214 -----------EFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKG------LKLDA 256
E K+ V LI +CK + A + ++M K +K D+
Sbjct: 311 SRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADS 370
Query: 257 ALYNTLINALFKAGKKEEALRVLEEMR-EGGCEWNSVTCNVMIGEYCRENNFEEAYRILD 315
+NTLI+ L K G+ +EA +L M+ E C N+VT N +I YCR E A ++
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVS 430
Query: 316 GV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWR 373
+ + +KP+V+ N +G +C+ + A+ F DM + G +VVTY TL C
Sbjct: 431 RMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVS 490
Query: 374 QFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWD 433
+A+ ++M+ G +P +K A +S LCQ V+ L G + ++
Sbjct: 491 NVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYN 550
Query: 434 VVLSMVCKPEKVPESFELL 452
+++ + C + +E+L
Sbjct: 551 MLIGLFCDKNNTEKVYEML 569
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 19/226 (8%)
Query: 116 LKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFE--- 171
L ++N L+ + V E+ + G PD+ TYN LI S H D FE
Sbjct: 546 LLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLI--SFFGKHKD--FESVE 601
Query: 172 -LFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKG 230
+ ++MR G+ P T+G +I C L EA +L ++M K+ IY LI
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661
Query: 231 VCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWN 290
K+G A +K+EM K ++ + YN L L + + E L++++EM E CE N
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPN 721
Query: 291 SVTCNVMI------GEYCRENNFEEAYRILDGVEGVKPDVIGYNVF 330
+T +++ E + F + Y + E P ++VF
Sbjct: 722 QITMEILMERLSGSDELVKLRKFMQGYSVASPTEKASP----FDVF 763
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 177/378 (46%), Gaps = 21/378 (5%)
Query: 48 YDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPL-LCHVITFYARARQPSRAVQTFLS 106
++ +++ LGR + M ++ L +D P+ + L +I ++R+ A++ F
Sbjct: 297 FNALLSCLGRNMDISRMNDLV--LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVF-- 352
Query: 107 IPSFRCQRT-----LKS----FNTLLHALLTCRQFDAVTELAARAG--EFGAPDACTYNI 155
R +RT +K+ FNTL+ L + EL R E P+A TYN
Sbjct: 353 -EQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNC 411
Query: 156 LIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREF 215
LI C G + A E+ M+ ++P+ T T++ +C + L A +M +E
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKE- 470
Query: 216 KLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEA 275
++G V Y LI C + + A ++M++ G DA +Y LI+ L + + +A
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 276 LRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGW 333
+RV+E+++EGG + + N++IG +C +NN E+ Y +L + EG KPD I YN + +
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 334 LCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM-MFKGYAP 392
K + + M G P V TY + D C + EA+ + +M + P
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 393 LSKNLNAFVSELCQEGNF 410
+ N ++ + GNF
Sbjct: 651 NTVIYNILINAFSKLGNF 668
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 159/320 (49%), Gaps = 15/320 (4%)
Query: 132 FDAVTELAARAGEFGAPDACTYNILIRASCLRGHAD--RAFELFDEMRSRGVRPDQATFG 189
+D +++L AP +N L+ SCL + D R +L +M +RPD T G
Sbjct: 279 WDILSDLMKNKTPLEAP---PFNALL--SCLGRNMDISRMNDLVLKMDEVKIRPDVVTLG 333
Query: 190 TLIHRLCENSRLREAFELKEEMFREFKLEGCV----TIYTN-LIKGVCKIGELSWAFRIK 244
LI+ LC++ R+ EA E+ E+M + +G V +I+ N LI G+CK+G L A +
Sbjct: 334 ILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 245 DEM-VKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCR 303
M +++ +A YN LI+ +AGK E A V+ M+E + N VT N ++G CR
Sbjct: 394 VRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Query: 304 ENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVT 361
+ A + EGVK +V+ Y + C +AM + M GC+PD
Sbjct: 454 HHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKI 513
Query: 362 YRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLT 421
Y L GLC+ R+ +A+ V++++ G++ N + C + N E + +L+D+
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573
Query: 422 SKGKICNEGIWDVVLSMVCK 441
+GK + ++ ++S K
Sbjct: 574 KEGKKPDSITYNTLISFFGK 593
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 157/354 (44%), Gaps = 11/354 (3%)
Query: 46 LSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCH-VITFYARARQPSRAVQTF 104
+ ++ +I L + L E E++L ++ L+ R VP + + +I Y RA + A +
Sbjct: 371 IHFNTLIDGLCKVGRLKEAEELLVRMKLEERC-VPNAVTYNCLIDGYCRAGKLETAKEVV 429
Query: 105 LSIPSFRCQRTLKSFNTLLHALLTCRQFD---AVTELAARAGEFGAPDACTYNILIRASC 161
+ + + + NT++ + CR AV E + TY LI A C
Sbjct: 430 SRMKEDEIKPNVVTVNTIVGGM--CRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACC 487
Query: 162 LRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCV 221
+ ++A +++M G PD + LI LC+ R +A + E++ +E +
Sbjct: 488 SVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKL-KEGGFSLDL 546
Query: 222 TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEE 281
Y LI C + + +M K+G K D+ YNTLI+ K E R++E+
Sbjct: 547 LAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQ 606
Query: 282 MREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV---EGVKPDVIGYNVFLGWLCKEG 338
MRE G + T +I YC +EA ++ + V P+ + YN+ + K G
Sbjct: 607 MREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLG 666
Query: 339 KWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
+ +A+ L +M + P+V TY LF L Q + ++DEM+ + P
Sbjct: 667 NFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEP 720
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 140/329 (42%), Gaps = 43/329 (13%)
Query: 167 DRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFR------------- 213
++ L S GV P+ I LC+N+R A+++ ++ +
Sbjct: 241 EKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNAL 300
Query: 214 ---------------------EFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKG- 251
E K+ V LI +CK + A + ++M K
Sbjct: 301 LSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRT 360
Query: 252 -----LKLDAALYNTLINALFKAGKKEEALRVLEEMR-EGGCEWNSVTCNVMIGEYCREN 305
+K D+ +NTLI+ L K G+ +EA +L M+ E C N+VT N +I YCR
Sbjct: 361 DDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAG 420
Query: 306 NFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYR 363
E A ++ + + +KP+V+ N +G +C+ + A+ F DM + G +VVTY
Sbjct: 421 KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYM 480
Query: 364 TLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSK 423
TL C +A+ ++M+ G +P +K A +S LCQ V+ L
Sbjct: 481 TLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEG 540
Query: 424 GKICNEGIWDVVLSMVCKPEKVPESFELL 452
G + +++++ + C + +E+L
Sbjct: 541 GFSLDLLAYNMLIGLFCDKNNAEKVYEML 569
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 101/226 (44%), Gaps = 19/226 (8%)
Query: 116 LKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFE--- 171
L ++N L+ + V E+ + G PD+ TYN LI S H D FE
Sbjct: 546 LLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLI--SFFGKHKD--FESVE 601
Query: 172 -LFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKG 230
+ ++MR G+ P T+G +I C L EA +L ++M K+ IY LI
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661
Query: 231 VCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWN 290
K+G A +K+EM K ++ + YN L L + + E L++++EM E CE N
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQSCEPN 721
Query: 291 SVTCNVMI------GEYCRENNFEEAYRILDGVEGVKPDVIGYNVF 330
+T +++ E + F + Y + E P ++VF
Sbjct: 722 QITMEILMERLSGSDELVKLRKFMQGYSVASPTEKASP----FDVF 763
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 177/378 (46%), Gaps = 21/378 (5%)
Query: 48 YDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPL-LCHVITFYARARQPSRAVQTFLS 106
++ +++ LGR + M ++ L +D P+ + L +I ++R+ A++ F
Sbjct: 297 FNALLSCLGRNMDISRMNDLV--LKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVF-- 352
Query: 107 IPSFRCQRT-----LKS----FNTLLHALLTCRQFDAVTELAARAG--EFGAPDACTYNI 155
R +RT +K+ FNTL+ L + EL R E P+A TYN
Sbjct: 353 -EQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNC 411
Query: 156 LIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREF 215
LI C G + A E+ M+ ++P+ T T++ +C + L A +M +E
Sbjct: 412 LIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKE- 470
Query: 216 KLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEA 275
++G V Y LI C + + A ++M++ G DA +Y LI+ L + + +A
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 276 LRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGW 333
+RV+E+++EGG + + N++IG +C +NN E+ Y +L + EG KPD I YN + +
Sbjct: 531 IRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISF 590
Query: 334 LCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM-MFKGYAP 392
K + + M G P V TY + D C + EA+ + +M + P
Sbjct: 591 FGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNP 650
Query: 393 LSKNLNAFVSELCQEGNF 410
+ N ++ + GNF
Sbjct: 651 NTVIYNILINAFSKLGNF 668
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 159/320 (49%), Gaps = 15/320 (4%)
Query: 132 FDAVTELAARAGEFGAPDACTYNILIRASCLRGHAD--RAFELFDEMRSRGVRPDQATFG 189
+D +++L AP +N L+ SCL + D R +L +M +RPD T G
Sbjct: 279 WDILSDLMKNKTPLEAP---PFNALL--SCLGRNMDISRMNDLVLKMDEVKIRPDVVTLG 333
Query: 190 TLIHRLCENSRLREAFELKEEMFREFKLEGCV----TIYTN-LIKGVCKIGELSWAFRIK 244
LI+ LC++ R+ EA E+ E+M + +G V +I+ N LI G+CK+G L A +
Sbjct: 334 ILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELL 393
Query: 245 DEM-VKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCR 303
M +++ +A YN LI+ +AGK E A V+ M+E + N VT N ++G CR
Sbjct: 394 VRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCR 453
Query: 304 ENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVT 361
+ A + EGVK +V+ Y + C +AM + M GC+PD
Sbjct: 454 HHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKI 513
Query: 362 YRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLT 421
Y L GLC+ R+ +A+ V++++ G++ N + C + N E + +L+D+
Sbjct: 514 YYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDME 573
Query: 422 SKGKICNEGIWDVVLSMVCK 441
+GK + ++ ++S K
Sbjct: 574 KEGKKPDSITYNTLISFFGK 593
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 140/329 (42%), Gaps = 43/329 (13%)
Query: 167 DRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFR------------- 213
++ L S GV P+ I LC+N+R A+++ ++ +
Sbjct: 241 EKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNAL 300
Query: 214 ---------------------EFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKG- 251
E K+ V LI +CK + A + ++M K
Sbjct: 301 LSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRT 360
Query: 252 -----LKLDAALYNTLINALFKAGKKEEALRVLEEMR-EGGCEWNSVTCNVMIGEYCREN 305
+K D+ +NTLI+ L K G+ +EA +L M+ E C N+VT N +I YCR
Sbjct: 361 DDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAG 420
Query: 306 NFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYR 363
E A ++ + + +KP+V+ N +G +C+ + A+ F DM + G +VVTY
Sbjct: 421 KLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYM 480
Query: 364 TLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSK 423
TL C +A+ ++M+ G +P +K A +S LCQ V+ L
Sbjct: 481 TLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEG 540
Query: 424 GKICNEGIWDVVLSMVCKPEKVPESFELL 452
G + +++++ + C + +E+L
Sbjct: 541 GFSLDLLAYNMLIGLFCDKNNAEKVYEML 569
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 9/174 (5%)
Query: 116 LKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFE--- 171
L ++N L+ + V E+ + G PD+ TYN LI S H D FE
Sbjct: 546 LLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLI--SFFGKHKD--FESVE 601
Query: 172 -LFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKG 230
+ ++MR G+ P T+G +I C L EA +L ++M K+ IY LI
Sbjct: 602 RMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINA 661
Query: 231 VCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMRE 284
K+G A +K+EM K ++ + YN L L + + E L++++EM E
Sbjct: 662 FSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVE 715
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 138 bits (348), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 167/356 (46%), Gaps = 4/356 (1%)
Query: 38 HRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQP 97
R + HS+ +Y ++I + + M +++ + + + C V+ YARA++
Sbjct: 127 QRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMR--KKKMLNVETFCIVMRKYARAQKV 184
Query: 98 SRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILI 157
A+ F + + L +FN LL AL + E+ + PD+ TY+IL+
Sbjct: 185 DEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILL 244
Query: 158 RASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKL 217
+ +A E+F EM G PD T+ ++ LC+ R+ EA + M
Sbjct: 245 EGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSI-C 303
Query: 218 EGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALR 277
+ IY+ L+ L A EM + G+K D A++N+LI A KA + + R
Sbjct: 304 KPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYR 363
Query: 278 VLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGV-KPDVIGYNVFLGWLCK 336
VL+EM+ G NS +CN+++ +EA+ + + V +PD Y + + C+
Sbjct: 364 VLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVCEPDADTYTMVIKMFCE 423
Query: 337 EGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
+ + A ++ M ++G P + T+ L +GLC R ++A V+L+EM+ G P
Sbjct: 424 KKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRP 479
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 153/346 (44%), Gaps = 5/346 (1%)
Query: 113 QRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFEL 172
+ ++++++ ++ + RQ+ + +L + + T+ I++R D A
Sbjct: 131 EHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDEAIYA 190
Query: 173 FDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVC 232
F+ M + P+ F L+ LC++ +R+A E+ E M F + Y+ L++G
Sbjct: 191 FNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDRFTPDS--KTYSILLEGWG 248
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
K L A + EM+ G D Y+ +++ L KAG+ +EAL ++ M C+ +
Sbjct: 249 KEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTF 308
Query: 293 TCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM 350
+V++ Y EN EEA +E G+K DV +N +G CK + + +M
Sbjct: 309 IYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEM 368
Query: 351 PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNF 410
+G P+ + + L + EA V +M+ K P + + C++
Sbjct: 369 KSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEM 427
Query: 411 ELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
E V + KG + + V+++ +C+ ++ LL+ ++
Sbjct: 428 ETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMI 473
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 110/254 (43%), Gaps = 16/254 (6%)
Query: 47 SYDLIITKLGRAKMLPEMEQVLHQL-----HLD-TRHRVPEPLLCHVITFYARARQPSRA 100
+Y +++ G+ LP+ +V ++ H D + + +LC +A + A
Sbjct: 239 TYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILC-------KAGRVDEA 291
Query: 101 VQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRA 159
+ S+ C+ T ++ L+H T + + + G D +N LI A
Sbjct: 292 LGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGA 351
Query: 160 SCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEG 219
C + + EM+S+GV P+ + ++ L E EAF++ +M + E
Sbjct: 352 FCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK--VCEP 409
Query: 220 CVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVL 279
YT +IK C+ E+ A ++ M KKG+ ++ LIN L + ++A +L
Sbjct: 410 DADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLL 469
Query: 280 EEMREGGCEWNSVT 293
EEM E G + VT
Sbjct: 470 EEMIEMGIRPSGVT 483
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 109/246 (44%), Gaps = 21/246 (8%)
Query: 45 LLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITF--------YARARQ 96
+++Y +++ L +A + E ++ + +P +C TF Y +
Sbjct: 272 IVTYSIMVDILCKAGRVDEALGIVRSM---------DPSICKPTTFIYSVLVHTYGTENR 322
Query: 97 PSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNI 155
AV TFL + + + FN+L+ A + V + G P++ + NI
Sbjct: 323 LEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNI 382
Query: 156 LIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREF 215
++R RG D AF++F +M + PD T+ +I CE + A ++ + M R+
Sbjct: 383 ILRHLIERGEKDEAFDVFRKM-IKVCEPDADTYTMVIKMFCEKKEMETADKVWKYM-RKK 440
Query: 216 KLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEA 275
+ + ++ LI G+C+ A + +EM++ G++ + L L K ++E+
Sbjct: 441 GVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKE-EREDV 499
Query: 276 LRVLEE 281
L+ L E
Sbjct: 500 LKFLNE 505
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 153/321 (47%), Gaps = 26/321 (8%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTEL-AARAGEF 145
++ + +A +A + F + C + ++ L+HA L ++ EL E
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Query: 146 GAPDACTYNILIRASCLRGHADRAFELFDEM-RSRGV---------------RPDQATFG 189
P+ TY+ LI C G ++A ++F+ M S+ V RP+ T+G
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643
Query: 190 TLIHRLCENSRLREAFELKEEMFREFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDE 246
L+ C++ R+ EA +L + M +EGC +Y LI G+CK+G+L A +K E
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAM----SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTE 699
Query: 247 MVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENN 306
M + G Y++LI+ FK +++ A +VL +M E C N V MI C+
Sbjct: 700 MSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGK 759
Query: 307 FEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRT 364
+EAY+++ +E G +P+V+ Y + GK ++L M +G AP+ VTYR
Sbjct: 760 TDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRV 819
Query: 365 LFDGLCRWRQFREAVVVLDEM 385
L D C+ A +L+EM
Sbjct: 820 LIDHCCKNGALDVAHNLLEEM 840
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 164/404 (40%), Gaps = 61/404 (15%)
Query: 112 CQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILI------------- 157
C + K FN+L+HA T +L + + G P YNILI
Sbjct: 368 CYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCD 427
Query: 158 ----------------------------RASCLRGHADRAFELFDEMRSRGVRPDQATFG 189
R C G ++AF + EM +G PD +T+
Sbjct: 428 LLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487
Query: 190 TLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVK 249
+++ LC S++ AF L EEM R L V YT ++ CK G + A + +EM +
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRG-GLVADVYTYTIMVDSFCKAGLIEQARKWFNEMRE 546
Query: 250 KGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEE 309
G + Y LI+A KA K A + E M GC N VT + +I +C+ E+
Sbjct: 547 VGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEK 606
Query: 310 AYRILDGVEGVK------------------PDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
A +I + + G K P+V+ Y L CK + EA L M
Sbjct: 607 ACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMS 666
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
GC P+ + Y L DGLC+ + EA V EM G+ ++ + + +
Sbjct: 667 MEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQD 726
Query: 412 LLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
L S VLS + N I+ ++ +CK K E+++L+ +
Sbjct: 727 LASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMM 770
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 160/382 (41%), Gaps = 63/382 (16%)
Query: 130 RQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFG 189
+ F + E+ G+ PD TY+ ++ C + AF LF+EM+ G+ D T+
Sbjct: 466 KAFSVIREMI---GQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYT 522
Query: 190 TLIHRLCENSRLREAFELKEEMFREFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDE 246
++ C+ + +A + F E + GC V YT LI K ++S+A + +
Sbjct: 523 IMVDSFCKAGLIEQA----RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFET 578
Query: 247 MVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEM----------------REGGCEWN 290
M+ +G + Y+ LI+ KAG+ E+A ++ E M + N
Sbjct: 579 MLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 291 SVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFH 348
VT ++ +C+ + EEA ++LD + EG +P+ I Y+ + LCK GK EA ++
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKT 698
Query: 349 DMPRRG-----------------------------------CAPDVVTYRTLFDGLCRWR 373
+M G CAP+VV Y + DGLC+
Sbjct: 699 EMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVG 758
Query: 374 QFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWD 433
+ EA ++ M KG P A + G E +L + SKG N +
Sbjct: 759 KTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYR 818
Query: 434 VVLSMVCKPEKVPESFELLDAL 455
V++ CK + + LL+ +
Sbjct: 819 VLIDHCCKNGALDVAHNLLEEM 840
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 182/453 (40%), Gaps = 21/453 (4%)
Query: 15 LLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLD 74
+LR PS F+ Q ++H+ Y+ ++ + R E+ L Q+ D
Sbjct: 138 VLRLIARPSAVISFFVWAGRQIG---YKHTAPVYNALVDLIVRDDDEKVPEEFLQQIRDD 194
Query: 75 TRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDA 134
+ E L ++ + R S A++ + FR + + ++N L+ A L + D+
Sbjct: 195 DKEVFGE-FLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDS 253
Query: 135 VTELAARAGEFGA--PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLI 192
+ L R D T + C G A L + + PD + LI
Sbjct: 254 AS-LIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLI 309
Query: 193 HRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGL 252
LCE S EA + M L VT Y+ L+ G +L R+ + M+ +G
Sbjct: 310 SGLCEASLFEEAMDFLNRMRATSCLPNVVT-YSTLLCGCLNKKQLGRCKRVLNMMMMEGC 368
Query: 253 KLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENN------ 306
++N+L++A +G A ++L++M + G V N++IG C + +
Sbjct: 369 YPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDL 428
Query: 307 ---FEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYR 363
E+AY + GV + I + F LC GK+ +A + +M +G PD TY
Sbjct: 429 LDLAEKAYSEMLAA-GVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYS 487
Query: 364 TLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSK 423
+ + LC + A ++ +EM G V C+ G E +++
Sbjct: 488 KVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREV 547
Query: 424 GKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
G N + ++ K +KV + EL + ++
Sbjct: 548 GCTPNVVTYTALIHAYLKAKKVSYANELFETML 580
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 143/341 (41%), Gaps = 40/341 (11%)
Query: 46 LSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCH--VITFYARARQPSRAVQT 103
+ YD +I L + L E ++V ++ + H P L + +I Y + ++ A +
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEM---SEHGFPATLYTYSSLIDRYFKVKRQDLASKV 731
Query: 104 FLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCL 162
+ C + + ++ L + D +L E G P+ TY +I +
Sbjct: 732 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGM 791
Query: 163 RGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVT 222
G + EL + M S+GV P+ T+ LI C+N L A L EEM ++
Sbjct: 792 IGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEM-KQTHWPTHTA 850
Query: 223 IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEM 282
Y +I+G K E + + DE+ + ++Y LI+ L KA + E ALR+LEE+
Sbjct: 851 GYRKVIEGFNK--EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908
Query: 283 REGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSE 342
T + + +Y YN + LC K
Sbjct: 909 ---------ATFSATLVDYSST----------------------YNSLIESLCLANKVET 937
Query: 343 AMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
A LF +M ++G P++ ++ +L GL R + EA+++LD
Sbjct: 938 AFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 35/213 (16%)
Query: 112 CQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAF 170
CQ + ++ ++ + + EL R G G AP+ TY +LI C G D A
Sbjct: 775 CQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAH 834
Query: 171 ELFDEMR-------SRGVR--------------------------PDQATFGTLIHRLCE 197
L +EM+ + G R P + + LI L +
Sbjct: 835 NLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIK 894
Query: 198 NSRLREAFELKEEMFR-EFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDA 256
RL A L EE+ L + Y +LI+ +C ++ AF++ EM KKG+ +
Sbjct: 895 AQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEM 954
Query: 257 ALYNTLINALFKAGKKEEALRVLEEMREGGCEW 289
+ +LI LF+ K EAL +L+ + +W
Sbjct: 955 QSFCSLIKGLFRNSKISEALLLLDFISHMEIQW 987
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 171/388 (44%), Gaps = 74/388 (19%)
Query: 7 ISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQ 66
++P + + + KDPS + + + + +++P SL Y L+I K G+AKM E+E+
Sbjct: 60 LAPNEVLKIFDNVKDPSFLLPAYQHYSKRKDYQP-TESL--YALMINKFGQAKMYDEIEE 116
Query: 67 VLHQLHLDTRHRVPEPLLCHVITFYAR-ARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHA 125
V+ + L+ R R E +++ Y A + +RA++ +P F C + KSFN +L+
Sbjct: 117 VMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNL 176
Query: 126 LLTCRQFDAVTELAARAGEFGAP-DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPD 184
L++ + FD + ++ A + G DAC NILI+ C G+ + A +L DE + RP+
Sbjct: 177 LVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPN 236
Query: 185 QATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIK 244
TF LI C + EAF+L E M +E RI+
Sbjct: 237 VMTFSPLIRGFCNKGKFEEAFKLLERMEKE---------------------------RIE 269
Query: 245 DEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRE 304
+ + +N LI+ L K G+ EE + +LE M+ GCE N T
Sbjct: 270 PDTIT---------FNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQ--------- 311
Query: 305 NNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRT 364
E Y +LD + EA ++ M G P ++Y+
Sbjct: 312 ---EVLYGLLDKKRNL---------------------EAKEMMSQMISWGMRPSFLSYKK 347
Query: 365 LFDGLCRWRQFREAVVVLDEMMFKGYAP 392
+ GLC + E VL +M+ G+ P
Sbjct: 348 MVLGLCETKSVVEMDWVLRQMVNHGFVP 375
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 104/196 (53%), Gaps = 3/196 (1%)
Query: 249 KKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFE 308
K G+++DA N LI L ++G E AL++L+E + N +T + +I +C + FE
Sbjct: 195 KLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFE 254
Query: 309 EAYRILDGVEG--VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLF 366
EA+++L+ +E ++PD I +N+ + L K+G+ E +DL M +GC P+ TY+ +
Sbjct: 255 EAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVL 314
Query: 367 DGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKI 426
GL ++ EA ++ +M+ G P + V LC+ + + VL + + G +
Sbjct: 315 YGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFV 374
Query: 427 CNEGI-WDVVLSMVCK 441
+ W VV +V K
Sbjct: 375 PKTLMWWKVVQCVVSK 390
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 89/190 (46%), Gaps = 2/190 (1%)
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIG 326
AG+ A+ +L M + GC +S + N ++ F+E ++I GV+ D
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACC 204
Query: 327 YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMM 386
N+ + LC+ G A+ L + P++ P+V+T+ L G C +F EA +L+ M
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 387 FKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVP 446
+ P + N +S L ++G E +L + KG N G + VL + ++
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNL 324
Query: 447 ESFELLDALV 456
E+ E++ ++
Sbjct: 325 EAKEMMSQMI 334
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 141/283 (49%), Gaps = 7/283 (2%)
Query: 176 MRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIG 235
M G RPD TF TL++ LC R+ +A L + M E Y +I G+CK+G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP-----YGTIINGLCKMG 55
Query: 236 ELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCN 295
+ A + +M + +K +YN +I+ L K G A + EM + G + +T +
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 296 VMIGEYCRENNFEEAYRIL-DGVE-GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR 353
MI +CR + +A ++L D +E + PDV+ ++ + L KEGK SEA +++ DM RR
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 354 GCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELL 413
G P +TY ++ DG C+ + +A +LD M K +P + ++ C+ +
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 414 STVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ ++ +G + N + ++ C+ + + +LL+ ++
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMI 278
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 148/310 (47%), Gaps = 7/310 (2%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD T+ L+ C G +A L D M G +P +GT+I+ LC+ A L
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+M E ++ V IY +I +CK G A + EM KG+ D Y+ +I++
Sbjct: 64 LSKM-EETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFC 122
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVI 325
++G+ +A ++L +M E + VT + +I +E EA I + G+ P I
Sbjct: 123 RSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTI 182
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
YN + CK+ + ++A + M + C+PDVVT+ TL +G C+ ++ + + EM
Sbjct: 183 TYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 242
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKV 445
+G + + CQ G+ + +L+ + S G N + +L+ +C +++
Sbjct: 243 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKEL 302
Query: 446 PESFELLDAL 455
++F +L+ L
Sbjct: 303 RKAFAILEDL 312
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 1/171 (0%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD T++ LI A G A E++ +M RG+ P T+ ++I C+ RL +A +
Sbjct: 144 PDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRM 203
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+ M + VT ++ LI G CK + I EM ++G+ + Y TLI+
Sbjct: 204 LDSMASKSCSPDVVT-FSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC 262
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE 318
+ G + A +L M G N +T M+ C + +A+ IL+ ++
Sbjct: 263 QVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQ 313
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 6/201 (2%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAA---RAG 143
+I + R+ + + A Q + + + +F+ L++AL+ + E+ R G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 144 EFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLRE 203
F P TYN +I C + + A + D M S+ PD TF TLI+ C+ R+
Sbjct: 177 IF--PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDN 234
Query: 204 AFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLI 263
E+ EM R + VT YT LI G C++G+L A + + M+ G+ + + +++
Sbjct: 235 GMEIFCEMHRRGIVANTVT-YTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSML 293
Query: 264 NALFKAGKKEEALRVLEEMRE 284
+L + +A +LE++++
Sbjct: 294 ASLCSKKELRKAFAILEDLQK 314
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 156/330 (47%), Gaps = 6/330 (1%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFGAP-DACTYNILIRASCLRGHADRAFELFDEM 176
S+NT++ ++ + ELA G T+ ILI A C G D A EM
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM 238
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
+ G+ D + +LI C+ L L +E+ E C Y LI+G CK+G+
Sbjct: 239 KFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVL-ERGDSPCAITYNTLIRGFCKLGQ 297
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
L A I + M+++G++ + Y LI+ L GK +EAL++L M E E N+VT N+
Sbjct: 298 LKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNI 357
Query: 297 MIGEYCRENNFEEAYRILDGVEG--VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
+I + C++ +A I++ ++ +PD I YN+ LG LC +G EA L + M +
Sbjct: 358 IINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDS 417
Query: 355 --CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFEL 412
PDV++Y L GLC+ + +A+ + D ++ K A N ++ + G+
Sbjct: 418 SYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNK 477
Query: 413 LSTVLSDLTSKGKICNEGIWDVVLSMVCKP 442
+ ++ + N + ++ CK
Sbjct: 478 AMELWKQISDSKIVRNSDTYTAMIDGFCKT 507
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/345 (29%), Positives = 164/345 (47%), Gaps = 13/345 (3%)
Query: 118 SFNTLLHALLT---CRQFD---AVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFE 171
+FN H +L CR + AV+ L PD +YN +IR C ++A E
Sbjct: 139 AFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALE 198
Query: 172 LFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGV 231
L +EM+ G T+G LI C+ ++ EA +EM + LE + +YT+LI+G
Sbjct: 199 LANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM-KFMGLEADLVVYTSLIRGF 257
Query: 232 CKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNS 291
C GEL + DE++++G A YNTLI K G+ +EA + E M E G N
Sbjct: 258 CDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNV 317
Query: 292 VTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHD 349
T +I C +EA ++L+ + + +P+ + YN+ + LCK+G ++A+++
Sbjct: 318 YTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVEL 377
Query: 350 MPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYA---PLSKNLNAFVSELCQ 406
M +R PD +TY L GLC EA +L +M K + P + NA + LC+
Sbjct: 378 MKKRRTRPDNITYNILLGGLCAKGDLDEASKLL-YLMLKDSSYTDPDVISYNALIHGLCK 436
Query: 407 EGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFEL 451
E + L K + +++L+ K V ++ EL
Sbjct: 437 ENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMEL 481
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 147/312 (47%), Gaps = 11/312 (3%)
Query: 152 TYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM 211
+NIL++ C +A L EMR + PD ++ T+I CE L +A EL EM
Sbjct: 144 NHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM 203
Query: 212 FREFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
K GC + + LI CK G++ A EM GL+ D +Y +LI
Sbjct: 204 ----KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCD 259
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIG 326
G+ + + +E+ E G ++T N +I +C+ +EA I + + GV+P+V
Sbjct: 260 CGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319
Query: 327 YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMM 386
Y + LC GK EA+ L + M + P+ VTY + + LC+ +AV +++ M
Sbjct: 320 YTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMK 379
Query: 387 FKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGI--WDVVLSMVCKPEK 444
+ P + N + LC +G+ + S +L + + + ++ ++ +CK +
Sbjct: 380 KRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENR 439
Query: 445 VPESFELLDALV 456
+ ++ ++ D LV
Sbjct: 440 LHQALDIYDLLV 451
Score = 122 bits (305), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 139/312 (44%), Gaps = 3/312 (0%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P+A TYNI+I C G A E+ + M+ R RPD T+ L+ LC L EA +L
Sbjct: 350 PNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409
Query: 208 KEEMFREFKL-EGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
M ++ + V Y LI G+CK L A I D +V+K D N L+N+
Sbjct: 410 LYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNST 469
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDG--VEGVKPDV 324
KAG +A+ + +++ + NS T MI +C+ A +L V ++P V
Sbjct: 470 LKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSV 529
Query: 325 IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDE 384
YN L LCKEG +A LF +M R PDVV++ + DG + + A +L
Sbjct: 530 FDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVG 589
Query: 385 MMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEK 444
M G +P + ++ + G + + + G + I D VL +
Sbjct: 590 MSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGE 649
Query: 445 VPESFELLDALV 456
+ EL+ LV
Sbjct: 650 TDKLTELVKKLV 661
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 133/286 (46%), Gaps = 3/286 (1%)
Query: 169 AFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLI 228
AF + M RG + L+ LC N +A L EM R L V Y +I
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN-SLMPDVFSYNTVI 184
Query: 229 KGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCE 288
+G C+ EL A + +EM G + LI+A KAGK +EA+ L+EM+ G E
Sbjct: 185 RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE 244
Query: 289 WNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDL 346
+ V +I +C + + D V G P I YN + CK G+ EA ++
Sbjct: 245 ADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEI 304
Query: 347 FHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQ 406
F M RG P+V TY L DGLC + +EA+ +L+ M+ K P + N +++LC+
Sbjct: 305 FEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCK 364
Query: 407 EGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+G ++ + + + ++++L +C + E+ +LL
Sbjct: 365 DGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLL 410
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/273 (20%), Positives = 117/273 (42%), Gaps = 10/273 (3%)
Query: 190 TLIHRLCENS--RLREAFELKEEMFREFKLEGCVTIY--TNLIKGVCKIGELSWAFRIKD 245
T + LCE+S +L+ A + F++ G + NL+ + + AF
Sbjct: 41 TKLRSLCEDSNPQLKNAVSV----FQQAVDSGSSLAFAGNNLMAKLVRSRNHELAFSFYR 96
Query: 246 EMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCREN 305
+M++ ++ + L+ + K A VL M + G +N N+++ CR
Sbjct: 97 KMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNL 156
Query: 306 NFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYR 363
+A +L + + PDV YN + C+ + +A++L ++M GC+ +VT+
Sbjct: 157 ECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWG 216
Query: 364 TLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSK 423
L D C+ + EA+ L EM F G + + C G + + ++ +
Sbjct: 217 ILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLER 276
Query: 424 GKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
G ++ ++ CK ++ E+ E+ + ++
Sbjct: 277 GDSPCAITYNTLIRGFCKLGQLKEASEIFEFMI 309
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 110/369 (29%), Positives = 170/369 (46%), Gaps = 30/369 (8%)
Query: 78 RVPEPLLCH--VITFYARARQPSRAVQTFLSI----PSFRCQRTLKSFNTLL-HALLTCR 130
R+P L H V+ Y + V+ F I P+FR R+ +F LL HA CR
Sbjct: 80 RIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRS--TFLILLSHA---CR 134
Query: 131 QFDAVTELAARAGEFGA-----PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQ 185
D+ R PD T +I +R+ C G D A +L E+ + PD
Sbjct: 135 APDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDT 194
Query: 186 ATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKD 245
T+ L+ LC+ L +E +EM +F ++ + +T LI VC L A +
Sbjct: 195 YTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVS 254
Query: 246 EMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCREN 305
++ G K D LYNT++ K EA+ V ++M+E G E + +T N +I +
Sbjct: 255 KLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAG 314
Query: 306 NFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYR 363
EEA L + G +PD Y + +C++G+ A+ L +M RGCAP+ TY
Sbjct: 315 RVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYN 374
Query: 364 TLFDGLCRWRQFREAVVVLDEMM--------FKGYAPLSKNL--NAFVSELCQEGNFELL 413
TL GLC+ R + + L EMM GYA L ++L + V+E + ++ +
Sbjct: 375 TLLHGLCKARLMDKG-MELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVD 433
Query: 414 STVLSDLTS 422
S LSD ++
Sbjct: 434 SKSLSDASA 442
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 146/315 (46%), Gaps = 8/315 (2%)
Query: 148 PDACTYNILIRASCLRGHAD--RAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
P T+ IL+ +C + + + M + G+ PDQ T + LCE R+ EA
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKK-GLKLDAALYNTLIN 264
+L +E+ + T Y L+K +CK +L + DEM +K D + LI+
Sbjct: 180 DLMKELTEKHSPPDTYT-YNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILID 238
Query: 265 ALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKP 322
+ + EA+ ++ ++ G + + N ++ +C + EA + + EGV+P
Sbjct: 239 NVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEP 298
Query: 323 DVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVL 382
D I YN + L K G+ EA M G PD TY +L +G+CR + A+ +L
Sbjct: 299 DQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLL 358
Query: 383 DEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG-KICNEGIWDVVLSMVCK 441
+EM +G AP N + LC+ + + + S G K+ + G +V S+V K
Sbjct: 359 EEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLV-K 417
Query: 442 PEKVPESFELLDALV 456
KV E++E+ D V
Sbjct: 418 SGKVAEAYEVFDYAV 432
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 125/279 (44%), Gaps = 6/279 (2%)
Query: 182 RPDQATFGTLIHRLCE--NSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSW 239
RP ++TF L+ C +S + + M LE ++ +C+ G +
Sbjct: 119 RPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNN-GLEPDQVTTDIAVRSLCETGRVDE 177
Query: 240 AFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREG-GCEWNSVTCNVMI 298
A + E+ +K D YN L+ L K ++EMR+ + + V+ ++I
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILI 237
Query: 299 GEYCRENNFEEAYRILD--GVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCA 356
C N EA ++ G G KPD YN + C K SEA+ ++ M G
Sbjct: 238 DNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE 297
Query: 357 PDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTV 416
PD +TY TL GL + + EA + L M+ GY P + + ++ +C++G ++
Sbjct: 298 PDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSL 357
Query: 417 LSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
L ++ ++G N+ ++ +L +CK + + EL + +
Sbjct: 358 LEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMM 396
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 14/171 (8%)
Query: 118 SFNTLLHALLTC-RQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEM 176
++NTL+ L R +A L PD TY L+ C +G + A L +EM
Sbjct: 302 TYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEM 361
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFRE-FKLEGCVTIYTNLIKGVCKIG 235
+RG P+ T+ TL+H LC+ + + EL E M KLE Y L++ + K G
Sbjct: 362 EARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLES--NGYATLVRSLVKSG 419
Query: 236 ELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGG 286
+++ A+ + D V DA+ Y+TL E L+ L++ +E G
Sbjct: 420 KVAEAYEVFDYAVDSKSLSDASAYSTL----------ETTLKWLKKAKEQG 460
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 169/354 (47%), Gaps = 14/354 (3%)
Query: 45 LLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRV-PEPLLCH-VITFYARARQPSRAVQ 102
++SY ++I L RA + + ++ + + R V P+ C ++ AR+ A +
Sbjct: 149 VVSYTILINGLFRAGKVTDAVEIWNAM---IRSGVSPDNKACAALVVGLCHARKVDLAYE 205
Query: 103 TFLS-IPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRAS 160
I S R + + +N L+ + + L + + G PD TYN+L+
Sbjct: 206 MVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYY 265
Query: 161 CLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEG- 219
RA + EM G++ D ++ L+ R C S + + M +E + G
Sbjct: 266 YDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNF---MVKEMEPRGF 322
Query: 220 C-VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
C V Y+ LI+ C+ A+R+ +EM +KG+ ++ Y +LI A + G A ++
Sbjct: 323 CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKL 382
Query: 279 LEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCK 336
L++M E G + + ++ C+ N ++AY + + + + PD I YN + LC+
Sbjct: 383 LDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCR 442
Query: 337 EGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGY 390
G+ +EA+ LF DM + C PD +T++ + GL R ++ A V D+MM KG+
Sbjct: 443 SGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGF 496
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 146/312 (46%), Gaps = 6/312 (1%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD +Y ILI G A E+++ M GV PD L+ LC ++ A+E+
Sbjct: 147 PDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEM 206
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
E + +++ +Y LI G CK G + A +K M K G + D YN L+N +
Sbjct: 207 VAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYY 266
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKP----D 323
+ A V+ EM G + ++ + N ++ +CR ++ ++ Y + V+ ++P D
Sbjct: 267 DNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFM--VKEMEPRGFCD 324
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
V+ Y+ + C+ +A LF +M ++G +VVTY +L R A +LD
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLD 384
Query: 384 EMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPE 443
+M G +P + LC+ GN + V +D+ + ++ ++S +C+
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444
Query: 444 KVPESFELLDAL 455
+V E+ +L + +
Sbjct: 445 RVTEAIKLFEDM 456
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 184/448 (41%), Gaps = 49/448 (10%)
Query: 37 NHRPFRHSLL--SYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPE--------PLLCH 86
+ +P SL+ +Y I+ L + K ++ +L + +T +P+ LLC
Sbjct: 69 DMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDM--ETLGFIPDIWAFNVYLDLLCR 126
Query: 87 -------VITFYA---RARQPSRAVQTFLSIPSFRCQRTL------------------KS 118
V TF+ R R+P T L FR + K+
Sbjct: 127 ENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKA 186
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFGAPDACT--YNILIRASCLRGHADRAFELFDEM 176
L+ L R+ D E+ A + T YN LI C G ++A L M
Sbjct: 187 CAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYM 246
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIG- 235
G PD T+ L++ +N+ L+ A + EM R ++ Y L+K C++
Sbjct: 247 SKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRS-GIQLDAYSYNQLLKRHCRVSH 305
Query: 236 -ELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTC 294
+ + F +K EM +G D Y+TLI +A +A R+ EEMR+ G N VT
Sbjct: 306 PDKCYNFMVK-EMEPRGF-CDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTY 363
Query: 295 NVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPR 352
+I + RE N A ++LD + G+ PD I Y L LCK G +A +F+DM
Sbjct: 364 TSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIE 423
Query: 353 RGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFEL 412
PD ++Y +L GLCR + EA+ + ++M K P + L +
Sbjct: 424 HEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSA 483
Query: 413 LSTVLSDLTSKGKICNEGIWDVVLSMVC 440
V + KG + + D ++ C
Sbjct: 484 AYKVWDQMMDKGFTLDRDVSDTLIKASC 511
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/333 (22%), Positives = 132/333 (39%), Gaps = 45/333 (13%)
Query: 164 GHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTI 223
G D A ++FDEMR R + I L SR FEL E ++ + K G I
Sbjct: 23 GMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESR----FELAEAIYWDMKPMGFSLI 78
Query: 224 ---YTNLIKGVCKIGELS------------------WAFRIKDE---------------- 246
Y+ I G+CK+ + WAF + +
Sbjct: 79 PFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFF 138
Query: 247 -MVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCREN 305
MV++G + D Y LIN LF+AGK +A+ + M G ++ C ++ C
Sbjct: 139 CMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHAR 198
Query: 306 NFEEAYRIL-DGVEG--VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTY 362
+ AY ++ + ++ VK + YN + CK G+ +A L M + GC PD+VTY
Sbjct: 199 KVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTY 258
Query: 363 RTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTS 422
L + + A V+ EM+ G + + N + C+ + + +
Sbjct: 259 NVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEME 318
Query: 423 KGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
C+ + ++ C+ +++ L + +
Sbjct: 319 PRGFCDVVSYSTLIETFCRASNTRKAYRLFEEM 351
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 110/228 (48%), Gaps = 3/228 (1%)
Query: 224 YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMR 283
Y + I + K G + A ++ DEM ++ + YN I L + + E A + +M+
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMK 71
Query: 284 EGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWS 341
G T + I C+ F+ +L +E G PD+ +NV+L LC+E K
Sbjct: 72 PMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVG 131
Query: 342 EAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFV 401
A+ F M +RG PDVV+Y L +GL R + +AV + + M+ G +P +K A V
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALV 191
Query: 402 SELCQEGNFELLSTVLSDLTSKGKI-CNEGIWDVVLSMVCKPEKVPES 448
LC +L ++++ ++ + +++ ++S CK ++ ++
Sbjct: 192 VGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKA 239
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 82/198 (41%), Gaps = 33/198 (16%)
Query: 259 YNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE 318
Y + I L K+G + A++V +EMR +YR+
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRH------------------------SSYRVFS--- 44
Query: 319 GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREA 378
YN F+G L +E ++ A ++ DM G + TY GLC+ ++F
Sbjct: 45 ------FDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLI 98
Query: 379 VVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSM 438
+L +M G+ P N ++ LC+E + +G+ + + ++++
Sbjct: 99 DALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILING 158
Query: 439 VCKPEKVPESFELLDALV 456
+ + KV ++ E+ +A++
Sbjct: 159 LFRAGKVTDAVEIWNAMI 176
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 122/495 (24%), Positives = 207/495 (41%), Gaps = 54/495 (10%)
Query: 7 ISPFRLSSLLRS---QKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPE 63
+SP +S +L+S ++ P +A+ F Q + + H+L Y ++ L AK +
Sbjct: 114 LSPNFVSFVLKSDEIREKPDIAWSFFCWSRKQ---KKYTHNLECYVSLVDVLALAKDVDR 170
Query: 64 MEQVLHQLHLDTRHRVPEPLLCH--VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNT 121
+ V ++ + P + +I + + + + + + TL ++N
Sbjct: 171 IRFVSSEIK---KFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNF 227
Query: 122 LLHALLTCRQFDAVTELAARAGEFG--APDACTYNILIRASCLRGHADRAFELFDEMRSR 179
L++ L++ D+ E E G PD TYN +I+ C G +A E +M +R
Sbjct: 228 LMNGLVSAMFVDS-AERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETR 286
Query: 180 GVRPDQATFGTLIHR-----------------------------------LCENSRLREA 204
G D+ T+ T+I LC+ +L E
Sbjct: 287 GHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEG 346
Query: 205 FELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLIN 264
+ + E M R+ V IYT LI G K G + A R+ M+ +G K D Y+ ++N
Sbjct: 347 YTVFENMIRKGSKPN-VAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVN 405
Query: 265 ALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKP 322
L K G+ EEAL R G NS+ + +I + +EA R+ + + +G
Sbjct: 406 GLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTR 465
Query: 323 DVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR-GCAPDVVTYRTLFDGLCRWRQFREAVVV 381
D YN + K K EA+ LF M GC V TY L G+ + + EA+ +
Sbjct: 466 DSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKL 525
Query: 382 LDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCK 441
D M+ KG P + A + LC G +L +L G I + D++ + +CK
Sbjct: 526 WDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACEDMI-NTLCK 584
Query: 442 PEKVPESFELLDALV 456
++ E+ +L D +
Sbjct: 585 AGRIKEACKLADGIT 599
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 100/228 (43%), Gaps = 8/228 (3%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
A ++ Y+ LI G D A LF+EM +G D + LI ++ ++ EA
Sbjct: 429 AINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIA 488
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
L + M E + V YT L+ G+ K A ++ D M+ KG+ AA + L L
Sbjct: 489 LFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGL 548
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIG 326
+GK A ++L+E+ G ++ C MI C+ +EA ++ DG+ +V G
Sbjct: 549 CLSGKVARACKILDELAPMGVILDA-ACEDMINTLCKAGRIKEACKLADGITERGREVPG 607
Query: 327 --YNVFLGWLCKEGKWSEAMDLFHD-----MPRRGCAPDVVTYRTLFD 367
V + L K GK AM L H R G V + TL +
Sbjct: 608 RIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSVKRRVKFTTLLE 655
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 190/413 (46%), Gaps = 7/413 (1%)
Query: 41 FRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHV-ITFYARARQPSR 99
+ ++ ++ + I LGRA + E ++L ++ D P+ + V I AR+
Sbjct: 254 LKPNVYTFTICIRVLGRAGKINEAYEILKRM--DDEGCGPDVVTYTVLIDALCTARKLDC 311
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIR 158
A + F + + R + ++ TLL R D+V + + + G PD T+ IL+
Sbjct: 312 AKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVD 371
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
A C G+ AF+ D MR +G+ P+ T+ TLI L RL +A EL M ++
Sbjct: 372 ALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM-ESLGVK 430
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
Y I K G+ A ++M KG+ + N + +L KAG+ EA ++
Sbjct: 431 PTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQI 490
Query: 279 LEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCK 336
+++ G +SVT N+M+ Y + +EA ++L + G +PDVI N + L K
Sbjct: 491 FYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYK 550
Query: 337 EGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN 396
+ EA +F M P VVTY TL GL + + +EA+ + + M+ KG P +
Sbjct: 551 ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTIT 610
Query: 397 LNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESF 449
N LC+ L +L + G + + ++ ++ + K +V E+
Sbjct: 611 FNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 663
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 170/360 (47%), Gaps = 26/360 (7%)
Query: 38 HRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQP 97
H+P R ++Y ++ + + L ++Q ++ D VP+ V+TF
Sbjct: 324 HKPDR---VTYITLLDRFSDNRDLDSVKQFWSEMEKD--GHVPD-----VVTFTILVDAL 373
Query: 98 SRAV---QTFLSIPSFRCQR---TLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDA 150
+A + F ++ R Q L ++NTL+ LL + D EL G P A
Sbjct: 374 CKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTA 433
Query: 151 CTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEE 210
TY + I G + A E F++M+++G+ P+ ++ L + R REA ++
Sbjct: 434 YTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA----KQ 489
Query: 211 MFREFKLEGCV---TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+F K G V Y ++K K+GE+ A ++ EM++ G + D + N+LIN L+
Sbjct: 490 IFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLY 549
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVI 325
KA + +EA ++ M+E + VT N ++ + +EA + +G+ +G P+ I
Sbjct: 550 KADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTI 609
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
+N LCK + + A+ + M GC PDV TY T+ GL + Q +EA+ +M
Sbjct: 610 TFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQM 669
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 179/417 (42%), Gaps = 9/417 (2%)
Query: 41 FRHSLLSYDLIITKLGRAKMLPEMEQVLHQLH-LDTRHRVPEPLLCHVITFYARARQPSR 99
FR SL +Y ++ LG+ + + + +L ++ L + V +C I RA + +
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTIC--IRVLGRAGKINE 276
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTEL--AARAGEFGAPDACTYNILI 157
A + + C + ++ L+ AL T R+ D E+ + G PD TY L+
Sbjct: 277 AYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH-KPDRVTYITLL 335
Query: 158 RASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKL 217
D + + EM G PD TF L+ LC+ EAF+ + M R+ +
Sbjct: 336 DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVM-RDQGI 394
Query: 218 EGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALR 277
+ Y LI G+ ++ L A + M G+K A Y I+ K+G AL
Sbjct: 395 LPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 278 VLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLC 335
E+M+ G N V CN + + EA +I G++ G+ PD + YN+ +
Sbjct: 455 TFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYS 514
Query: 336 KEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSK 395
K G+ EA+ L +M GC PDV+ +L + L + + EA + M P
Sbjct: 515 KVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVV 574
Query: 396 NLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
N ++ L + G + + + KG N ++ + +CK ++V + ++L
Sbjct: 575 TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 157/363 (43%), Gaps = 9/363 (2%)
Query: 78 RVPEPLLCHVITFYARARQPSRAVQTFLSIP-SFRCQRTLKSFNTLLHALLTCRQFDAVT 136
R + +L +I + + S A F Q L ++N L+ LL +
Sbjct: 746 RDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQ 805
Query: 137 ELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRL 195
++ + G PD TYN L+ A G D FEL+ EM + + T +I L
Sbjct: 806 DVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGL 865
Query: 196 CENSRLREAFELKEEMF--REFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLK 253
+ + +A +L ++ R+F C Y LI G+ K G L A ++ + M+ G +
Sbjct: 866 VKAGNVDDALDLYYDLMSDRDFSPTACT--YGPLIDGLSKSGRLYEAKQLFEGMLDYGCR 923
Query: 254 LDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRI 313
+ A+YN LIN KAG+ + A + + M + G + T +V++ C +E
Sbjct: 924 PNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHY 983
Query: 314 LDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM-PRRGCAPDVVTYRTLFDGLC 370
++ G+ PDV+ YN+ + L K + EA+ LF++M RG PD+ TY +L L
Sbjct: 984 FKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLG 1043
Query: 371 RWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEG 430
EA + +E+ G P NA + G E V + + G N G
Sbjct: 1044 IAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTG 1103
Query: 431 IWD 433
++
Sbjct: 1104 TYE 1106
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 118/262 (45%), Gaps = 12/262 (4%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
D TY + ++ ++G +A +MR G + ++ LIH L ++ EA E+
Sbjct: 152 DTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEV- 210
Query: 209 EEMFREFKLEG---CVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
+R LEG + Y++L+ G+ K ++ + EM GLK + + I
Sbjct: 211 ---YRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRV 267
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGV--KPD 323
L +AGK EA +L+ M + GC + VT V+I C + A + + ++ KPD
Sbjct: 268 LGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
+ Y L + +M + G PDVVT+ L D LC+ F EA LD
Sbjct: 328 RVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLD 387
Query: 384 EMMFKGYAPLSKNLNAFVSELC 405
M +G P NL+ + + +C
Sbjct: 388 VMRDQGILP---NLHTYNTLIC 406
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 126/306 (41%), Gaps = 41/306 (13%)
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIR 158
A FL + S C + ++N LL A + D + EL + T+NI+I
Sbjct: 804 AQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVIS 863
Query: 159 ASCLRGHADRAFELF-DEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKL 217
G+ D A +L+ D M R P T+G LI L ++ RL EA +L E M ++
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGML-DYGC 922
Query: 218 EGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALR 277
IY LI G K GE A + MVK+G++ D Y+ L++ L G+ +E L
Sbjct: 923 RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLH 982
Query: 278 VLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE------------------- 318
+E++E G + V N++I + + EEA + + ++
Sbjct: 983 YFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNL 1042
Query: 319 -------------------GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDV 359
G++P+V +N + GK A ++ M G +P+
Sbjct: 1043 GIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNT 1102
Query: 360 VTYRTL 365
TY L
Sbjct: 1103 GTYEQL 1108
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/393 (24%), Positives = 159/393 (40%), Gaps = 19/393 (4%)
Query: 68 LHQLHLDTR--HRVPEPLLCHVITFYARARQPS---RAVQTFLSIPSFRCQRTLKSFNTL 122
H L + +R H + + C V++ + S ++ + LS S R LKSF
Sbjct: 40 FHALKIGSRKKHWRRKSMRCSVVSMKSSDFSGSMIRKSSKPDLS-SSEEVTRGLKSFPD- 97
Query: 123 LHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVR 182
T F +A + C Y ++ A + G + +FD M+ R ++
Sbjct: 98 -----TDSSFSYFKSVAGNLNLVHTTETCNY--MLEALRVDGKLEEMAYVFDLMQKRIIK 150
Query: 183 PDQATFGTLIHRLCENSRLREA-FELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAF 241
D T+ T+ L L++A + L++ REF Y LI + K + A
Sbjct: 151 RDTNTYLTIFKSLSVKGGLKQAPYALRK--MREFGFVLNAYSYNGLIHLLLKSRFCTEAM 208
Query: 242 RIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEY 301
+ M+ +G + Y++L+ L K + + +L+EM G + N T + I
Sbjct: 209 EVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVL 268
Query: 302 CRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDV 359
R EAY IL + EG PDV+ Y V + LC K A ++F M PD
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDR 328
Query: 360 VTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSD 419
VTY TL D R EM G+ P V LC+ GNF L
Sbjct: 329 VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDV 388
Query: 420 LTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+ +G + N ++ ++ + + ++ ++ EL
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELF 421
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 124/304 (40%), Gaps = 40/304 (13%)
Query: 156 LIRASCLRGHADRAFELFDEM-RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFRE 214
+IR SC + A LF++ + GV+P T+ LI L E + E+ +++F +
Sbjct: 755 IIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLE----ADMIEIAQDVFLQ 810
Query: 215 FKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEE 274
K GC+ D A YN L++A K+GK +E
Sbjct: 811 VKSTGCIP--------------------------------DVATYNFLLDAYGKSGKIDE 838
Query: 275 ALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA---YRILDGVEGVKPDVIGYNVFL 331
+ +EM CE N++T N++I + N ++A Y L P Y +
Sbjct: 839 LFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898
Query: 332 GWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYA 391
L K G+ EA LF M GC P+ Y L +G + + A + M+ +G
Sbjct: 899 DGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 958
Query: 392 PLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFEL 451
P K + V LC G + +L G + ++++++ + K ++ E+ L
Sbjct: 959 PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVL 1018
Query: 452 LDAL 455
+ +
Sbjct: 1019 FNEM 1022
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 154/336 (45%), Gaps = 6/336 (1%)
Query: 39 RPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPS 98
R FR ++S + ++ L ++ E+ L L LD C +I + + +
Sbjct: 246 RGFRVGIVSCNKVLKGLSVDQI--EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMD 303
Query: 99 RAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAP-DACTYNILI 157
RA F + + L +++TL+ +L ++A G D ++ I
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 158 RASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKL 217
G A ++ M +G+ P+ T+ LI LC++ R+ EAF + ++ + +
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR-GM 422
Query: 218 EGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALR 277
E + Y++LI G CK G L F + ++M+K G D +Y L++ L K G A+R
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482
Query: 278 VLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRI--LDGVEGVKPDVIGYNVFLGWLC 335
+M N V N +I +CR N F+EA ++ L G+ G+KPDV + +
Sbjct: 483 FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSI 542
Query: 336 KEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCR 371
EG+ EA+ LF M + G PD + Y TL D C+
Sbjct: 543 MEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCK 578
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 134/302 (44%), Gaps = 3/302 (0%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
+ +N LI C D A ++F M G++PD ATF T++ RL EA L
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
MF+ LE Y LI CK + + ++ D M + + D A+ N +I+ LFK
Sbjct: 555 FRMFK-MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFK 613
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILD--GVEGVKPDVIG 326
+ E+A + + EG E + VT N MI YC +EA RI + V P+ +
Sbjct: 614 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 673
Query: 327 YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMM 386
+ + LCK A+ +F M +G P+ VTY L D + + + +EM
Sbjct: 674 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 733
Query: 387 FKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVP 446
KG +P + + + LC+ G + + + + + + +++ CK ++
Sbjct: 734 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 793
Query: 447 ES 448
E+
Sbjct: 794 EA 795
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/309 (24%), Positives = 141/309 (45%), Gaps = 4/309 (1%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
+I + R + A++ F + + + + +F T++ + + + L R + G
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMG 561
Query: 147 -APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
PDA Y LI A C +LFD M+ + D A +IH L + R+ +A
Sbjct: 562 LEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS 621
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
+ + E K+E + Y +I G C + L A RI + + + LI+
Sbjct: 622 KFFNNLI-EGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHV 680
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPD 323
L K + A+R+ M E G + N+VT ++ + + + E ++++ + ++ G+ P
Sbjct: 681 LCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPS 740
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
++ Y++ + LCK G+ EA ++FH PDVV Y L G C+ + EA ++ +
Sbjct: 741 IVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYE 800
Query: 384 EMMFKGYAP 392
M+ G P
Sbjct: 801 HMLRNGVKP 809
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 94/190 (49%), Gaps = 2/190 (1%)
Query: 221 VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLE 280
V + LI G CK GE+ AF + M ++G++ D Y+TLI+ FKAG ++
Sbjct: 286 VVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS 345
Query: 281 EMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEG 338
+ G + + V + I Y + + A + + +G+ P+V+ Y + + LC++G
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405
Query: 339 KWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLN 398
+ EA ++ + +RG P +VTY +L DG C+ R + ++M+ GY P
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465
Query: 399 AFVSELCQEG 408
V L ++G
Sbjct: 466 VLVDGLSKQG 475
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 142/354 (40%), Gaps = 16/354 (4%)
Query: 118 SFNTLLHALLTCRQFDAVTE-----LAARAGEFG--------APDACTYNILIRASCLRG 164
SF T+ H L+ FD + + R +F + DA L+ C G
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYG 160
Query: 165 HADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIY 224
D+A E+F GV Q + +++ L + R+ + +++ R V+ +
Sbjct: 161 MVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAH 220
Query: 225 TNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMRE 284
++ + GE++ A ++++G ++ N ++ L + E A R+L + +
Sbjct: 221 GFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLD 279
Query: 285 GGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSE 342
G N VT +I +C+ + A+ + +E G++PD+I Y+ + K G
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339
Query: 343 AMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVS 402
LF +G DVV + + D + A VV M+ +G +P +
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399
Query: 403 ELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
LCQ+G + + +G + + ++ CK + F L + ++
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 195/446 (43%), Gaps = 19/446 (4%)
Query: 12 LSSLLRSQKDPSVA----FQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQV 67
LSSLLRS P + F F +P H SY L+ L +KM+ E +
Sbjct: 78 LSSLLRSDSTPFASPKELFSAFSLSSPSLKHD------FSYLLLSVLLNESKMISEAADL 131
Query: 68 LHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSI--PSFRCQRTLKSFNTLLHA 125
L + + + L ++ + +Q + FL+I FR + + + + A
Sbjct: 132 FFALRNEGIYPSSDSLTL-LLDHLVKTKQFRVTINVFLNILESDFRPSKFM--YGKAIQA 188
Query: 126 LLTCRQFDAVTELAARAG-EFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPD 184
+ EL R + P YN+LI C + A +LFDEM +R + P
Sbjct: 189 AVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPS 248
Query: 185 QATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIK 244
T+ TLI C+ ++F+++E M + +E + + L+KG+ K G + A +
Sbjct: 249 LITYNTLIDGYCKAGNPEKSFKVRERM-KADHIEPSLITFNTLLKGLFKAGMVEDAENVL 307
Query: 245 DEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRE 304
EM G DA ++ L + K E AL V E + G + N+ TC++++ C+E
Sbjct: 308 KEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKE 367
Query: 305 NNFEEAYRIL--DGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTY 362
E+A IL + +G+ P+ + YN + C++G A M ++G PD + Y
Sbjct: 368 GKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAY 427
Query: 363 RTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTS 422
L C + A +++M KG +P + N + ++ F+ +L ++
Sbjct: 428 NCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMED 487
Query: 423 KGKICNEGIWDVVLSMVCKPEKVPES 448
G + N + +++ +CK K+ E+
Sbjct: 488 NGTMPNVVSYGTLINCLCKGSKLLEA 513
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/420 (23%), Positives = 184/420 (43%), Gaps = 44/420 (10%)
Query: 38 HRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCH-VITFYARARQ 96
H S+ Y+++I L + K + + EQ+ ++ R +P + + +I Y +A
Sbjct: 207 HDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEML--ARRLLPSLITYNTLIDGYCKAGN 264
Query: 97 PSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNI 155
P ++ + + + + +L +FNTLL L + + + G PDA T++I
Sbjct: 265 PEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSI 324
Query: 156 LIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREF 215
L A+ A +++ GV+ + T L++ LC+ ++ +A EE+
Sbjct: 325 LFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKA----EEILGRE 380
Query: 216 KLEGCV---TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKK 272
+G V IY +I G C+ G+L A + M K+G+K D YN LI + G+
Sbjct: 381 MAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEM 440
Query: 273 EEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLG 332
E A + + +M+ ++GV P V YN+ +G
Sbjct: 441 ENAEKEVNKMK---------------------------------LKGVSPSVETYNILIG 467
Query: 333 WLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
++ ++ + D+ +M G P+VV+Y TL + LC+ + EA +V +M +G +P
Sbjct: 468 GYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSP 527
Query: 393 LSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+ N + C +G E ++ KG N ++ ++ + K+ E+ +LL
Sbjct: 528 KVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLL 587
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 136/297 (45%), Gaps = 34/297 (11%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
+P TYNILI + D+ F++ EM G P+ ++GTLI+ LC+ S+L EA
Sbjct: 456 SPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQI 515
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
+K +M + + V IY LI G C G++ AFR EM+KKG++L+ YNTLI+ L
Sbjct: 516 VKRDM-EDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGL 574
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENN-------FEE---------- 309
GK EA +L E+ G + + T N +I Y N +EE
Sbjct: 575 SMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTL 634
Query: 310 -AYRIL------DGVE---------GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR 353
Y +L +G+E +KPD++ YN L G +A +L M +
Sbjct: 635 KTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEK 694
Query: 354 GCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNF 410
D TY +L G + + E ++DEM + P + N V C+ ++
Sbjct: 695 SIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDY 751
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 116/273 (42%), Gaps = 41/273 (15%)
Query: 115 TLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELF 173
L ++NTL+ L + +L G PD TYN LI G+ R L+
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALY 622
Query: 174 DEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCK 233
+EM+ G++P T+ LI LC +E EL E +F E L+ + +Y ++
Sbjct: 623 EEMKRSGIKPTLKTYHLLIS-LCT----KEGIELTERLFGEMSLKPDLLVYNGVLHCYAV 677
Query: 234 IGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
G++ AF ++ +M++K + LD YN+LI K GK E +++EM E + T
Sbjct: 678 HGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADT 737
Query: 294 CNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR 353
N+++ +C ++ AY W + +M +
Sbjct: 738 YNIIVKGHCEVKDYMSAYV--------------------W-------------YREMQEK 764
Query: 354 GCAPDVVTYRTLFDGLC-RWRQFREAVVVLDEM 385
G DV L GL WR +EA +V+ EM
Sbjct: 765 GFLLDVCIGNELVSGLKEEWRS-KEAEIVISEM 796
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 115/243 (47%), Gaps = 13/243 (5%)
Query: 44 SLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCH-VITFYARARQPSRAVQ 102
+L++Y+ +I L L E E +L L + + P+ + +I+ Y A R +
Sbjct: 563 NLVTYNTLIDGLSMTGKLSEAEDLL--LEISRKGLKPDVFTYNSLISGYGFAGNVQRCIA 620
Query: 103 TFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARA-GEFG-APDACTYNILIRAS 160
+ + + TLK++ H L++ + + EL R GE PD YN ++
Sbjct: 621 LYEEMKRSGIKPTLKTY----HLLISLCTKEGI-ELTERLFGEMSLKPDLLVYNGVLHCY 675
Query: 161 CLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM-FREFKLEG 219
+ G ++AF L +M + + D+ T+ +LI + +L E L +EM RE + E
Sbjct: 676 AVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEA 735
Query: 220 CVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVL 279
Y ++KG C++ + A+ EM +KG LD + N L++ L + + +EA V+
Sbjct: 736 --DTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVI 793
Query: 280 EEM 282
EM
Sbjct: 794 SEM 796
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 58/137 (42%)
Query: 320 VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAV 379
+ P V YNV + LCK + ++A LF +M R P ++TY TL DG C+ ++
Sbjct: 210 IYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSF 269
Query: 380 VVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMV 439
V + M P N + L + G E VL ++ G + + + ++
Sbjct: 270 KVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGY 329
Query: 440 CKPEKVPESFELLDALV 456
EK + + + V
Sbjct: 330 SSNEKAEAALGVYETAV 346
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 181/402 (45%), Gaps = 8/402 (1%)
Query: 41 FRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRA 100
F HSL SY +++ LG +K + L + + + V Y+RA PS A
Sbjct: 98 FAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEA 157
Query: 101 VQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRA 159
+ F + F + + + LLH+L + + E +A FG P A TY+IL+R
Sbjct: 158 CRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRG 217
Query: 160 SCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEG 219
A A ++FDEM R D + L+ LC++ + +++ +EM L+
Sbjct: 218 WARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEM-GNLGLKP 276
Query: 220 CVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVL 279
+ I C G++ A+++ D M + L + +N +I L K K ++A +L
Sbjct: 277 DAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLL 336
Query: 280 EEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVK--PDVIGYNVFLGWLCKE 337
+EM + G ++ T N ++ +C A ++L ++ K PD YN+ L L +
Sbjct: 337 DEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRI 396
Query: 338 GKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWR-QFREAVVVLDEMMFKGYAPLSKN 396
G++ A +++ M R P V TY + GL R + + EA + M+ +G P S
Sbjct: 397 GRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTT 456
Query: 397 LNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSM 438
+ + L G +++ VL+ + C+ + D+ + M
Sbjct: 457 VEMLRNRLVGWGQMDVVD-VLAGKMERSSSCS--VQDMAVEM 495
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/407 (23%), Positives = 180/407 (44%), Gaps = 36/407 (8%)
Query: 75 TRHRVPEPLLCHVITFYARARQPSRAVQTFLS------------------IPSFRCQRTL 116
+ HR P+ L H + Y+ R S V+ L IP F +L
Sbjct: 46 SDHRNPKDDLEHTLVAYS-PRVSSNLVEQVLKRCKNLGFPAHRFFLWARRIPDF--AHSL 102
Query: 117 KSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACT--YNILIRASCLRGHADRAFELFD 174
+S++ L+ L + +QF + + A E+ + + + I+ RA A F+
Sbjct: 103 ESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFN 162
Query: 175 EMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCV---TIYTNLIKGV 231
M G++P L+H LC+ + A +E F + K G V Y+ L++G
Sbjct: 163 RMVEFGIKPCVDDLDQLLHSLCDKKHVNHA----QEFFGKAKGFGIVPSAKTYSILVRGW 218
Query: 232 CKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNS 291
+I + S A ++ DEM+++ +D YN L++AL K+G + ++ +EM G + ++
Sbjct: 219 ARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDA 278
Query: 292 VTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHD 349
+ + I YC + AY++LD ++ + P+V +N + LCK K +A L +
Sbjct: 279 YSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDE 338
Query: 350 MPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGN 409
M ++G PD TY ++ C + A +L M P N + L + G
Sbjct: 339 MIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGR 398
Query: 410 FELLSTVLSDLTSKGKICNEGIWDVVL-SMVCKPEKVPES---FELL 452
F+ + + ++ + + V++ +V K K+ E+ FE++
Sbjct: 399 FDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMM 445
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 160/372 (43%), Gaps = 10/372 (2%)
Query: 92 ARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDA 150
A+ + + F + L SF TL+ C + + + G P
Sbjct: 90 AKLNKYEAVISLFRHLEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSI 149
Query: 151 CTYNILIRASCLRGHADRAFE---LFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
T+ L+ C H +R +E L D++ G P+ + T+I LCE ++ A ++
Sbjct: 150 VTFGSLVNGFC---HVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDV 206
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+ M ++ + V Y +LI + G + RI +M++ G+ D ++ LI+
Sbjct: 207 LKHM-KKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYG 265
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVI 325
K G+ EA + EM + N VT N +I C +EA ++L+ + +G P+ +
Sbjct: 266 KEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAV 325
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
YN + CK + + M + M R G D TY TL+ G C+ +F A VL M
Sbjct: 326 TYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKV 445
+ G P N + LC G L DL + +++++ +CK +KV
Sbjct: 386 VSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKV 445
Query: 446 PESFELLDALVL 457
+++ L +L L
Sbjct: 446 EDAWYLFCSLAL 457
Score = 128 bits (322), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 142/311 (45%), Gaps = 11/311 (3%)
Query: 85 CHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGE 144
CHV FY A+ I + + +NT++ +L Q + ++ +
Sbjct: 160 CHVNRFY-------EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKK 212
Query: 145 FGA-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLRE 203
G PD TYN LI G + + +M G+ PD TF LI + +L E
Sbjct: 213 MGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLE 272
Query: 204 AFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLI 263
A + EM + VT Y +LI G+C G L A ++ + +V KG +A YNTLI
Sbjct: 273 AKKQYNEMIQRSVNPNIVT-YNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLI 331
Query: 264 NALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVK 321
N KA + ++ +++L M G + ++ T N + YC+ F A ++L + GV
Sbjct: 332 NGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVH 391
Query: 322 PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVV 381
PD+ +N+ L LC GK +A+ D+ + ++TY + GLC+ + +A +
Sbjct: 392 PDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYL 451
Query: 382 LDEMMFKGYAP 392
+ KG +P
Sbjct: 452 FCSLALKGVSP 462
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 134/291 (46%), Gaps = 9/291 (3%)
Query: 167 DRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC---VTI 223
+ A LF +M P F L+ + + ++ +E +FR ++ G +
Sbjct: 61 NDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNK----YEAVISLFRHLEMLGISHDLYS 116
Query: 224 YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMR 283
+T LI C+ LS A +M+K G + + +L+N + EA+ +++++
Sbjct: 117 FTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIV 176
Query: 284 EGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWS 341
G E N V N +I C + A +L ++ G++PDV+ YN + L G W
Sbjct: 177 GLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWG 236
Query: 342 EAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFV 401
+ + DM R G +PDV+T+ L D + Q EA +EM+ + P N+ +
Sbjct: 237 VSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLI 296
Query: 402 SELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+ LC G + VL+ L SKG N ++ +++ CK ++V + ++L
Sbjct: 297 NGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKIL 347
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 109/207 (52%), Gaps = 3/207 (1%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P+ TYN LI C+ G D A ++ + + S+G P+ T+ TLI+ C+ R+ + ++
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
M R+ ++G Y L +G C+ G+ S A ++ MV G+ D +N L++ L
Sbjct: 347 LCVMSRD-GVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLC 405
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRIL--DGVEGVKPDVI 325
GK +AL LE++++ +T N++I C+ + E+A+ + ++GV PDVI
Sbjct: 406 DHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVI 465
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPR 352
Y + L ++ W EA +L+ M +
Sbjct: 466 TYITMMIGLRRKRLWREAHELYRKMQK 492
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 132 bits (333), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/498 (23%), Positives = 206/498 (41%), Gaps = 62/498 (12%)
Query: 14 SLLRSQKDPSVAFQLFLNPNPQTNHRPF-RHSLLSYDLIITKLGRAKMLPEMEQVLHQLH 72
SL PS+++ F+ T+ P +HSL S +I L + K Q+L +L
Sbjct: 52 SLFSGYGGPSLSWSFFI----WTDSLPSSKHSLQSSWKMILILTKHKHFKTAHQLLDKLA 107
Query: 73 LDTRHRVPEPLL---------------CHVIT----FYARARQPSRAVQTFLSIPSFRCQ 113
R + PL+ HV + +YA+A + ++ F I S +
Sbjct: 108 --QRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYAKAGMINDSIVVFEQIRSCGLK 165
Query: 114 RTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFEL 172
L++ LL++L+ R D V ++ + + G + YN+L+ A G ++A +L
Sbjct: 166 PHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKL 225
Query: 173 FDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM--------------------- 211
EM +GV PD T+ TLI C+ S EA +++ M
Sbjct: 226 LSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSR 285
Query: 212 ----------FREFK--LEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALY 259
FRE K + YT LI G C++ ++ A R+++ M +G Y
Sbjct: 286 EGRMREATRLFREIKDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTY 345
Query: 260 NTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV-- 317
N+++ L + G+ EA R+L EM E +++TCN +I YC+ + A ++ +
Sbjct: 346 NSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIE 405
Query: 318 EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFRE 377
G+K D+ Y + CK + A + M +G +P TY L DG + E
Sbjct: 406 SGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDE 465
Query: 378 AVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLS 437
+L+E +G + +C+ + + + KG + + I+ +
Sbjct: 466 ITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAY 525
Query: 438 MVCKPEKVPESFELLDAL 455
+ KV E+ L D +
Sbjct: 526 AYWRTGKVTEASALFDVM 543
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 130/242 (53%), Gaps = 7/242 (2%)
Query: 217 LEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEAL 276
L+ C + +L+K ++ + W +I +MVK G+ + +YN L++A K+G E+A
Sbjct: 168 LQACTVLLNSLVKQ--RLTDTVW--KIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAE 223
Query: 277 RVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWL 334
++L EM E G + T N +I YC+++ EA + D +E GV P+++ YN F+
Sbjct: 224 KLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGF 283
Query: 335 CKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLS 394
+EG+ EA LF ++ + + VTY TL DG CR EA+ + + M +G++P
Sbjct: 284 SREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGV 342
Query: 395 KNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDA 454
N+ + +LC++G + +L++++ K + + +++ CK E + + ++
Sbjct: 343 VTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKK 402
Query: 455 LV 456
++
Sbjct: 403 MI 404
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/226 (22%), Positives = 102/226 (45%), Gaps = 5/226 (2%)
Query: 39 RPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCH-VITFYARARQP 97
R F +++Y+ I+ KL + E ++L ++ + P+ + C+ +I Y +
Sbjct: 336 RGFSPGVVTYNSILRKLCEDGRIREANRLLTEM--SGKKIEPDNITCNTLINAYCKIEDM 393
Query: 98 SRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQF-DAVTELAARAGEFGAPDACTYNIL 156
AV+ + + + S+ L+H + +A EL + + +P TY+ L
Sbjct: 394 VSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWL 453
Query: 157 IRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFK 216
+ + D +L +E RG+ D A + LI R+C+ ++ A L E M ++
Sbjct: 454 VDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKK-G 512
Query: 217 LEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTL 262
L G I+T + + G+++ A + D M + L ++ LY ++
Sbjct: 513 LVGDSVIFTTMAYAYWRTGKVTEASALFDVMYNRRLMVNLKLYKSI 558
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 131 bits (330), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 163/363 (44%), Gaps = 4/363 (1%)
Query: 96 QPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDA-CTYN 154
Q + A+ F + R ++ F LL + ++D V L + G P CT N
Sbjct: 63 QFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCN 122
Query: 155 ILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFRE 214
I++ CL RA +M G PD TF +L++ C +R+ +A L +++
Sbjct: 123 IVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL-G 181
Query: 215 FKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEE 274
+ V YT LI+ +CK L+ A + ++M G + + YN L+ L + G+ +
Sbjct: 182 MGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGD 241
Query: 275 ALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLG 332
A +L +M + E N +T +I + + EA + + + V PDV Y +
Sbjct: 242 AAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301
Query: 333 WLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
LC G EA +F+ M R GC P+ V Y TL G C+ ++ + + + EM KG
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361
Query: 393 LSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+ + C G ++ V + ++S+ + ++V+L +C KV ++ +
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421
Query: 453 DAL 455
+ +
Sbjct: 422 EYM 424
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/345 (26%), Positives = 154/345 (44%), Gaps = 4/345 (1%)
Query: 91 YARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PD 149
Y + A+ F I + + ++ TL+ L R + EL + G G+ P+
Sbjct: 163 YCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPN 222
Query: 150 ACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKE 209
TYN L+ C G A L +M R + P+ TF LI + +L EA EL
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN 282
Query: 210 EMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKA 269
M + + V Y +LI G+C G L A ++ M + G + +Y TLI+ K+
Sbjct: 283 VMI-QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKS 341
Query: 270 GKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVK--PDVIGY 327
+ E+ +++ EM + G N++T V+I YC + A + + + + PD+ Y
Sbjct: 342 KRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTY 401
Query: 328 NVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMF 387
NV L LC GK +A+ +F M +R ++VTY + G+C+ + +A + +
Sbjct: 402 NVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFS 461
Query: 388 KGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIW 432
KG P +S C+ G ++ + G + NE ++
Sbjct: 462 KGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 155/354 (43%), Gaps = 9/354 (2%)
Query: 105 LSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLR 163
L IP C + N ++H + Q + + + G PD T+ L+ C
Sbjct: 112 LGIPPLLC-----TCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHW 166
Query: 164 GHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTI 223
+ A LFD++ G +P+ T+ TLI LC+N L A EL +M VT
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVT- 225
Query: 224 YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMR 283
Y L+ G+C+IG A + +M+K+ ++ + + LI+A K GK EA + M
Sbjct: 226 YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285
Query: 284 EGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWS 341
+ + T +I C +EA ++ +E G P+ + Y + CK +
Sbjct: 286 QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVE 345
Query: 342 EAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFV 401
+ M +F++M ++G + +TY L G C + A V ++M + P + N +
Sbjct: 346 DGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 402 SELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
LC G E + + + N + +++ +CK KV ++F+L +L
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSL 459
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 123/256 (48%), Gaps = 4/256 (1%)
Query: 111 RCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRA 169
R + + +F L+ A + + EL + PD TY LI C+ G D A
Sbjct: 253 RIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEA 312
Query: 170 FELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIK 229
++F M G P++ + TLIH C++ R+ + ++ EM ++ + +T YT LI+
Sbjct: 313 RQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTIT-YTVLIQ 371
Query: 230 GVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEW 289
G C +G A + ++M + D YN L++ L GK E+AL + E MR+ +
Sbjct: 372 GYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDI 431
Query: 290 NSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLF 347
N VT ++I C+ E+A+ + + +G+KP+VI Y + C+ G EA LF
Sbjct: 432 NIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLF 491
Query: 348 HDMPRRGCAPDVVTYR 363
M G P+ Y+
Sbjct: 492 KKMKEDGFLPNESVYK 507
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 133/340 (39%), Gaps = 35/340 (10%)
Query: 114 RTLKSFNTLLHALLTCRQFDAVTELAAR-AGEFGAPDACTYNILIRASCLRGHADRAFEL 172
R S+ +L L QF+ +L R P + L+ D L
Sbjct: 46 RAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISL 105
Query: 173 FDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVC 232
F++M+ G+ P T ++H +C +S+ A +M + E + +T+L+ G C
Sbjct: 106 FEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMK-LGFEPDLVTFTSLLNGYC 164
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
+ A + D+++ G K + Y TLI L K A+ + +M
Sbjct: 165 HWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQM---------- 214
Query: 293 TCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPR 352
G G +P+V+ YN + LC+ G+W +A L DM +
Sbjct: 215 -----------------------GTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMK 251
Query: 353 RGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFEL 412
R P+V+T+ L D + + EA + + M+ P + ++ LC G +
Sbjct: 252 RRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDE 311
Query: 413 LSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+ + G NE I+ ++ CK ++V + ++
Sbjct: 312 ARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIF 351
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 92/200 (46%), Gaps = 2/200 (1%)
Query: 259 YNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE 318
+ L++ + K + + + + E+M+ G TCN+++ C + A L +
Sbjct: 86 FTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMM 145
Query: 319 --GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFR 376
G +PD++ + L C + +A+ LF + G P+VVTY TL LC+ R
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLN 205
Query: 377 EAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVL 436
AV + ++M G P NA V+ LC+ G + + +L D+ + N + ++
Sbjct: 206 HAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALI 265
Query: 437 SMVCKPEKVPESFELLDALV 456
K K+ E+ EL + ++
Sbjct: 266 DAFVKVGKLMEAKELYNVMI 285
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/461 (22%), Positives = 188/461 (40%), Gaps = 47/461 (10%)
Query: 39 RPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPS 98
R FR ++S + ++ L ++ E+ L L LD C +I + + +
Sbjct: 246 RGFRVGIVSCNKVLKGLSVDQI--EVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMD 303
Query: 99 RAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAP-DACTYNILI 157
RA F + + L +++TL+ +L ++A G D ++ I
Sbjct: 304 RAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTI 363
Query: 158 RASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKL 217
G A ++ M +G+ P+ T+ LI LC++ R+ EAF + ++ + +
Sbjct: 364 DVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR-GM 422
Query: 218 EGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALR 277
E + Y++LI G CK G L F + ++M+K G D +Y L++ L K G A+R
Sbjct: 423 EPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMR 482
Query: 278 VLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRI--LDGVEGVKPDVIGYNVFL---- 331
+M N V N +I +CR N F+EA ++ L G+ G+KPDV + +
Sbjct: 483 FSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSI 542
Query: 332 --GWLCKEGKWSEAMDLFHDMPRRGCA--------------------------------- 356
CK K + + LF M R +
Sbjct: 543 MEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 602
Query: 357 --PDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLS 414
PD+VTY T+ G C R+ EA + + + + P + L + LC+ + +
Sbjct: 603 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 662
Query: 415 TVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
+ S + KG N + ++ K + SF+L + +
Sbjct: 663 RMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 703
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 130/283 (45%), Gaps = 10/283 (3%)
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRAS------CLRGHADRAFE 171
FN+L+ +FD ++ G +G PD T+ ++R S C +
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQ 558
Query: 172 LFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGV 231
LFD M+ + D A +IH L + R+ +A + + E K+E + Y +I G
Sbjct: 559 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLI-EGKMEPDIVTYNTMICGY 617
Query: 232 CKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNS 291
C + L A RI + + + LI+ L K + A+R+ M E G + N+
Sbjct: 618 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 677
Query: 292 VTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHD 349
VT ++ + + + E ++++ + ++ G+ P ++ Y++ + LCK G+ EA ++FH
Sbjct: 678 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 737
Query: 350 MPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
PDVV Y L G C+ + EA ++ + M+ G P
Sbjct: 738 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 780
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/474 (21%), Positives = 179/474 (37%), Gaps = 62/474 (13%)
Query: 25 AFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQ-LHLDTRHRVPEPL 83
AF LF R L++Y +I +A ML ++ Q LH + V +
Sbjct: 305 AFDLF----KVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVV--V 358
Query: 84 LCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQ------FDAVTE 137
I Y ++ + A + + + ++ L+ L C+ F +
Sbjct: 359 FSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL--CQDGRIYEAFGMYGQ 416
Query: 138 LAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCE 197
+ R E P TY+ LI C G+ F L+++M G PD +G L+ L +
Sbjct: 417 ILKRGME---PSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSK 473
Query: 198 NSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAA 257
+ A +M + + V ++ +LI G C++ A ++ M G+K D A
Sbjct: 474 QGLMLHAMRFSVKMLGQ-SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 258 LY-----------------------------------------NTLINALFKAGKKEEAL 276
+ N +I+ LFK + E+A
Sbjct: 533 TFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS 592
Query: 277 RVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILD--GVEGVKPDVIGYNVFLGWL 334
+ + EG E + VT N MI YC +EA RI + V P+ + + + L
Sbjct: 593 KFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 652
Query: 335 CKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLS 394
CK A+ +F M +G P+ VTY L D + + + +EM KG +P
Sbjct: 653 CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSI 712
Query: 395 KNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPES 448
+ + + LC+ G + + + + + + +++ CK ++ E+
Sbjct: 713 VSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEA 766
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 142/354 (40%), Gaps = 16/354 (4%)
Query: 118 SFNTLLHALLTCRQFDAVTE-----LAARAGEFG--------APDACTYNILIRASCLRG 164
SF T+ H L+ FD + + R +F + DA L+ C G
Sbjct: 101 SFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYG 160
Query: 165 HADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIY 224
D+A E+F GV Q + +++ L + R+ + +++ R V+ +
Sbjct: 161 MVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAH 220
Query: 225 TNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMRE 284
++ + GE++ A ++++G ++ N ++ L + E A R+L + +
Sbjct: 221 GFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLD 279
Query: 285 GGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSE 342
G N VT +I +C+ + A+ + +E G++PD+I Y+ + K G
Sbjct: 280 CGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGM 339
Query: 343 AMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVS 402
LF +G DVV + + D + A VV M+ +G +P +
Sbjct: 340 GHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIK 399
Query: 403 ELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
LCQ+G + + +G + + ++ CK + F L + ++
Sbjct: 400 GLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 156/341 (45%), Gaps = 4/341 (1%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEM 176
+ N+LL+ + L + E G PD T+ LI L A A L D M
Sbjct: 150 TLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRM 209
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
RG +PD T+G +++ LC+ A L +M K+E V IY+ +I +CK
Sbjct: 210 VQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM-EAAKIEANVVIYSTVIDSLCKYRH 268
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
A + EM KG++ + Y++LI+ L G+ +A R+L +M E N VT +
Sbjct: 269 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSA 328
Query: 297 MIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
+I + ++ +A ++ + + + P++ Y+ + C + EA + M R+
Sbjct: 329 LIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKD 388
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLS 414
C P+VVTY TL +G C+ ++ + + + EM +G + + Q + +
Sbjct: 389 CLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 448
Query: 415 TVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
V + S G N ++++L +CK K+ ++ + + L
Sbjct: 449 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 489
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 159/341 (46%), Gaps = 4/341 (1%)
Query: 115 TLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELF 173
++ F+ LL A+ +FD V + G + + TYNILI C A L
Sbjct: 77 SIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALL 136
Query: 174 DEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCK 233
+M G PD T +L++ C +R+ +A L ++M E + +T LI G+
Sbjct: 137 GKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV-EMGYKPDTVTFTTLIHGLFL 195
Query: 234 IGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
+ S A + D MV++G + D Y ++N L K G + AL +L +M E N V
Sbjct: 196 HNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVI 255
Query: 294 CNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
+ +I C+ + ++A + +E GV+P+VI Y+ + LC G+WS+A L DM
Sbjct: 256 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI 315
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
R P++VT+ L D + + +A + +EM+ + P ++ ++ C
Sbjct: 316 ERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLG 375
Query: 412 LLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+L + K + N ++ +++ CK ++V + EL
Sbjct: 376 EAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELF 416
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 153/330 (46%), Gaps = 4/330 (1%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEM 176
+F TL+H L + L R + G PD TY ++ C RG D A L ++M
Sbjct: 185 TFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM 244
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
+ + + + T+I LC+ +A L EM + +T Y++LI +C G
Sbjct: 245 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT-YSSLISCLCNYGR 303
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
S A R+ +M+++ + + ++ LI+A K GK +A ++ EEM + + N T +
Sbjct: 304 WSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSS 363
Query: 297 MIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
+I +C + EA ++L+ + + P+V+ YN + CK + + M+LF +M +RG
Sbjct: 364 LINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG 423
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLS 414
+ VTY TL G + R A +V +M+ G P N + LC+ G
Sbjct: 424 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 483
Query: 415 TVLSDLTSKGKICNEGIWDVVLSMVCKPEK 444
V L + +++++ +CK K
Sbjct: 484 VVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 135/324 (41%), Gaps = 34/324 (10%)
Query: 133 DAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLI 192
DA+ A P ++ L+ A D ++M G+ + T+ LI
Sbjct: 61 DAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNILI 120
Query: 193 HRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGL 252
+ C SRL A L +M + E + +L+ G C +S A + D+MV+ G
Sbjct: 121 NCFCRCSRLSLALALLGKMMK-LGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179
Query: 253 KLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYR 312
K D + TLI+ LF K EA+ +++ M + GC+
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQ------------------------ 215
Query: 313 ILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRW 372
PD++ Y + LCK G A++L + M +VV Y T+ D LC++
Sbjct: 216 ---------PDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKY 266
Query: 373 RQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIW 432
R +A+ + EM KG P ++ +S LC G + S +LSD+ + N +
Sbjct: 267 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTF 326
Query: 433 DVVLSMVCKPEKVPESFELLDALV 456
++ K K+ ++ +L + ++
Sbjct: 327 SALIDAFVKKGKLVKAEKLYEEMI 350
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 152/310 (49%), Gaps = 6/310 (1%)
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMR 177
F L+ + E+ ++G PD + L+ A C G A ++F++MR
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR 229
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGEL 237
+ P+ F +L++ C +L EA E+ +M +E LE + ++TNL+ G G++
Sbjct: 230 EK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQM-KEAGLEPDIVVFTNLLSGYAHAGKM 287
Query: 238 SWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKK-EEALRVLEEMREGGCEWNSVTCNV 296
+ A+ + ++M K+G + + Y LI AL + K+ +EA+RV EM GCE + VT
Sbjct: 288 ADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTA 347
Query: 297 MIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
+I +C+ ++ Y +LD + +GV P + Y + K+ ++ E ++L M RRG
Sbjct: 348 LISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRG 407
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLS 414
C PD++ Y + C+ + +EAV + +EM G +P ++ +G
Sbjct: 408 CHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEAC 467
Query: 415 TVLSDLTSKG 424
++ S+G
Sbjct: 468 NHFKEMVSRG 477
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 150/311 (48%), Gaps = 11/311 (3%)
Query: 121 TLLHALLTCRQFDAV----TELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEM 176
+++ L RQF AV E+ E P+ + +L+R +A E+ DEM
Sbjct: 136 SMVMILSKMRQFGAVWGLIEEMRKTNPELIEPE--LFVVLMRRFASANMVKKAVEVLDEM 193
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
G+ PD+ FG L+ LC+N ++EA ++ E+M +F + +T+L+ G C+ G+
Sbjct: 194 PKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPN--LRYFTSLLYGWCREGK 251
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
L A + +M + GL+ D ++ L++ AGK +A ++ +MR+ G E N V
Sbjct: 252 LMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTV 311
Query: 297 MIGEYCR-ENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR 353
+I CR E +EA R+ +E G + D++ Y + CK G + + DM ++
Sbjct: 312 LIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKK 371
Query: 354 GCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELL 413
G P VTY + + QF E + ++++M +G P N + C+ G +
Sbjct: 372 GVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEA 431
Query: 414 STVLSDLTSKG 424
+ +++ + G
Sbjct: 432 VRLWNEMEANG 442
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/263 (28%), Positives = 124/263 (47%), Gaps = 7/263 (2%)
Query: 115 TLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELF 173
L+ F +LL+ + E+ + E G PD + L+ G A++L
Sbjct: 235 NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLM 294
Query: 174 DEMRSRGVRPDQATFGTLIHRLCEN-SRLREAFELKEEMFREFKLEGCVTIYTNLIKGVC 232
++MR RG P+ + LI LC R+ EA + EM R + E + YT LI G C
Sbjct: 295 NDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMER-YGCEADIVTYTALISGFC 353
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
K G + + + D+M KKG+ Y ++ A K + EE L ++E+M+ GC + +
Sbjct: 354 KWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLL 413
Query: 293 TCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM 350
NV+I C+ +EA R+ + +E G+ P V + + + +G EA + F +M
Sbjct: 414 IYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEM 473
Query: 351 PRRG--CAPDVVTYRTLFDGLCR 371
RG AP T ++L + L R
Sbjct: 474 VSRGIFSAPQYGTLKSLLNNLVR 496
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 111/219 (50%), Gaps = 4/219 (1%)
Query: 240 AFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIG 299
A + DEM K GL+ D ++ L++AL K G +EA +V E+MRE +++ G
Sbjct: 186 AVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPPNLRYFTSLLYG 245
Query: 300 EYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAP 357
+CRE EA +L ++ G++PD++ + L GK ++A DL +DM +RG P
Sbjct: 246 -WCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEP 304
Query: 358 DVVTYRTLFDGLCRW-RQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTV 416
+V Y L LCR ++ EA+ V EM G A +S C+ G + +V
Sbjct: 305 NVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSV 364
Query: 417 LSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
L D+ KG + ++ + ++ K E+ E EL++ +
Sbjct: 365 LDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKM 403
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 137/297 (46%), Gaps = 9/297 (3%)
Query: 130 RQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFG 189
+ D +T L + P+ Y I I C + A ++F+ M+ GV P+ T+
Sbjct: 220 KLLDEMTSLGIK------PNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYS 273
Query: 190 TLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVK 249
+I C+ +R+A+ L +E+ +L V ++ L+ G CK EL A + MVK
Sbjct: 274 AMIDGYCKTGNVRQAYGLYKEILVA-ELLPNVVVFGTLVDGFCKARELVTARSLFVHMVK 332
Query: 250 KGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEE 309
G+ + +YN LI+ K+G EA+ +L EM + T ++I C E+ E
Sbjct: 333 FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAE 392
Query: 310 AYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFD 367
A R+ + E + P YN + CKE +A+DL +M G P+++T+ TL D
Sbjct: 393 ANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLID 452
Query: 368 GLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
G C R + A+ + EM KG P A + +E N + + SD+ G
Sbjct: 453 GYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAG 509
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 154/354 (43%), Gaps = 23/354 (6%)
Query: 83 LLCHVITF------YARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQ---FD 133
LL +V+ F + +AR+ A F+ + F L +N L+H C+ +
Sbjct: 300 LLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHG--HCKSGNMLE 357
Query: 134 AVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIH 193
AV L+ +PD TY ILI C+ A LF +M++ + P AT+ +LIH
Sbjct: 358 AVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIH 417
Query: 194 RLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLK 253
C+ + +A +L EM +E + ++ LI G C + ++ A + EM KG+
Sbjct: 418 GYCKEYNMEQALDLCSEMTAS-GVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIV 476
Query: 254 LDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRI 313
D Y LI+A FK +EALR+ +M E G N T ++ + +E A
Sbjct: 477 PDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDF 536
Query: 314 LDGVEGVKP--DVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCR 371
+ + +G+ + LC+ G A F DM G PD+ +Y ++ G +
Sbjct: 537 YQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQ 596
Query: 372 WRQFREAVVVLDEMMFKGYAP--LSKNL-------NAFVSELCQEGNFELLSTV 416
++ + +++ +M+ G P L L N +V C N L TV
Sbjct: 597 EKRITDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSACFLTNSSRLKTV 650
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 157/354 (44%), Gaps = 10/354 (2%)
Query: 111 RCQRTLKSFNTLLHALLTCRQFDAV-TELAARAGEFGAPDACTYNILIRASCLRGHADRA 169
+C K+ ++L+ L+ R+FD+V + PD Y +L + +G +
Sbjct: 159 KCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKK 218
Query: 170 FELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCV---TIYTN 226
+L DEM S G++P+ + I LC ++++ EA E+MF K G + Y+
Sbjct: 219 EKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEA----EKMFELMKKHGVLPNLYTYSA 274
Query: 227 LIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGG 286
+I G CK G + A+ + E++ L + ++ TL++ KA + A + M + G
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFG 334
Query: 287 CEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVK--PDVIGYNVFLGWLCKEGKWSEAM 344
+ N N +I +C+ N EA +L +E + PDV Y + + LC E + +EA
Sbjct: 335 VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEAN 394
Query: 345 DLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSEL 404
LF M P TY +L G C+ +A+ + EM G P + +
Sbjct: 395 RLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGY 454
Query: 405 CQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALVLA 458
C + + + ++T KG + + + ++ K + E+ L ++ A
Sbjct: 455 CNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEA 508
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/371 (21%), Positives = 153/371 (41%), Gaps = 28/371 (7%)
Query: 93 RARQPSRAVQTFLSIPSFRCQRT--LKSFNTLLHALLTCRQFDA----VTELAARAGEFG 146
+ R A + F + R ++ L+SF+ ++H L ++ + L R
Sbjct: 50 KCRSAEEAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHS 109
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
P ++ R F ++++S + F LI E EA
Sbjct: 110 EPSNMSH--------------RLFNALEDIQSP--KFSIGVFSLLIMEFLEMGLFEEALW 153
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
+ EM + C++I + G+ + + M+ +GL D +Y L
Sbjct: 154 VSREMKCSPDSKACLSI----LNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCC 209
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDV 324
FK G + ++L+EM G + N + I + CR+N EEA ++ + ++ GV P++
Sbjct: 210 FKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNL 269
Query: 325 IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDE 384
Y+ + CK G +A L+ ++ P+VV + TL DG C+ R+ A +
Sbjct: 270 YTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVH 329
Query: 385 MMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEK 444
M+ G P N + C+ GN +LS++ S + + ++++ +C ++
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Query: 445 VPESFELLDAL 455
V E+ L +
Sbjct: 390 VAEANRLFQKM 400
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/354 (28%), Positives = 156/354 (44%), Gaps = 14/354 (3%)
Query: 7 ISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQ 66
+ R S + +A++ F+ Q N FRH+ Y L++ M +
Sbjct: 117 VGILRTLSFDNKTRCAKLAYKFFVWCGGQEN---FRHTANCYHLLMKIFAECGEYKAMCR 173
Query: 67 VLHQLHLD---TRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLL 123
++ ++ D T L+C A V+ F+ +F + S+N +L
Sbjct: 174 LIDEMIKDGYPTTACTFNLLICTC----GEAGLARDVVEQFIKSKTFNYRPYKHSYNAIL 229
Query: 124 HALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVR 182
H+LL +Q+ + + + E G PD TYNI++ A+ G DR + L DEM G
Sbjct: 230 HSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFS 289
Query: 183 PDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFR 242
PD T+ L+H L ++ A L M RE +E V +T LI G+ + G+L
Sbjct: 290 PDLYTYNILLHHLATGNKPLAALNLLNHM-REVGVEPGVIHFTTLIDGLSRAGKLEACKY 348
Query: 243 IKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYC 302
DE VK G D Y +I G+ E+A + +EM E G N T N MI +C
Sbjct: 349 FMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFC 408
Query: 303 RENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
F+EA +L +E G P+ + Y+ + L GK EA ++ DM +G
Sbjct: 409 MAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKG 462
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/336 (26%), Positives = 149/336 (44%), Gaps = 22/336 (6%)
Query: 113 QRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPD-ACTYNILIRASCLRGHADRAFE 171
+ T ++ L+ C ++ A+ L + G P ACT+N+LI G A E
Sbjct: 149 RHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVE 208
Query: 172 LFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGV 231
F + ++ RP + ++ ++H L + + + E+M + +T Y ++
Sbjct: 209 QFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLT-YNIVMFAN 267
Query: 232 CKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNS 291
++G+ +R+ DEMVK G D YN L++ L K AL +L MRE G E
Sbjct: 268 FRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGV 327
Query: 292 VTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHD 349
+ +I R E +D G PDV+ Y V + G+ +A ++F +
Sbjct: 328 IHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKE 387
Query: 350 MPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGN 409
M +G P+V TY ++ G C +F+EA +L EM +G P N
Sbjct: 388 MTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNP----------------N 431
Query: 410 FELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKV 445
F + ST++++L + GK+ +VV MV K V
Sbjct: 432 FVVYSTLVNNLKNAGKVLEA--HEVVKDMVEKGHYV 465
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 122/505 (24%), Positives = 207/505 (40%), Gaps = 60/505 (11%)
Query: 5 KPISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEM 64
+ IS + LR K P+ + F +++ F H S+ L++ LGRA+ L
Sbjct: 64 QTISRTTVLQTLRLIKVPADGLRFF----DWVSNKGFSHKEQSFFLMLEFLGRARNLNVA 119
Query: 65 EQVLHQLHLDTRH--RVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTL 122
L + + ++ + +I Y A +V+ F ++ ++ +FN+L
Sbjct: 120 RNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSL 179
Query: 123 LHALL----TCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRS 178
L LL T D E+ G PD+ T+N LI C D AF +F +M
Sbjct: 180 LSILLKRGRTGMAHDLFDEMRRTYGV--TPDSYTFNTLINGFCKNSMVDEAFRIFKDMEL 237
Query: 179 RGVRPDQATFGTLIHRLCENSRLREAFELKEEMFRE-FKLEGCVTIYTNLIKGVCKIGEL 237
PD T+ T+I LC +++ A + M ++ + V YT L++G C E+
Sbjct: 238 YHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEI 297
Query: 238 SWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEE----------------------- 274
A + +M+ +GLK +A YNTLI L +A + +E
Sbjct: 298 DEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFN 357
Query: 275 --------------ALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA---------Y 311
A++V +EM +S + +V+I C N F+ A
Sbjct: 358 ILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEK 417
Query: 312 RILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCR 371
+L G + KP YN +LC GK +A +F + +RG D +Y+TL G CR
Sbjct: 418 EVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG-VQDPPSYKTLITGHCR 476
Query: 372 WRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGI 431
+F+ A +L M+ + + P + + L + G L L + +
Sbjct: 477 EGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATT 536
Query: 432 WDVVLSMVCKPEKVPESFELLDALV 456
+ VL+ + K + ESF L+ ++
Sbjct: 537 FHSVLAELAKRKFANESFCLVTLML 561
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/390 (20%), Positives = 154/390 (39%), Gaps = 60/390 (15%)
Query: 39 RPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHV-ITFYARARQP 97
R + + ++Y+ +I L A E++ +L + P+ ++ I + A
Sbjct: 310 RGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHL 369
Query: 98 SRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAV----TELAARAGEFGA----PD 149
A++ F + + + S++ L+ L +FD EL + G P
Sbjct: 370 DAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPL 429
Query: 150 ACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKE 209
A YN + C G +A ++F ++ RGV+ D ++ TLI C + + A+EL
Sbjct: 430 AAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLV 488
Query: 210 EMFR-EFKLEGCVTIYTNLIKGVCKIGELSWA---------------------------- 240
M R EF + + Y LI G+ KIGE A
Sbjct: 489 LMLRREFVPD--LETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAK 546
Query: 241 -------FRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
F + M++K ++ + L ++ LF + +KE+A ++ + + G V
Sbjct: 547 RKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGY---LVK 603
Query: 294 CNVMIGEYCRENNFEEAYRI----LDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHD 349
++G C +A+ + L+ + V D+ N + LCK + SEA L+++
Sbjct: 604 MEELLGYLCENRKLLDAHTLVLFCLEKSQMV--DIDTCNTVIEGLCKHKRHSEAFSLYNE 661
Query: 350 MPRRGCAPDV---VTYRTLFDGLCRWRQFR 376
+ G + V R + +W + +
Sbjct: 662 LVELGNHQQLSCHVVLRNALEAAGKWEELQ 691
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 163/330 (49%), Gaps = 15/330 (4%)
Query: 1 MATPK-PI-SPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRA 58
++ PK PI SP R+ L+ SQ DP +A ++F + Q N FRHS S+ ++I KLGR
Sbjct: 41 VSNPKSPIGSPTRVQKLIASQSDPLLAKEIFDYASQQPN---FRHSRSSHLILILKLGRG 97
Query: 59 KMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKS 118
+ ++ VL + H + + + + ++I YA A+ P + + TF + F K
Sbjct: 98 RYFNLIDDVLAK-HRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKH 156
Query: 119 FNTLLHALLTCRQF-DAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEM 176
N +L L++ R + EL + G P+ +YN+L++A CL A++LF +M
Sbjct: 157 LNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM 216
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
R V PD ++ LI C ++ A EL ++M +G V T LI G+C G
Sbjct: 217 LERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLN----KGFVPDRT-LIGGLCDQGM 271
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
+ +EM+ KG ++ N L+ GK EEA V+E + + G +S T +
Sbjct: 272 FDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEM 331
Query: 297 MIGEYCRENNFEEAYRILDGVEGVKPDVIG 326
+I C E+ E+ L+ + VK ++ G
Sbjct: 332 VIPLICNEDESEKIKLFLE--DAVKEEITG 359
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 86/177 (48%), Gaps = 6/177 (3%)
Query: 270 GKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGY 327
G ++A + + R G N+ + N+++ +C ++ AY++ + V PDV Y
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 328 NVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMF 387
+ + C++G+ + AM+L DM +G PD RTL GLC F E L+EM+
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMIS 284
Query: 388 KGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEK 444
KG++P N V C G E V+ + G+ + W++V+ ++C ++
Sbjct: 285 KGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDE 341
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 100/232 (43%), Gaps = 10/232 (4%)
Query: 231 VCKIGELSWAFRIKDEMVK---KGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGC 287
+ K+G + I D + K G L ++ LI +A E+ L +M E
Sbjct: 91 ILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNF 150
Query: 288 EWNSVTCNVMIGEYCRENNF-EEAYRILDG--VEGVKPDVIGYNVFLGWLCKEGKWSEAM 344
N ++ + ++A+ + + GV P+ YN+ + C S A
Sbjct: 151 TPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAY 210
Query: 345 DLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSEL 404
LF M R PDV +Y+ L G CR Q A+ +LD+M+ KG+ P + L
Sbjct: 211 QLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVP----DRTLIGGL 266
Query: 405 CQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
C +G F+ L ++ SKG + + + ++ C KV E+ ++++ ++
Sbjct: 267 CDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVM 318
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 150/321 (46%), Gaps = 28/321 (8%)
Query: 137 ELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLC 196
++ +R E + C+ +++ C G D A LF++M++ G+ PD + +IH LC
Sbjct: 352 DMLSRGFELNSIIPCS--VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 197 ENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDA 256
+ + A L +EM + L T + L+ G+C+ G L A + D ++ G LD
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRT-HGALLLGLCQKGMLLEARSLLDSLISSGETLDI 468
Query: 257 ALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDG 316
LYN +I+ K+G EEAL + + + E G + T N +I YC+ N EA +ILD
Sbjct: 469 VLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDV 528
Query: 317 VE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQ 374
++ G+ P V+ Y + G +L +M G P VTY +F GLCR +
Sbjct: 529 IKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK 588
Query: 375 FREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDV 434
VL E +F E C++G L D+ S+G ++ ++
Sbjct: 589 HENCNHVLRERIF---------------EKCKQG--------LRDMESEGIPPDQITYNT 625
Query: 435 VLSMVCKPEKVPESFELLDAL 455
++ +C+ + + +F L+ +
Sbjct: 626 IIQYLCRVKHLSGAFVFLEIM 646
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 156/334 (46%), Gaps = 5/334 (1%)
Query: 115 TLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELF 173
++ S N L++ L ELA+ + G PD+ TYNIL + L G A+E+
Sbjct: 256 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVI 315
Query: 174 DEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMF-REFKLEGCVTIYTNLIKGVC 232
+M +G+ PD T+ L+ C+ + L ++M R F+L + + ++ G+C
Sbjct: 316 RDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC-SVMLSGLC 374
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
K G + A + ++M GL D Y+ +I+ L K GK + AL + +EM + NS
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434
Query: 293 TCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM 350
T ++ C++ EA +LD + G D++ YN+ + K G EA++LF +
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVV 494
Query: 351 PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNF 410
G P V T+ +L G C+ + EA +LD + G AP + + GN
Sbjct: 495 IETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNT 554
Query: 411 ELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEK 444
+ + + ++ ++G + V+ +C+ K
Sbjct: 555 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK 588
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 151/343 (44%), Gaps = 40/343 (11%)
Query: 118 SFNTLLHALLTCRQF---DAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFD 174
+++T++ L CRQ DAV L + P ++N ++ C G D A F
Sbjct: 189 TYSTVVDGL--CRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFC 246
Query: 175 EMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKI 234
+ G+ P + LI+ LC + EA EL +M + VT Y L KG +
Sbjct: 247 TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT-YNILAKGFHLL 305
Query: 235 GELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT- 293
G +S A+ + +M+ KGL D Y L+ + G + L +L++M G E NS+
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 294 CNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR 353
C+VM L LCK G+ EA+ LF+ M
Sbjct: 366 CSVM---------------------------------LSGLCKTGRIDEALSLFNQMKAD 392
Query: 354 GCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELL 413
G +PD+V Y + GLC+ +F A+ + DEM K P S+ A + LCQ+G
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 414 STVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
++L L S G+ + ++++V+ K + E+ EL ++
Sbjct: 453 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI 495
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 132/343 (38%), Gaps = 48/343 (13%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
+PD Y+I+I C G D A L+DEM + + P+ T G L+ LC+ L EA
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454
Query: 207 LKEEMFRE---------------FKLEGC-------------------VTIYTNLIKGVC 232
L + + + GC V + +LI G C
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
K ++ A +I D + GL Y TL++A G + + EM+ G +V
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 293 TCNVMIGEYCR------------ENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEG 338
T +V+ CR E FE+ + L +E G+ PD I YN + +LC+
Sbjct: 575 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 634
Query: 339 KWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLN 398
S A M R TY L D LC + R+A + + + +
Sbjct: 635 HLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYT 694
Query: 399 AFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCK 441
+ C +G+ E+ + L +G + + V++ +C+
Sbjct: 695 TLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 164/380 (43%), Gaps = 45/380 (11%)
Query: 118 SFNTLLHALLTCRQFD-AVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEM 176
S + L+ L Q D A+ L G PD TYN++I C +GH A L ++M
Sbjct: 141 SCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDM 200
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC---VTIYTNLIKGVCK 233
G PD T+ T+I + + +A ++ + GC + YT L++ VC+
Sbjct: 201 SLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQ----NGCPPFMITYTVLVELVCR 256
Query: 234 IGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
+ A + ++M +G D YN+L+N + G EE V++ + G E N+VT
Sbjct: 257 YCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVT 316
Query: 294 CNVMIGEYCRENNFEEAYRILDGVEGVK--PDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
N ++ C ++E IL+ + P VI YN+ + LCK S A+D F+ M
Sbjct: 317 YNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQML 376
Query: 352 RRGCAPDVVTYRTLF-----------------------------------DGLCRWRQFR 376
+ C PD+VTY T+ DGL + +
Sbjct: 377 EQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMK 436
Query: 377 EAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVL 436
+A+ + +M+ G P + + C+ E VL + +++G + +V+
Sbjct: 437 KALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVI 496
Query: 437 SMVCKPEKVPESFELLDALV 456
+CK +++ + E+++ ++
Sbjct: 497 QGLCKKKEIEMAIEVVEIML 516
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 131/311 (42%), Gaps = 34/311 (10%)
Query: 129 CRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATF 188
C A+ L A E PD TYN L+ +C RG+ + + + S G+ + T+
Sbjct: 258 CGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTY 317
Query: 189 GTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMV 248
TL+H LC + E E+ M++ +T Y LI G+CK LS A +M+
Sbjct: 318 NTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVIT-YNILINGLCKARLLSRAIDFFYQML 376
Query: 249 KKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFE 308
++ D YNT++ A+ K G ++A+ +L ++ C
Sbjct: 377 EQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCC--------------------- 415
Query: 309 EAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDG 368
P +I YN + L K+G +A++L+H M G PD +T R+L G
Sbjct: 416 ------------PPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYG 463
Query: 369 LCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICN 428
CR EA VL E +G + LC++ E+ V+ + + G +
Sbjct: 464 FCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPD 523
Query: 429 EGIWDVVLSMV 439
E I+ ++ V
Sbjct: 524 ETIYTAIVKGV 534
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 147/370 (39%), Gaps = 48/370 (12%)
Query: 124 HALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRG--V 181
H LL+ D V + A R+ EF T N+ R ++ + S G
Sbjct: 51 HGLLSSVCIDNVNDHAERSSEFHHYGVGT-NLRARVKPMKQFG---------LSSDGPIT 100
Query: 182 RPDQATFGTLIHRLCENSRLREAFELKEEMFREFK------------------------- 216
D+ T ++H LC N +L +A +L E M R +
Sbjct: 101 ENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMC 160
Query: 217 ------LEGCV--TIYTNLIKG-VCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+ G V TI N+I G +CK G + A + ++M G D YNT+I +F
Sbjct: 161 ILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMF 220
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILD--GVEGVKPDVI 325
G E+A+R ++ + GC +T V++ CR A +L+ VEG PD++
Sbjct: 221 DYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIV 280
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
YN + + C+ G E + + G + VTY TL LC + E +L+ M
Sbjct: 281 TYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIM 340
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKV 445
Y P N ++ LC+ + + + + ++ VL + K V
Sbjct: 341 YQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMV 400
Query: 446 PESFELLDAL 455
++ ELL L
Sbjct: 401 DDAIELLGLL 410
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 111/234 (47%), Gaps = 7/234 (2%)
Query: 46 LSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHV-ITFYARARQPSRAVQTF 104
++Y+ ++ L + E+E++L+ ++ + P + ++ I +AR SRA+ F
Sbjct: 315 VTYNTLLHSLCSHEYWDEVEEILNIMYQTSY--CPTVITYNILINGLCKARLLSRAIDFF 372
Query: 105 LSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDA-CTYNILIRASCLR 163
+ +C + ++NT+L A+ D EL P TYN +I +
Sbjct: 373 YQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKK 432
Query: 164 GHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE-LKEEMFREFKLEGCVT 222
G +A EL+ +M G+ PD T +LI+ C + + EA + LKE R + G +
Sbjct: 433 GLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRG--S 490
Query: 223 IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEAL 276
Y +I+G+CK E+ A + + M+ G K D +Y ++ + + G EA+
Sbjct: 491 TYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 150/321 (46%), Gaps = 28/321 (8%)
Query: 137 ELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLC 196
++ +R E + C+ +++ C G D A LF++M++ G+ PD + +IH LC
Sbjct: 352 DMLSRGFELNSIIPCS--VMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 197 ENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDA 256
+ + A L +EM + L T + L+ G+C+ G L A + D ++ G LD
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRT-HGALLLGLCQKGMLLEARSLLDSLISSGETLDI 468
Query: 257 ALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDG 316
LYN +I+ K+G EEAL + + + E G + T N +I YC+ N EA +ILD
Sbjct: 469 VLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDV 528
Query: 317 VE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQ 374
++ G+ P V+ Y + G +L +M G P VTY +F GLCR +
Sbjct: 529 IKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK 588
Query: 375 FREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDV 434
VL E +F E C++G L D+ S+G ++ ++
Sbjct: 589 HENCNHVLRERIF---------------EKCKQG--------LRDMESEGIPPDQITYNT 625
Query: 435 VLSMVCKPEKVPESFELLDAL 455
++ +C+ + + +F L+ +
Sbjct: 626 IIQYLCRVKHLSGAFVFLEIM 646
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 156/334 (46%), Gaps = 5/334 (1%)
Query: 115 TLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELF 173
++ S N L++ L ELA+ + G PD+ TYNIL + L G A+E+
Sbjct: 256 SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVI 315
Query: 174 DEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMF-REFKLEGCVTIYTNLIKGVC 232
+M +G+ PD T+ L+ C+ + L ++M R F+L + + ++ G+C
Sbjct: 316 RDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPC-SVMLSGLC 374
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
K G + A + ++M GL D Y+ +I+ L K GK + AL + +EM + NS
Sbjct: 375 KTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSR 434
Query: 293 TCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM 350
T ++ C++ EA +LD + G D++ YN+ + K G EA++LF +
Sbjct: 435 THGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVV 494
Query: 351 PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNF 410
G P V T+ +L G C+ + EA +LD + G AP + + GN
Sbjct: 495 IETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNT 554
Query: 411 ELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEK 444
+ + + ++ ++G + V+ +C+ K
Sbjct: 555 KSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWK 588
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 151/343 (44%), Gaps = 40/343 (11%)
Query: 118 SFNTLLHALLTCRQF---DAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFD 174
+++T++ L CRQ DAV L + P ++N ++ C G D A F
Sbjct: 189 TYSTVVDGL--CRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFC 246
Query: 175 EMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKI 234
+ G+ P + LI+ LC + EA EL +M + VT Y L KG +
Sbjct: 247 TVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT-YNILAKGFHLL 305
Query: 235 GELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT- 293
G +S A+ + +M+ KGL D Y L+ + G + L +L++M G E NS+
Sbjct: 306 GMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIP 365
Query: 294 CNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR 353
C+VM L LCK G+ EA+ LF+ M
Sbjct: 366 CSVM---------------------------------LSGLCKTGRIDEALSLFNQMKAD 392
Query: 354 GCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELL 413
G +PD+V Y + GLC+ +F A+ + DEM K P S+ A + LCQ+G
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 414 STVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
++L L S G+ + ++++V+ K + E+ EL ++
Sbjct: 453 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI 495
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 132/343 (38%), Gaps = 48/343 (13%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
+PD Y+I+I C G D A L+DEM + + P+ T G L+ LC+ L EA
Sbjct: 395 SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARS 454
Query: 207 LKEEMFRE---------------FKLEGC-------------------VTIYTNLIKGVC 232
L + + + GC V + +LI G C
Sbjct: 455 LLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
K ++ A +I D + GL Y TL++A G + + EM+ G +V
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNV 574
Query: 293 TCNVMIGEYCR------------ENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEG 338
T +V+ CR E FE+ + L +E G+ PD I YN + +LC+
Sbjct: 575 TYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVK 634
Query: 339 KWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLN 398
S A M R TY L D LC + R+A + + + +
Sbjct: 635 HLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYT 694
Query: 399 AFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCK 441
+ C +G+ E+ + L +G + + V++ +C+
Sbjct: 695 TLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 148/311 (47%), Gaps = 2/311 (0%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P+ + LI C +G +AFE+ +EM G +P+ T LI LC+ +AF L
Sbjct: 285 PNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRL 344
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
++ R + V YT++I G CK +L+ A + M ++GL + Y TLIN
Sbjct: 345 FLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHC 404
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVI 325
KAG A ++ M + G N T N I C+++ EAY +L+ G++ D +
Sbjct: 405 KAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGV 464
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
Y + + CK+ ++A+ F M + G D+ L CR ++ +E+ + +
Sbjct: 465 TYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLV 524
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKV 445
+ G P + + +S C+EG+ +L ++ G + + + ++S +CK V
Sbjct: 525 VSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMV 584
Query: 446 PESFELLDALV 456
E+ +L +A++
Sbjct: 585 DEACKLYEAMI 595
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 169/408 (41%), Gaps = 53/408 (12%)
Query: 47 SYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVI-TFYARARQPSRAVQTFL 105
SY L++ R + E ++ L + R +P+ C +I T +RA+ F
Sbjct: 219 SYKLMVIGCFRDGKIQEADRWLTGMI--QRGFIPDNATCTLILTALCENGLVNRAIWYFR 276
Query: 106 SIPSFRCQRTLKSFNTLLHALL---TCRQFDAVTELAARAGEFGAPDACTYNILIRASCL 162
+ + L +F +L+ L + +Q + E R G P+ T+ LI C
Sbjct: 277 KMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG--WKPNVYTHTALIDGLCK 334
Query: 163 RGHADRAFELFDEM-RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC- 220
RG ++AF LF ++ RS +P+ T+ ++I C+ +L A E +F K +G
Sbjct: 335 RGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA----EMLFSRMKEQGLF 390
Query: 221 --VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
V YT LI G CK G A+ + + M +G + YN I++L K + EA +
Sbjct: 391 PNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYEL 450
Query: 279 LEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRIL-----DGVE--------------- 318
L + G E + VT ++I E C++N+ +A G E
Sbjct: 451 LNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCR 510
Query: 319 -----------------GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVT 361
G+ P Y + CKEG A+ FH+M R GC PD T
Sbjct: 511 QKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFT 570
Query: 362 YRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGN 409
Y +L GLC+ EA + + M+ +G +P E C+ +
Sbjct: 571 YGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRND 618
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 137/282 (48%), Gaps = 14/282 (4%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
P + T N ++ + G + A +FDEM RGV PD +++ ++ + +++EA
Sbjct: 179 TPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADR 238
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELS---WAFRIKDEMVKKGLKLDAALYNTLI 263
M + + T T ++ +C+ G ++ W FR +M+ G K + + +LI
Sbjct: 239 WLTGMIQRGFIPDNATC-TLILTALCENGLVNRAIWYFR---KMIDLGFKPNLINFTSLI 294
Query: 264 NALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRI---LDGVEGV 320
+ L K G ++A +LEEM G + N T +I C+ E+A+R+ L +
Sbjct: 295 DGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTY 354
Query: 321 KPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVV 380
KP+V Y +G CKE K + A LF M +G P+V TY TL +G C+ F A
Sbjct: 355 KPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYE 414
Query: 381 VLDEMMFKGYAPLSKNLNAFVSELCQEGN----FELLSTVLS 418
+++ M +G+ P NA + LC++ +ELL+ S
Sbjct: 415 LMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFS 456
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 132/322 (40%), Gaps = 37/322 (11%)
Query: 138 LAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLC 196
L +R E G P+ TY LI C G RA+EL + M G P+ T+ I LC
Sbjct: 380 LFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLC 439
Query: 197 ENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDA 256
+ SR EA+EL + F LE YT LI+ CK +++ A M K G + D
Sbjct: 440 KKSRAPEAYELLNKAF-SCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADM 498
Query: 257 ALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDG 316
L N LI A + K +E+ R+ + + G T MI YC+E + + A +
Sbjct: 499 RLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHN 558
Query: 317 VE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVT------------- 361
++ G PD Y + LCK+ EA L+ M RG +P VT
Sbjct: 559 MKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRND 618
Query: 362 -------------------YRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVS 402
RTL LC ++ A + +++ K + L AF +
Sbjct: 619 SANAMILLEPLDKKLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTT 678
Query: 403 ELCQEGNFELLSTVLSDLTSKG 424
C E L T L++ S+G
Sbjct: 679 A-CSESGKNNLVTDLTERISRG 699
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 195 LCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKL 254
L N L++A E+ M R F +IG L+ A + +M +GL
Sbjct: 137 LLANGNLQKAHEVMRCMLRNFS----------------EIGRLNEAVGMVMDMQNQGLTP 180
Query: 255 DAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRIL 314
+ N ++ + G E A V +EM G +S + +M+ R+ +EA R L
Sbjct: 181 SSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWL 240
Query: 315 DGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRW 372
G+ G PD + L LC+ G + A+ F M G P+++ + +L DGLC+
Sbjct: 241 TGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKK 300
Query: 373 RQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEG 408
++A +L+EM+ G+ P A + LC+ G
Sbjct: 301 GSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRG 336
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 2/189 (1%)
Query: 270 GKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILD--GVEGVKPDVIGY 327
G+ EA+ ++ +M+ G +S+T N ++ E A + D V GV PD Y
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220
Query: 328 NVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMF 387
+ + ++GK EA M +RG PD T + LC A+ +M+
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280
Query: 388 KGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPE 447
G+ P N + + LC++G+ + +L ++ G N ++ +CK +
Sbjct: 281 LGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEK 340
Query: 448 SFELLDALV 456
+F L LV
Sbjct: 341 AFRLFLKLV 349
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 166/370 (44%), Gaps = 14/370 (3%)
Query: 38 HRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQP 97
H R ++++ + I KL +A L E VL +L L + + VI + + +P
Sbjct: 299 HYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQ-DSVSVSSVIDGFCKVGKP 357
Query: 98 SRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNIL 156
A++ I SFR + + +++ L + + + + E G PD Y +
Sbjct: 358 EEAIKL---IHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTM 414
Query: 157 IRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFK 216
I C G D+AF+ F + G P T LI + +A E +FR K
Sbjct: 415 IDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDA----ESVFRNMK 470
Query: 217 LEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKE 273
EG V Y NL+ G K +L+ F + DEM G+ D A YN LI+++ G +
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 274 EALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGV--KPDVIGYNVFL 331
EA ++ E+ G +++ +IG + + +F+EA+ + + + KPDV+ + L
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 332 GWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYA 391
CK + +A+ LF+ + G PDVV Y TL G C +A ++ M+ +G
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Query: 392 PLSKNLNAFV 401
P +A V
Sbjct: 651 PNESTHHALV 660
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 165/383 (43%), Gaps = 19/383 (4%)
Query: 78 RVPEPLLCHVITFYARARQPSRAVQTFLSIPSFR-------CQRTLKSFNTLLHALLTCR 130
RV E + +I R R+ + A++ + F C LK +H L R
Sbjct: 198 RVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEI-LRVHGLELAR 256
Query: 131 QFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGT 190
+F V + +R +A ++ IR C G+ D+ +EL M+ G+RPD F
Sbjct: 257 EF--VEHMLSRGRHL---NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTV 311
Query: 191 LIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKK 250
I +LC+ L+EA + ++ + F + +++I G CK+G+ A ++
Sbjct: 312 FIDKLCKAGFLKEATSVLFKL-KLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF--- 367
Query: 251 GLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA 310
L+ + +Y++ ++ + G A + +E+ E G + V MI YC ++A
Sbjct: 368 RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKA 427
Query: 311 YRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDG 368
++ + G P + + +G + G S+A +F +M G DVVTY L G
Sbjct: 428 FQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHG 487
Query: 369 LCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICN 428
+ Q + ++DEM G +P N + + G + + ++S+L +G + +
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPS 547
Query: 429 EGIWDVVLSMVCKPEKVPESFEL 451
+ V+ K E+F L
Sbjct: 548 TLAFTDVIGGFSKRGDFQEAFIL 570
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 125 bits (313), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 166/370 (44%), Gaps = 14/370 (3%)
Query: 38 HRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQP 97
H R ++++ + I KL +A L E VL +L L + + VI + + +P
Sbjct: 299 HYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQ-DSVSVSSVIDGFCKVGKP 357
Query: 98 SRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNIL 156
A++ I SFR + + +++ L + + + + E G PD Y +
Sbjct: 358 EEAIKL---IHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTM 414
Query: 157 IRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFK 216
I C G D+AF+ F + G P T LI + +A E +FR K
Sbjct: 415 IDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDA----ESVFRNMK 470
Query: 217 LEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKE 273
EG V Y NL+ G K +L+ F + DEM G+ D A YN LI+++ G +
Sbjct: 471 TEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYID 530
Query: 274 EALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGV--KPDVIGYNVFL 331
EA ++ E+ G +++ +IG + + +F+EA+ + + + KPDV+ + L
Sbjct: 531 EANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALL 590
Query: 332 GWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYA 391
CK + +A+ LF+ + G PDVV Y TL G C +A ++ M+ +G
Sbjct: 591 HGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGML 650
Query: 392 PLSKNLNAFV 401
P +A V
Sbjct: 651 PNESTHHALV 660
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 165/383 (43%), Gaps = 19/383 (4%)
Query: 78 RVPEPLLCHVITFYARARQPSRAVQTFLSIPSFR-------CQRTLKSFNTLLHALLTCR 130
RV E + +I R R+ + A++ + F C LK +H L R
Sbjct: 198 RVLETVFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEI-LRVHGLELAR 256
Query: 131 QFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGT 190
+F V + +R +A ++ IR C G+ D+ +EL M+ G+RPD F
Sbjct: 257 EF--VEHMLSRGRHL---NAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTV 311
Query: 191 LIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKK 250
I +LC+ L+EA + ++ + F + +++I G CK+G+ A ++
Sbjct: 312 FIDKLCKAGFLKEATSVLFKL-KLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF--- 367
Query: 251 GLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA 310
L+ + +Y++ ++ + G A + +E+ E G + V MI YC ++A
Sbjct: 368 RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKA 427
Query: 311 YRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDG 368
++ + G P + + +G + G S+A +F +M G DVVTY L G
Sbjct: 428 FQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHG 487
Query: 369 LCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICN 428
+ Q + ++DEM G +P N + + G + + ++S+L +G + +
Sbjct: 488 YGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPS 547
Query: 429 EGIWDVVLSMVCKPEKVPESFEL 451
+ V+ K E+F L
Sbjct: 548 TLAFTDVIGGFSKRGDFQEAFIL 570
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 157/359 (43%), Gaps = 8/359 (2%)
Query: 39 RPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPS 98
+ +HS +YD+ + LG+AK M++ + ++ D V + ++ +A A +
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKL--VTLNTVAKIMRRFAGAGEWE 172
Query: 99 RAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIR 158
AV F + F ++ +S N LL L ++ + + + P+A T+NI I
Sbjct: 173 EAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIH 232
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
C + A EM+ G RP ++ T+I C+ + +E+ EM
Sbjct: 233 GWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPP 292
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
+T YT ++ + E A R+ M + G K D+ YN LI+ L +AG+ EEA RV
Sbjct: 293 NSIT-YTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERV 351
Query: 279 LE-EMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG---VKPDVIGYNVFLGWL 334
EM E G N+ T N MI YC + ++A +L +E PDV Y L
Sbjct: 352 FRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSC 411
Query: 335 CKEGKWSEAMDLFHDM-PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
K G E L +M + + D TY L LCR A + +EM+ + P
Sbjct: 412 FKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 157/359 (43%), Gaps = 8/359 (2%)
Query: 39 RPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPS 98
+ +HS +YD+ + LG+AK M++ + ++ D V + ++ +A A +
Sbjct: 115 KGHKHSSDAYDMAVDILGKAKKWDRMKEFVERMRGDKL--VTLNTVAKIMRRFAGAGEWE 172
Query: 99 RAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIR 158
AV F + F ++ +S N LL L ++ + + + P+A T+NI I
Sbjct: 173 EAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIH 232
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
C + A EM+ G RP ++ T+I C+ + +E+ EM
Sbjct: 233 GWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPP 292
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
+T YT ++ + E A R+ M + G K D+ YN LI+ L +AG+ EEA RV
Sbjct: 293 NSIT-YTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERV 351
Query: 279 LE-EMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG---VKPDVIGYNVFLGWL 334
EM E G N+ T N MI YC + ++A +L +E PDV Y L
Sbjct: 352 FRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSC 411
Query: 335 CKEGKWSEAMDLFHDM-PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
K G E L +M + + D TY L LCR A + +EM+ + P
Sbjct: 412 FKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITP 470
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 167/383 (43%), Gaps = 46/383 (12%)
Query: 2 ATPKPISPFR--LSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAK 59
A ISP + L+SL+ +++P + F FR ++ YD + +L AK
Sbjct: 32 AVTAAISPPQKSLTSLVNGERNPKRIVEKF---KKACESERFRTNIAVYDRTVRRLVAAK 88
Query: 60 MLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSF 119
L +E++L + R E +I+ Y +A A + F +P+ C+R++ SF
Sbjct: 89 RLHYVEEILEE-QKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSF 147
Query: 120 NTLLHALLTCRQFDAVTELAAR-AGEFG-APDACTYNILIRASCLRGHADRAFELFDEMR 177
N LL A ++FD V EL G+ PD +YN LI+A C + A L DE+
Sbjct: 148 NALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIE 207
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGEL 237
++G++PD TF TL + ++ +KG ++GE
Sbjct: 208 NKGLKPDIVTFNTL-------------------------------LLSSYLKGQFELGEE 236
Query: 238 SWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVM 297
WA +MV+K + +D YN + L K +E + + E++ G + + + N M
Sbjct: 237 IWA-----KMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAM 291
Query: 298 IGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGC 355
I E +EA + G +PD + + L +CK G + A++LF + +
Sbjct: 292 IRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRY 351
Query: 356 APDVVTYRTLFDGLCRWRQFREA 378
T + L D L + + EA
Sbjct: 352 LVGQTTLQQLVDELVKGSKREEA 374
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 140/324 (43%), Gaps = 20/324 (6%)
Query: 95 RQPSRAVQTFL-SIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTY 153
R P R V+ F + S R + + ++ + L+ ++ V E+ ++ D
Sbjct: 52 RNPKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYR--DMSKE 109
Query: 154 NILIRASCLRGHA---DRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEE 210
R L G A + A ++F+EM +R + +F L+ RL + F++ EE
Sbjct: 110 GFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAY----RLSKKFDVVEE 165
Query: 211 MFREFKLEGCVTI------YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLIN 264
+F E L G ++I Y LIK +C+ L A + DE+ KGLK D +NTL+
Sbjct: 166 LFNE--LPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLL 223
Query: 265 ALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKP 322
+ + G+ E + +M E + T N + E +E + ++ G+KP
Sbjct: 224 SSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKP 283
Query: 323 DVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVL 382
DV +N + EGK EA + ++ + G PD T+ L +C+ F A+ +
Sbjct: 284 DVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELF 343
Query: 383 DEMMFKGYAPLSKNLNAFVSELCQ 406
E K Y L V EL +
Sbjct: 344 KETFSKRYLVGQTTLQQLVDELVK 367
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 185/409 (45%), Gaps = 11/409 (2%)
Query: 25 AFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHR-VPEPL 83
A+ F+ N QT + HS +Y+ ++ LG+ + M +++++++ + + V
Sbjct: 149 AYGFFIWANSQTG---YVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDT 205
Query: 84 LCHVITFYARARQPSRAVQTFLSI-PSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARA 142
+ V+ A++ + ++AV FL + S+ + + N+L+ AL+ + E+ +
Sbjct: 206 MSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL 265
Query: 143 GEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLR 202
+ PDA T+NILI C D A + D M+ PD T+ + + C+ R
Sbjct: 266 FDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFR 325
Query: 203 EAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTL 262
E+ EEM RE V YT ++ + K +++ A + ++M + G DA Y++L
Sbjct: 326 RVNEMLEEM-RENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSL 384
Query: 263 INALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV----- 317
I+ L K G+ ++A + E+M G + + N MI + E A R+L +
Sbjct: 385 IHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEG 444
Query: 318 EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFRE 377
E P+V Y L C + K L H M + + DV TY L GLC + E
Sbjct: 445 ESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEE 504
Query: 378 AVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKI 426
A + +E + KG P V EL ++ E + S + SK I
Sbjct: 505 ACLFFEEAVRKGMVPRDSTCKMLVDELEKKNMAEAKLKIQSLVQSKTMI 553
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 12/205 (5%)
Query: 259 YNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVM------IGEYCRENNFEEAYR 312
YN +++ L K + ++ EM + E VT + M + + + N +A+
Sbjct: 169 YNAMVDVLGKCRNFDLMWELVNEMNKNE-ESKLVTLDTMSKVMRRLAKSGKYNKAVDAFL 227
Query: 313 ILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRW 372
++ GVK D I N + L KE A ++F + PD T+ L G C+
Sbjct: 228 EMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKL-FDTIKPDARTFNILIHGFCKA 286
Query: 373 RQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGI- 431
R+F +A ++D M + P +FV C+EG+F ++ +L ++ G CN +
Sbjct: 287 RKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENG--CNPNVV 344
Query: 432 -WDVVLSMVCKPEKVPESFELLDAL 455
+ +V+ + K ++V E+ + + +
Sbjct: 345 TYTIVMHSLGKSKQVAEALGVYEKM 369
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 207/460 (45%), Gaps = 26/460 (5%)
Query: 2 ATPKPISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKML 61
+ P P++ +S L+ S K S F++ N R F + L +Y + +
Sbjct: 137 SNPTPMASVLVSKLVDSAK--SFGFEV--------NSRAFNYLLNAY-------SKDRQT 179
Query: 62 PEMEQVLHQ-LHLDTRHRVPE-PLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSF 119
+++Q L LD +P P + ++ + + A + + + + +
Sbjct: 180 DHAVDIVNQMLELDV---IPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTT 236
Query: 120 NTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEMRS 178
L+ A L + E+ +RA E GA PD+ Y++ ++A C A L EM+
Sbjct: 237 QLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKE 296
Query: 179 RGV-RPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGEL 237
+ + P Q T+ ++I + + +A LK+EM + + V T+LI G CK +L
Sbjct: 297 KKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSD-GISMNVVAATSLITGHCKNNDL 355
Query: 238 SWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVM 297
A + D+M K+G ++ ++ LI K G+ E+AL ++M G + + +
Sbjct: 356 VSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTI 415
Query: 298 IGEYCRENNFEEAYRILD-GVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCA 356
I + + EEA ++ D E +V N L WLCK+GK EA +L M RG
Sbjct: 416 IQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIG 475
Query: 357 PDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTV 416
P+VV+Y + G CR + A +V ++ KG P + + + + + + V
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEV 535
Query: 417 LSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
++ +TS N ++ +++ +CK + ++ ELL ++
Sbjct: 536 VNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMI 575
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 144/312 (46%), Gaps = 4/312 (1%)
Query: 148 PDACTYNILIRASCLRGHADR-AFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
P+ TY+ILI C R H ++ A E+ + M S + + + T+I+ LC+ + +A E
Sbjct: 511 PNNYTYSILIDG-CFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARE 569
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
L M E +L Y ++I G K GE+ A +EM G+ + Y +L+N L
Sbjct: 570 LLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGL 629
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDV 324
K + ++AL + +EM+ G + + +I +C+ +N E A + + EG+ P
Sbjct: 630 CKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQ 689
Query: 325 IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDE 384
YN + G A+DL+ M + G D+ TY TL DGL + A + E
Sbjct: 690 PIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTE 749
Query: 385 MMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEK 444
M G P V+ L ++G F + + ++ N I++ V++ +
Sbjct: 750 MQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGN 809
Query: 445 VPESFELLDALV 456
+ E+F L D ++
Sbjct: 810 LDEAFRLHDEML 821
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 119/254 (46%), Gaps = 4/254 (1%)
Query: 118 SFNTLLHALLTCRQFD-AVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEM 176
S+N+++ + D AV G +P+ TY L+ C D+A E+ DEM
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
+++GV+ D +G LI C+ S + A L E+ E L IY +LI G +G
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE-GLNPSQPIYNSLISGFRNLGN 704
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
+ A + +M+K GL+ D Y TLI+ L K G A + EM+ G + + V
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTV 764
Query: 297 MIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
++ ++ F + ++ + ++ V P+V+ YN + +EG EA L +M +G
Sbjct: 765 IVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKG 824
Query: 355 CAPDVVTYRTLFDG 368
PD T+ L G
Sbjct: 825 ILPDGATFDILVSG 838
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 109/457 (23%), Positives = 190/457 (41%), Gaps = 46/457 (10%)
Query: 7 ISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQ 66
ISPF + +D + +LF + + F + + L R ++ E+E
Sbjct: 66 ISPFVFDRI----QDVEIGVKLFDWLSSEKKDEFFSNGFACSSFL-KLLARYRIFNEIED 120
Query: 67 VLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTF-LSIPSFRCQRTLKSFNTLLHA 125
VL L + ++ L HV+ YA + S+AV+ + + + + + N+LL
Sbjct: 121 VLGNLR-NENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSL 179
Query: 126 LLTCRQF--------------DAVTE----------------------LAARAGEFGAPD 149
L+ R+ D+V + R G+ P+
Sbjct: 180 LVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPN 239
Query: 150 ACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKE 209
YN +I C G + A+ +F E++ +G P TFGT+I+ C+ + L
Sbjct: 240 IVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLS 299
Query: 210 EMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKA 269
E+ +E L V N+I + G ++ K D A YN LIN L K
Sbjct: 300 EV-KERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKE 358
Query: 270 GKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGY 327
GKKE A+ L+E + G N+++ +I YC+ ++ A ++L + G KPD++ Y
Sbjct: 359 GKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTY 418
Query: 328 NVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMF 387
+ + L G +A+++ + RG +PD Y L GLC+ +F A ++ EM+
Sbjct: 419 GILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLD 478
Query: 388 KGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
+ P + + + G+F+ V S KG
Sbjct: 479 RNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKG 515
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 127/272 (46%), Gaps = 4/272 (1%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEM 176
S+ L+ A +++D ++L + E G PD TY ILI + GH D A + ++
Sbjct: 382 SYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL 441
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
RGV PD A + L+ LC+ R A L EM L +Y LI G + G+
Sbjct: 442 IDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAY-VYATLIDGFIRSGD 500
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
A ++ V+KG+K+D +N +I ++G +EAL + M E + T +
Sbjct: 501 FDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYST 560
Query: 297 MIGEYCRENNFEEAYRILDGVEG--VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
+I Y ++ + A +I +E KP+V+ Y + C +G + A + F +M R
Sbjct: 561 IIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRD 620
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMM 386
P+VVTY TL L + E V E+M
Sbjct: 621 LVPNVVTYTTLIRSLAKESSTLEKAVYYWELM 652
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 138/305 (45%), Gaps = 9/305 (2%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD TYNILI C G + A DE +G+ P+ ++ LI C++ + +++
Sbjct: 343 PDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKS----KEYDI 398
Query: 208 KEEMFREFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLIN 264
++ + GC + Y LI G+ G + A +K +++ +G+ DAA+YN L++
Sbjct: 399 ASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMS 458
Query: 265 ALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRI--LDGVEGVKP 322
L K G+ A + EM + ++ +I + R +F+EA ++ L +GVK
Sbjct: 459 GLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKV 518
Query: 323 DVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVL 382
DV+ +N + C+ G EA+ + M PD TY T+ DG + + A+ +
Sbjct: 519 DVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIF 578
Query: 383 DEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKP 442
M P + ++ C +G+F++ ++ + + N + ++ + K
Sbjct: 579 RYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKE 638
Query: 443 EKVPE 447
E
Sbjct: 639 SSTLE 643
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 149/380 (39%), Gaps = 62/380 (16%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
+I Y ++++ A + L + C+ + ++ L+H L+ D + + + G
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445
Query: 147 -APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREA- 204
+PDA YN+L+ C G A LF EM R + PD + TLI + EA
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505
Query: 205 --FELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTL 262
F L E + K++ V + +IKG C+ G L A + M ++ L D Y+T+
Sbjct: 506 KVFSLSVE--KGVKVD--VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTI 561
Query: 263 INALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNF---EEAYRILDGVEG 319
I+ K A+++ M + C+ N VT +I +C + +F EE ++ + +
Sbjct: 562 IDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQ-LRD 620
Query: 320 VKPDVIGYNVFLGWLCKE------------------------------------------ 337
+ P+V+ Y + L KE
Sbjct: 621 LVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVL 680
Query: 338 --------GKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKG 389
G+ S + FH M G + Y + LC + A + D+M+ KG
Sbjct: 681 AEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKG 740
Query: 390 YAPLSKNLNAFVSELCQEGN 409
++P + A + C GN
Sbjct: 741 FSPDPVSFAAILHGFCVVGN 760
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 144/329 (43%), Gaps = 9/329 (2%)
Query: 130 RQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFG 189
R D + E+ R + N LI C G A ++F M ++PD T+
Sbjct: 352 RVHDNMIEIGVRT------NTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYN 405
Query: 190 TLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVK 249
TL+ C + EA +L ++M ++ ++ V Y L+KG +IG + M+K
Sbjct: 406 TLVDGYCRAGYVDEALKLCDQMCQK-EVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLK 464
Query: 250 KGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEE 309
+G+ D +TL+ ALFK G EA+++ E + G +++T NVMI C+ E
Sbjct: 465 RGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNE 524
Query: 310 AYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFD 367
A ILD V KP V Y K G EA + M R+G P + Y TL
Sbjct: 525 AKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLIS 584
Query: 368 GLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKIC 427
G ++R + ++ E+ +G P A ++ C G + ++ KG
Sbjct: 585 GAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITL 644
Query: 428 NEGIWDVVLSMVCKPEKVPESFELLDALV 456
N I + + + + +K+ E+ LL +V
Sbjct: 645 NVNICSKIANSLFRLDKIDEACLLLQKIV 673
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 131/260 (50%), Gaps = 3/260 (1%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
+ TYN LI + G + + M RGV + T+ +LI C+ + EA E
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEA-EHV 318
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
E+ +E KL +Y L+ G C+ G++ A R+ D M++ G++ + + N+LIN K
Sbjct: 319 FELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCK 378
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIG 326
+G+ EA ++ M + + + T N ++ YCR +EA ++ D + + V P V+
Sbjct: 379 SGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMT 438
Query: 327 YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMM 386
YN+ L + G + + + L+ M +RG D ++ TL + L + F EA+ + + ++
Sbjct: 439 YNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVL 498
Query: 387 FKGYAPLSKNLNAFVSELCQ 406
+G + LN +S LC+
Sbjct: 499 ARGLLTDTITLNVMISGLCK 518
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 143/328 (43%), Gaps = 37/328 (11%)
Query: 163 RGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVT 222
+G A ++D+M S V PD T +++ C + + +A +E LE V
Sbjct: 203 KGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVV 262
Query: 223 IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEM 282
Y +LI G IG++ R+ M ++G+ + Y +LI K G EEA V E +
Sbjct: 263 TYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELL 322
Query: 283 REGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKW 340
+E + V++ YCR +A R+ D + GV+ + N + CK G+
Sbjct: 323 KEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQL 382
Query: 341 SEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM--------------M 386
EA +F M PD TY TL DG CR EA+ + D+M +
Sbjct: 383 VEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNIL 442
Query: 387 FKGYAP--------------LSKNLNA-------FVSELCQEGNFELLSTVLSDLTSKGK 425
KGY+ L + +NA + L + G+F + ++ ++G
Sbjct: 443 LKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGL 502
Query: 426 ICNEGIWDVVLSMVCKPEKVPESFELLD 453
+ + +V++S +CK EKV E+ E+LD
Sbjct: 503 LTDTITLNVMISGLCKMEKVNEAKEILD 530
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 160/388 (41%), Gaps = 65/388 (16%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFD---AVTELAARAG 143
+I+ + + + A + ++ FRC+ ++++ L H AV E R G
Sbjct: 512 MISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKG 571
Query: 144 EFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLRE 203
F P YN LI + H ++ +L E+R+RG+ P AT+G LI
Sbjct: 572 IF--PTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALI----------- 618
Query: 204 AFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLI 263
G C IG + A+ EM++KG+ L+ + + +
Sbjct: 619 -------------------------TGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIA 653
Query: 264 NALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA--------YRILD 315
N+LF+ K +EA +L+++ V ++++ Y F EA +I +
Sbjct: 654 NSLFRLDKIDEACLLLQKI---------VDFDLLLPGYQSLKEFLEASATTCLKTQKIAE 704
Query: 316 GVEG------VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG-CAPDVVTYRTLFDG 368
VE + P+ I YNV + LCK GK +A LF D+ PD TY L G
Sbjct: 705 SVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHG 764
Query: 369 LCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICN 428
+A + DEM KG P NA + LC+ GN + +L L KG N
Sbjct: 765 CAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPN 824
Query: 429 EGIWDVVLSMVCKPEKVPESFELLDALV 456
++ ++ + K V E+ L + ++
Sbjct: 825 AITYNTLIDGLVKSGNVAEAMRLKEKMI 852
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 98/224 (43%), Gaps = 3/224 (1%)
Query: 235 GELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREG-GCEWNSVT 293
GE A + D+M+ + D + ++NA ++G ++A+ +E G E N VT
Sbjct: 204 GENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVT 263
Query: 294 CNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
N +I Y + E R+L + GV +V+ Y + CK+G EA +F +
Sbjct: 264 YNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLK 323
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
+ D Y L DG CR Q R+AV V D M+ G + N+ ++ C+ G
Sbjct: 324 EKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLV 383
Query: 412 LLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
+ S + + ++ ++ C+ V E+ +L D +
Sbjct: 384 EAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQM 427
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P+ TYN LI+ C G+ DRA L ++ +G+ P+ T+ TLI L ++ + EA L
Sbjct: 788 PNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRL 847
Query: 208 KEEMFREFKLEG 219
KE+M + + G
Sbjct: 848 KEKMIEKGLVRG 859
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 121 bits (304), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 189/448 (42%), Gaps = 52/448 (11%)
Query: 18 SQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRH 77
++ DPS L + + NH F SL LI + + EM+ + L + T
Sbjct: 110 TRDDPSKG--LLILRDCLRNHGAFPSSLTFCSLIYRFVEKG----EMDNAIEVLEMMTNK 163
Query: 78 RVPEPL---LCH-VITFYARARQPSRAVQTFLS-IPSFRCQRTLKSFNTLLHALLTCRQF 132
V P +C VI+ + + +P A+ F S + S L ++ TL+ AL +
Sbjct: 164 NVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKV 223
Query: 133 DAVTELAARAGEFGAPDACT-YNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTL 191
D V +L R + G C Y+ I G A EM +G+ D ++ L
Sbjct: 224 DEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSIL 283
Query: 192 IHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKG 251
I L + + EA L +M +E +E + YT +I+G+CK+G+L AF + + ++ G
Sbjct: 284 IDGLSKEGNVEEALGLLGKMIKE-GVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVG 342
Query: 252 LKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAY 311
+++D LY TLI+ + + G A +L +M + G + + +T N +I C EA
Sbjct: 343 IEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEAD 402
Query: 312 RILDGVEGVKPDVIGY-----------------------------------NVFLGWLCK 336
+ GV G DVI Y N+ L
Sbjct: 403 EVSKGVVG---DVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLL 459
Query: 337 EGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN 396
G + EA L+ MP PD TY T+ G C+ Q EA+ + +E+ K +
Sbjct: 460 MGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELR-KSSVSAAVC 518
Query: 397 LNAFVSELCQEGNFELLSTVLSDLTSKG 424
N + LC++G + + VL +L KG
Sbjct: 519 YNRIIDALCKKGMLDTATEVLIELWEKG 546
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 166/376 (44%), Gaps = 47/376 (12%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFGAP-DACTYNILIRASCLRGHADRAFELFDEM 176
+++TLL + + + DAV E+ R E P D NIL++A L G A L+ M
Sbjct: 414 TYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAM 473
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
+ PD AT+ T+I C+ ++ EA E+ E+ R+ + V Y +I +CK G
Sbjct: 474 PEMDLTPDTATYATMIKGYCKTGQIEEALEMFNEL-RKSSVSAAVC-YNRIIDALCKKGM 531
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
L A + E+ +KGL LD TL++++ G + L ++ + + NS C
Sbjct: 532 LDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQ----LNSDVCLG 587
Query: 297 MIGE----YCRENNFE---EAYRIL--DGVEGVKP------------------------- 322
M+ + C+ +FE E Y I+ G+ P
Sbjct: 588 MLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGE 647
Query: 323 ------DVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFR 376
DVI Y + + LCKEG +A++L RG + +TY +L +GLC+
Sbjct: 648 TTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLV 707
Query: 377 EAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVL 436
EA+ + D + G P + LC+EG F +L + SKG + N I++ ++
Sbjct: 708 EALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIV 767
Query: 437 SMVCKPEKVPESFELL 452
CK + ++ ++
Sbjct: 768 DGYCKLGQTEDAMRVV 783
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/350 (26%), Positives = 156/350 (44%), Gaps = 34/350 (9%)
Query: 120 NTLLHALL-TCRQFDAVTELAARAGE--FGAPDACTYNILIRASCLRGHADRAFELFDEM 176
+T+L L+ R DA L AGE + D Y I+I C G +A L
Sbjct: 623 STILKTLVDNLRSLDAYL-LVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFA 681
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
+SRGV + T+ +LI+ LC+ L EA L + + L Y LI +CK G
Sbjct: 682 KSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSL-ENIGLVPSEVTYGILIDNLCKEGL 740
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
A ++ D MV KGL + +YN++++ K G+ E+A+RV+ G ++ T +
Sbjct: 741 FLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSS 800
Query: 297 MIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
MI YC++ + EEA + + + D G+ + C +G+ EA L +M
Sbjct: 801 MIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSE 860
Query: 355 CAPDVV-----------TYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNA---- 399
++ + R LC + +A+ +LDE+ Y P KNL +
Sbjct: 861 SVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDEISSTIY-PSGKNLGSYQRL 919
Query: 400 -FVSELCQE--------GNFELLSTVLSDLTSKGKI--CNEGIWDVVLSM 438
F++++ +E +F L + +S L + GK+ NE + V+ M
Sbjct: 920 QFLNDVNEEEIKKKDYVHDFHSLHSTVSSLCTSGKLEQANEFVMSVLSCM 969
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/377 (21%), Positives = 142/377 (37%), Gaps = 76/377 (20%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
D Y LI C +G+ +RAF + +M RG++P T+ T+I+ LC R+ EA E+
Sbjct: 346 DEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVS 405
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
+ + G V Y+ L+ K+ + I+ ++ + +D + N L+ A
Sbjct: 406 KGVV------GDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLL 459
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV-EGVKPDVIGY 327
G EA + M E ++ T MI YC+ EEA + + + + + Y
Sbjct: 460 MGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVCY 519
Query: 328 NVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDG------------------- 368
N + LCK+G A ++ ++ +G D+ T RTL
Sbjct: 520 NRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQ 579
Query: 369 ----------------LCRWRQFREAVVVLDEMMFKGYA---------PLSKNLNAF--- 400
LC+ F A+ V M KG L NL +
Sbjct: 580 LNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAY 639
Query: 401 ----------------------VSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSM 438
++ LC+EG + S S+G N ++ +++
Sbjct: 640 LLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLING 699
Query: 439 VCKPEKVPESFELLDAL 455
+C+ + E+ L D+L
Sbjct: 700 LCQQGCLVEALRLFDSL 716
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 88/201 (43%), Gaps = 5/201 (2%)
Query: 261 TLINALFKAGKKEEALRVLEEMREGGCEW--NSVTCNVMIGEYCRENNFEEAYRILDGV- 317
+LI + G+ + A+ VLE M + ++ C+ +I +C+ E A +
Sbjct: 139 SLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAV 198
Query: 318 -EGV-KPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQF 375
GV P+++ Y + LC+ GK E DL + G D V Y G +
Sbjct: 199 DSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGAL 258
Query: 376 REAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVV 435
+A++ EM+ KG + + + L +EGN E +L + +G N + +
Sbjct: 259 VDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAI 318
Query: 436 LSMVCKPEKVPESFELLDALV 456
+ +CK K+ E+F L + ++
Sbjct: 319 IRGLCKMGKLEEAFVLFNRIL 339
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 166/381 (43%), Gaps = 22/381 (5%)
Query: 86 HVITFYARARQPSRAVQTF---LSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARA 142
H++ + S A++TF + P F R+ ++ L H L R+FD V +L
Sbjct: 45 HIVRLILDQKSASGALETFRWASTFPGFIHSRS--TYRALFHKLCVFRRFDTVYQLLDEM 102
Query: 143 GEFGA--PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSR 200
+ PD + +IR R + D + G++P F +++ L
Sbjct: 103 PDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVL----- 157
Query: 201 LREAFELKEEMFRE----FKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDA 256
++E ++ E F + G V Y L+KG+ + F++ M G+ +A
Sbjct: 158 VKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNA 217
Query: 257 ALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDG 316
+YNTL++AL K GK A ++ EM+E N VT N++I YC E ++ +L+
Sbjct: 218 VVYNTLLHALCKNGKVGRARSLMSEMKEP----NDVTFNILISAYCNEQKLIQSMVLLEK 273
Query: 317 V--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQ 374
G PDV+ + LC EG+ SEA+++ + +G DVV TL G C +
Sbjct: 274 CFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGK 333
Query: 375 FREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDV 434
R A EM KGY P + N ++ C G + +D+ + N ++
Sbjct: 334 MRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNT 393
Query: 435 VLSMVCKPEKVPESFELLDAL 455
++ + + + ++L+ +
Sbjct: 394 LIRGLSIGGRTDDGLKILEMM 414
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 144/343 (41%), Gaps = 14/343 (4%)
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRS 178
+NTLLHAL C+ V + E P+ T+NILI A C ++ L ++ S
Sbjct: 220 YNTLLHAL--CKN-GKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFS 276
Query: 179 RGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELS 238
G PD T ++ LC R+ EA E+ E + + V T L+KG C +G++
Sbjct: 277 LGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNT-LVKGYCALGKMR 335
Query: 239 WAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMI 298
A R EM +KG + YN LI G + AL +M+ WN T N +I
Sbjct: 336 VAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLI 395
Query: 299 GEYCRENNFEEAYRIL------DGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPR 352
++ +IL D V G + D YN + KE +W +A++ M +
Sbjct: 396 RGLSIGGRTDDGLKILEMMQDSDTVHGARID--PYNCVIYGFYKENRWEDALEFLLKMEK 453
Query: 353 RGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFEL 412
P V LC + D+M+ +G P + + Q G E
Sbjct: 454 --LFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEE 511
Query: 413 LSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
+++D+ ++G + ++ V+ CK +KV + ++ +
Sbjct: 512 SLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDM 554
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 152/341 (44%), Gaps = 39/341 (11%)
Query: 81 EPLLCHVITFYARARQPSRAVQTFLSIPSF-RCQRTLKSFNTLLHALLTCRQFDAVTELA 139
EP+ I Y RAR+ A+ F ++ + + +NT+++ + D
Sbjct: 157 EPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFY 216
Query: 140 ARAG-EFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCEN 198
R G E PD CT+NILI C D A +LF EM+ +G P+ +F TLI +
Sbjct: 217 QRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSS 276
Query: 199 SRLREAFELKEEMF-------------------REFKLEGCVTI---------------Y 224
++ E ++ EM RE +++ + Y
Sbjct: 277 GKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDY 336
Query: 225 TNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMRE 284
+L++ +C + A + +E+ KKG TL+ L K+G+ E+A +E+M
Sbjct: 337 GSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMN 396
Query: 285 GGCEWNSVTCNVMIGEYCRENNFEEA--YRILDGVEGVKPDVIGYNVFLGWLCKEGKWSE 342
G +SVT N+++ + C ++ +A R+L +G +PD Y+V + KEG+ E
Sbjct: 397 AGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKE 456
Query: 343 AMDLFHDMPRRGCAPDVVTYRTLFDGL-CRWRQFREAVVVL 382
L ++M + PD+ TY L DGL C + R+ V +L
Sbjct: 457 GEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRKQVRML 497
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 151/330 (45%), Gaps = 5/330 (1%)
Query: 131 QFDAVTELAARAGEFGAPD-ACTYNILIRASCLRGHADRAFELFDEM-RSRGVRPDQATF 188
F A +G F P+ + I A C D A FD M R +P+ +
Sbjct: 137 SFVAANPCPCSSGIFSCPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVY 196
Query: 189 GTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMV 248
T+++ ++ + +A + M +E + + V + LI G C+ + A + EM
Sbjct: 197 NTVVNGYVKSGDMDKALRFYQRMGKE-RAKPDVCTFNILINGYCRSSKFDLALDLFREMK 255
Query: 249 KKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFE 308
+KG + + +NTLI +GK EE +++ EM E GC ++ TC +++ CRE +
Sbjct: 256 EKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVD 315
Query: 309 EAYR-ILDGVEG-VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLF 366
+A +LD + V P Y + LC E K AM++ ++ ++G P + TL
Sbjct: 316 DACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLV 375
Query: 367 DGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKI 426
+GL + + +A +++MM G P S N + +LC + + + +SKG
Sbjct: 376 EGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYE 435
Query: 427 CNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+E + V++S K + E L++ ++
Sbjct: 436 PDETTYHVLVSGFTKEGRRKEGEVLVNEML 465
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/443 (23%), Positives = 181/443 (40%), Gaps = 59/443 (13%)
Query: 63 EMEQVLH-QLHLDTRHRVPEPLLCH-VITFYARARQPSRAVQTFLS------IPSFRCQR 114
EME+ + + + + P +L H +I +A P A++ F F C +
Sbjct: 395 EMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNK 454
Query: 115 TLKSFNTLLHALLTCRQ--FDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFE 171
LL C+Q DA T + G P+ YN ++ A C + D A
Sbjct: 455 IF---------LLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARS 505
Query: 172 LFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGV 231
+F EM +G+ P+ T+ LI +N + A+++ +M E IY +I G+
Sbjct: 506 IFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQM-NASNFEANEVIYNTIINGL 564
Query: 232 CKIGELSWAFRIKDEMVK-KGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWN 290
CK+G+ S A + ++K K + YN++I+ K G + A+ EM E G N
Sbjct: 565 CKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPN 624
Query: 291 SVT-----------------------------------CNVMIGEYCRENNFEEAYRILD 315
VT +I +C++N+ + AY +
Sbjct: 625 VVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFS 684
Query: 316 GVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWR 373
+ G+ P+V YN + GK A+DL+ M G + D+ TY T+ DGL +
Sbjct: 685 ELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDG 744
Query: 374 QFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWD 433
A + E++ G P V+ L ++G F S +L ++ K N ++
Sbjct: 745 NINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYS 804
Query: 434 VVLSMVCKPEKVPESFELLDALV 456
V++ + + E+F L D ++
Sbjct: 805 TVIAGHHREGNLNEAFRLHDEML 827
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 137/288 (47%), Gaps = 5/288 (1%)
Query: 119 FNTLLHALLTCRQFDAVTELAAR-AGEFGAPDACT-YNILIRASCLRGHADRAFELFDEM 176
+NT+++ L Q E+ E +CT YN +I G D A E + EM
Sbjct: 557 YNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREM 616
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
G P+ TF +LI+ C+++R+ A E+ EM + +L+ + Y LI G CK +
Sbjct: 617 SENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEM-KSMELKLDLPAYGALIDGFCKKND 675
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
+ A+ + E+ + GL + ++YN+LI+ GK + A+ + ++M G + T
Sbjct: 676 MKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTT 735
Query: 297 MIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
MI ++ N A + + G+ PD I + V + L K+G++ +A + +M ++
Sbjct: 736 MIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKD 795
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVS 402
P+V+ Y T+ G R EA + DEM+ KG N VS
Sbjct: 796 VTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS 843
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 166/408 (40%), Gaps = 37/408 (9%)
Query: 86 HVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEF 145
+++ Y R ++ AV F + + + N +L +L+ D E+ +
Sbjct: 174 YLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLI 233
Query: 146 G-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREA 204
G A D T +L+RAS + A ++F + SRG PD F + C+ L A
Sbjct: 234 GVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMA 293
Query: 205 FELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLIN 264
+L EM + + YT++I K G + A R+ DEMV G+ + +L+N
Sbjct: 294 LDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVN 353
Query: 265 ALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA---YRILDGVEGVK 321
K + +AL + M E G + V +VM+ +C+ E+A Y + V
Sbjct: 354 GYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAP 413
Query: 322 PDVIGYNVFLG--------------------WL-------------CKEGKWSEAMDLFH 348
V+ + + G W+ CK+GK A
Sbjct: 414 SSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLK 473
Query: 349 DMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEG 408
M ++G P+VV Y + CR + A + EM+ KG P + + + +
Sbjct: 474 MMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNK 533
Query: 409 NFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ + V++ + + NE I++ +++ +CK + ++ E+L L+
Sbjct: 534 DEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLI 581
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 148/327 (45%), Gaps = 6/327 (1%)
Query: 46 LSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFL 105
+Y ++I + K V++Q++ + E + +I + Q S+A +
Sbjct: 520 FTYSILIDGFFKNKDEQNAWDVINQMNA-SNFEANEVIYNTIINGLCKVGQTSKAKEMLQ 578
Query: 106 S-IPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLR 163
+ I R + S+N+++ + D+ E E G +P+ T+ LI C
Sbjct: 579 NLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKS 638
Query: 164 GHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTI 223
D A E+ EM+S ++ D +G LI C+ + ++ A+ L E+ E L V++
Sbjct: 639 NRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSEL-PELGLMPNVSV 697
Query: 224 YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMR 283
Y +LI G +G++ A + +MV G+ D Y T+I+ L K G A + E+
Sbjct: 698 YNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELL 757
Query: 284 EGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWS 341
+ G + + V++ ++ F +A ++L+ ++ V P+V+ Y+ + +EG +
Sbjct: 758 DLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLN 817
Query: 342 EAMDLFHDMPRRGCAPDVVTYRTLFDG 368
EA L +M +G D + L G
Sbjct: 818 EAFRLHDEMLEKGIVHDDTVFNLLVSG 844
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 157/345 (45%), Gaps = 41/345 (11%)
Query: 115 TLKSFNTLLHALLTCRQFDAV----TELAARAGEFGAPDACTYNILIRASCLRGHADRAF 170
+++ + +++ L RQF AV E+ + P+ + +L++ +A
Sbjct: 146 SIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPE--LFVVLVQRFASADMVKKAI 203
Query: 171 ELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKG 230
E+ DEM G PD+ FG L+ LC++ +++A +L E+M F + + +T+L+ G
Sbjct: 204 EVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVN--LRYFTSLLYG 261
Query: 231 VCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWN 290
C++G++ A + +M + G + D Y L++ AGK +A +L +MR G E
Sbjct: 262 WCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFE-- 319
Query: 291 SVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM 350
P+ Y V + LCK + EAM +F +M
Sbjct: 320 -------------------------------PNANCYTVLIQALCKVDRMEEAMKVFVEM 348
Query: 351 PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNF 410
R C DVVTY L G C+W + + +VLD+M+ KG P + ++ +F
Sbjct: 349 ERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESF 408
Query: 411 ELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
E ++ + + GI++VV+ + CK +V E+ L + +
Sbjct: 409 EECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEM 453
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 129/264 (48%), Gaps = 3/264 (1%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
+P+ TY+ LI C G A EM S+ + P+ TF LI + +L +
Sbjct: 80 SPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDS 139
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
+ + M + ++ V Y++LI G+C + A ++ D M+ KG + Y+TL N
Sbjct: 140 VYKMMI-QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGF 198
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDV 324
FK+ + ++ +++L++M + G N+V+CN +I Y + + A + + G+ P++
Sbjct: 199 FKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNI 258
Query: 325 IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDE 384
YN+ L L G+ +A+ F M + D++TY + G+C+ +EA + +
Sbjct: 259 RSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYK 318
Query: 385 MMFKGYAPLSKNLNAFVSELCQEG 408
+ FK P K ++EL + G
Sbjct: 319 LKFKRVEPDFKAYTIMIAELNRAG 342
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 131/266 (49%), Gaps = 5/266 (1%)
Query: 175 EMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKI 234
+M G+ PD T +L++ C ++ +++A + +M + ++ V + T LI +CK
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQM-EKMGIKRDVVVDTILIDTLCKN 61
Query: 235 GELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTC 294
+ A + M +G+ + Y++LI L K+G+ +A R L EM N +T
Sbjct: 62 RLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITF 121
Query: 295 NVMIGEYCRENNF---EEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
+ +I Y + + Y+++ + + P+V Y+ + LC + EA+ + M
Sbjct: 122 SALIDAYAKRGKLSKVDSVYKMMIQMS-IDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
+GC P+VVTY TL +G + + + + +LD+M +G A + + N + Q G +
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240
Query: 412 LLSTVLSDLTSKGKICNEGIWDVVLS 437
L V +TS G I N +++VL+
Sbjct: 241 LALGVFGYMTSNGLIPNIRSYNIVLA 266
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 139/307 (45%), Gaps = 3/307 (0%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD T + L+ CL A + +M G++ D LI LC+N + A E+
Sbjct: 11 PDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEV 70
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+ M ++ + V Y++LI G+CK G L+ A R EM K + + ++ LI+A
Sbjct: 71 LKRM-KDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYA 129
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVI 325
K GK + V + M + + N T + +I C N +EA ++LD + +G P+V+
Sbjct: 130 KRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVV 189
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
Y+ K + + + L DMP+RG A + V+ TL G + + A+ V M
Sbjct: 190 TYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYM 249
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKV 445
G P ++ N ++ L G E + + + + +++ +CK V
Sbjct: 250 TSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMV 309
Query: 446 PESFELL 452
E+++L
Sbjct: 310 KEAYDLF 316
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 141/307 (45%), Gaps = 38/307 (12%)
Query: 39 RPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPS 98
R ++++Y +IT L ++ L + E+ LH+ +D++ P +VITF A
Sbjct: 77 RGISPNVVTYSSLITGLCKSGRLADAERRLHE--MDSKKINP-----NVITFSAL----- 124
Query: 99 RAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIR 158
I ++ + L ++ ++ ++ D P+ TY+ LI
Sbjct: 125 --------IDAYAKRGKLSKVDS-VYKMMIQMSID--------------PNVFTYSSLIY 161
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
C+ D A ++ D M S+G P+ T+ TL + ++SR+ + +L ++M +
Sbjct: 162 GLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAA 221
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
V+ T LIKG + G++ A + M GL + YN ++ LF G+ E+AL
Sbjct: 222 NTVSCNT-LIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSR 280
Query: 279 LEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCK 336
E M++ + + +T +MI C+ +EAY + + + V+PD Y + + L +
Sbjct: 281 FEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNR 340
Query: 337 EGKWSEA 343
G +EA
Sbjct: 341 AGMRTEA 347
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/212 (21%), Positives = 97/212 (45%), Gaps = 2/212 (0%)
Query: 246 EMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCREN 305
+M+K G++ D ++L+N + ++A+ V +M + G + + V ++I C+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 306 NFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYR 363
A +L ++ G+ P+V+ Y+ + LCK G+ ++A H+M + P+V+T+
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 364 TLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSK 423
L D + + + V M+ P ++ + LC + +L + SK
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 424 GKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
G N + + + K +V + +LLD +
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDM 214
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 155/372 (41%), Gaps = 4/372 (1%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
++ FY R RA +TF + + T + + +L+HA R D + E G
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEG 374
Query: 147 AP-DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
TY++++ GHA+ A FDE + + + +G +I+ C+ + A
Sbjct: 375 IEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAE 434
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
L EM E ++ + IY ++ G + + + + + G Y LIN
Sbjct: 435 ALVREMEEE-GIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINL 493
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPD 323
K GK +AL V M+E G + N T ++MI + + ++ A+ + + + EG+KPD
Sbjct: 494 YTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPD 553
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
VI YN + C G A+ +M + P T+ + G + R ++ V D
Sbjct: 554 VILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFD 613
Query: 384 EMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPE 443
M G P N ++ L ++ E +L ++T G NE + ++
Sbjct: 614 MMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVG 673
Query: 444 KVPESFELLDAL 455
++FE L
Sbjct: 674 DTGKAFEYFTRL 685
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 146/343 (42%), Gaps = 37/343 (10%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQF-DAVTELAARAGEF 145
+I Y + + S+A++ + + LK+++ +++ + + + +A E
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 146 GAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
PD YN +I A C G+ DRA + EM+ RP TF +IH ++ +R +
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 609
Query: 206 ELKEEMFR-------------------EFKLEGCVTI---------------YTNLIKGV 231
E+ + M R + ++E V I YT +++G
Sbjct: 610 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 669
Query: 232 CKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNS 291
+G+ AF + +GL +D Y L+ A K+G+ + AL V +EM NS
Sbjct: 670 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 729
Query: 292 VTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHD 349
N++I + R + EA ++ + EGVKPD+ Y F+ K G + A +
Sbjct: 730 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 789
Query: 350 MPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
M G P++ TY TL G R +A+ +EM G P
Sbjct: 790 MEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKP 832
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 118/266 (44%), Gaps = 3/266 (1%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P + ++++ RG RA E F+ MR+RG+ P + +LIH + EA
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+M +E +E + Y+ ++ G K G A DE + L+A++Y +I A
Sbjct: 367 VRKM-KEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHC 425
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVI 325
+ E A ++ EM E G + + M+ Y + ++ + ++ G P V+
Sbjct: 426 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVV 485
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
Y + K GK S+A+++ M G ++ TY + +G + + + A V ++M
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFE 411
+ +G P N +S C GN +
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMD 571
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 118 bits (296), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 146/326 (44%), Gaps = 3/326 (0%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMR 177
S+N L+ +L + A + PD T+NI++ + +G ++ +L+D+M+
Sbjct: 541 SYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMK 600
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGEL 237
S G++P + ++ LCEN ++ EA + +M ++ +T Y + K
Sbjct: 601 SCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMML-MEIHPNLTTYRIFLDTSSKHKRA 659
Query: 238 SWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVM 297
F+ + ++ G+KL +YNTLI L K G ++A V+ +M G ++VT N +
Sbjct: 660 DAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSL 719
Query: 298 IGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGC 355
+ Y ++ +A + G+ P+V YN + L G E +M RG
Sbjct: 720 MHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGM 779
Query: 356 APDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLST 415
PD TY L G + + ++ + EM+ G P + N +SE G
Sbjct: 780 RPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARE 839
Query: 416 VLSDLTSKGKICNEGIWDVVLSMVCK 441
+L ++ +G N + ++S +CK
Sbjct: 840 LLKEMGKRGVSPNTSTYCTMISGLCK 865
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 164/394 (41%), Gaps = 43/394 (10%)
Query: 90 FYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHAL-LTCRQFDAVTELAARAGEFG-A 147
Y AR S A+ TF +P R +N+L+H + D V+ + ++ G +
Sbjct: 74 LYGAARTLS-AMCTFGVVPDSRL------WNSLIHQFNVNGLVHDQVSLIYSKMIACGVS 126
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD N+LI + C G A L +R+R + D T+ T+I LCE+ EA++
Sbjct: 127 PDVFALNVLIHSFCKVGRLSFAISL---LRNRVISIDTVTYNTVISGLCEHGLADEAYQF 183
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDE--------------------- 246
EM + L V+ Y LI G CK+G A + DE
Sbjct: 184 LSEMVKMGILPDTVS-YNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHA 242
Query: 247 -------MVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIG 299
MV G D ++++IN L K GK E +L EM E N VT ++
Sbjct: 243 IEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVD 302
Query: 300 EYCRENNFEEAYRILDG--VEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAP 357
+ N + A + V G+ D++ Y V + L K G EA F + P
Sbjct: 303 SLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVP 362
Query: 358 DVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVL 417
+VVTY L DGLC+ A ++ +M+ K P ++ ++ ++G E ++L
Sbjct: 363 NVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLL 422
Query: 418 SDLTSKGKICNEGIWDVVLSMVCKPEKVPESFEL 451
+ + + N + V+ + K K + EL
Sbjct: 423 RKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 456
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 152/371 (40%), Gaps = 46/371 (12%)
Query: 119 FNTLLHALLTC-RQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHA-DRAFELFDEM 176
F+TL L+C R + A L+A PD+ +N LI + G D+ ++ +M
Sbjct: 61 FHTLFRLYLSCERLYGAARTLSAMCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKM 120
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
+ GV PD LIH C+ RL A L R + Y +I G+C+ G
Sbjct: 121 IACGVSPDVFALNVLIHSFCKVGRLSFAISL----LRNRVISIDTVTYNTVISGLCEHGL 176
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
A++ EMVK G+ D YNTLI+ K G A +++E+ E N +T +
Sbjct: 177 ADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI----SELNLITHTI 232
Query: 297 MIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGK----------------- 339
++ Y + EEAYR + + G PDV+ ++ + LCK GK
Sbjct: 233 LLSSYYNLHAIEEAYRDMV-MSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVY 291
Query: 340 ------------------WSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVV 381
+ A+ L+ M RG D+V Y L DGL + REA
Sbjct: 292 PNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKT 351
Query: 382 LDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCK 441
++ P A V LC+ G+ +++ + K I N + +++ K
Sbjct: 352 FKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVK 411
Query: 442 PEKVPESFELL 452
+ E+ LL
Sbjct: 412 KGMLEEAVSLL 422
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 146/338 (43%), Gaps = 32/338 (9%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDE- 175
++NT++ L D + + + G PD +YN LI C G+ RA L DE
Sbjct: 163 TYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI 222
Query: 176 ---------------------------MRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
M G PD TF ++I+RLC+ ++ E L
Sbjct: 223 SELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLL 282
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
EM E + YT L+ + K A + +MV +G+ +D +Y L++ LFK
Sbjct: 283 REM-EEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFK 341
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIG 326
AG EA + + + E N VT ++ C+ + A I+ + + V P+V+
Sbjct: 342 AGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVT 401
Query: 327 YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMM 386
Y+ + K+G EA+ L M + P+ TY T+ DGL + + A+ + EM
Sbjct: 402 YSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMR 461
Query: 387 FKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
G + L+A V+ L + G + + ++ D+ SKG
Sbjct: 462 LIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKG 499
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 145/316 (45%), Gaps = 39/316 (12%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P+ TY+ +I +G + A L +M + V P+ T+GT+I L + + A EL
Sbjct: 397 PNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIEL 456
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+EM R +E I L+ + +IG + + +MV KG+ LD Y +LI+ F
Sbjct: 457 SKEM-RLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFF 515
Query: 268 KAGKKEEALRVLEEMREGGCEWNSV----------------------------------T 293
K G +E AL EEM+E G W+ V T
Sbjct: 516 KGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIAT 575
Query: 294 CNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
N+M+ ++ + E ++ D ++ G+KP ++ N+ +G LC+ GK EA+ + + M
Sbjct: 576 FNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMM 635
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNL-NAFVSELCQEGNF 410
P++ TYR D + ++ +A+ E + LS+ + N ++ LC+ G
Sbjct: 636 LMEIHPNLTTYRIFLDTSSKHKR-ADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMT 694
Query: 411 ELLSTVLSDLTSKGKI 426
+ + V+ D+ ++G I
Sbjct: 695 KKAAMVMGDMEARGFI 710
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 171/396 (43%), Gaps = 46/396 (11%)
Query: 88 ITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG- 146
+ R Q S A + IP ++++ T+LHA +++ +L R E G
Sbjct: 182 VRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGP 241
Query: 147 APDACTYNILIRASCLRGHADRA-FELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
+P TYN+++ G + R + DEMRS+G++ D+ T T++ LREA
Sbjct: 242 SPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREA- 300
Query: 206 ELKEEMFREFK---LEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTL 262
+E F E K E Y L++ K G + A + EM + D+ YN L
Sbjct: 301 ---KEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNEL 357
Query: 263 INALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GV 320
+ A +AG +EA V+E M + G N++T +I Y + +EA ++ ++ G
Sbjct: 358 VAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGC 417
Query: 321 KPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLF-----DGLCRW--R 373
P+ YN L L K+ + +E + + DM GC+P+ T+ T+ G+ ++ R
Sbjct: 418 VPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNR 477
Query: 374 QFRE----------------------------AVVVLDEMMFKGYAPLSKNLNAFVSELC 405
FRE A + EM G+ NA ++ L
Sbjct: 478 VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALA 537
Query: 406 QEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCK 441
++G++ V+SD+ SKG E + ++L K
Sbjct: 538 RKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAK 573
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/449 (22%), Positives = 182/449 (40%), Gaps = 42/449 (9%)
Query: 46 LSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPL-LCHVITFYARARQPSRAVQTF 104
++Y+ ++ RA E V+ + + +P + VI Y +A + A++ F
Sbjct: 352 VTYNELVAAYVRAGFSKEAAGVIEMM--TKKGVMPNAITYTTVIDAYGKAGKEDEALKLF 409
Query: 105 LSIPSFRCQRTLKSFNTLLHAL-LTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLR 163
S+ C ++N +L L R + + L +P+ T+N ++ +
Sbjct: 410 YSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNK 469
Query: 164 GHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTI 223
G +F EM+S G PD+ TF TLI +A ++ EM R CVT
Sbjct: 470 GMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRA-GFNACVTT 528
Query: 224 YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMR 283
Y L+ + + G+ + +M KG K Y+ ++ K G R+ ++
Sbjct: 529 YNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIK 588
Query: 284 EG-----------------------------------GCEWNSVTCNVMIGEYCRENNFE 308
EG G + + V N M+ + R N ++
Sbjct: 589 EGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYD 648
Query: 309 EAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLF 366
+A IL+ + +G+ PD++ YN + + G+ +A ++ + + PD+V+Y T+
Sbjct: 649 QAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVI 708
Query: 367 DGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKI 426
G CR +EAV +L EM +G P N FVS G F + V+ +
Sbjct: 709 KGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCR 768
Query: 427 CNEGIWDVVLSMVCKPEKVPESFELLDAL 455
NE + +V+ C+ K E+ + + +
Sbjct: 769 PNELTFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 130/297 (43%), Gaps = 10/297 (3%)
Query: 164 GHADRAFELFDEM----RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM-FREFKLE 218
GH +RA LF+ + S ++ D + L S+ A +L +++ +E+ L+
Sbjct: 150 GHWERAVFLFEWLVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLD 209
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKK-EEALR 277
V YT ++ + G+ A + + M + G YN +++ K G+ + L
Sbjct: 210 --VRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILG 267
Query: 278 VLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLC 335
VL+EMR G +++ TC+ ++ RE EA ++ G +P + YN L
Sbjct: 268 VLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 336 KEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSK 395
K G ++EA+ + +M C D VTY L R +EA V++ M KG P +
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 396 NLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+ + G + + + G + N ++ VLS++ K + E ++L
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKML 444
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 89/203 (43%), Gaps = 2/203 (0%)
Query: 121 TLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRSR 179
TLL A CR + G PD +N ++ D+A + + +R
Sbjct: 601 TLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRED 660
Query: 180 GVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSW 239
G+ PD T+ +L+ +A E+ + + + +L+ + Y +IKG C+ G +
Sbjct: 661 GLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS-QLKPDLVSYNTVIKGFCRRGLMQE 719
Query: 240 AFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIG 299
A R+ EM ++G++ YNT ++ G E V+E M + C N +T +++
Sbjct: 720 AVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVD 779
Query: 300 EYCRENNFEEAYRILDGVEGVKP 322
YCR + EA + ++ P
Sbjct: 780 GYCRAGKYSEAMDFVSKIKTFDP 802
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 127/282 (45%), Gaps = 10/282 (3%)
Query: 153 YNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMF 212
YN L+ + G + L+ EM V PD TF TL++ C+ + EA + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 213 REFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKA 269
+ GC YT+ I G C+ E+ AF++ EM + G + Y LI LF+A
Sbjct: 183 QA----GCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEA 238
Query: 270 GKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGY 327
K +EAL +L +M++ C N T V+I C EA + + G+KPD Y
Sbjct: 239 KKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMY 298
Query: 328 NVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMF 387
V + C EA L M G P+V+TY L G C+ + +A+ +L +M+
Sbjct: 299 TVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLE 357
Query: 388 KGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNE 429
+ P N ++ C GN + +LS + G + N+
Sbjct: 358 QNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQ 399
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 173/396 (43%), Gaps = 35/396 (8%)
Query: 8 SPFRLSSLLRSQKDPSVA--FQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEME 65
+P +SSL DP A F +++ P F+H++ SY ++T L ++ E+
Sbjct: 26 TPSHVSSLFSLNLDPQTALSFSDWISRIPN-----FKHNVTSYASLVTLLCSQEIPYEVP 80
Query: 66 QVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHA 125
++ L + + + V + L V+ F R+ + + T K +N LL +
Sbjct: 81 KI-TILMIKSCNSVRDALF--VVDFCRTMRKGDSF--------EIKYKLTPKCYNNLLSS 129
Query: 126 LLTCRQFDAVTELAARAGE----FGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGV 181
L +F V E+ E +PD T+N L+ C G+ A + + G
Sbjct: 130 L---ARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGC 186
Query: 182 RPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC---VTIYTNLIKGVCKIGELS 238
PD T+ + I C + AF++ F+E GC YT LI G+ + ++
Sbjct: 187 DPDYFTYTSFITGHCRRKEVDAAFKV----FKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 239 WAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMI 298
A + +M + Y LI+AL +G+K EA+ + ++M E G + + V+I
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 299 GEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCA 356
+C + +EA +L+ + G+ P+VI YN + CK+ +AM L M +
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLV 361
Query: 357 PDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
PD++TY TL G C A +L M G P
Sbjct: 362 PDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVP 397
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 101/216 (46%), Gaps = 10/216 (4%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD TY I C R D AF++F EM G ++ ++ LI+ L E ++ EA L
Sbjct: 188 PDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSL 247
Query: 208 KEEMFREFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLIN 264
+M K + C V YT LI +C G+ S A + +M + G+K D +Y LI
Sbjct: 248 LVKM----KDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQ 303
Query: 265 ALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKP 322
+ +EA +LE M E G N +T N +I +C++ N +A +L + + + P
Sbjct: 304 SFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKK-NVHKAMGLLSKMLEQNLVP 362
Query: 323 DVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPD 358
D+I YN + C G A L M G P+
Sbjct: 363 DLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPN 398
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 112/264 (42%), Gaps = 11/264 (4%)
Query: 195 LCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKL 254
C R ++FE+K ++ + Y NL+ + + G + R+ EM++ +
Sbjct: 102 FCRTMRKGDSFEIKYKLTPK--------CYNNLLSSLARFGLVEEMKRLYTEMLEDLVSP 153
Query: 255 DAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRIL 314
D +NTL+N K G EA + + + + GC+ + T I +CR + A+++
Sbjct: 154 DIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVF 213
Query: 315 DGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRW 372
+ G + + Y + L + K EA+ L M C P+V TY L D LC
Sbjct: 214 KEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGS 273
Query: 373 RQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIW 432
Q EA+ + +M G P + C + S +L + G + N +
Sbjct: 274 GQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITY 333
Query: 433 DVVLSMVCKPEKVPESFELLDALV 456
+ ++ CK + V ++ LL ++
Sbjct: 334 NALIKGFCK-KNVHKAMGLLSKML 356
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 118/243 (48%), Gaps = 3/243 (1%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
D+ YN++IR C G+ A+ +M RGV PD T+ TLI LC+ + EA +L
Sbjct: 299 DSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLH 358
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
M ++ Y +I+G+C G+++ A M+K L + L+N +I+ +
Sbjct: 359 GTMQNGGVAPDQIS-YKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGR 417
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVK--PDVIG 326
G AL VL M G + N T N +I Y + +A+ + + + K PD
Sbjct: 418 YGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTT 477
Query: 327 YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMM 386
YN+ LG C G A L+ +M RRGC PD++TY L GLC + ++A +L +
Sbjct: 478 YNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQ 537
Query: 387 FKG 389
G
Sbjct: 538 ATG 540
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/386 (24%), Positives = 155/386 (40%), Gaps = 78/386 (20%)
Query: 116 LKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFD 174
L + N LL+ L + L E G +P+ +YN LI+ C + D+A LF+
Sbjct: 156 LITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFN 215
Query: 175 EMRSRGVRPDQATFGTLIHRLCE------------------------------------- 197
M G+RP++ T ++H LC+
Sbjct: 216 TMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSC 275
Query: 198 --NSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLD 255
N + +A E+ +EM ++ + +Y +I+G+C G + A+ +MVK+G+ D
Sbjct: 276 FKNGNVVQALEVWKEMSQK-NVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPD 334
Query: 256 AALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMI------GEYCRENNFEE 309
YNTLI+AL K GK +EA + M+ GG + ++ V+I G+ R N F
Sbjct: 335 VFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLL 394
Query: 310 AYR-------------ILDGVE------------------GVKPDVIGYNVFLGWLCKEG 338
+ ++DG GVKP+V N + K G
Sbjct: 395 SMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGG 454
Query: 339 KWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLN 398
+ +A + ++M PD TY L C R A + DEM+ +G P
Sbjct: 455 RLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYT 514
Query: 399 AFVSELCQEGNFELLSTVLSDLTSKG 424
V LC +G + ++LS + + G
Sbjct: 515 ELVRGLCWKGRLKKAESLLSRIQATG 540
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 117/260 (45%), Gaps = 7/260 (2%)
Query: 156 LIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREF 215
++R CL+G D A L +M GV P T L++ LC+ + +A L EM
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 216 KLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAG----K 271
CV+ Y LIKG+C + + A + + M K G++ + N +++AL + G
Sbjct: 187 PSPNCVS-YNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNN 245
Query: 272 KEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNV 329
++ L + + + + V C +++ + N +A + + + V D + YNV
Sbjct: 246 NKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNV 305
Query: 330 FLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKG 389
+ LC G A DM +RG PDV TY TL LC+ +F EA + M G
Sbjct: 306 IIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGG 365
Query: 390 YAPLSKNLNAFVSELCQEGN 409
AP + + LC G+
Sbjct: 366 VAPDQISYKVIIQGLCIHGD 385
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 112/236 (47%), Gaps = 3/236 (1%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD TYN LI A C G D A +L M++ GV PDQ ++ +I LC + + A E
Sbjct: 333 PDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEF 392
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
M + L V ++ +I G + G+ S A + + M+ G+K + N LI+
Sbjct: 393 LLSMLKSSLLPE-VLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYV 451
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVI 325
K G+ +A V EMR ++ T N+++G C + A+++ D + G +PD+I
Sbjct: 452 KGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDII 511
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVV 381
Y + LC +G+ +A L + G D V + L R ++ EA +V
Sbjct: 512 TYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEAYLV 567
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 124/268 (46%), Gaps = 7/268 (2%)
Query: 190 TLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVK 249
+++ LC +L A L+++M + G +T + +L+ G+CK G + A + EM +
Sbjct: 126 SIMRDLCLQGKLDAALWLRKKMIYSGVIPGLIT-HNHLLNGLCKAGYIEKADGLVREMRE 184
Query: 250 KGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRE----- 304
G + YNTLI L ++AL + M + G N VTCN+++ C++
Sbjct: 185 MGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGN 244
Query: 305 NNFEEAYRILDGVEGVKP-DVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYR 363
NN + ILD + P D++ + + K G +A++++ +M ++ D V Y
Sbjct: 245 NNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYN 304
Query: 364 TLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSK 423
+ GLC A + +M+ +G P N +S LC+EG F+ + + +
Sbjct: 305 VIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNG 364
Query: 424 GKICNEGIWDVVLSMVCKPEKVPESFEL 451
G ++ + V++ +C V + E
Sbjct: 365 GVAPDQISYKVIIQGLCIHGDVNRANEF 392
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 135/288 (46%), Gaps = 11/288 (3%)
Query: 173 FDEMRSRGVRPD-QATFGTLIHRLCENSRLREAFELKEEM--FREFKLEGCVTIYTNLIK 229
F + + + D +A F L + L S L L+E + + F + C++I++++++
Sbjct: 72 FSDQKDYDQKEDPEAIFNVLDYIL--KSSLDRLASLRESVCQTKSFDYDDCLSIHSSIMR 129
Query: 230 GVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEW 289
+C G+L A ++ +M+ G+ +N L+N L KAG E+A ++ EMRE G
Sbjct: 130 DLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSP 189
Query: 290 NSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEG----KWSEA 343
N V+ N +I C NN ++A + + + G++P+ + N+ + LC++G +
Sbjct: 190 NCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKL 249
Query: 344 MDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSE 403
++ D + D+V L D + +A+ V EM K S N +
Sbjct: 250 LEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRG 309
Query: 404 LCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFEL 451
LC GN + D+ +G + ++ ++S +CK K E+ +L
Sbjct: 310 LCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDL 357
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Query: 80 PEPLLCHV-ITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTC-RQFDAVTE 137
PE LL +V I Y R S A+ + S+ + + + N L+H + R DA
Sbjct: 403 PEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWV 462
Query: 138 LAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCE 197
PD TYN+L+ A+C GH AF+L+DEM RG +PD T+ L+ LC
Sbjct: 463 KNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCW 522
Query: 198 NSRLREAFEL 207
RL++A L
Sbjct: 523 KGRLKKAESL 532
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P+ T N LI G A+ + +EMRS + PD T+ L+ C LR AF+L
Sbjct: 438 PNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQL 497
Query: 208 KEEMFREFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLIN 264
+EM R GC + YT L++G+C G L A + + G+ +D + L
Sbjct: 498 YDEMLRR----GCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAK 553
Query: 265 ALFKAGKKEEALRVLEE 281
+ + EA V ++
Sbjct: 554 KYTRLQRPGEAYLVYKK 570
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 183/437 (41%), Gaps = 46/437 (10%)
Query: 5 KPISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEM 64
KP + + L R + D AF F+ Q + + S+ Y +I+ LG+ +
Sbjct: 124 KPSNELVVEILSRVRNDWETAFTFFVWAGKQ---QGYVRSVREYHSMISILGKMRKFDTA 180
Query: 65 EQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLH 124
++ ++ + V L +I Y +A+ TF + F+ + + F +LL
Sbjct: 181 WTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLS 240
Query: 125 ALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASC-LRGHADRAFELFDEMRSRGVRP 183
AL + L + DA ++NI++ C + G A ++ EM + GV+
Sbjct: 241 ALCRYKNVSDAGHLIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKH 300
Query: 184 DQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRI 243
D V Y+++I K G L+ ++
Sbjct: 301 D------------------------------------VVSYSSMISCYSKGGSLNKVLKL 324
Query: 244 KDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMRE-GGCEWNSVTCNVMIGEYC 302
D M K+ ++ D +YN +++AL KA EA +++ M E G E N VT N +I C
Sbjct: 325 FDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLC 384
Query: 303 RENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVV 360
+ EEA ++ D + +G+ P + Y+ F+ L + G+ E +L M + GC P V
Sbjct: 385 KARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTGE--EVFELLAKMRKMGCEPTVE 441
Query: 361 TYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDL 420
TY L LCRWR F +++ DEM K P + + L G E ++
Sbjct: 442 TYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEM 501
Query: 421 TSKGKICNEGIWDVVLS 437
KG NE + D++ S
Sbjct: 502 KDKGMRPNENVEDMIQS 518
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 171/370 (46%), Gaps = 30/370 (8%)
Query: 39 RPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITF------YA 92
R R +Y ++I +GR E + +++ + E L +V+ + A
Sbjct: 264 RHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEM-------ITEGLTLNVVGYNTLMQVLA 316
Query: 93 RARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQF---DAVTELAARAGEFGAPD 149
+ + +A+Q F + C+ +++ LL+ L+ Q D V E++ R G
Sbjct: 317 KGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG--- 373
Query: 150 ACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKE 209
Y+ L+R GH A LF +M S V+ ++ ++ +++ LC + EA E
Sbjct: 374 --IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIE--- 428
Query: 210 EMFREFKLEGCVT---IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
M + +G VT +Y + + K+ ++S + ++M K G D YN LI +
Sbjct: 429 -MLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASF 487
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDV 324
+ G+ +EA+ + EE+ C+ + ++ N +I + + +EA+ ++ G+ PDV
Sbjct: 488 GRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDV 547
Query: 325 IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDE 384
+ Y+ + K + A LF +M +GC P++VTY L D L + + EAV + +
Sbjct: 548 VTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSK 607
Query: 385 MMFKGYAPLS 394
M +G P S
Sbjct: 608 MKQQGLTPDS 617
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 104/407 (25%), Positives = 167/407 (41%), Gaps = 82/407 (20%)
Query: 91 YARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALL----TCRQFDAVTELAARAGEFG 146
Y R+R S+A + I + + ++N LL AL C+ F+ + + R E+
Sbjct: 213 YLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKACQVFEDMKKRHCRRDEY- 271
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
TY I+IR G D A LF+EM + G+ + + TL+ L + + +A +
Sbjct: 272 -----TYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQ 326
Query: 207 LKEEMFRE----------------------FKLEGCVTI---------YTNLIKGVCKIG 235
+ M +L+G V I Y+ L++ + K+G
Sbjct: 327 VFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLG 386
Query: 236 ELS---------WAFRIKDE--------------------------MVKKGLKLDAALYN 260
+S W+F +K E + +KG+ D +YN
Sbjct: 387 HVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYN 446
Query: 261 TLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE-- 318
T+ +AL K + + E+M++ G + T N++I + R +EA I + +E
Sbjct: 447 TVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERS 506
Query: 319 GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREA 378
KPD+I YN + L K G EA F +M +G PDVVTY TL + + + A
Sbjct: 507 DCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMA 566
Query: 379 VVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGK 425
+ +EM+ KG P N + C E N V DL SK K
Sbjct: 567 YSLFEEMLVKGCQPNIVTYNILLD--CLEKNGRTAEAV--DLYSKMK 609
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 153/377 (40%), Gaps = 51/377 (13%)
Query: 116 LKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYN---ILIRASCLRGHADRAFEL 172
LKS N+ LL F V L + D YN +++ S L DR +
Sbjct: 106 LKSLNS---PLLAVEFFKLVPSLCP----YSQNDPFLYNRIILILSRSNLPDRFDRVRSI 158
Query: 173 FDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVC 232
D M V + +T LI L+ L +++ L+ Y L++
Sbjct: 159 LDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRL----VKKWDLKMNSFTYKCLLQAYL 214
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
+ + S AF + E+ + G KLD YN L++AL K E+A +V E+M++ C +
Sbjct: 215 RSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDAL---AKDEKACQVFEDMKKRHCRRDEY 271
Query: 293 TCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM 350
T +MI R +EA + + + EG+ +V+GYN + L K +A+ +F M
Sbjct: 272 TYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRM 331
Query: 351 PRRGCAPDVVTYRTLFDGLCRWRQFRE---AVVVLDEMMFKG-YAPLSKNLNAF--VSE- 403
GC P+ TY L + L Q V + M +G Y+ L + L+ VSE
Sbjct: 332 VETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEA 391
Query: 404 -------------------------LCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSM 438
LC G +LS + KG + + +++ V S
Sbjct: 392 HRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSA 451
Query: 439 VCKPEKVPESFELLDAL 455
+ K +++ +L + +
Sbjct: 452 LGKLKQISHIHDLFEKM 468
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 170/407 (41%), Gaps = 21/407 (5%)
Query: 30 LNPNPQTNHRPFRHSLLSYDLIITKLGRA---------KMLPEMEQVLHQLHLDTRHRVP 80
LN + ++ ++Y L+I L R+ ++ E+E+ +L LD +
Sbjct: 217 LNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIER--DKLELDVQ---- 270
Query: 81 EPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALL-TCRQFDAVTELA 139
L+ +I +A++ PS+A+Q + + +++ AL + R +A
Sbjct: 271 --LVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFE 328
Query: 140 ARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENS 199
P YN L++ G A + EM RGV PD+ T+ LI
Sbjct: 329 ELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAG 388
Query: 200 RLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALY 259
R A + +EM ++ +++ L+ G GE F++ EM G+K D Y
Sbjct: 389 RWESARIVLKEM-EAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFY 447
Query: 260 NTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE- 318
N +I+ K + A+ + M G E + VT N +I +C+ A + + +E
Sbjct: 448 NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Query: 319 -GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFRE 377
G P YN+ + + +W + L M +G P+VVT+ TL D + +F +
Sbjct: 508 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFND 567
Query: 378 AVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
A+ L+EM G P S NA ++ Q G E +TS G
Sbjct: 568 AIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDG 614
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 125/255 (49%), Gaps = 19/255 (7%)
Query: 148 PDACTYNILI----RASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLRE 203
PD YN++I + +CL D A FD M S G+ PD+ T+ TLI C++ R
Sbjct: 442 PDRQFYNVVIDTFGKFNCL----DHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR--- 494
Query: 204 AFELKEEMFREFKLEGCV---TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYN 260
+ EEMF + GC+ T Y +I R+ +M +G+ + +
Sbjct: 495 -HIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHT 553
Query: 261 TLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA---YRILDGV 317
TL++ K+G+ +A+ LEEM+ G + +S N +I Y + E+A +R++
Sbjct: 554 TLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTS- 612
Query: 318 EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFRE 377
+G+KP ++ N + ++ + +EA + M G PDVVTY TL L R +F++
Sbjct: 613 DGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQK 672
Query: 378 AVVVLDEMMFKGYAP 392
VV +EM+ G P
Sbjct: 673 VPVVYEEMIMSGCKP 687
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 191/430 (44%), Gaps = 21/430 (4%)
Query: 35 QTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCH-VITFYAR 93
Q ++ F + LL Y ++I LGR+ + L++ L ++ + PL + +I AR
Sbjct: 158 QKHNLCFSYELL-YSILIHALGRS-------EKLYEAFLLSQKQTLTPLTYNALIGACAR 209
Query: 94 ARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAV------TELAARAGEFGA 147
+A+ + Q +++ ++ +L + D+V E+ E
Sbjct: 210 NNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLEL-- 267
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
D N +I G +A +L ++ G+ AT ++I L ++ R EA L
Sbjct: 268 -DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEAL 326
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
EE+ R+ ++ Y L+KG K G L A + EM K+G+ D Y+ LI+A
Sbjct: 327 FEEL-RQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYV 385
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVI 325
AG+ E A VL+EM G + NS + ++ + +++ +++L ++ GVKPD
Sbjct: 386 NAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQ 445
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
YNV + K AM F M G PD VT+ TL D C+ + A + + M
Sbjct: 446 FYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAM 505
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKV 445
+G P + N ++ + ++ + +L + S+G + N ++ + K +
Sbjct: 506 ERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRF 565
Query: 446 PESFELLDAL 455
++ E L+ +
Sbjct: 566 NDAIECLEEM 575
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 112/246 (45%), Gaps = 12/246 (4%)
Query: 115 TLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFD 174
T FN L HA+ T FD + E PD T+N LI C G A E+F+
Sbjct: 453 TFGKFNCLDHAMTT---FDRML------SEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFE 503
Query: 175 EMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKI 234
M RG P T+ +I+ + R + L +M + L VT +T L+ K
Sbjct: 504 AMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVT-HTTLVDVYGKS 562
Query: 235 GELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTC 294
G + A +EM GLK + +YN LINA + G E+A+ M G + + +
Sbjct: 563 GRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLAL 622
Query: 295 NVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPR 352
N +I + + EA+ +L ++ GVKPDV+ Y + L + K+ + ++ +M
Sbjct: 623 NSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIM 682
Query: 353 RGCAPD 358
GC PD
Sbjct: 683 SGCKPD 688
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P + YN LI A RG +++A F M S G++P +LI+ E+ R EAF +
Sbjct: 582 PSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAV 641
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
+ M +E ++ V YT L+K + ++ + + +EM+ G K D + L +AL
Sbjct: 642 LQYM-KENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSAL 699
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/403 (27%), Positives = 161/403 (39%), Gaps = 43/403 (10%)
Query: 12 LSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQL 71
L + RS D S+ F + NP + + + Y+ + L K M ++L Q+
Sbjct: 84 LRATSRSSND-SLRFFNWARSNPS-----YTPTSMEYEELAKSLASHKKYESMWKILKQM 137
Query: 72 HLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIP-SFRCQRTLKSFNTLLHALLTCR 130
D + LC +I Y + +AV+ F +P + CQ+T+ +N+LLHAL +
Sbjct: 138 K-DLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVK 196
Query: 131 QFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFG 189
F L R G PD TY IL+ C G A E DEM RG P
Sbjct: 197 MFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRD 256
Query: 190 TLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVK 249
LI L L A E+ +M + + T + LI+ + K GE+ + + K
Sbjct: 257 LLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQT-FNILIEAISKSGEVEFCIEMYYTACK 315
Query: 250 KGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEE 309
GL +D Y TLI A+ K GK +EA R+L NN E
Sbjct: 316 LGLCVDIDTYKTLIPAVSKIGKIDEAFRLL-------------------------NNCVE 350
Query: 310 AYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGL 369
+G KP Y + +C+ G + +A F DM + P+ Y L
Sbjct: 351 --------DGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMC 402
Query: 370 CRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFEL 412
R +F +A L EM G P+S+ + L G +L
Sbjct: 403 GRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDL 445
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/374 (21%), Positives = 162/374 (43%), Gaps = 18/374 (4%)
Query: 86 HVITFYARARQPSRAVQTF-LSIPS---FRCQR-TLKSFNTLLHALLTCRQFDAVTELAA 140
HV+ R P R++ + L + S FR R T +S N L R F+ A
Sbjct: 53 HVVNIVRREIHPERSLNSLRLPVTSEFVFRVLRATSRSSNDSL------RFFNW-----A 101
Query: 141 RAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSR 200
R+ P + Y L ++ + +++ +M+ + T +I + +N
Sbjct: 102 RSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGH 161
Query: 201 LREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYN 260
+ +A EL + + + V +Y +L+ +C + A+ + M++KGLK D Y
Sbjct: 162 VDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYA 221
Query: 261 TLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE-- 318
L+N AGK +EA L+EM G + +++I E A ++ +
Sbjct: 222 ILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKG 281
Query: 319 GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREA 378
G PD+ +N+ + + K G+ +++++ + G D+ TY+TL + + + EA
Sbjct: 282 GFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEA 341
Query: 379 VVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSM 438
+L+ + G+ P + +C+ G F+ + SD+ K N ++ ++++M
Sbjct: 342 FRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITM 401
Query: 439 VCKPEKVPESFELL 452
+ K ++ L
Sbjct: 402 CGRGGKFVDAANYL 415
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 119/276 (43%), Gaps = 6/276 (2%)
Query: 164 GHADRAFELFDEM-RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVT 222
GH D+A ELF+ + ++ G + + +L+H LC+ A+ L M R+ L+
Sbjct: 160 GHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK-GLKPDKR 218
Query: 223 IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEM 282
Y L+ G C G++ A DEM ++G A + LI L AG E A ++ +M
Sbjct: 219 TYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKM 278
Query: 283 REGGCEWNSVTCNVMIGEYCRENNFE---EAYRILDGVEGVKPDVIGYNVFLGWLCKEGK 339
+GG + T N++I + E E Y + G+ D+ Y + + K GK
Sbjct: 279 TKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKL-GLCVDIDTYKTLIPAVSKIGK 337
Query: 340 WSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNA 399
EA L ++ G P Y + G+CR F +A +M K + P
Sbjct: 338 IDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTM 397
Query: 400 FVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVV 435
++ + G F + L ++T G + +D+V
Sbjct: 398 LITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMV 433
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 93/236 (39%), Gaps = 3/236 (1%)
Query: 224 YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEM- 282
Y L K + + ++I +M L + +I K G ++A+ + +
Sbjct: 114 YEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVP 173
Query: 283 REGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKW 340
+ GC+ N ++ C F AY ++ + +G+KPD Y + + C GK
Sbjct: 174 KTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKM 233
Query: 341 SEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAF 400
EA + +M RRG P L +GL A ++ +M G+ P + N
Sbjct: 234 KEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNIL 293
Query: 401 VSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ + + G E + G + + ++ V K K+ E+F LL+ V
Sbjct: 294 IEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCV 349
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 8/167 (4%)
Query: 116 LKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFD 174
+++FN L+ A+ + + E+ A + G D TY LI A G D AF L +
Sbjct: 287 IQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLN 346
Query: 175 EMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVT---IYTNLIKGV 231
G +P + + +I +C N +AF F + K++ +YT LI
Sbjct: 347 NCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSF----FSDMKVKAHPPNRPVYTMLITMC 402
Query: 232 CKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
+ G+ A EM + GL + ++ + + L GK + A+R+
Sbjct: 403 GRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRI 449
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 175/390 (44%), Gaps = 13/390 (3%)
Query: 74 DTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFD 133
D H+ P P +I + RQ A + S + ++++F L+ +
Sbjct: 145 DYDHKSPHPY-NEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLAS 203
Query: 134 AVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLI 192
R ++G PD ++I+I + A A FD ++ R PD + L+
Sbjct: 204 EAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVYTNLV 262
Query: 193 HRLCENSRLREAFELKEEMFREFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVK 249
C + EA E++F+E KL G V Y+ +I +C+ G++S A + +M+
Sbjct: 263 RGWCRAGEISEA----EKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLD 318
Query: 250 KGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEE 309
G +A +N L+ KAG+ E+ L+V +M++ GCE +++T N +I +CR+ N E
Sbjct: 319 SGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLEN 378
Query: 310 AYRILDGVEGVKPDVIG--YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFD 367
A ++L+ + K +V +N ++ K+ + A ++ M C P+ VTY L
Sbjct: 379 AVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMR 438
Query: 368 GLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKIC 427
+ + + EM K P V+ C G++ + ++ + +
Sbjct: 439 MFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLT 498
Query: 428 NE-GIWDVVLSMVCKPEKVPESFELLDALV 456
++++VL+ + + ++ + EL++ ++
Sbjct: 499 PSLSLYEMVLAQLRRAGQLKKHEELVEKMI 528
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 76/167 (45%), Gaps = 1/167 (0%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
+I + R AV+ ++ +C+ +FNT+ + R + + ++ E
Sbjct: 366 LIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAK 425
Query: 147 A-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
P+ TYNIL+R D ++ EM + V P+ T+ L+ C A+
Sbjct: 426 CEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAY 485
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGL 252
+L +EM E L +++Y ++ + + G+L + ++M++KGL
Sbjct: 486 KLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 120/288 (41%), Gaps = 49/288 (17%)
Query: 41 FRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEP---LLCHVITFYARARQP 97
F ++ Y ++ RA + E E+V ++ L EP VI R Q
Sbjct: 251 FEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAG----IEPNVYTYSIVIDALCRCGQI 306
Query: 98 SRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNIL 156
SRA F + C +FN L+ + + + V ++ + + G PD TYN L
Sbjct: 307 SRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFL 366
Query: 157 IRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLI------------HRLCENSRLREA 204
I A C + + A ++ + M + + +TF T+ HR+ S++ EA
Sbjct: 367 IEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMY--SKMMEA 424
Query: 205 -------------------------FELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSW 239
++K+EM + ++E V Y L+ C +G +
Sbjct: 425 KCEPNTVTYNILMRMFVGSKSTDMVLKMKKEM-DDKEVEPNVNTYRLLVTMFCGMGHWNN 483
Query: 240 AFRIKDEMVK-KGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGG 286
A+++ EMV+ K L +LY ++ L +AG+ ++ ++E+M + G
Sbjct: 484 AYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKG 531
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 159/376 (42%), Gaps = 11/376 (2%)
Query: 37 NHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQ 96
N + F+H+ +Y+ +I LG+ K + ++ + + + + + YARAR+
Sbjct: 120 NQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMK--AKKLLSKETFALISRRYARARK 177
Query: 97 PSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQF-DAVTELAARAGEFGAPDACTYNI 155
A+ F + F + FN +L L R DA + PD +Y I
Sbjct: 178 VKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTI 237
Query: 156 LIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREF 215
L+ + R E+ EM+ G PD +G +I+ C+ + EA F E
Sbjct: 238 LLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRF----FNEM 293
Query: 216 KLEGCVT---IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKK 272
+ C I+ +LI G+ +L+ A + G L+A YN L+ A + +
Sbjct: 294 EQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRM 353
Query: 273 EEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLG 332
E+A + ++EMR G N+ T ++++ R +EAY + + +P V Y + +
Sbjct: 354 EDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM-SCEPTVSTYEIMVR 412
Query: 333 WLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
C + + A+ ++ +M +G P + + +L LC + EA +EM+ G P
Sbjct: 413 MFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRP 472
Query: 393 LSKNLNAFVSELCQEG 408
+ L EG
Sbjct: 473 PGHMFSRLKQTLLDEG 488
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 51/226 (22%), Positives = 110/226 (48%), Gaps = 7/226 (3%)
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
K+ E AF +E G K++++ +N +++ L K+ +A +V ++M++ E +
Sbjct: 177 KVKEAIGAFHKMEEF---GFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIK 233
Query: 293 TCNVMIGEYCRENNF---EEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHD 349
+ +++ + +E N +E R + EG +PDV+ Y + + CK K+ EA+ F++
Sbjct: 234 SYTILLEGWGQELNLLRVDEVNREMKD-EGFEPDVVAYGIIINAHCKAKKYEEAIRFFNE 292
Query: 350 MPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGN 409
M +R C P + +L +GL ++ +A+ + G+ + NA V C
Sbjct: 293 MEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQR 352
Query: 410 FELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
E + ++ KG N +D++L + + ++ E++E+ +
Sbjct: 353 MEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM 398
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 6/184 (3%)
Query: 29 FLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVI 88
F N Q N +P H S +I LG K L + + + + + P ++
Sbjct: 289 FFNEMEQRNCKPSPHIFCS---LINGLGSEKKLNDALEFFERSK-SSGFPLEAPTYNALV 344
Query: 89 TFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAP 148
Y +++ A +T + ++++ +LH L+ ++ E+ P
Sbjct: 345 GAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS--CEP 402
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
TY I++R C + D A +++DEM+ +GV P F +LI LC ++L EA E
Sbjct: 403 TVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYF 462
Query: 209 EEMF 212
EM
Sbjct: 463 NEML 466
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 144/333 (43%), Gaps = 41/333 (12%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P+ T+NIL C + + ++M G PD T+ TL+ C RL+EAF L
Sbjct: 234 PNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYL 293
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+ M+R + VT YT+LIKG+CK G + A + MV +G+K D YNTLI A
Sbjct: 294 YKIMYRRRVVPDLVT-YTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYC 352
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGY 327
K G +++ ++L EM + TC V++ + RE A + + +K D I +
Sbjct: 353 KEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVD-IPF 411
Query: 328 NV---FLGWLCKEGK------------------------------------WSEAMDLFH 348
V + LC+EGK EA+ L
Sbjct: 412 EVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKG 471
Query: 349 DMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEG 408
+ + D TYR L LCR + REA ++ EM P S A V C+E
Sbjct: 472 KLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKEL 531
Query: 409 NFELLSTVLSDLTSKGKICNEGIWDVVLSMVCK 441
+F+ +LS + +I + ++ ++ VC+
Sbjct: 532 DFDKAERLLSLFAMEFRIFDPESYNSLVKAVCE 564
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 158/362 (43%), Gaps = 39/362 (10%)
Query: 79 VPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTEL 138
+P+P+L + +++ PS+ V S TL H+ + + E+
Sbjct: 25 IPKPILNPLYNLLPQSQNPSKIVDVICS--------------TLNHSDYSVLLPNLRDEV 70
Query: 139 AARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMR-SRGVRPDQATFGTLIHRLCE 197
+ G P+ +L+R + A RA F ++ G RP+ + L+H L
Sbjct: 71 KSLIPHLGYPEIS--RVLLR---FQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVS 125
Query: 198 NSRLREAFEL---------KEEMFREFKLEGCVT--------IYTNLIKGVCKIGELSWA 240
+ + A + K+E F++ T ++ L+KG K+G +
Sbjct: 126 SKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEG 185
Query: 241 FRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGE 300
FR+ E++ G + N L+N L K E+ +V M G N+ T N++
Sbjct: 186 FRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNV 245
Query: 301 YCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPD 358
+C ++NF E L+ +E G +PD++ YN + C+ G+ EA L+ M RR PD
Sbjct: 246 FCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPD 305
Query: 359 VVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLS 418
+VTY +L GLC+ + REA M+ +G P + N + C+EG + +L
Sbjct: 306 LVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLH 365
Query: 419 DL 420
++
Sbjct: 366 EM 367
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/335 (23%), Positives = 140/335 (41%), Gaps = 9/335 (2%)
Query: 41 FRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCH--VITFYARARQPS 98
F L++Y+ +++ R L E + + R RV L+ + +I + +
Sbjct: 267 FEPDLVTYNTLVSSYCRRGRLKE---AFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVR 323
Query: 99 RAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARA-GEFGAPDACTYNILI 157
A QTF + + S+NTL++A +L G PD T +++
Sbjct: 324 EAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIV 383
Query: 158 RASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKL 217
G A E+R V LI LC+ + A L + + E
Sbjct: 384 EGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGH 443
Query: 218 EGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALR 277
E Y NLI+ + + + A +K ++ + LDA Y LI L + G+ EA
Sbjct: 444 EAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAES 503
Query: 278 VLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILD--GVEGVKPDVIGYNVFLGWLC 335
++ EM + + +S C ++ YC+E +F++A R+L +E D YN + +C
Sbjct: 504 LMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVC 563
Query: 336 KEG-KWSEAMDLFHDMPRRGCAPDVVTYRTLFDGL 369
+ G + +A++L M R G P+ +T + L L
Sbjct: 564 ETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVL 598
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 157/378 (41%), Gaps = 59/378 (15%)
Query: 118 SFNTLLHAL-LTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEM 176
++ TL+ L + DA+ + G +PD TYN+L+ GH + E+++ M
Sbjct: 425 NYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERM 484
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
++ G +P+ T +I LC +++EA E+ F + + C + +KG C+ G
Sbjct: 485 KAEGPKPNAVTNSVIIEGLCFARKVKEA----EDFFSSLE-QKCPENKASFVKGYCEAGL 539
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
A++ V+ L ++Y L +L G E+A VL++M E C
Sbjct: 540 SKKAYK---AFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGK 596
Query: 297 MIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
MIG +C+ NN EA + D + G+ PD+ Y + + C+ + +A LF DM +RG
Sbjct: 597 MIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRG 656
Query: 355 CAPDVVTYRTLFD------------------------------------GL--------- 369
PDVVTY L D GL
Sbjct: 657 IKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLI 716
Query: 370 ---CRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKI 426
C+ +A + D M+ G P +S ++G ++ T++++L+ K I
Sbjct: 717 DRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYIDMAVTLVTELSKKYNI 776
Query: 427 CNEGIWDVVLSMVCKPEK 444
+E V S K ++
Sbjct: 777 PSESFEAAVKSAALKAKR 794
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 157/351 (44%), Gaps = 15/351 (4%)
Query: 112 CQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAF 170
C +K+ N L++ + + + L + + G + TY I+++A C +G+ + A
Sbjct: 177 CVVDIKACNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAA 236
Query: 171 ELFDEMRSRGVRPDQATFG--TLIHRLCENSRLREAFELKEEMFREFKLEG--CVTIYTN 226
L E +++ FG T I+ LC +A L E+ L G +
Sbjct: 237 MLLIE--------NESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGM 288
Query: 227 LIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGG 286
+++G C ++ A + EM + G LD +I+ K EAL L++M G
Sbjct: 289 VVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKG 348
Query: 287 CEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKP--DVIGYNVFLGWLCKEGKWSEAM 344
+ N V ++++ YC+ + EA + D + YNV L K G+ EA
Sbjct: 349 LKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAF 408
Query: 345 DLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSEL 404
+L +M RG PDV+ Y TL DG C + +A+ ++DEM+ G +P N VS L
Sbjct: 409 ELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGL 468
Query: 405 CQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
+ G+ E + + + ++G N V++ +C KV E+ + +L
Sbjct: 469 ARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSL 519
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 124/301 (41%), Gaps = 31/301 (10%)
Query: 154 NILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFR 213
+++++ C A E F E R + D+ + L + R+ EAFEL +EM +
Sbjct: 357 SLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEM-K 415
Query: 214 EFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKE 273
+ + V YT LI G C G++ A + DEM+ G+ D YN L++ L + G +E
Sbjct: 416 DRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEE 475
Query: 274 EALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPD-----VIGY- 327
E L + E M+ G + N+VT +V+I C +EA +E P+ V GY
Sbjct: 476 EVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYC 535
Query: 328 ---------------------NVFLGW---LCKEGKWSEAMDLFHDMPRRGCAPDVVTYR 363
+V++ LC EG +A D+ M P
Sbjct: 536 EAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCG 595
Query: 364 TLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSK 423
+ C+ REA V+ D M+ +G P + C+ + ++ D+ +
Sbjct: 596 KMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQR 655
Query: 424 G 424
G
Sbjct: 656 G 656
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 121/315 (38%), Gaps = 34/315 (10%)
Query: 163 RGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCE-------NSRLREAF---------- 205
R + A +++ GV P+ + TL+ L +S L E
Sbjct: 67 RDDPNLALSFLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELIKNEERGFTVM 126
Query: 206 -------ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAAL 258
E EE R F L + + L+K +G A + + + +D
Sbjct: 127 DLIEVIGEQAEEKKRSFVL---IRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKA 183
Query: 259 YNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE 318
N L+N + + GK + + +++++ G N T +++ CR+ N EEA +L E
Sbjct: 184 CNFLMNRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENE 243
Query: 319 GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM-PRRGCAPDVV--TYRTLFDGLCRWRQF 375
V GY F+ LC G+ +A+ L ++ R+ A D + + G C +
Sbjct: 244 S----VFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKM 299
Query: 376 REAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVV 435
+ A V+ EM G+ A + C+ N L + KG N I ++
Sbjct: 300 KAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLI 359
Query: 436 LSMVCKPEKVPESFE 450
L CK + E+ E
Sbjct: 360 LQCYCKMDMCLEALE 374
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 168/407 (41%), Gaps = 84/407 (20%)
Query: 7 ISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQ 66
IS + S LR + DP A +++ N + + P S + +L + +L + + ++E
Sbjct: 31 ISVSKAKSTLRKEHDPDKALKIYANVSDHS-ASPV-SSRYAQELTVRRLAKCRRFSDIET 88
Query: 67 VLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHAL 126
++ D + + EP +I Y +A + A++TF + + R+ SFN LL+A
Sbjct: 89 LIESHKNDPKIK-EEPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNAC 147
Query: 127 LTCRQFDAV----TELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVR 182
L + FD V E+ R + PD +Y ILI++ C G ++A E+ +M+ +G+
Sbjct: 148 LHSKNFDKVPQLFDEIPQRYNKI-IPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGME 206
Query: 183 PDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFR 242
F T++ L K GEL A
Sbjct: 207 VTTIAFTTILSSL------------------------------------YKKGELEVADN 230
Query: 243 IKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV---LEEMREGGCEWNSVTCNVMIG 299
+ +EMVKKG +LD A YN I + +KE RV +EEM G + ++++ N ++
Sbjct: 231 LWNEMVKKGCELDNAAYNVRI----MSAQKESPERVKELIEEMSSMGLKPDTISYNYLMT 286
Query: 300 EYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDV 359
YC +EA ++ +G+EG CAP+
Sbjct: 287 AYCERGMLDEAKKVYEGLEG---------------------------------NNCAPNA 313
Query: 360 VTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQ 406
T+RTL LC R + + + + ++ P L V L +
Sbjct: 314 ATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVE 360
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 131/311 (42%), Gaps = 12/311 (3%)
Query: 139 AARAGEFGAPDACTYNILIRASCLRGH--ADRAFELFDEMRSRGVRPDQATFGT--LIHR 194
AA G AP + ++ S LR D+A +++ + P + + + R
Sbjct: 17 AAADGTTTAPSSGKISVSKAKSTLRKEHDPDKALKIYANVSDHSASPVSSRYAQELTVRR 76
Query: 195 LCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKL 254
L + R + L E + K++ Y+ LI+ + + A R ++M + G
Sbjct: 77 LAKCRRFSDIETLIESHKNDPKIKE-EPFYSTLIRSYGQASMFNHAMRTFEQMDQYGTPR 135
Query: 255 DAALYNTLINALFKAGKKEEALRVLEEM--REGGCEWNSVTCNVMIGEYCRENNFEEAYR 312
A +N L+NA + ++ ++ +E+ R + ++ ++I YC E+A
Sbjct: 136 SAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIE 195
Query: 313 ILDGVEGVKPDV--IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLC 370
I+ ++G +V I + L L K+G+ A +L+++M ++GC D Y +
Sbjct: 196 IMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAYNVRI--MS 253
Query: 371 RWRQFREAVV-VLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNE 429
++ E V +++EM G P + + N ++ C+ G + V L N
Sbjct: 254 AQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNA 313
Query: 430 GIWDVVLSMVC 440
+ ++ +C
Sbjct: 314 ATFRTLIFHLC 324
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 151/336 (44%), Gaps = 41/336 (12%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
P YN+++R D A LFDEMR R + PD+ T+ TLI + A
Sbjct: 152 TPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALS 211
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA- 265
++M ++ ++ G + +Y+NLI+ ++ + S A I + + G+ D YN++IN
Sbjct: 212 WLQKMEQD-RVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVY 270
Query: 266 ----LFKAGK---KE---------------------------EALRVLEEMREGGCEWNS 291
LF+ + KE EAL V EM+E C +
Sbjct: 271 GKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDL 330
Query: 292 VTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHD 349
TCN+MI Y + + +EA R+ + ++P+V+ YN L + + EA+ LF
Sbjct: 331 TTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRL 390
Query: 350 MPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGN 409
M R+ +VVTY T+ + + +A ++ EM +G P + + +S + G
Sbjct: 391 MQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGK 450
Query: 410 FELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKV 445
+ +T+ L S G ++ ++ +M+ E+V
Sbjct: 451 LDRAATLFQKLRSSGVEIDQVLYQ---TMIVAYERV 483
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 148/339 (43%), Gaps = 8/339 (2%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEM 176
S++TLL + +F + A E A D T NI+I A LF +
Sbjct: 297 SYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSL 356
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
R + P+ ++ T++ E EA L M R+ +E V Y +IK K E
Sbjct: 357 RKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK-DIEQNVVTYNTMIKIYGKTME 415
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
A + EM +G++ +A Y+T+I+ KAGK + A + +++R G E + V
Sbjct: 416 HEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQT 475
Query: 297 MIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCA 356
MI Y R A R+L ++ PD I + L K G+ EA +F G
Sbjct: 476 MIVAYERVGLMGHAKRLLHELK--LPDNIPRETAITILAKAGRTEEATWVFRQAFESGEV 533
Query: 357 PDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTV 416
D+ + + + R +++ + V ++M GY P S + ++ ++ FE TV
Sbjct: 534 KDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTV 593
Query: 417 LSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
++ +G + + + +LS+ + FE++++L
Sbjct: 594 YREMQEEGCVFPDEVHFQMLSLYSS----KKDFEMVESL 628
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 2/203 (0%)
Query: 185 QATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIK 244
Q + ++ L + + + L + + E K V Y +++ V + + A +
Sbjct: 119 QLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLF 178
Query: 245 DEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRE 304
DEM ++ L D Y+TLI + K G + AL L++M + + V + +I R
Sbjct: 179 DEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRL 238
Query: 305 NNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTY 362
++ +A I ++ G+ PD++ YN + K + EA L +M G P+ V+Y
Sbjct: 239 CDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSY 298
Query: 363 RTLFDGLCRWRQFREAVVVLDEM 385
TL +F EA+ V EM
Sbjct: 299 STLLSVYVENHKFLEALSVFAEM 321
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 162/344 (47%), Gaps = 11/344 (3%)
Query: 88 ITFYARARQPSRAVQTFLSIPSFRCQR-TLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
+++ +AR A + FL C R T+ S++ L+ C ++ A+ L + G
Sbjct: 120 LSYDNKARCAKLAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDG 179
Query: 147 APD-ACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
P A T+N+LI + G A +A F + ++ RP + ++ +++ L + +
Sbjct: 180 FPTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLG----VKQY 235
Query: 206 ELKEEMFREFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTL 262
+L E ++++ +G V Y L+ ++G++ R+ DEM + G D+ YN L
Sbjct: 236 KLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNIL 295
Query: 263 INALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGV 320
++ L K K AL L M+E G + + + +I R N E LD + G
Sbjct: 296 LHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGC 355
Query: 321 KPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVV 380
+PDV+ Y V + G+ +A ++F +M +G P+V TY ++ GLC +FREA
Sbjct: 356 RPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACW 415
Query: 381 VLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
+L EM +G P + VS L + G V+ ++ KG
Sbjct: 416 LLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKG 459
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 14/255 (5%)
Query: 37 NHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYA-RAR 95
N+RPF+H SY+ I+ L K +E V Q+ D P+ L +++ + R
Sbjct: 214 NYRPFKH---SYNAILNSLLGVKQYKLIEWVYKQMLEDGFS--PDVLTYNILLWTNYRLG 268
Query: 96 QPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYN 154
+ R + F + ++N LLH L + A E G P Y
Sbjct: 269 KMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYT 328
Query: 155 ILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFRE 214
LI G+ + DEM G RPD + +I + L +A +EMFRE
Sbjct: 329 TLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKA----KEMFRE 384
Query: 215 FKLEG---CVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGK 271
++G V Y ++I+G+C GE A + EM +G + +Y+TL++ L KAGK
Sbjct: 385 MTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGK 444
Query: 272 KEEALRVLEEMREGG 286
EA +V+ EM + G
Sbjct: 445 LSEARKVIREMVKKG 459
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 149/339 (43%), Gaps = 13/339 (3%)
Query: 81 EPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAA 140
E + +I+ R + ++ F +PS R++ S+ L++A +++ EL
Sbjct: 141 EHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLD 200
Query: 141 R-AGEFGAPDACTYNILIRASCLRGHAD--RAFELFDEMRSRGVRPDQATFGTLIHRLCE 197
R E +P TYN +I A C RG D LF EMR G++PD T+ TL+
Sbjct: 201 RMKNEKISPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACA- 258
Query: 198 NSRLREAFELKEEMFREFKLEGCV---TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKL 254
+R + E +FR G V T Y++L++ K+ L + EM G
Sbjct: 259 ---IRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLP 315
Query: 255 DAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRIL 314
D YN L+ A K+G +EA+ V +M+ GC N+ T +V++ + + +++ ++
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 315 DGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRW 372
++ PD YN+ + + G + E + LFHDM PD+ TY + +
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKG 435
Query: 373 RQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
+A +L M P SK + Q +E
Sbjct: 436 GLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYE 474
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 123/277 (44%), Gaps = 6/277 (2%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P+ Y I+I G D+ E+FDEM S+GV ++ LI+ N R + EL
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWA--FRIKDEMVKKGLKLDAALYNTLINA 265
+ M E K+ + Y +I C G L W + EM +G++ D YNTL++A
Sbjct: 199 LDRMKNE-KISPSILTYNTVIN-ACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA 256
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPD 323
G +EA V M +GG + T + ++ + + E+ +L + G PD
Sbjct: 257 CAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD 316
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
+ YNV L K G EAM +FH M GC P+ TY L + + ++ + +
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFL 376
Query: 384 EMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDL 420
EM P + N + + G F+ + T+ D+
Sbjct: 377 EMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDM 413
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/406 (20%), Positives = 166/406 (40%), Gaps = 47/406 (11%)
Query: 48 YDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCH--VITFYARARQPSRAVQTFL 105
Y ++I+ LGR +L + +V ++ V + + +I Y R + +++
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEM---PSQGVSRSVFSYTALINAYGRNGRYETSLELLD 200
Query: 106 SIPSFRCQRTLKSFNTLLHALLTCR-QFDAVTELAARAGEFG-APDACTYNILIRASCLR 163
+ + + ++ ++NT+++A ++ + L A G PD TYN L+ A +R
Sbjct: 201 RMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIR 260
Query: 164 GHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTI 223
G D A +F M G+ PD T+ L+ + RL + +L EM L +T
Sbjct: 261 GLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD-ITS 319
Query: 224 YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMR 283
Y L++ K G + A + +M G +A Y+ L+N ++G+ ++ ++ EM+
Sbjct: 320 YNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMK 379
Query: 284 EGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGK-- 339
+ ++ T N++I + F+E + + E ++PD+ Y + + C +G
Sbjct: 380 SSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGII-FACGKGGLH 438
Query: 340 ----------------------------------WSEAMDLFHDMPRRGCAPDVVTYRTL 365
+ EA+ F+ M G P + T+ +L
Sbjct: 439 EDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSL 498
Query: 366 FDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
R +E+ +L ++ G NA + Q G FE
Sbjct: 499 LYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFE 544
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 3/219 (1%)
Query: 223 IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEM 282
IYT +I + + G L + DEM +G+ Y LINA + G+ E +L +L+ M
Sbjct: 143 IYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRM 202
Query: 283 REGGCEWNSVTCNVMIGEYCREN-NFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGK 339
+ + +T N +I R ++E + + EG++PD++ YN L G
Sbjct: 203 KNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGL 262
Query: 340 WSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNA 399
EA +F M G PD+ TY L + + R+ + +L EM G P + N
Sbjct: 263 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 322
Query: 400 FVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSM 438
+ + G+ + V + + G N + V+L++
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNL 361
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/314 (26%), Positives = 145/314 (46%), Gaps = 9/314 (2%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P +YN +I C G RA++L +E P + T+ L+ LC+ +A +
Sbjct: 340 PRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNV 399
Query: 208 KEEMFREFKLEGC--VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
E M R+ EG IY ++G+C + + + M++ + D NT+IN
Sbjct: 400 LELMLRK---EGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVING 456
Query: 266 LFKAGKKEEALRVLEEMREGG-CEWNSVTCNVMIGEYCRENNFEEAYRILDGV---EGVK 321
L K G+ ++A++VL++M G C ++VT N ++ + EEA +L+ V +K
Sbjct: 457 LCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIK 516
Query: 322 PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVV 381
P V+ YN + L K K EAM +F + + D TY + DGLC + A
Sbjct: 517 PGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKF 576
Query: 382 LDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCK 441
D++++ + AF+ LCQ G L DL G I N ++ V++ +
Sbjct: 577 WDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSR 636
Query: 442 PEKVPESFELLDAL 455
E++++L+ +
Sbjct: 637 SGLKREAYQILEEM 650
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 130/284 (45%), Gaps = 14/284 (4%)
Query: 118 SFNTLLHALLTCRQFDA-----VTELAARAGEFGAPDACTYNILIRASCLRGHADRAFEL 172
++ L+ +L C++ D V EL R + GA YNI +R C+ + +
Sbjct: 379 TYKLLMESL--CKELDTGKARNVLELMLR--KEGADRTRIYNIYLRGLCVMDNPTEILNV 434
Query: 173 FDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFR-EFKLEGCVTIYTNLIKGV 231
M RPD+ T T+I+ LC+ R+ +A ++ ++M +F VT+ T ++ G+
Sbjct: 435 LVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNT-VMCGL 493
Query: 232 CKIGELSWAFRIKDE-MVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWN 290
G A + + M + +K YN +I LFK K +EA+ V ++ + +
Sbjct: 494 LAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTAD 553
Query: 291 SVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFH 348
S T ++I C N + A + D V + D Y FL LC+ G S+A +
Sbjct: 554 STTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLY 613
Query: 349 DMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
D+ G P+VV Y T+ R REA +L+EM G AP
Sbjct: 614 DLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAP 657
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/419 (23%), Positives = 178/419 (42%), Gaps = 63/419 (15%)
Query: 64 MEQVLHQL----HLDTRHR----------VPEPLLCHVITFYAR---ARQPSRAVQTFLS 106
+ V+H L D HR +P+ C+VI AR +R P +
Sbjct: 93 LSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVII--ARLLYSRSPVSTLGVIHR 150
Query: 107 IPSFRCQ--RTLKSFNTLLHALLTC-RQFDAVTELAARAGEFGAPDACTYNILIRASCLR 163
+ F+ + +L ++N L++ L T R DA + PD T+ LI C
Sbjct: 151 LIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEI 210
Query: 164 GHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTI 223
+ A ++FDEMR G+RP+ T LI + + +L +E++ K E ++
Sbjct: 211 RELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSM 270
Query: 224 ----YTNLIKGVCKIGELSWAFRIKDEM-VKKGLKLDAALYNTLINALFKAGKKEEALRV 278
+ NL+ +C+ G + F I + M + + + ++ A Y +I++L + + A R+
Sbjct: 271 KAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFA-YGHMIDSLCRYRRNHGAARI 329
Query: 279 LEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEG 338
+ M+ +G+KP YN + LCK+G
Sbjct: 330 VYIMKS---------------------------------KGLKPRRTSYNAIIHGLCKDG 356
Query: 339 KWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLN 398
A L + P TY+ L + LC+ +A VL+ M+ K A ++ N
Sbjct: 357 GCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYN 416
Query: 399 AFVSELCQEGN-FELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
++ LC N E+L+ ++S L + +E + V++ +CK +V ++ ++LD ++
Sbjct: 417 IYLRGLCVMDNPTEILNVLVSMLQGDCRP-DEYTLNTVINGLCKMGRVDDAMKVLDDMM 474
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 120/270 (44%), Gaps = 10/270 (3%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD+ + +I + C G D A F + G PD+ T +I RL + +
Sbjct: 88 PDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGV 147
Query: 208 KEEMFREFKLE--GCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
+ FK E +T Y L+ +C I + A ++ +M +G D + TLI
Sbjct: 148 IHRLI-GFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGG 206
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV-EGVKPDV 324
+ + E A +V +EMR G NS+T +V+IG + + + E +++ + E +K +
Sbjct: 207 YCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNET 266
Query: 325 ------IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREA 378
+ + +C+EG +++ ++ +M Y + D LCR+R+ A
Sbjct: 267 DTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGA 326
Query: 379 VVVLDEMMFKGYAPLSKNLNAFVSELCQEG 408
++ M KG P + NA + LC++G
Sbjct: 327 ARIVYIMKSKGLKPRRTSYNAIIHGLCKDG 356
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 85/185 (45%), Gaps = 4/185 (2%)
Query: 240 AFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIG 299
A RI D + +G + D+ +++I++L AG+ +EA R G + TCNV+I
Sbjct: 74 ALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIA 133
Query: 300 E--YCRE--NNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGC 355
Y R + +R++ + P + YN + LC + +A L DM RG
Sbjct: 134 RLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGH 193
Query: 356 APDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLST 415
PDVVT+ TL G C R+ A V DEM G P S L+ + + + E
Sbjct: 194 LPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRK 253
Query: 416 VLSDL 420
++ +L
Sbjct: 254 LMKEL 258
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 1/150 (0%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P YN +IR D A +F ++ V D T+ +I LC +++ A +
Sbjct: 517 PGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKF 576
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+++ +Y +KG+C+ G LS A ++ G + YNT+I
Sbjct: 577 WDDVIWPSGRHDAF-VYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECS 635
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVM 297
++G K EA ++LEEMR+ G ++VT ++
Sbjct: 636 RSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/400 (22%), Positives = 172/400 (43%), Gaps = 47/400 (11%)
Query: 35 QTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARA 94
+T HRP SL+SY ++ + K + ++ ++ + ++ VI ++ +
Sbjct: 73 ETGHRP---SLISYTTLLAAMTVQKQYGSISSIVSEVE-QSGTKLDSIFFNAVINAFSES 128
Query: 95 RQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG----APDA 150
AVQ L + T ++NTL+ + + +EL E G P+
Sbjct: 129 GNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNI 188
Query: 151 CTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATF---------------------- 188
T+N+L++A C + + A+E+ +M GVRPD T+
Sbjct: 189 RTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVE 248
Query: 189 ---------------GTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCK 233
G ++ C R+R+ M +E ++E + ++ +LI G +
Sbjct: 249 KMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRM-KEMRVEANLVVFNSLINGFVE 307
Query: 234 IGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
+ + + M + +K D Y+T++NA AG E+A +V +EM + G + ++
Sbjct: 308 VMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHA 367
Query: 294 CNVMIGEYCRENNFEEAYRILDG-VEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPR 352
+++ Y R ++A +L+ + +P+V+ + + C G +AM +F+ M +
Sbjct: 368 YSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCK 427
Query: 353 RGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
G +P++ T+ TL G +Q +A VL M G P
Sbjct: 428 FGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKP 467
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 104/230 (45%), Gaps = 18/230 (7%)
Query: 191 LIHRLCENSRLREAFELKEEMFREFKLEG---CVTIYTNLIKGVCKIGELSWAFRIKDEM 247
L++ L E R EA + +F+ G + YT L+ + + I E+
Sbjct: 51 LMNVLIERGRPHEA----QTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEV 106
Query: 248 VKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNF 307
+ G KLD+ +N +INA ++G E+A++ L +M+E G + T N +I Y
Sbjct: 107 EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKP 166
Query: 308 EEAYRILD-----GVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTY 362
E + +LD G V P++ +NV + CK+ K EA ++ M G PD VTY
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226
Query: 363 RTLFDGLC---RWRQFREAVVVLDEMMFKGYA-PLSKNLNAFVSELCQEG 408
T+ C + R V+++M+ K A P + V C+EG
Sbjct: 227 NTI--ATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREG 274
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 145/304 (47%), Gaps = 26/304 (8%)
Query: 118 SFNTLLHALLTCRQFDAV----TELAARAGEFGA---PDACTYNILIRASCLRGHADRAF 170
S+N +H DA E+ R+ +G+ PD CTYN LI CL G A A
Sbjct: 250 SYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDAL 309
Query: 171 ELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCV---TIYTNL 227
++DE++ G PD +T+ LI C++ R+ +A + EM + G V +Y L
Sbjct: 310 IVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEM----QYNGFVPDTIVYNCL 365
Query: 228 IKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGC 287
+ G K +++ A ++ ++MV++G++ YN LI+ LF+ G+ E + ++++ G
Sbjct: 366 LDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQ 425
Query: 288 EWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMD 345
+++T +++ + CRE E A ++++ +E G D++ + L K+G+W
Sbjct: 426 FVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEK 485
Query: 346 LFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELC 405
L + P+V+ RW EA + + K Y P+ + +F+ +
Sbjct: 486 LMKHIREGNLVPNVL----------RWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMS 535
Query: 406 QEGN 409
G+
Sbjct: 536 MVGS 539
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 107/249 (42%), Gaps = 40/249 (16%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRG------VRPDQATFGTLIHRLCENSRLR 202
D +YNI I G D A LF EM+ R PD T+ +LIH LC + +
Sbjct: 247 DTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAK 306
Query: 203 EAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTL 262
+A + +E+ + E + Y LI+G CK + A RI EM G D +YN L
Sbjct: 307 DALIVWDEL-KVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCL 365
Query: 263 INALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKP 322
++ KA K EA ++ E+M + EGV+
Sbjct: 366 LDGTLKARKVTEACQLFEKMVQ---------------------------------EGVRA 392
Query: 323 DVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVL 382
YN+ + L + G+ LF D+ ++G D +T+ + LCR + AV ++
Sbjct: 393 SCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLV 452
Query: 383 DEMMFKGYA 391
+EM +G++
Sbjct: 453 EEMETRGFS 461
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 162/403 (40%), Gaps = 28/403 (6%)
Query: 79 VPEPLLCHVITFYARARQPSRAVQTFLSIPSFR--CQRTLKSFNTLLHALLTCRQFDAVT 136
+ EP++ ++ + PS+ + F S R + + +++ + + V
Sbjct: 55 ISEPVVLQILR--RNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVP 112
Query: 137 ELAARAGEFGAP-DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRL 195
+L E G D IL+ + G + A + D M G + + + +++ L
Sbjct: 113 DLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIAL 172
Query: 196 CENSRLREA----FELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKD------ 245
+ LR A F+L E + I + + G + EL R D
Sbjct: 173 VKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFK 232
Query: 246 ---EMVK--KGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV------TC 294
E +K K K D YN I+ G + AL + +EM+E + S T
Sbjct: 233 RVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTY 292
Query: 295 NVMIGEYCRENNFEEAYRILD--GVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPR 352
N +I C ++A + D V G +PD Y + + CK + +AM ++ +M
Sbjct: 293 NSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQY 352
Query: 353 RGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFEL 412
G PD + Y L DG + R+ EA + ++M+ +G N + L + G E
Sbjct: 353 NGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEA 412
Query: 413 LSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
T+ DL KG+ + + +V +C+ K+ + +L++ +
Sbjct: 413 GFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEM 455
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 5/192 (2%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRP-DQATFGTLIHRLCENSRLREAFEL 207
D N + +G A +LF+ GV T+ +++ + + A +
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 652
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
++MF F + Y +I+G+ K+G A + D + K+G LD +YNTLINAL
Sbjct: 653 LDQMFENF-CAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALG 711
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVI 325
KA + +EA ++ + M+ G + V+ N MI + +EAY+ L + G P+ +
Sbjct: 712 KATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHV 771
Query: 326 GYNVFLGWLCKE 337
+ L +L KE
Sbjct: 772 -TDTILDYLGKE 782
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/295 (21%), Positives = 115/295 (38%), Gaps = 59/295 (20%)
Query: 221 VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLE 280
T Y+ + + VC+ G L + M + G+ LD + L+++L ++GK E AL VL+
Sbjct: 92 ATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGVLD 151
Query: 281 EMRE-GGCEWNSV-----------------------------------TCNVMIGEYC-- 302
M E G C SV T V+I Y
Sbjct: 152 YMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYLPG 211
Query: 303 ---------------RENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLF 347
+ F+ + L G++ K D YN+ + G A+ LF
Sbjct: 212 TVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGCWGDLDAALSLF 271
Query: 348 HDMPRRGC------APDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFV 401
+M R PD+ TY +L LC + + ++A++V DE+ G+ P + +
Sbjct: 272 KEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILI 331
Query: 402 SELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
C+ + + ++ G + + +++ +L K KV E+ +L + +V
Sbjct: 332 QGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKMV 386
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 3/150 (2%)
Query: 224 YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMR 283
Y +++ K G A + D+M + D A YN +I L K G+ + A VL+ +
Sbjct: 633 YNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLT 692
Query: 284 EGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWS 341
+ G + V N +I + +EA ++ D ++ G+ PDV+ YN + K GK
Sbjct: 693 KQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLK 752
Query: 342 EAMDLFHDMPRRGCAPDVVTYRTLFDGLCR 371
EA M GC P+ VT T+ D L +
Sbjct: 753 EAYKYLKAMLDAGCLPNHVT-DTILDYLGK 781
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 3/161 (1%)
Query: 235 GELSWAFRIKDEMVKKGL-KLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
G+LS A ++ + G+ L + YN+++++ K G + A VL++M E C + T
Sbjct: 608 GDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIAT 667
Query: 294 CNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
NV+I + + A +LD + +G D++ YN + L K + EA LF M
Sbjct: 668 YNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMK 727
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
G PDVV+Y T+ + + + +EA L M+ G P
Sbjct: 728 SNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLP 768
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 110/259 (42%), Gaps = 38/259 (14%)
Query: 62 PEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAV---QTFLSIPSFRCQRTLKS 118
P M+Q+ HQ P+PL A+ S V TFLSI + + L
Sbjct: 561 PYMDQLAHQ------RNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSI--YLSKGDLS- 611
Query: 119 FNTLLHALLTCRQFD-----AVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELF 173
L C+ F+ VT+L + TYN ++ + +G+ A +
Sbjct: 612 --------LACKLFEIFNGMGVTDLTSY----------TYNSMMSSFVKKGYFQTARGVL 653
Query: 174 DEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCK 233
D+M D AT+ +I L + R A + + + ++ V +Y LI + K
Sbjct: 654 DQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIV-MYNTLINALGK 712
Query: 234 IGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
L A ++ D M G+ D YNT+I KAGK +EA + L+ M + GC N VT
Sbjct: 713 ATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 772
Query: 294 CNVM--IGEYCRENNFEEA 310
++ +G+ + F++A
Sbjct: 773 DTILDYLGKEMEKARFKKA 791
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 78/191 (40%), Gaps = 4/191 (2%)
Query: 254 LDAALYNTLINALFKAGKKEEALRVLEEMREGGC-EWNSVTCNVMIGEYCRENNFEEAYR 312
D + NT ++ G A ++ E G + S T N M+ + ++ F+ A
Sbjct: 592 FDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARG 651
Query: 313 ILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLC 370
+LD + D+ YNV + L K G+ A + + ++G D+V Y TL + L
Sbjct: 652 VLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALG 711
Query: 371 RWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEG 430
+ + EA + D M G P + N + + G + L + G + N
Sbjct: 712 KATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNH- 770
Query: 431 IWDVVLSMVCK 441
+ D +L + K
Sbjct: 771 VTDTILDYLGK 781
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 173/396 (43%), Gaps = 11/396 (2%)
Query: 64 MEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRC-QRTLKSFNTL 122
ME VL ++ LD H L+ V+ + AR+P A + F + +++N++
Sbjct: 148 MEAVLDEMKLDLSH----DLIVEVLERFRHARKP--AFRFFCWAAERQGFAHDSRTYNSM 201
Query: 123 LHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVR 182
+ L RQF+ + + G G T+ I ++A +A +F+ M+ +
Sbjct: 202 MSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFK 261
Query: 183 PDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFR 242
T L+ L +EA L +++ F + YT L+ G C++ L A R
Sbjct: 262 IGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPN--MMTYTVLLNGWCRVRNLIEAAR 319
Query: 243 IKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYC 302
I ++M+ +GLK D +N ++ L ++ KK +A+++ M+ G N + +MI ++C
Sbjct: 320 IWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFC 379
Query: 303 RENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVV 360
++++ E A D + G++PD Y + + K +L +M +G PD
Sbjct: 380 KQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGK 439
Query: 361 TYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDL 420
TY L + + A + ++M+ P N + N+E+ V ++
Sbjct: 440 TYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEM 499
Query: 421 TSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
KG ++ + V++ + K E+ L+ ++
Sbjct: 500 IKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEML 535
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/397 (22%), Positives = 173/397 (43%), Gaps = 11/397 (2%)
Query: 41 FRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRA 100
F H +Y+ +++ L + + M VL ++ T+ + + +A A++ +A
Sbjct: 191 FAHDSRTYNSMMSILAKTRQFETMVSVLEEM--GTKGLLTMETFTIAMKAFAAAKERKKA 248
Query: 101 VQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRAS 160
V F + ++ + +++ N LL +L + L + E P+ TY +L+
Sbjct: 249 VGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGW 308
Query: 161 CLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEG- 219
C + A ++++M +G++PD ++ L + + +A +L F K +G
Sbjct: 309 CRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKL----FHVMKSKGP 364
Query: 220 --CVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALR 277
V YT +I+ CK + A D+MV GL+ DAA+Y LI K +
Sbjct: 365 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 424
Query: 278 VLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLC 335
+L+EM+E G + T N +I + E A RI + + ++P + +N+ +
Sbjct: 425 LLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYF 484
Query: 336 KEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSK 395
+ ++ +M ++G PD +Y L GL + REA L+EM+ KG
Sbjct: 485 MARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLI 544
Query: 396 NLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIW 432
+ N F ++ + G E+ + GK I+
Sbjct: 545 DYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIF 581
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/433 (24%), Positives = 195/433 (45%), Gaps = 22/433 (5%)
Query: 42 RHSLLSYDLIITKLGRAKMLPEMEQVLHQ--LHLDTRHR-VP--EPLLCHVITFYARARQ 96
R L+ +D T + KML E+ ++ H + LD + VP E + +I Y +A
Sbjct: 142 RSGLIRHDRD-THMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGI 200
Query: 97 PSRAVQTFLSIPSFRCQRTLKSFNTLLHALLT-CRQFDAVTELAARAGEFGAPDACTYNI 155
+V+ F + +RT+KS+N+L +L R A E P TYN+
Sbjct: 201 VQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNL 260
Query: 156 LIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREF 215
++ L + A F++M++RG+ PD ATF T+I+ C ++ EA +L EM +
Sbjct: 261 MLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEM-KGN 319
Query: 216 KLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEA 275
K+ V YT +IKG + + RI +EM G++ +A Y+TL+ L AGK EA
Sbjct: 320 KIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEA 379
Query: 276 LRVLEEM--REGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFL 331
+L+ M + + NS+ +++ + + + A +L + V + Y V +
Sbjct: 380 KNILKNMMAKHIAPKDNSIFLKLLVSQ-SKAGDMAAATEVLKAMATLNVPAEAGHYGVLI 438
Query: 332 GWLCKEGKWSEAMDLFHDMPRRGCA---PDVV-----TYRTLFDGLCRWRQFREAVVVLD 383
CK ++ A+ L + + D + Y + + LC Q +A V+
Sbjct: 439 ENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFR 498
Query: 384 EMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPE 443
++M +G LN + +EGN + +L ++ +G +++++
Sbjct: 499 QLMKRGVQD-QDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELLIKSYMSKG 557
Query: 444 KVPESFELLDALV 456
+ ++ LD++V
Sbjct: 558 EPGDAKTALDSMV 570
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 131/327 (40%), Gaps = 16/327 (4%)
Query: 118 SFNTLLHALLTCRQFDAVTEL-AARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEM 176
+FNT+++ ++ D +L G P +Y +I+ D +F+EM
Sbjct: 292 TFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEM 351
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
RS G+ P+ T+ TL+ LC+ ++ EA + + M + +I+ L+ K G+
Sbjct: 352 RSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGD 411
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEM--------REGGCE 288
++ A + M + +A Y LI KA A+++L+ + + E
Sbjct: 412 MAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLE 471
Query: 289 WNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDL 346
N +I C +A + + GV+ D N + KEG + ++
Sbjct: 472 MEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEI 530
Query: 347 FHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQ 406
M RRG + Y L + +A LD M+ G+ P S + + L +
Sbjct: 531 LKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFE 590
Query: 407 EGNFELLSTVLSDLTSKGKICNEGIWD 433
+G + S V+ + K N GI D
Sbjct: 591 DGRVQTASRVMMIMIDK----NVGIED 613
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 163/359 (45%), Gaps = 22/359 (6%)
Query: 87 VITFYARARQPSRAVQTFLSIPSF----RCQRTLKSFNTLLHALLTCRQF---DAVTELA 139
+I YARA +A++ F S+ + L+ LL AL C++ +A L
Sbjct: 179 LIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDAL--CKEGHVREASMYLE 236
Query: 140 ARAGEFGA---PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLC 196
G + P +NIL+ +A +L++EM++ V+P T+GTLI C
Sbjct: 237 RIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYC 296
Query: 197 ENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDA 256
R++ A E+ EEM + ++E ++ +I G+ + G LS A + +
Sbjct: 297 RMRRVQIAMEVLEEM-KMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTI 355
Query: 257 ALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA----YR 312
YN+L+ KAG A ++L+ M G + + T N + + N EE ++
Sbjct: 356 VTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFK 415
Query: 313 ILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRW 372
+++ G PD + Y++ L LC++GK S AM + +M RG PD++T L LCR
Sbjct: 416 LIEA--GHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRL 473
Query: 373 RQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFEL---LSTVLSDLTSKGKICN 428
EA D + +G P + L +G ++ LS+++S L K+ N
Sbjct: 474 EMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSKKLPN 532
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 149/374 (39%), Gaps = 57/374 (15%)
Query: 82 PLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELA-- 139
P+L H + +A + P F +L F++++++L R+F+ L
Sbjct: 115 PMLLHSVFKWAEMK------------PGFTLSPSL--FDSVVNSLCKAREFEIAWSLVFD 160
Query: 140 -ARAGE-FGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQAT----FGTLIH 193
R+ E A T+ +LIR G +A F+ RS AT L+
Sbjct: 161 RVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLD 220
Query: 194 RLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLK 253
LC+ +REA ++Y I G + +W ++
Sbjct: 221 ALCKEGHVREA-----------------SMYLERIGGTM---DSNWVPSVR--------- 251
Query: 254 LDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRI 313
++N L+N F++ K ++A ++ EEM+ + VT +I YCR + A +
Sbjct: 252 ----IFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEV 307
Query: 314 LDGVEGVKPDV--IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCR 371
L+ ++ + ++ + +N + L + G+ SEA+ + P +VTY +L C+
Sbjct: 308 LEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK 367
Query: 372 WRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGI 431
A +L MM +G P + N F + E + L G +
Sbjct: 368 AGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLT 427
Query: 432 WDVVLSMVCKPEKV 445
+ ++L M+C+ K+
Sbjct: 428 YHLILKMLCEDGKL 441
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 151/355 (42%), Gaps = 39/355 (10%)
Query: 96 QPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYN 154
+P A F ++ + +L ++ TL+ AL + F ++ L ++ + G PD +N
Sbjct: 334 RPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFN 393
Query: 155 ILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFRE 214
+I AS G+ D+A ++F++M+ G +P +TF TLI + +L E+ L + M R+
Sbjct: 394 AIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRD 453
Query: 215 FKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTL------------ 262
L+ L++ C ++ A+ I +M G+K D +NTL
Sbjct: 454 EMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCT 513
Query: 263 ------------------------INALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMI 298
+N + GK EEALR M+E G N N +I
Sbjct: 514 AEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLI 573
Query: 299 GEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCA 356
+ N+ + ++D +E GVKPDV+ ++ + G +++ DM G
Sbjct: 574 KGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGID 633
Query: 357 PDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
PD+ + L G R + +A +L++M G P +S C G +
Sbjct: 634 PDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMK 688
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 174/386 (45%), Gaps = 17/386 (4%)
Query: 22 PSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPE 81
P A +F N + H+P SL++Y ++T L R K + ++ ++ + P+
Sbjct: 335 PQEAHSIF-NTLIEEGHKP---SLITYTTLVTALTRQKHFHSLLSLISKVEKNGLK--PD 388
Query: 82 PLLCH-VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAA 140
+L + +I + + +A++ F + C+ T +FNTL+ + + + L
Sbjct: 389 TILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLD 448
Query: 141 RA--GEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCEN 198
E P+ T NIL++A C + + A+ + +M+S GV+PD TF TL
Sbjct: 449 MMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARI 508
Query: 199 SRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAAL 258
A ++ K++ V ++ G C+ G++ A R M + G+ + +
Sbjct: 509 GSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFV 568
Query: 259 YNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNF---EEAYR-IL 314
+N+LI + V++ M E G + + VT + ++ + + EE Y +L
Sbjct: 569 FNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDML 628
Query: 315 DGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQ 374
+G G+ PD+ +++ + G+ +A + + M + G P+VV Y + G C +
Sbjct: 629 EG--GIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGE 686
Query: 375 FREAVVVLDEMMFKGYAPLSKNLNAF 400
++A+ V +M G LS NL +
Sbjct: 687 MKKAMQVYKKMC--GIVGLSPNLTTY 710
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 5/225 (2%)
Query: 191 LIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKK 250
L++ L E R +EA + + E +T YT L+ + + + ++ K
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLIT-YTTLVTALTRQKHFHSLLSLISKVEKN 383
Query: 251 GLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA 310
GLK D L+N +INA ++G ++A+++ E+M+E GC+ + T N +I Y + EE+
Sbjct: 384 GLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEES 443
Query: 311 YRILDGV---EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFD 367
R+LD + E ++P+ N+ + C + K EA ++ + M G PDVVT+ TL
Sbjct: 444 SRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAK 503
Query: 368 GLCRWRQFREAV-VVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
R A +++ M+ P + V+ C+EG E
Sbjct: 504 AYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKME 548
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 123/301 (40%), Gaps = 40/301 (13%)
Query: 163 RGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVT 222
RG A +F+ + G +P T+ TL+ L L ++ + L+
Sbjct: 332 RGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKN-GLKPDTI 390
Query: 223 IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEM 282
++ +I + G L A +I ++M + G K A+ +NTLI K GK EE+ R+L+ M
Sbjct: 391 LFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMM 450
Query: 283 -REGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVF--------- 330
R+ + N TCN+++ +C + EEA+ I+ ++ GVKPDV+ +N
Sbjct: 451 LRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGS 510
Query: 331 ---------------------------LGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYR 363
+ C+EGK EA+ F+ M G P++ +
Sbjct: 511 TCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFN 570
Query: 364 TLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSK 423
+L G V+D M G P + ++ G+ + + +D+
Sbjct: 571 SLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEG 630
Query: 424 G 424
G
Sbjct: 631 G 631
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 178/409 (43%), Gaps = 25/409 (6%)
Query: 13 SSLLRSQKDPSV------AFQLF-LNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEME 65
S+LL ++ SV +FQL P PQ +Y +I L ++ L +
Sbjct: 44 SNLLTDSENASVMRTLLSSFQLHNCEPTPQ-----------AYRFVIKTLAKSSQLENIS 92
Query: 66 QVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHA 125
VL+ L + + PE + VI Y + + A++ F IP+FRC + + N LL
Sbjct: 93 SVLYHLEVSEKFDTPESIFRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLV 152
Query: 126 LLTCRQ-FDAVTELAARAGEFGAP-DACTYNILIRASCLRGHADRAFELFDEMRSRGVRP 183
L+ RQ + V E+ +A G + T+ ILI A C G D A EL M V
Sbjct: 153 LVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIV 212
Query: 184 DQATFGTLIHRLC--ENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAF 241
D + L+ +C ++S + E++ R+ + + YT +++ + + G
Sbjct: 213 DPRLYSRLLSSVCKHKDSSCFDVIGYLEDL-RKTRFSPGLRDYTVVMRFLVEGGRGKEVV 271
Query: 242 RIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEY 301
+ ++M ++ D Y ++ + +A ++ +E+ G + T NV I
Sbjct: 272 SVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGL 331
Query: 302 CRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDV 359
C++N+ E A +++ + G +P+V+ YN+ + L K G S A L+ +M G +
Sbjct: 332 CKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNS 391
Query: 360 VTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEG 408
T+ + + A +L+E S + +S LC++G
Sbjct: 392 HTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVKSSRIEEVISRLCEKG 440
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 142/321 (44%), Gaps = 22/321 (6%)
Query: 41 FRHSLLSYDLIITKLGRAKMLPEMEQVL-HQLHLDTRHRVPEPLLCHVITFYARARQPSR 99
FR Y I +L AK +++VL +Q D E + ++ Y +
Sbjct: 83 FRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIK--SEDFVIRIMLLYGYSGMAEH 140
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAV----TELAARAGEFGAPDACTYNI 155
A + F +P C+RT+KSFN LL A + ++ D EL + G PD TYN
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLG--ITPDLVTYNT 198
Query: 156 LIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKE---EMF 212
+I+A C +G D +F+E+ G PD +F TL+ RE F + ++
Sbjct: 199 MIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYR----RELFVEGDRIWDLM 254
Query: 213 REFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKK 272
+ L + Y + ++G+ + + + A + D M +G+ D YN LI A
Sbjct: 255 KSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNL 314
Query: 273 EEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIG----YN 328
EE ++ EM+E G ++VT ++I C++ + + A + + E +K ++ Y
Sbjct: 315 EEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSE--EAIKHKLLSRPNMYK 372
Query: 329 VFLGWLCKEGKWSEAMDLFHD 349
+ L GK EA L +
Sbjct: 373 PVVERLMGAGKIDEATQLVKN 393
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 124/283 (43%), Gaps = 9/283 (3%)
Query: 109 SFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGH--- 165
SFR L ++ + L ++F + E+ +F D + + +IR L G+
Sbjct: 82 SFRQVHGL--YSAFIRRLREAKKFSTIDEVLQYQKKFD--DIKSEDFVIRIMLLYGYSGM 137
Query: 166 ADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYT 225
A+ A +LFDEM +F L+ + +L EA + +E+ + + + Y
Sbjct: 138 AEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYN 197
Query: 226 NLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREG 285
+IK +C+ G + I +E+ K G + D +NTL+ ++ E R+ + M+
Sbjct: 198 TMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSK 257
Query: 286 GCEWNSVTCNVMIGEYCRENNFEEAYRILD--GVEGVKPDVIGYNVFLGWLCKEGKWSEA 343
N + N + R F +A ++D EG+ PDV YN + + E
Sbjct: 258 NLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEV 317
Query: 344 MDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMM 386
M +++M +G PD VTY L LC+ AV V +E +
Sbjct: 318 MKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAI 360
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 131/279 (46%), Gaps = 8/279 (2%)
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFEL--KEEMFREFKLEGCVTIYTNLIKGVCKIG 235
S R + I RL E + E+ ++ F + K E V I L+ G +
Sbjct: 80 SESFRQVHGLYSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFV-IRIMLLYGYSGMA 138
Query: 236 ELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREG-GCEWNSVTC 294
E A ++ DEM + + +N L++A + K +EA++ +E+ E G + VT
Sbjct: 139 E--HAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTY 196
Query: 295 NVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPR 352
N MI CR+ + ++ I + +E G +PD+I +N L + + E ++ M
Sbjct: 197 NTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKS 256
Query: 353 RGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFEL 412
+ +P++ +Y + GL R ++F +A+ ++D M +G +P NA ++ + N E
Sbjct: 257 KNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEE 316
Query: 413 LSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFEL 451
+ +++ KG + + +++ ++CK + + E+
Sbjct: 317 VMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEV 355
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 6/137 (4%)
Query: 116 LKSFNTLLHALLTCRQF-DAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFD 174
++S+N+ + L ++F DA+ + E +PD TYN LI A + + + + ++
Sbjct: 263 IRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYN 322
Query: 175 EMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKI 234
EM+ +G+ PD T+ LI LC+ L A E+ EE + KL +Y +++ +
Sbjct: 323 EMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKH-KLLSRPNMYKPVVERLMGA 381
Query: 235 GELSWAFRIKDEMVKKG 251
G++ A ++VK G
Sbjct: 382 GKIDEA----TQLVKNG 394
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 161/389 (41%), Gaps = 54/389 (13%)
Query: 81 EPLLCHVITFYARARQPSRAVQTFLSIPS-FRCQRTLKSFNTLLHALLTCRQFDAVTELA 139
+ +C +T Y+ Q + ++ S FR T ++FN ++ L +F+ L
Sbjct: 47 QKTVCEALTCYSNDWQKALEFFNWVERESGFR--HTTETFNRVIDILGKYFEFEISWALI 104
Query: 140 AR--AGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCE 197
R P+ T+ I+ + A + +D++ +R D+ +F L+ LCE
Sbjct: 105 NRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLR-DETSFYNLVDALCE 163
Query: 198 NSRLREAFELK----------------------------------EEMFREFKLEGCV-- 221
+ + EA EL +E +++ EG
Sbjct: 164 HKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKD 223
Query: 222 ----TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALR 277
+IY +++ CK G+ A ++ EM + +KLD YNT+I A+ + E +R
Sbjct: 224 LFSYSIYMDIM---CKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIR 280
Query: 278 VLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLC 335
V EMRE GCE N T N +I C + +AYR+LD + G +PD I Y L
Sbjct: 281 VFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLE 340
Query: 336 KEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSK 395
K SE + LF M R G P + TY L RW + + V M G P S
Sbjct: 341 KP---SEILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSA 397
Query: 396 NLNAFVSELCQEGNFELLSTVLSDLTSKG 424
NA + L Q+G ++ ++ +G
Sbjct: 398 AYNAVIDALIQKGMLDMAREYEEEMIERG 426
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 155/363 (42%), Gaps = 21/363 (5%)
Query: 41 FRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVI-TFYARARQPSR 99
FRH+ +++ +I LG+ E+ L + VP + ++ Y A
Sbjct: 77 FRHTTETFNRVIDILGKYFEF-EISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQE 135
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELA----ARAGEFGAPDACTYNI 155
A+ + + F R SF L+ AL + EL F + +N+
Sbjct: 136 AIDAYDKLDDFNL-RDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNL 194
Query: 156 LIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM-FRE 214
++R G + E + +M + GV D ++ + +C++ + +A +L +EM R
Sbjct: 195 ILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRR 254
Query: 215 FKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEE 274
KL+ V Y +I+ + + + R+ EM ++G + + A +NT+I L + G+ +
Sbjct: 255 MKLD--VVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRD 312
Query: 275 ALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV-----EGVKPDVIGYNV 329
A R+L+EM + GC+ +S+T C + E+ IL GV+P + Y +
Sbjct: 313 AYRMLDEMPKRGCQPDSITY------MCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVM 366
Query: 330 FLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKG 389
+ + G + ++ M G PD Y + D L + A +EM+ +G
Sbjct: 367 LMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERG 426
Query: 390 YAP 392
+P
Sbjct: 427 LSP 429
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 171/396 (43%), Gaps = 11/396 (2%)
Query: 64 MEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRC-QRTLKSFNTL 122
ME VL ++ LD H L+ V+ + AR+P A + F + +++N++
Sbjct: 148 MEAVLDEMKLDLSH----DLIVEVLERFRHARKP--AFRFFCWAAERQGFAHASRTYNSM 201
Query: 123 LHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVR 182
+ L RQF+ + + G G T+ I ++A +A +F+ M+ +
Sbjct: 202 MSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFK 261
Query: 183 PDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFR 242
T L+ L +EA L +++ F + YT L+ G C++ L A R
Sbjct: 262 IGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPN--MMTYTVLLNGWCRVRNLIEAAR 319
Query: 243 IKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYC 302
I ++M+ GLK D +N ++ L ++ KK +A+++ M+ G N + +MI ++C
Sbjct: 320 IWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFC 379
Query: 303 RENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVV 360
++++ E A D + G++PD Y + + K +L +M +G PD
Sbjct: 380 KQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGK 439
Query: 361 TYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDL 420
TY L + + + ++M+ P N + N+E+ V ++
Sbjct: 440 TYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEM 499
Query: 421 TSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
KG ++ + V++ + K E+ L+ ++
Sbjct: 500 IKKGICPDDNSYTVLIRGLISEGKSREACRYLEEML 535
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/409 (22%), Positives = 175/409 (42%), Gaps = 14/409 (3%)
Query: 41 FRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRA 100
F H+ +Y+ +++ L + + M VL ++ T+ + + +A A++ +A
Sbjct: 191 FAHASRTYNSMMSILAKTRQFETMVSVLEEM--GTKGLLTMETFTIAMKAFAAAKERKKA 248
Query: 101 VQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRAS 160
V F + ++ + +++ N LL +L + L + E P+ TY +L+
Sbjct: 249 VGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGW 308
Query: 161 CLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEG- 219
C + A ++++M G++PD ++ L + + +A +L F K +G
Sbjct: 309 CRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL----FHVMKSKGP 364
Query: 220 --CVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALR 277
V YT +I+ CK + A D+MV GL+ DAA+Y LI K +
Sbjct: 365 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 424
Query: 278 VLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLC 335
+L+EM+E G + T N +I + E RI + + ++P + +N+ +
Sbjct: 425 LLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYF 484
Query: 336 KEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSK 395
+ ++ +M ++G PD +Y L GL + REA L+EM+ KG
Sbjct: 485 VARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLI 544
Query: 396 NLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGI---WDVVLSMVCK 441
+ N F ++ + G E+ + GK I W + CK
Sbjct: 545 DYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIFARWAQMTRRRCK 593
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 171/396 (43%), Gaps = 11/396 (2%)
Query: 64 MEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRC-QRTLKSFNTL 122
ME VL ++ LD H L+ V+ + AR+P A + F + +++N++
Sbjct: 147 MEAVLDEMKLDLSH----DLIVEVLERFRHARKP--AFRFFCWAAERQGFAHDSRTYNSM 200
Query: 123 LHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVR 182
+ L RQF+ + + G G T+ I ++A +A +F+ M+ +
Sbjct: 201 MSILAKTRQFETMVSVLEEMGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFK 260
Query: 183 PDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFR 242
T L+ L +EA L +++ F + YT L+ G C++ L A R
Sbjct: 261 IGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPN--MMTYTVLLNGWCRVRNLIEAAR 318
Query: 243 IKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYC 302
I ++M+ GLK D +N ++ L ++ KK +A+++ M+ G N + +MI ++C
Sbjct: 319 IWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFC 378
Query: 303 RENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVV 360
++++ E A D + G++PD Y + + K +L +M +G PD
Sbjct: 379 KQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGK 438
Query: 361 TYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDL 420
TY L + + + ++M+ P N + N+E+ V ++
Sbjct: 439 TYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEM 498
Query: 421 TSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
KG ++ + V++ + K E+ L+ ++
Sbjct: 499 IKKGICPDDNSYTVLIRGLISEGKSREACRYLEEML 534
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 171/397 (43%), Gaps = 11/397 (2%)
Query: 41 FRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRA 100
F H +Y+ +++ L + + M VL ++ T+ + + +A A++ +A
Sbjct: 190 FAHDSRTYNSMMSILAKTRQFETMVSVLEEM--GTKGLLTMETFTIAMKAFAAAKERKKA 247
Query: 101 VQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRAS 160
V F + ++ + +++ N LL +L + L + E P+ TY +L+
Sbjct: 248 VGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGW 307
Query: 161 CLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEG- 219
C + A ++++M G++PD ++ L + + +A +L F K +G
Sbjct: 308 CRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKL----FHVMKSKGP 363
Query: 220 --CVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALR 277
V YT +I+ CK + A D+MV GL+ DAA+Y LI K +
Sbjct: 364 CPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 423
Query: 278 VLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLC 335
+L+EM+E G + T N +I + E RI + + ++P + +N+ +
Sbjct: 424 LLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYF 483
Query: 336 KEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSK 395
+ ++ +M ++G PD +Y L GL + REA L+EM+ KG
Sbjct: 484 VARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLI 543
Query: 396 NLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIW 432
+ N F ++ + G E+ + GK I+
Sbjct: 544 DYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEIF 580
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 153/351 (43%), Gaps = 13/351 (3%)
Query: 115 TLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELF 173
++ + N + LL + D ++ G + T+N++I + C A +F
Sbjct: 182 SVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVF 241
Query: 174 DEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFR---EFKLEGCVTIYTNLIKG 230
M GV P+ +F +I C+ +R A +L +M F VT Y ++I G
Sbjct: 242 YRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVT-YNSVING 300
Query: 231 VCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWN 290
CK G L A RI+ +MVK G+ + Y L++A +AG +EALR+ +EM G N
Sbjct: 301 FCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVN 360
Query: 291 SVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFH 348
+V N ++ E + E A +L + + ++ D + + LC+ G EA++
Sbjct: 361 TVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQR 420
Query: 349 DMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEG 408
+ + D+V + TL R ++ A +L M+ +G + + + + +EG
Sbjct: 421 QISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEG 480
Query: 409 NFELLSTVLSDLTSKGKICNEGIWDVVLS------MVCKPEKVPESFELLD 453
E + + K N I++ +++ M E V + E+ D
Sbjct: 481 KLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKD 531
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 125/281 (44%), Gaps = 40/281 (14%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
+ YN ++ + G + A + +M S+ ++ D+ T ++ LC N ++EA E +
Sbjct: 360 NTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQ 419
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
++ E KL + + L+ + +L+ A +I M+ +GL LDA + TLI+ K
Sbjct: 420 RQI-SEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLK 478
Query: 269 AGKKEEALRVLEEMRE-----------------------GGCEW--------NSVTCNVM 297
GK E AL + + M + G E + VT N +
Sbjct: 479 EGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTL 538
Query: 298 IGEYCRENNFEEAYRIL------DGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
+ E + N EEA IL DG + V ++ +N+ + LCK G + +A ++ M
Sbjct: 539 LNESLKTGNVEEADDILSKMQKQDGEKSVS--LVTFNIMINHLCKFGSYEKAKEVLKFMV 596
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
RG PD +TY TL + R + V + D ++ +G P
Sbjct: 597 ERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTP 637
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/349 (22%), Positives = 156/349 (44%), Gaps = 17/349 (4%)
Query: 118 SFNTLLHALLTCRQFDA------VTELAARAGEFGAPDACTYNILIRASCLRGHADRAFE 171
SFN ++ C+ D + ++ +G F +P+A TYN +I C G D A
Sbjct: 255 SFNMMIDG--ACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAER 312
Query: 172 LFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGV 231
+ +M GV ++ T+G L+ EA L +EM + + V IY +++ +
Sbjct: 313 IRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTV-IYNSIVYWL 371
Query: 232 CKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNS 291
G++ A + +M K +++D ++ L + G +EA+ ++ E +
Sbjct: 372 FMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDI 431
Query: 292 VTCNVMIGEYCRENNFEEAYRILDG--VEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHD 349
V N ++ + R+ A +IL V+G+ D I + + KEGK A++++
Sbjct: 432 VCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDG 491
Query: 350 MPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGN 409
M + ++V Y ++ +GL + A V++ M K N ++E + GN
Sbjct: 492 MIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVT----YNTLLNESLKTGN 547
Query: 410 FELLSTVLSDLTSKG--KICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
E +LS + + K + ++++++ +CK ++ E+L +V
Sbjct: 548 VEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMV 596
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 172/417 (41%), Gaps = 51/417 (12%)
Query: 62 PEMEQVLHQ-LHLDTRHRVPEPLLCHVITFYARARQP--SRAVQTFLSIPSF-------- 110
PE E +L L L+ R R L H F + P SR ++ F S P
Sbjct: 26 PEPEDILFSALCLNLRQRRWNTL--H--QFSSSLTNPLISRVLREFRSSPKLALEFYNWV 81
Query: 111 -RCQRTLKSFN------TLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLR 163
R KS N ++H L+ R+FD + A ++L + +R
Sbjct: 82 LRSNTVAKSENRFEASCVMIHLLVGSRRFDDALSIMANLMSVEGEKLSPLHVL--SGLIR 139
Query: 164 GHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEG-CVT 222
+ ++ G PD F +L+ +N + A+E+ E+ + EG CV+
Sbjct: 140 SY-----------QACGSSPD--VFDSLVRACTQNGDAQGAYEVIEQT----RAEGFCVS 182
Query: 223 IY--TNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLE 280
++ N + + + E+ +++ EM G + +N +I + K K EAL V
Sbjct: 183 VHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFY 242
Query: 281 EMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG------VKPDVIGYNVFLGWL 334
M + G N V+ N+MI C+ + A ++L G G V P+ + YN +
Sbjct: 243 RMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLL-GKMGMMSGNFVSPNAVTYNSVINGF 301
Query: 335 CKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLS 394
CK G+ A + DM + G + TY L D R EA+ + DEM KG +
Sbjct: 302 CKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNT 361
Query: 395 KNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFEL 451
N+ V L EG+ E +VL D+ SK + +V+ +C+ V E+ E
Sbjct: 362 VIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEF 418
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/369 (23%), Positives = 157/369 (42%), Gaps = 43/369 (11%)
Query: 14 SLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHL 73
SLL+S+KDP ++ + + R R +++ + L K + +L
Sbjct: 52 SLLKSEKDPDRILEICRAASLTPDCRIDR---IAFSAAVENLAEKKHFSAVSNLLDGFIE 108
Query: 74 DTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFD 133
+ E H I YA+A +++ F + F RT+KS N LL A L + +
Sbjct: 109 NRPDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYK 168
Query: 134 AVTELAARAGE-FG-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTL 191
+ + +G PD TYN +I+ C G A ++ + EM +G++P+ ++FG +
Sbjct: 169 EAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLM 228
Query: 192 IHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKG 251
I + E +G ++ M +G
Sbjct: 229 ISGFYAEDKSDE------------------------------VG------KVLAMMKDRG 252
Query: 252 LKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAY 311
+ + + YN I +L K K +EA +L+ M G + N+VT + +I +C E++FEEA
Sbjct: 253 VNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAK 312
Query: 312 RILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGL 369
++ + G KPD Y + +LCK G + A+ L + + P ++L +GL
Sbjct: 313 KLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGL 372
Query: 370 CRWRQFREA 378
+ + EA
Sbjct: 373 AKDSKVEEA 381
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 145/331 (43%), Gaps = 12/331 (3%)
Query: 108 PSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHA- 166
P R R +F+ + L + F AV+ L E PD + A L A
Sbjct: 74 PDCRIDRI--AFSAAVENLAEKKHFSAVSNLLDGFIE-NRPDLKSERFAAHAIVLYAQAN 130
Query: 167 --DRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIY 224
D + +F ++ + + L+ +EA + EM + + +E + Y
Sbjct: 131 MLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETY 190
Query: 225 TNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMRE 284
+IK C+ G S ++ I EM +KG+K +++ + +I+ + K +E +VL M++
Sbjct: 191 NRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKD 250
Query: 285 GGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSE 342
G T N+ I C+ +EA +LDG+ G+KP+ + Y+ + C E + E
Sbjct: 251 RGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEE 310
Query: 343 AMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVS 402
A LF M RGC PD Y TL LC+ F A+ + E M K + P + + V+
Sbjct: 311 AKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVN 370
Query: 403 ELCQEGNF----ELLSTVLSDLTSKGKICNE 429
L ++ EL+ V T ++ NE
Sbjct: 371 GLAKDSKVEEAKELIGQVKEKFTRNVELWNE 401
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 102/216 (47%), Gaps = 3/216 (1%)
Query: 240 AFRIKDEMVKK-GLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMI 298
A R+ EM K G++ D YN +I ++G + ++ EM G + NS + +MI
Sbjct: 170 AKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMI 229
Query: 299 GEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCA 356
+ E+ +E ++L ++ GV V YN+ + LCK K EA L M G
Sbjct: 230 SGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMK 289
Query: 357 PDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTV 416
P+ VTY L G C F EA + M+ +G P S+ + LC+ G+FE ++
Sbjct: 290 PNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSL 349
Query: 417 LSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+ K + + I +++ + K KV E+ EL+
Sbjct: 350 CKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELI 385
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 3/161 (1%)
Query: 301 YCRENNFEEAYRILDGVEG--VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR-GCAP 357
Y + N + + R+ +E + V N L + EA ++ +MP+ G P
Sbjct: 126 YAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEP 185
Query: 358 DVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVL 417
D+ TY + C + ++ EM KG P S + +S E + + VL
Sbjct: 186 DLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVL 245
Query: 418 SDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALVLA 458
+ + +G +++ + +CK +K E+ LLD ++ A
Sbjct: 246 AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSA 286
>AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8034036-8035292 REVERSE
LENGTH=418
Length = 418
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 167/383 (43%), Gaps = 51/383 (13%)
Query: 2 ATPKPISPFRLSSLLRSQKDPSVAFQLFLN-PNPQTNHRPFRHSLLSYDLIITKLGRAKM 60
A P I+ + S LR +DP A ++ + N T+ R+++ +L + +L +++
Sbjct: 26 AYPGAITMSKAKSKLRKVQDPDKALAIYKSVSNNSTSPLSSRYAM---ELTVQRLAKSQR 82
Query: 61 LPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFN 120
++E ++ H + E L +I Y RA A++ F + RT+ SFN
Sbjct: 83 FSDIEALIES-HKNNPKIKTETFLSTLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFN 141
Query: 121 TLLHALLTCRQFDAVTEL----AARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEM 176
LL A L F+ V +L R PD +Y +LI++ C G ++A E+ +M
Sbjct: 142 ALLAACLHSDLFERVPQLFDEFPQRYNNI-TPDKISYGMLIKSYCDSGKPEKAMEIMRDM 200
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
+GV F T++ L +N + EA L
Sbjct: 201 EVKGVEVTIIAFTTILGSLYKNGLVDEAESL----------------------------- 231
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNT-LINALFKAGKKEEALRVLEEMREGGCEWNSVTCN 295
W EMV KG LD +YN L+NA ++ ++ + L +EEM G + ++V+ N
Sbjct: 232 --WI-----EMVNKGCDLDNTVYNVRLMNAAKESPERVKEL--MEEMSSVGLKPDTVSYN 282
Query: 296 VMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGC 355
++ YC + EA ++ +G+E +P+ + + LC G + + + +F
Sbjct: 283 YLMTAYCVKGMMSEAKKVYEGLE--QPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHK 340
Query: 356 APDVVTYRTLFDGLCRWRQFREA 378
PD T + L +GL + + +A
Sbjct: 341 IPDFKTCKHLTEGLVKNNRMEDA 363
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 4/134 (2%)
Query: 260 NTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDG--- 316
+TLI + +A + A+++ EEM + G V+ N ++ + FE ++ D
Sbjct: 106 STLIRSYGRASMFDHAMKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQ 165
Query: 317 -VEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQF 375
+ PD I Y + + C GK +AM++ DM +G ++ + T+ L +
Sbjct: 166 RYNNITPDKISYGMLIKSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLV 225
Query: 376 REAVVVLDEMMFKG 389
EA + EM+ KG
Sbjct: 226 DEAESLWIEMVNKG 239
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 175/429 (40%), Gaps = 35/429 (8%)
Query: 8 SPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAK-------- 59
+P L R Q + AF+ F Q + + H ++Y+ +I L K
Sbjct: 125 TPVVCKILQRLQYEEKTAFRFFTWAGHQEH---YSHEPIAYNEMIDILSSTKYKNKQFRI 181
Query: 60 ---MLPEMEQ-----VLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFR 111
ML M++ VL + L+ + E L HV F R R +
Sbjct: 182 VIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTHVQKFAKRKR------------IRVK 229
Query: 112 CQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFE 171
Q + +FN LL AL C L R PDA T+N+L C +A +
Sbjct: 230 TQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAMK 289
Query: 172 LFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVT--IYTNLIK 229
L +EM G +P+ T+ I C+ + EA +L + M + T + +I
Sbjct: 290 LLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIV 349
Query: 230 GVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEW 289
+ K + F + M+ G D + Y +I + A K +EA + L+EM G
Sbjct: 350 ALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPP 409
Query: 290 NSVTCNVMIGEYCRENNFEEAYRILDGVEGVK--PDVIGYNVFLGWLCKEGKWSEAMDLF 347
+ VT N + C +EA ++ + + P V YN+ + + A + +
Sbjct: 410 DIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTW 469
Query: 348 HDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQE 407
+M +R C DV TY + +GL + +EA +L+E++ KG + ++F+ L +
Sbjct: 470 TEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEV 529
Query: 408 GNFELLSTV 416
GN + + V
Sbjct: 530 GNLKAIHKV 538
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 94/241 (39%), Gaps = 41/241 (17%)
Query: 221 VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLE 280
+ + L+ +CK G + + M + +K DA +N L + ++A+++LE
Sbjct: 234 INAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAMKLLE 292
Query: 281 EMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILD-----GVEGVKPDVIGYNVFLGWLC 335
EM E G + + T I +C+ +EA + D G P + + + L
Sbjct: 293 EMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALA 352
Query: 336 KEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSK 395
K K E +L M GC PDV TY+ + +G+C + EA LDEM KGY P
Sbjct: 353 KNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIV 412
Query: 396 NLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
N F L ++C+ K E+ +L +
Sbjct: 413 TYNCF-----------------------------------LRVLCENRKTDEALKLYGRM 437
Query: 456 V 456
V
Sbjct: 438 V 438
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 17/211 (8%)
Query: 259 YNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV-----MIGEYCRE-----NNFE 308
YN +I+ L K + R++ +M + N V ++ +YC F
Sbjct: 162 YNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCERYLTHVQKFA 221
Query: 309 EAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDG 368
+ RI +P++ +N+ L LCK G E L M R PD T+ LF G
Sbjct: 222 KRKRIR---VKTQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFG 277
Query: 369 LCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICN 428
CR R ++A+ +L+EM+ G+ P + A + CQ G + + + + +KG +
Sbjct: 278 WCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVS 337
Query: 429 ---EGIWDVVLSMVCKPEKVPESFELLDALV 456
+ +++ + K +K E FEL+ ++
Sbjct: 338 APTAKTFALMIVALAKNDKAEECFELIGRMI 368
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 145/315 (46%), Gaps = 13/315 (4%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQF--DAVTELAARAGE 144
++ Y+R+ + S+A + ++ C L SFNTL++A L + EL
Sbjct: 231 MMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRN 290
Query: 145 FGA-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLRE 203
G PDA TYN L+ A + D A ++F++M + +PD T+ +I E
Sbjct: 291 SGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAE 350
Query: 204 AFELKEEMFREFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYN 260
A E +F E +L+G Y +L+ + + +M K G D YN
Sbjct: 351 A----ERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYN 406
Query: 261 TLINALFKAGKKEEALRVLEEMRE-GGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV-- 317
T+I+ K G+ + AL++ ++M+ G +++T V+I + N EA ++ +
Sbjct: 407 TIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD 466
Query: 318 EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFRE 377
G+KP + Y+ + K GK EA D F M R G PD + Y + D L R + R+
Sbjct: 467 VGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRK 526
Query: 378 AVVVLDEMMFKGYAP 392
A + +M+ G+ P
Sbjct: 527 AWGLYRDMISDGHTP 541
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 145/345 (42%), Gaps = 16/345 (4%)
Query: 122 LLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGV 181
+L L Q E+ RA YN ++ G +A EL D MR RG
Sbjct: 197 ILGVLGRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGC 256
Query: 182 RPDQATFGTLIHRLCENSRLRE-------AFELKEEMFREFKLEGCVTIYTNLIKGVCKI 234
PD +F TLI N+RL+ A EL + M R L Y L+ +
Sbjct: 257 VPDLISFNTLI-----NARLKSGGLTPNLAVELLD-MVRNSGLRPDAITYNTLLSACSRD 310
Query: 235 GELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTC 294
L A ++ ++M + D YN +I+ + G EA R+ E+ G ++VT
Sbjct: 311 SNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTY 370
Query: 295 NVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPR 352
N ++ + RE N E+ + ++ G D + YN + K+G+ A+ L+ DM
Sbjct: 371 NSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKG 430
Query: 353 -RGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
G PD +TY L D L + + EA ++ EM+ G P + +A + + G E
Sbjct: 431 LSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKRE 490
Query: 412 LLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
S + G + + V+L ++ + + +++ L ++
Sbjct: 491 EAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMI 535
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 165/380 (43%), Gaps = 19/380 (5%)
Query: 50 LIITKLGRAKMLPEM-EQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIP 108
++ KLG PE QV++Q H P+ +I Y + + +A ++
Sbjct: 724 VVYCKLG----FPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLR 779
Query: 109 SFRCQRTLKSFNTLLHALLTCRQFD---AVTELAARAGEFGAPDACTYNILIRASCLRGH 165
LK++N+L+ A C ++ A+ R G +P + NIL+ A C+ G
Sbjct: 780 QSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGP--SPTVESINILLHALCVDGR 837
Query: 166 ADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEG---CVT 222
+ + + +E++ G + +++ ++ +R FE+K +++ K G +
Sbjct: 838 LEELYVVVEELQDMGFKISKSSILLMLDAF---ARAGNIFEVK-KIYSSMKAAGYLPTIR 893
Query: 223 IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEM 282
+Y +I+ +CK + A + EM + K++ A++N+++ ++ ++V + +
Sbjct: 894 LYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRI 953
Query: 283 REGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKW 340
+E G E + T N +I YCR+ EE Y ++ + G+ P + Y + K+
Sbjct: 954 KETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCL 1013
Query: 341 SEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAF 400
+A LF ++ +G D Y T+ +A +L M G P ++
Sbjct: 1014 EQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLL 1073
Query: 401 VSELCQEGNFELLSTVLSDL 420
+ GN + VLS+L
Sbjct: 1074 MVSYSSSGNPQEAEKVLSNL 1093
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 98/193 (50%), Gaps = 3/193 (1%)
Query: 168 RAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNL 227
+ +++ ++ G+ PD+ T+ TLI C + R E + L ++M R L+ + Y +L
Sbjct: 945 KTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQM-RNLGLDPKLDTYKSL 1003
Query: 228 IKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGC 287
I K L A ++ +E++ KGLKLD + Y+T++ +G +A ++L+ M+ G
Sbjct: 1004 ISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGI 1063
Query: 288 EWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VKPDVIGYNVFLGWLCKEGKWSEAMD 345
E T ++++ Y N +EA ++L ++ V+ + Y+ + + ++ ++
Sbjct: 1064 EPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIE 1123
Query: 346 LFHDMPRRGCAPD 358
+M + G PD
Sbjct: 1124 RLLEMKKEGLEPD 1136
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/335 (20%), Positives = 129/335 (38%), Gaps = 45/335 (13%)
Query: 154 NILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFR 213
++L++ C D A + G + T +++ + R EAFEL E +
Sbjct: 582 SVLVKGECF----DLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLE-FLK 636
Query: 214 EFKLEGCVTIYTNLIKGVCKIGELSWAFR--IKDEMVKKGLKLDAALYNTLINALFKAGK 271
E I LI CK+ LS A D V + +Y TL++
Sbjct: 637 EHASGSKRLITEALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEH 696
Query: 272 KEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE------------- 318
EA +V ++R GCE + C M+ YC+ E A+++++ E
Sbjct: 697 YAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYT 756
Query: 319 -------------------------GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR 353
G PD+ +N + + G + A +F+ M R
Sbjct: 757 DIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRD 816
Query: 354 GCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELL 413
G +P V + L LC + E VV++E+ G+ ++ + + GN +
Sbjct: 817 GPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEV 876
Query: 414 STVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPES 448
+ S + + G + ++ +++ ++CK ++V ++
Sbjct: 877 KKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDA 911
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 104/278 (37%), Gaps = 36/278 (12%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD T+N L+ A G +RA +F+ M G P + L+H LC + RL E + +
Sbjct: 785 PDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVV 844
Query: 208 KEEMFR-EFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
EE+ FK+ + ++ + G + +I M G LY +I L
Sbjct: 845 VEELQDMGFKISKSSILL--MLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELL 902
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIG 326
K + +A ++ EM E + N M+ Y ++++ ++
Sbjct: 903 CKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQV------------- 949
Query: 327 YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMM 386
+ + G PD TY TL CR R+ E +++ +M
Sbjct: 950 --------------------YQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 387 FKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
G P + +S ++ E + +L SKG
Sbjct: 990 NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKG 1027
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/270 (20%), Positives = 109/270 (40%), Gaps = 10/270 (3%)
Query: 188 FGTLIHRLCENSRLREAFELKEEMFREFKLEGCV---TIYTNLIKGVCKIGELSWAFRIK 244
+ TL+H N EA ++F + +L GC ++ +++ CK+G A ++
Sbjct: 684 YETLLHCCVANEHYAEA----SQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVV 739
Query: 245 DEMVKKGLKLD-AALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCR 303
++ KG + +Y +I A K ++A V+ +R+ G + T N ++ Y +
Sbjct: 740 NQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQ 799
Query: 304 ENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVT 361
+E A I + + +G P V N+ L LC +G+ E + ++ G +
Sbjct: 800 CGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSS 859
Query: 362 YRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLT 421
+ D R E + M GY P + + LC+ ++S++
Sbjct: 860 ILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEME 919
Query: 422 SKGKICNEGIWDVVLSMVCKPEKVPESFEL 451
IW+ +L M E ++ ++
Sbjct: 920 EANFKVELAIWNSMLKMYTAIEDYKKTVQV 949
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 160/373 (42%), Gaps = 46/373 (12%)
Query: 16 LRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVL-HQLHLD 74
L+S++DP + LF +R + +++ +++L A L +E +L HQ L
Sbjct: 45 LKSERDPEKLYNLF---KANATNRLVIENRFAFEDTVSRLAGAGRLDFIEDLLEHQKTLP 101
Query: 75 TRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDA 134
R E + +I Y +A +A+ TF ++ + C+R++KSFN L L
Sbjct: 102 QGRR--EGFIVRIIMLYGKAGMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHT 159
Query: 135 VTELAARA-GEFGAP-DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLI 192
+ E A ++G DA ++NI I++ C G D A+ EM G+ PD T+ TLI
Sbjct: 160 IWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLI 219
Query: 193 HRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGL 252
L ++ R C IG W MV KG
Sbjct: 220 SALYKHER-------------------------------CVIGNGLWNL-----MVLKGC 243
Query: 253 KLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYR 312
K + +N I L + +A +L M + E +S+T N++I + + A R
Sbjct: 244 KPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAER 303
Query: 313 ILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLC 370
+ + +G KP++ Y + +LCK G + A + D R+ P++ T L GL
Sbjct: 304 VYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLV 363
Query: 371 RWRQFREAVVVLD 383
+ Q +A +++
Sbjct: 364 KKGQLDQAKSIME 376
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 115/290 (39%), Gaps = 33/290 (11%)
Query: 164 GHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTI 223
G +A + F M G + +F + L N L +E + ++ ++
Sbjct: 120 GMTKQALDTFFNMDLYGCKRSVKSFNAALQVLSFNPDLHTIWEFLHDAPSKYGIDIDAVS 179
Query: 224 YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMR 283
+ IK C++G L A+ EM K GL D Y TLI+AL+K E
Sbjct: 180 FNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKH----------ERCV 229
Query: 284 EGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEA 343
G WN + ++G KP++ +NV + +L + +A
Sbjct: 230 IGNGLWNLMV-----------------------LKGCKPNLTTFNVRIQFLVNRRRAWDA 266
Query: 344 MDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSE 403
DL MP+ PD +TY + G R A V M KGY P K +
Sbjct: 267 NDLLLLMPKLQVEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHY 326
Query: 404 LCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLD 453
LC+ GNF+L T+ D K N +++L + K ++ ++ +++
Sbjct: 327 LCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQAKSIME 376
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 114/255 (44%), Gaps = 17/255 (6%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
PD TY I+I C +A+ LF++M+ R V+PD T+ L++ E +
Sbjct: 632 VPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPE-------LD 684
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
+K EM F + V YT +I C + +L + + +M ++ + D Y L+
Sbjct: 685 MKREM-EAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK-- 741
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDV 324
K E L EM+ + + V+I C+ + EA RI D + GV PD
Sbjct: 742 ---NKPERNLS--REMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDA 796
Query: 325 IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDE 384
Y + CK G EA +F M G PDVV Y L G CR +AV ++ E
Sbjct: 797 APYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKE 856
Query: 385 MMFKGYAPLSKNLNA 399
M+ KG P +L+A
Sbjct: 857 MLEKGIKPTKASLSA 871
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 128/311 (41%), Gaps = 38/311 (12%)
Query: 144 EFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLRE 203
EF P + + + + + +A +L D M GV P+++ +G LI C + +R+
Sbjct: 559 EFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRK 618
Query: 204 AFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLI 263
A E E + + K+ + YT +I C++ E A+ + ++M ++ +K D Y+ L+
Sbjct: 619 AREFFEILVTK-KIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLL 677
Query: 264 NALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE----- 318
N+ + L + EM + V +MI YC N+ ++ Y + ++
Sbjct: 678 NS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIV 730
Query: 319 -------------------------GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR 353
VKPDV Y V + W CK G EA +F M
Sbjct: 731 PDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIES 790
Query: 354 GCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELL 413
G PD Y L C+ +EA ++ D M+ G P A ++ C+ G
Sbjct: 791 GVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKA 850
Query: 414 STVLSDLTSKG 424
++ ++ KG
Sbjct: 851 VKLVKEMLEKG 861
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 119/263 (45%), Gaps = 5/263 (1%)
Query: 152 TYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM 211
Y ++R C + A + +M G+ PD + +I +N + +A ++ +M
Sbjct: 293 AYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKM 352
Query: 212 FREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGK 271
++ K CV I +++++ C++G S A+ + E + + LD YN +AL K GK
Sbjct: 353 LKKRKRINCV-IVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 272 KEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRIL---DGVEGVKPDVIGYN 328
EEA+ + EM G + + +IG C + +A+ ++ DG G PD++ YN
Sbjct: 412 VEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGT-GKTPDIVIYN 470
Query: 329 VFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFK 388
V G L G EA + M RG P VT+ + +GL + +A + + K
Sbjct: 471 VLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHK 530
Query: 389 GYAPLSKNLNAFVSELCQEGNFE 411
+ + F + C + FE
Sbjct: 531 SRENDASMVKGFCAAGCLDHAFE 553
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 139/355 (39%), Gaps = 38/355 (10%)
Query: 48 YDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSI 107
Y II + +P+ V +++ L R R+ ++ ++ Y + S A F
Sbjct: 329 YSAIIEGHRKNMNIPKAVDVFNKM-LKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEF 387
Query: 108 PSFRCQRTLKSFNTLLHALLTCRQFDAVTEL-AARAGEFGAPDACTYNILIRASCLRGHA 166
+N AL + + EL G+ APD Y LI CL+G
Sbjct: 388 RETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKC 447
Query: 167 DRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE-------------------L 207
AF+L EM G PD + L L N +EAFE +
Sbjct: 448 SDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMV 507
Query: 208 KEEMFREFKLEGCVTIYTNL-----------IKGVCKIGELSWAFRIKDEMVKKGLKLDA 256
E + +L+ Y +L +KG C G L AF + ++ L
Sbjct: 508 IEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAF---ERFIRLEFPLPK 564
Query: 257 ALYNTLINAL-FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILD 315
++Y TL +L + +A +L+ M + G E +IG +CR NN +A +
Sbjct: 565 SVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFE 624
Query: 316 GV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDG 368
+ + + PD+ Y + + C+ + +A LF DM RR PDVVTY L +
Sbjct: 625 ILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNS 679
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 138/341 (40%), Gaps = 9/341 (2%)
Query: 120 NTLLHALLTCRQFDAVTELAARAG-EFG-APDACTYNILIRASCLRGHADRAFELFDEMR 177
L+ A FD ++ RA G APD N LI G +D F E+
Sbjct: 150 TALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIE 209
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGEL 237
G+ D T+ ++ L N E +L + CV Y N I+G+C
Sbjct: 210 RLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCV-FYLNFIEGLCLNQMT 268
Query: 238 SWAFRIKDEMVKKGLKLDAA----LYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
A+ + + + +D + Y ++ L + E+A V+ +M + G + +
Sbjct: 269 DIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYV 328
Query: 294 CNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
+ +I + + N +A + + + + + + + + L C+ G +SEA DLF +
Sbjct: 329 YSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFR 388
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
+ D V Y FD L + + EA+ + EM KG AP N + C +G
Sbjct: 389 ETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCS 448
Query: 412 LLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
++ ++ GK + I++V+ + E+FE L
Sbjct: 449 DAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETL 489
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD Y +LI C G A +FD+M GV PD A + LI C+ L+EA +
Sbjct: 759 PDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMI 818
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+ M E ++ V YT LI G C+ G + A ++ EM++KG+K A + + A
Sbjct: 819 FDRMI-ESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAVHYAKL 877
Query: 268 KA 269
KA
Sbjct: 878 KA 879
>AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11849789-11851351 REVERSE
LENGTH=442
Length = 442
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 143/315 (45%), Gaps = 33/315 (10%)
Query: 4 PKPISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPE 63
P +P L+ + ++DP + F LF N + F H SY + I KLG AKM E
Sbjct: 134 PPRFTPEELADAITLEEDPFLCFHLF---NWASQQPRFTHENCSYHIAIRKLGAAKMYQE 190
Query: 64 MEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTF---LSIPSFRCQRTLKSFN 120
M+ +++Q+ L RH E L +I ++ +A + RAV F ++ + C+ T+++++
Sbjct: 191 MDDIVNQV-LSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYH 249
Query: 121 TLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRG 180
L ALL G + N + + + LF +M G
Sbjct: 250 ILFKALL------------------GRGNNSYINHV--------YMETVRSLFRQMVDSG 283
Query: 181 VRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWA 240
+ PD L+ + + +A + +M + E Y LI G+C G A
Sbjct: 284 IEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINA 343
Query: 241 FRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGE 300
+ EM KG + YN+L+NA +G+ ++A++ L EM E G + ++ ++ E
Sbjct: 344 RELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDE 403
Query: 301 YCRENNFEEAYRILD 315
CR+ ++EA R+L+
Sbjct: 404 SCRKGKYDEATRLLE 418
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 96/233 (41%), Gaps = 26/233 (11%)
Query: 245 DEMVKKGLKL----DAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGE 300
D++V + L + + LYN++I KAGK A+ + M ++ C I
Sbjct: 192 DDIVNQVLSVRHIGNENLYNSIIFYFTKAGKLIRAVNIFRHM----VTSKNLECRPTIRT 247
Query: 301 Y--------CRENNFEEAYRILDGV---------EGVKPDVIGYNVFLGWLCKEGKWSEA 343
Y R NN + ++ V G++PDV N + ++A
Sbjct: 248 YHILFKALLGRGNNSYINHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDA 307
Query: 344 MDLFHDMPR-RGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVS 402
+ +FH M C P+ TY L GLC + A +L EM KG+ P K+ N+ V+
Sbjct: 308 LRIFHQMSVVYDCEPNSFTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVN 367
Query: 403 ELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
G + L ++ G++ + + ++ C+ K E+ LL+ L
Sbjct: 368 AFALSGEIDDAVKCLWEMIENGRVVDFISYRTLVDESCRKGKYDEATRLLEML 420
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 104/237 (43%), Gaps = 15/237 (6%)
Query: 219 GCVTIYTNLIKGVCKIGELSWAFRIKDEMV-KKGLKLDAAL--YNTLINALFKAGKKE-- 273
G +Y ++I K G+L A I MV K L+ + Y+ L AL G
Sbjct: 205 GNENLYNSIIFYFTKAGKLIRAVNIFRHMVTSKNLECRPTIRTYHILFKALLGRGNNSYI 264
Query: 274 -----EALRVL-EEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGV---KPDV 324
E +R L +M + G E + N ++ Y + +A RI + V +P+
Sbjct: 265 NHVYMETVRSLFRQMVDSGIEPDVFALNCLVKGYVLSLHVNDALRIFHQMSVVYDCEPNS 324
Query: 325 IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDE 384
Y+ + LC +G+ A +L +M +G P+ +Y +L + + +AV L E
Sbjct: 325 FTYDYLIHGLCAQGRTINARELLSEMKGKGFVPNGKSYNSLVNAFALSGEIDDAVKCLWE 384
Query: 385 MMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCK 441
M+ G + V E C++G ++ + +L L K ++ + +D +++++ K
Sbjct: 385 MIENGRVVDFISYRTLVDESCRKGKYDEATRLLEMLREK-QLVDRDSYDKLVNVLHK 440
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 122/262 (46%), Gaps = 7/262 (2%)
Query: 149 DACTYNILIRASCLR--GHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
D YN A CL GH A +L + M S+G P + F LI +N R +
Sbjct: 157 DFAAYNAF--AYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYY 214
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
+ E+M ++F + V +Y ++ + K G A + ++ + GL ++ + L+ L
Sbjct: 215 VYEKM-KKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGL 273
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDV 324
KAG+ EE L +L+ MRE C+ + MI E N + + R+ D + + +KPDV
Sbjct: 274 CKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDV 333
Query: 325 IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDE 384
+ Y + LCK+G+ +LF +M + D YR L +G + R A + ++
Sbjct: 334 MAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWED 393
Query: 385 MMFKGYAPLSKNLNAFVSELCQ 406
++ GY NA + LC
Sbjct: 394 LVDSGYIADIGIYNAVIKGLCS 415
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 96/451 (21%), Positives = 185/451 (41%), Gaps = 64/451 (14%)
Query: 7 ISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGR------AKM 60
++P ++ +L+ D +VA + F Q + ++H +Y+ L R A
Sbjct: 123 VTPSIVAEVLKLGNDAAVAAKFFHWAGKQ---KGYKHDFAAYNAFAYCLNRNGHFRAADQ 179
Query: 61 LPEMEQVLHQLHLDTRHRVP-EPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSF 119
LPE+ +D++ R P E +I +A R+ R + + F + + +
Sbjct: 180 LPEL--------MDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLY 231
Query: 120 NTLLHALLTCRQFDAVTELAARAGEFG--------------------------------- 146
N ++ AL+ FD + E G
Sbjct: 232 NRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRE 291
Query: 147 ---APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLRE 203
PD Y +I+ G+ D + ++DEMR ++PD +GTL+ LC++ R+
Sbjct: 292 NLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVER 351
Query: 204 AFELKEEMFREFKLEGCVT---IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYN 260
+EL F E K + + IY LI+G G++ A + +++V G D +YN
Sbjct: 352 GYEL----FMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYN 407
Query: 261 TLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGV 320
+I L + ++A ++ + E E + T + ++ Y N + +L+ + +
Sbjct: 408 AVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGEL 467
Query: 321 KPDVIGY-NVFLGWLC-KEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREA 378
V Y F LC E K + A+D+F+ + +G V Y L + L + +++
Sbjct: 468 GYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHG-SVSVYNILMEALYKMGDIQKS 526
Query: 379 VVVLDEMMFKGYAPLSKNLNAFVSELCQEGN 409
+ + EM G+ P S + + + ++G+
Sbjct: 527 LSLFYEMRKLGFEPDSSSYSIAICCFVEKGD 557
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 9/159 (5%)
Query: 146 GAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
G YNIL+ A G ++ LF EMR G PD +++ I E ++ A
Sbjct: 503 GHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAAC 562
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDE---MVKKG-LKLDAALYNT 261
E++ E + Y +L KG+C+IGE+ + E V+ G ++ AL
Sbjct: 563 SFHEKII-EMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYAL--- 618
Query: 262 LINALFKAGKKEEALRVLEEMREGGCEWNSVT-CNVMIG 299
+ + K E+ ++V++EM + G N V C ++ G
Sbjct: 619 TVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIYCAIISG 657
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 81/206 (39%), Gaps = 2/206 (0%)
Query: 249 KKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFE 308
+KG K D A YN L + G A ++ E M G + ++I +
Sbjct: 151 QKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGL 210
Query: 309 EAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLF 366
Y + + ++ G KP V YN + L K G + A+ ++ D G + T+ L
Sbjct: 211 RVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILV 270
Query: 367 DGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKI 426
GLC+ + E + +L M P A + L EGN + V ++
Sbjct: 271 KGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIK 330
Query: 427 CNEGIWDVVLSMVCKPEKVPESFELL 452
+ + ++ +CK +V +EL
Sbjct: 331 PDVMAYGTLVVGLCKDGRVERGYELF 356
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 158/404 (39%), Gaps = 58/404 (14%)
Query: 9 PFRLSSLLRSQKDP--SVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQ 66
P LL+SQ + S+ F +L N P ++L L+ K +A
Sbjct: 80 PLFFGELLKSQNNVLFSLWFFRWLCSNYDYTPGPVSLNILFGALLDGKAVKAA------- 132
Query: 67 VLHQLHLDTRHRVPEP-LLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHA 125
+ LDT PEP LL + + A++ + + ++ + N++L
Sbjct: 133 ---KSFLDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLG 189
Query: 126 LLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQ 185
L R+ D EL E D+ LIRA C G +EL + +G+ P Q
Sbjct: 190 CLKARKLDRFWELHKEMVE-SEFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQ 248
Query: 186 ATFGTLIHRLCE-----------------------------------NSRLREAFELKEE 210
+ LI CE N + EA+ +
Sbjct: 249 YVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCI--- 305
Query: 211 MFREFKLEGCV---TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
F+ K +G +YT +I+G C+ G L A ++ EM+KKG++ + YN +I+ F
Sbjct: 306 -FKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHF 364
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVI 325
K G+ EM G ++CN MI +C +EA+ I + GV P+ I
Sbjct: 365 KRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAI 424
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGL 369
YN + CKE K + + L+ ++ G P + Y L L
Sbjct: 425 TYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALVRNL 468
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 137/340 (40%), Gaps = 16/340 (4%)
Query: 79 VPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTEL 138
P P+ +++ + +A ++FL F+ + TL L + C + + E
Sbjct: 110 TPGPVSLNILFGALLDGKAVKAAKSFLDTTGFKPEPTL------LEQYVKCLSEEGLVEE 163
Query: 139 AARA----GEFGAPDACTYNILIRASCLRGHA-DRAFELFDEMRSRGVRPDQATFGTLIH 193
A + G + + CL+ DR +EL EM D LI
Sbjct: 164 AIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF--DSERIRCLIR 221
Query: 194 RLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLK 253
LC+ + E +EL ++ ++ L+ +Y LI G C+IG + + M+
Sbjct: 222 ALCDGGDVSEGYELLKQGLKQ-GLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHF 280
Query: 254 LDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRI 313
+Y +I L K+ EA + + +++ G + V MI +C + A ++
Sbjct: 281 PSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKL 340
Query: 314 LDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCR 371
+ +G++P+ YNV + K G+ S +++M R G +++ T+ G C
Sbjct: 341 WFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCS 400
Query: 372 WRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
+ EA + M G P + NA + C+E E
Sbjct: 401 HGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVE 440
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 133/345 (38%), Gaps = 17/345 (4%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMR 177
S N L ALL + A G P+ ++ G + A E+++ ++
Sbjct: 115 SLNILFGALLDGKAVKAAKSFLDTTG--FKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLK 172
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFR-EFKLEGCVTIYTNLIKGVCKIGE 236
G+ T +++ + +L +EL +EM EF E LI+ +C G+
Sbjct: 173 DMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFDSERIRC----LIRALCDGGD 228
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTC-- 294
+S + + + +K+GL +Y LI+ + G VL M WN
Sbjct: 229 VSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTM----IAWNHFPSMY 284
Query: 295 --NVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM 350
+I C EAY I ++ G PD + Y + C++G A L+ +M
Sbjct: 285 IYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEM 344
Query: 351 PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNF 410
++G P+ Y + G + + +EM+ GY + N + C G
Sbjct: 345 IKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKS 404
Query: 411 ELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
+ + +++ G N ++ ++ CK KV + +L L
Sbjct: 405 DEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKEL 449
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 129/279 (46%), Gaps = 19/279 (6%)
Query: 132 FDAVTELAARAGE----FGA----------PDACTYNILIRASCLRGHADRAFELFDEMR 177
F A+ + ARAG+ FGA PD +N LI A G DRAF++ EM+
Sbjct: 540 FGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMK 599
Query: 178 SRG--VRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIG 235
+ + PD + G L+ C ++ A E+ + M ++ + G +YT + K G
Sbjct: 600 AETHPIDPDHISIGALMKACCNAGQVERAKEVYQ-MIHKYGIRGTPEVYTIAVNSCSKSG 658
Query: 236 ELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCN 295
+ +A I +M +K + D ++ LI+ A +EA +L++ + G +++ +
Sbjct: 659 DWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYS 718
Query: 296 VMIGEYCRENNFEEAYRILDGVEGVK--PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR 353
++G C ++++A + + ++ +K P + N + LC+ + +AM+ ++
Sbjct: 719 SLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTL 778
Query: 354 GCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
G P+ +TY L R F + +L + G +P
Sbjct: 779 GLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSP 817
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 136/312 (43%), Gaps = 4/312 (1%)
Query: 117 KSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDE 175
K + TL+ + + DA+ E+ + G + T+ LI G +AF +
Sbjct: 503 KLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGI 562
Query: 176 MRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFRE-FKLEGCVTIYTNLIKGVCKI 234
+RS+ V+PD+ F LI ++ + AF++ EM E ++ L+K C
Sbjct: 563 LRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNA 622
Query: 235 GELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTC 294
G++ A + + K G++ +Y +N+ K+G + A + ++M+E + V
Sbjct: 623 GQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFF 682
Query: 295 NVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPR 352
+ +I +EA+ IL +G++ I Y+ +G C W +A++L+ +
Sbjct: 683 SALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKS 742
Query: 353 RGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFEL 412
P + T L LC Q +A+ LDE+ G P + + + ++ +FE+
Sbjct: 743 IKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEV 802
Query: 413 LSTVLSDLTSKG 424
+LS G
Sbjct: 803 SFKLLSQAKGDG 814
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 122/307 (39%), Gaps = 18/307 (5%)
Query: 153 YNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSR-LREAFELKEEM 211
YN L+R G L +++ R + + + C+ R ++EAF
Sbjct: 407 YNRLLR----DGRIKDCISLLEDLDQRDLLDMDKIYHASFFKACKKQRAVKEAFR----- 457
Query: 212 FREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKK-GLKLDAALYNTLINALFKAG 270
F + L ++ + N++ VC + R +V++ G+ D LY TLI++ K+G
Sbjct: 458 FTKLILNPTMSTF-NMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSG 516
Query: 271 KKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEE---AYRILDGVEGVKPDVIGY 327
K + V +M G E N T +I R + AY IL + VKPD + +
Sbjct: 517 KVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRS-KNVKPDRVVF 575
Query: 328 NVFLGWLCKEGKWSEAMDLFHDMPRRG--CAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
N + + G A D+ +M PD ++ L C Q A V +
Sbjct: 576 NALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMI 635
Query: 386 MFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKV 445
G + V+ + G+++ ++ D+ K +E + ++ + + +
Sbjct: 636 HKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKML 695
Query: 446 PESFELL 452
E+F +L
Sbjct: 696 DEAFGIL 702
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 124/279 (44%), Gaps = 14/279 (5%)
Query: 37 NHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPL-LCHVITFYARAR 95
N +P R + ++ +I+ G++ + VL ++ +T P+ + + ++ A
Sbjct: 567 NVKPDR---VVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAG 623
Query: 96 QPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYN 154
Q RA + + I + + T + + +++ +D + E PD ++
Sbjct: 624 QVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFS 683
Query: 155 ILIRASCLRGHA---DRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM 211
LI + GHA D AF + + +S+G+R ++ +L+ C ++A EL E++
Sbjct: 684 ALIDVA---GHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKI 740
Query: 212 FREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGK 271
+ KL ++ LI +C+ +L A DE+ GLK + Y+ L+ A +
Sbjct: 741 -KSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDD 799
Query: 272 KEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA 310
E + ++L + + G N + C I C+ FE+A
Sbjct: 800 FEVSFKLLSQAKGDGVSPNLIMCRC-ITSLCKR-RFEKA 836
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 115/243 (47%), Gaps = 4/243 (1%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
D YN++I+A ++A LF M+++G PD+ T+ +L L + EA +
Sbjct: 514 DVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRIL 573
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
EM GC T Y +I ++G LS A + + M K G+K + +Y +LIN +
Sbjct: 574 AEMLDSGCKPGCKT-YAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAE 632
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVK--PDVIG 326
+G EEA++ M E G + N + +I Y + EEA R+ D ++ + PDV
Sbjct: 633 SGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAA 692
Query: 327 YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMM 386
N L G SEA +F+ + +G DV+++ T+ EA+ V +EM
Sbjct: 693 SNSMLSLCADLGIVSEAESIFNALREKGTC-DVISFATMMYLYKGMGMLDEAIEVAEEMR 751
Query: 387 FKG 389
G
Sbjct: 752 ESG 754
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 147/367 (40%), Gaps = 8/367 (2%)
Query: 90 FYARARQPSRAVQTFLS--IPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA 147
F AR P F S S R R +FNTL+ + + L + + G
Sbjct: 277 FKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGV 336
Query: 148 P-DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
P D T+N +I GH A L +M +G+ PD T+ L+ + + A E
Sbjct: 337 PIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALE 396
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
++ R+ L + ++ +C+ ++ + EM + +++D ++
Sbjct: 397 YYRKI-RKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMY 455
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDG---VEGVKPD 323
G +A + L E + C +S T +I Y + + EA + G + G + D
Sbjct: 456 VNEGLVVQA-KALFERFQLDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRND 514
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
V+ YNV + K +A+ LF M +G PD TY +LF L EA +L
Sbjct: 515 VLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILA 574
Query: 384 EMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPE 443
EM+ G P K A ++ + G + + G NE ++ +++ +
Sbjct: 575 EMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESG 634
Query: 444 KVPESFE 450
V E+ +
Sbjct: 635 MVEEAIQ 641
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 113/295 (38%), Gaps = 58/295 (19%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P+ YNI++RA G D + EM GV P T+G L+ + ++EA
Sbjct: 143 PNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLW 202
Query: 208 KEEMFR------EFKLEGCVTIYTN---------LIKGVCKIGELSWAFRIKDEMVKKG- 251
+ M + E + V ++ N KG C G++ D+ K G
Sbjct: 203 IKHMGQRMHFPDEVTMATVVRVFKNSGEFDRADRFFKGWCA-GKVDLDLDSIDDFPKNGS 261
Query: 252 ---------------LKLDA------------------------ALYNTLINALFKAGKK 272
K+ A + +NTLI+ KAG+
Sbjct: 262 AQSPVNLKQFLSMELFKVGARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRL 321
Query: 273 EEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVF 330
+A + EM + G ++VT N MI + EA +L +E G+ PD YN+
Sbjct: 322 NDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNIL 381
Query: 331 LGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
L G A++ + + + G PD VT+R + LC+ + E V+ EM
Sbjct: 382 LSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEM 436
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 88/221 (39%), Gaps = 11/221 (4%)
Query: 146 GAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
G PD N ++ G A +F+ +R +G D +F T+++ L EA
Sbjct: 686 GGPDVAASNSMLSLCADLGIVSEAESIFNALREKGT-CDVISFATMMYLYKGMGMLDEAI 744
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEM-VKKGLKLDAALYNTLIN 264
E+ EEM RE L T + ++ G+LS + EM V++ L LD + TL
Sbjct: 745 EVAEEM-RESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFT 803
Query: 265 ALFKAGKKEEALRVLE----EMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGV 320
L K G EA+ L+ E + + T +G Y E + G +
Sbjct: 804 LLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYA--LESCQELTSG--EI 859
Query: 321 KPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVT 361
+ YN + G A+ + M +G PD+VT
Sbjct: 860 PREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVT 900
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/425 (21%), Positives = 176/425 (41%), Gaps = 72/425 (16%)
Query: 35 QTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARA 94
+T HRP SL+SY ++ + K + ++ ++ + ++ VI ++ +
Sbjct: 73 ETGHRP---SLISYTTLLAAMTVQKQYGSISSIVSEVE-QSGTKLDSIFFNAVINAFSES 128
Query: 95 RQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG----APDA 150
AVQ L + T ++NTL+ + + +EL E G P+
Sbjct: 129 GNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNI 188
Query: 151 CTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATF---------------------- 188
T+N+L++A C + + A+E+ +M GVRPD T+
Sbjct: 189 RTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVE 248
Query: 189 ---------------GTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCK 233
G ++ C R+R+ M +E ++E + ++ +LI G +
Sbjct: 249 KMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRM-KEMRVEANLVVFNSLINGFVE 307
Query: 234 IGE-----------LSWAFRIKDEMVKK--------------GLKLDAALYNTLINALFK 268
+ + L +F + E+V +K D Y+T++NA
Sbjct: 308 VMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWSS 367
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDG-VEGVKPDVIGY 327
AG E+A +V +EM + G + ++ +++ Y R ++A +L+ + +P+V+ +
Sbjct: 368 AGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIF 427
Query: 328 NVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMF 387
+ C G +AM +F+ M + G +P++ T+ TL G +Q +A VL M
Sbjct: 428 TTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRG 487
Query: 388 KGYAP 392
G P
Sbjct: 488 CGVKP 492
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 104/230 (45%), Gaps = 18/230 (7%)
Query: 191 LIHRLCENSRLREAFELKEEMFREFKLEG---CVTIYTNLIKGVCKIGELSWAFRIKDEM 247
L++ L E R EA + +F+ G + YT L+ + + I E+
Sbjct: 51 LMNVLIERGRPHEA----QTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEV 106
Query: 248 VKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNF 307
+ G KLD+ +N +INA ++G E+A++ L +M+E G + T N +I Y
Sbjct: 107 EQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKP 166
Query: 308 EEAYRILD-----GVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTY 362
E + +LD G V P++ +NV + CK+ K EA ++ M G PD VTY
Sbjct: 167 ERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTY 226
Query: 363 RTLFDGLC---RWRQFREAVVVLDEMMFKGYA-PLSKNLNAFVSELCQEG 408
T+ C + R V+++M+ K A P + V C+EG
Sbjct: 227 NTI--ATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREG 274
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 139/324 (42%), Gaps = 24/324 (7%)
Query: 79 VPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQ-----RTLKSFNTLLHALLTCRQFD 133
P P +IT R P + F CQ + + + + L ++F+
Sbjct: 33 TPSPPKPSLITLVNDERDPKFITEKFKKA----CQAEWFRKNIAVYERTVRRLAAAKKFE 88
Query: 134 AVTELAARAGEFGAPDACTYNILIRASCLRGHA---DRAFELFDEMRSRGVRPDQATFGT 190
V E+ ++ P+ + R L G + A ++FDEM R + +F
Sbjct: 89 WVEEILEEQNKY--PNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNA 146
Query: 191 LIHRLCENSRLREAFELKEEMFREF----KLEGCVTIYTNLIKGVCKIGELSWAFRIKDE 246
L++ C NS+ F+L E +F+E +E V Y LIKG+C G + A + DE
Sbjct: 147 LLN-ACVNSK---KFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDE 202
Query: 247 MVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENN 306
+ KGLK D +N L++ + GK EE ++ M E + + + N + EN
Sbjct: 203 IENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENK 262
Query: 307 FEEAYRILDGVEG--VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRT 364
EE + D ++G +KPDV + + EGK EA+ + ++ + GC P + +
Sbjct: 263 SEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNS 322
Query: 365 LFDGLCRWRQFREAVVVLDEMMFK 388
L +C+ A + E+ K
Sbjct: 323 LLPAICKAGDLESAYELCKEIFAK 346
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 141/358 (39%), Gaps = 92/358 (25%)
Query: 2 ATPKPISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKML 61
ATP P P L +L+ ++DP + F FR ++ Y+ + +L AK
Sbjct: 32 ATPSPPKP-SLITLVNDERDPKFITEKF---KKACQAEWFRKNIAVYERTVRRLAAAKKF 87
Query: 62 PEMEQVLHQLHLDTRHRVP----EPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLK 117
+E++L + +++ P E + +I Y R A + F +P C+RT
Sbjct: 88 EWVEEILEE-----QNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTAL 142
Query: 118 SFNTLLHALLTCRQFDAV---------------------------------TELAARAGE 144
SFN LL+A + ++FD V TE A E
Sbjct: 143 SFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDE 202
Query: 145 FG----APDACTYNILIRASCLRGH----------------------------------- 165
PD T+NIL+ S +G
Sbjct: 203 IENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENK 262
Query: 166 ADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVT--- 222
++ LFD+++ ++PD TF +I +L EA ++E + GC
Sbjct: 263 SEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAIT----WYKEIEKNGCRPLKF 318
Query: 223 IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLE 280
++ +L+ +CK G+L A+ + E+ K L +D A+ +++AL K K++EA ++E
Sbjct: 319 VFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVE 376
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 86/203 (42%), Gaps = 3/203 (1%)
Query: 221 VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLE 280
+ +Y ++ + + W I +E K +IN + G E A +V +
Sbjct: 71 IAVYERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFD 130
Query: 281 EMREGGCEWNSVTCNVMIGEYCRENNF---EEAYRILDGVEGVKPDVIGYNVFLGWLCKE 337
EM E C+ +++ N ++ F E ++ L G ++PDV YN + LC +
Sbjct: 131 EMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGK 190
Query: 338 GKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNL 397
G ++EA+ L ++ +G PD +T+ L +F E + M+ K ++
Sbjct: 191 GSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSY 250
Query: 398 NAFVSELCQEGNFELLSTVLSDL 420
NA + L E E + ++ L
Sbjct: 251 NARLLGLAMENKSEEMVSLFDKL 273
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 150/369 (40%), Gaps = 43/369 (11%)
Query: 14 SLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHL 73
SLL+S+ +P ++ + + ++ R + + + + L R K + Q+L
Sbjct: 47 SLLKSENNPDRILEICRSTSLSPDYHVDR---IIFSVAVVTLAREKHFVAVSQLLDGFIQ 103
Query: 74 DTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFD 133
+ E I Y RA R++QTF ++ + RT+KS N LL A L + +
Sbjct: 104 NQPDPKSESFAVRAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYK 163
Query: 134 AVTELAARAGEFGA--PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTL 191
+ + PD TYN +IR C G ++ + EM + ++P A+FG +
Sbjct: 164 EANRVYLEMPKMYGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLM 223
Query: 192 IHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKG 251
I KEE F E+ R+ DE G
Sbjct: 224 IDGF-----------YKEEKF----------------------DEVRKVMRMMDEF---G 247
Query: 252 LKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAY 311
+ + A YN +I L K K EA +++ + NSVT +++I +C E N +EA
Sbjct: 248 VHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDEAM 307
Query: 312 RILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGL 369
+ + + G KPD Y + LCK G + A+ L + + P + L +GL
Sbjct: 308 NLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVNGL 367
Query: 370 CRWRQFREA 378
+ EA
Sbjct: 368 ASRSKVDEA 376
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 146/331 (44%), Gaps = 12/331 (3%)
Query: 108 PSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHA- 166
P + R + F+ + L + F AV++L + PD + + +RA L G A
Sbjct: 69 PDYHVDRII--FSVAVVTLAREKHFVAVSQLLDGFIQ-NQPDPKSESFAVRAIILYGRAN 125
Query: 167 --DRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIY 224
DR+ + F + + + L+ +EA + EM + + +E + Y
Sbjct: 126 MLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLETY 185
Query: 225 TNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMRE 284
+I+ +C+ G S ++ I EM +K +K AA + +I+ +K K +E +V+ M E
Sbjct: 186 NRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMMDE 245
Query: 285 GGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VKPDVIGYNVFLGWLCKEGKWSE 342
G T N+MI C+ EA ++DGV ++P+ + Y++ + C E E
Sbjct: 246 FGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENLDE 305
Query: 343 AMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVS 402
AM+LF M G PD Y TL LC+ F A+++ E M K + P + V+
Sbjct: 306 AMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWLVN 365
Query: 403 ELCQEGNF----ELLSTVLSDLTSKGKICNE 429
L EL++ V T + NE
Sbjct: 366 GLASRSKVDEAKELIAVVKEKFTRNVDLWNE 396
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 133/280 (47%), Gaps = 4/280 (1%)
Query: 115 TLKSFNTLLHALLTCRQFDAVTELAARAGEFGAP-DACTYNILIRASCLRGHADRAFELF 173
+ ++N ++ L + + +A E G D TYN L+ +G +AFE++
Sbjct: 242 SFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIY 301
Query: 174 DEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCK 233
+ M D +T+ +I L ++ RL AF+L ++M +E KL +++++L+ + K
Sbjct: 302 ESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQM-KERKLRPSFSVFSSLVDSMGK 360
Query: 234 IGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
G L + ++ EM G + A ++ +LI++ KAGK + ALR+ +EM++ G N
Sbjct: 361 AGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGL 420
Query: 294 CNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
++I + + E A + +E G P Y+ L G+ AM +++ M
Sbjct: 421 YTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMT 480
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYA 391
G P + +Y +L L R A +L EM GY+
Sbjct: 481 NAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYS 520
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 138/291 (47%), Gaps = 4/291 (1%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
DA YNI+IR+ C+ G D A E + EM +G+ T+ L+ + ++ ++ +
Sbjct: 258 DATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIA 317
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
++M R ++ + L+K C G++ A + E+ K + LDA + L+ L +
Sbjct: 318 DDMVRICEISEH-DAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCR 376
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIG 326
A + +AL +++ M+ + +S ++I Y R+N+ +A + ++ G P V
Sbjct: 377 ANRMVDALEIVDIMKRRKLD-DSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVST 435
Query: 327 YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMM 386
Y + L K ++ + +LF++M G PD V + G + EA V M
Sbjct: 436 YTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSME 495
Query: 387 FKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLS 437
KG P K+ + FV ELC+ ++ + + + + + + + I+ V+S
Sbjct: 496 EKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVIS 546
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 126/303 (41%), Gaps = 37/303 (12%)
Query: 152 TYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENS------------ 199
T+ I+I G + A F EM+ G+ P +TF LI LCE
Sbjct: 715 TWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFR 774
Query: 200 -RLREAFELKEEMFREF---------------------KLEGCVTI-YTNLIKGVCKIGE 236
+R F E+ +++ K+ VT+ Y+ I+ +C+IG+
Sbjct: 775 EMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALCRIGK 834
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
L A + LD Y ++++ L + G ++AL + M+E G +
Sbjct: 835 LEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTS 894
Query: 297 MIGEYCRENNFEEAYRILDGVEG--VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
+I + +E E+ +EG +P V+ Y + GK EA + F +M RG
Sbjct: 895 LIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERG 954
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLS 414
+PD TY + LC+ + +A+ +L EM+ KG AP + N L +EG +L
Sbjct: 955 TSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLAR 1014
Query: 415 TVL 417
L
Sbjct: 1015 IAL 1017
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 94/231 (40%), Gaps = 38/231 (16%)
Query: 143 GEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLR 202
G+ G P Y+I IRA C G + A DQ T+G+++H L + L+
Sbjct: 812 GKIGFPVTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQ 871
Query: 203 EAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTL 262
+A + N +K + G K +Y +L
Sbjct: 872 KALD-----------------KVNSMKEI-------------------GTKPGVHVYTSL 895
Query: 263 INALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GV 320
I FK + E+ L ++M CE + VT MI Y EEA+ +E G
Sbjct: 896 IVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGT 955
Query: 321 KPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCR 371
PD Y+ F+ LC+ K +A+ L +M +G AP + +RT+F GL R
Sbjct: 956 SPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNR 1006
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/339 (20%), Positives = 134/339 (39%), Gaps = 37/339 (10%)
Query: 153 YNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMF 212
YN ++ + + D EL EM G D T+ LI + ++ + + E+M
Sbjct: 192 YNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKM- 250
Query: 213 REFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK---- 268
R+ E T Y +I+ +C G A EM++KG+ Y L++ + K
Sbjct: 251 RKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKV 310
Query: 269 -------------------------------AGKKEEALRVLEEMREGGCEWNSVTCNVM 297
+GK +EAL ++ E++ ++ ++
Sbjct: 311 DVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEIL 370
Query: 298 IGEYCRENNFEEAYRILDGVEGVKPDVIG-YNVFLGWLCKEGKWSEAMDLFHDMPRRGCA 356
+ CR N +A I+D ++ K D Y + + ++ S+A++ F + + G
Sbjct: 371 VKGLCRANRMVDALEIVDIMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRP 430
Query: 357 PDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTV 416
P V TY + L + +QF + + +EM+ G P S + A V+ + V
Sbjct: 431 PRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKV 490
Query: 417 LSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
S + KG + + + +C+ + E ++ + +
Sbjct: 491 FSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQM 529
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 76/154 (49%), Gaps = 1/154 (0%)
Query: 133 DAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLI 192
+A++ELA+ GE D TY ++ RG +A + + M+ G +P + +LI
Sbjct: 837 EALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLI 896
Query: 193 HRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGL 252
+ +L + E ++M E E V YT +I G +G++ A+ M ++G
Sbjct: 897 VYFFKEKQLEKVLETCQKMEGE-SCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGT 955
Query: 253 KLDAALYNTLINALFKAGKKEEALRVLEEMREGG 286
D Y+ IN L +A K E+AL++L EM + G
Sbjct: 956 SPDFKTYSKFINCLCQACKSEDALKLLSEMLDKG 989
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/346 (18%), Positives = 142/346 (41%), Gaps = 20/346 (5%)
Query: 119 FNTLLHALLT-CRQFDAVTEL----AARAGEFGAPDACTYNILIRASCLRGHADRAFELF 173
FN + L T + D T L + + G +CT + R +A F
Sbjct: 56 FNEITEILGTDVVKLDETTRLRSHVSGAVSDNGVSVSCTEGV-------RQNAAMGFSGE 108
Query: 174 DEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCK 233
DE +++ V ++ F ++H + R + E+ + I N++K K
Sbjct: 109 DE-KAQKVLHEEVDFSPVVHEITSVVRGDDVLVSMEDRLEKLSFRFEPEIVENVLKRCFK 167
Query: 234 IGELSWAF--RIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNS 291
+ L+ F +K K G +YNT+++ +A + ++ EM + GC+ +
Sbjct: 168 VPHLAMRFFNWVKQ---KDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDI 224
Query: 292 VTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHD 349
T ++I Y + + + + + G + D YN+ + LC G+ A++ + +
Sbjct: 225 RTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKE 284
Query: 350 MPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGN 409
M +G + TY+ L D + + + + D+M+ + C G
Sbjct: 285 MMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGK 344
Query: 410 FELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
+ ++ +L +K + +++++ +C+ ++ ++ E++D +
Sbjct: 345 IKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIM 390
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 144/305 (47%), Gaps = 4/305 (1%)
Query: 154 NILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFR 213
NI + + C + +RA L + GV PD T+ TLI + EA+ + M R
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRM-R 75
Query: 214 EFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKE 273
E +E VT Y +LI G K L+ ++ DEM+ GL D YNTL++ FK G+
Sbjct: 76 EAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHG 135
Query: 274 EALRVL-EEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG-VKPDVIGYNVFL 331
EA ++L E++ G T N+++ C+ + + A + ++ VKP+++ YN+ +
Sbjct: 136 EAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILI 195
Query: 332 GWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYA 391
LCK + + ++ + G P+ VTY T+ + ++ + + + +M +GY
Sbjct: 196 NGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYT 255
Query: 392 PLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGI-WDVVLSMVCKPEKVPESFE 450
A VS L + G E + +L G + + ++ +L++ K + +
Sbjct: 256 FDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDD 315
Query: 451 LLDAL 455
LL+ +
Sbjct: 316 LLEEI 320
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 128/296 (43%), Gaps = 5/296 (1%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEM 176
++NTL+ D + R E G PD TYN LI + +R +LFDEM
Sbjct: 50 TYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEM 109
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
G+ PD ++ TL+ + R EAF++ E L + Y L+ +CK G
Sbjct: 110 LHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGH 169
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
A + + K +K + YN LIN L K+ + ++ E+++ G N+VT
Sbjct: 170 TDNAIELFKHL-KSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTT 228
Query: 297 MIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
M+ Y + E+ ++ + EG D + L K G+ EA + H++ R G
Sbjct: 229 MLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSG 288
Query: 355 C-APDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGN 409
+ D+V+Y TL + + +L+E+ KG P V+ L GN
Sbjct: 289 TRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGN 344
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 112/260 (43%), Gaps = 10/260 (3%)
Query: 116 LKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDE 175
+ ++N LL AL D EL P+ TYNILI C + E
Sbjct: 154 IDTYNILLDALCKSGHTDNAIELFKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRE 213
Query: 176 MRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFRE-FKLEGCVTIYTNLIKGVCKI 234
++ G P+ T+ T++ + R+ + +L +M +E + +G ++ + K
Sbjct: 214 LKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFAN--CAVVSALIKT 271
Query: 235 GELSWAFRIKDEMVKKGLK-LDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
G A+ E+V+ G + D YNTL+N FK G + +LEE+ G + + T
Sbjct: 272 GRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYT 331
Query: 294 CNVMIGEYCRENNFEEAYRILD--GVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
+++ N A + L G G++P V+ N + LCK G AM LF M
Sbjct: 332 HTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASME 391
Query: 352 RRGCAPDVVTYRTLFDGLCR 371
R D TY ++ LC+
Sbjct: 392 VR----DEFTYTSVVHNLCK 407
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 147/353 (41%), Gaps = 26/353 (7%)
Query: 38 HRPFRHSLLSYDLIIT---KLGRAKMLPEMEQVLHQ-LHL-------DTRHRVPEPLLCH 86
H + SY+ +++ KLGR E ++LH+ +HL DT + + + L
Sbjct: 111 HSGLSPDMWSYNTLMSCYFKLGRH---GEAFKILHEDIHLAGLVPGIDTYNILLDAL--- 164
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
++ A++ F + S R + L ++N L++ L R+ +V + + G
Sbjct: 165 -----CKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSG 218
Query: 147 -APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
P+A TY +++ ++ +LF +M+ G D ++ L + R EA+
Sbjct: 219 YTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAY 278
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
E E+ R + Y L+ K G L + +E+ KGLK D + ++N
Sbjct: 279 ECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNG 338
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVI 325
L G A + L + E G + + VTCN +I C+ + + A R+ +E D
Sbjct: 339 LLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASME--VRDEF 396
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREA 378
Y + LCK+G+ A L +G R + G+ ++ A
Sbjct: 397 TYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVLSGIRETVSYQAA 449
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 87/195 (44%), Gaps = 4/195 (2%)
Query: 254 LDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRI 313
+ L N +N+L K E A +L + G + +T N +I Y R +EAY +
Sbjct: 11 ISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAV 70
Query: 314 LDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCR 371
+ G++PDV YN + K + + LF +M G +PD+ +Y TL +
Sbjct: 71 TRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFK 130
Query: 372 WRQFREAVVVLDE-MMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEG 430
+ EA +L E + G P N + LC+ G+ + + L S+ K
Sbjct: 131 LGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSRVK-PELM 189
Query: 431 IWDVVLSMVCKPEKV 445
++++++ +CK +V
Sbjct: 190 TYNILINGLCKSRRV 204
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 101/207 (48%), Gaps = 3/207 (1%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P+ TYN +I + C G A +L M + + PD TF LI+ + ++ EA E+
Sbjct: 43 PNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEI 102
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+EM R +T Y ++I G CK + A R+ D M KG D ++TLIN
Sbjct: 103 YKEMLRWSIFPTTIT-YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYC 161
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVI 325
KA + + + + EM G N+VT +I +C+ + + A +L+ + GV PD I
Sbjct: 162 KAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYI 221
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPR 352
++ L LC + + +A + D+ +
Sbjct: 222 TFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 116/237 (48%), Gaps = 2/237 (0%)
Query: 221 VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLE 280
V I T ++ +CK G A + EM +KG+ + YN +I++ +G+ +A ++L
Sbjct: 10 VVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLR 69
Query: 281 EMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEG 338
M E + VT + +I + +E EA I + + P I YN + CK+
Sbjct: 70 HMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQD 129
Query: 339 KWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLN 398
+ +A + M +GC+PDVVT+ TL +G C+ ++ + + EM +G +
Sbjct: 130 RVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYT 189
Query: 399 AFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
+ CQ G+ + +L+++ S G + + +L+ +C +++ ++F +L+ L
Sbjct: 190 TLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 101/212 (47%), Gaps = 2/212 (0%)
Query: 247 MVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENN 306
M + +K D + +++ L K G A + EM E G N +T N MI +C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 307 FEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRT 364
+ +A ++L + + + PD++ ++ + KE K SEA +++ +M R P +TY +
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 365 LFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
+ DG C+ + +A +LD M KG +P + ++ C+ + + ++ +G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 425 KICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ N + ++ C+ + + +LL+ ++
Sbjct: 181 IVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI 212
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 2/169 (1%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEM 176
+F+ L++A + R+ E+ + P TYN +I C + D A + D M
Sbjct: 82 TFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSM 141
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
S+G PD TF TLI+ C+ R+ E+ EM R + VT YT LI G C++G+
Sbjct: 142 ASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVT-YTTLIHGFCQVGD 200
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREG 285
L A + +EM+ G+ D ++ ++ L + +A +LE++++
Sbjct: 201 LDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 122/275 (44%), Gaps = 19/275 (6%)
Query: 78 RVPEPLLCH--VITFYARARQPSRAVQTFLSI----PSFRCQRTLKSFNTLL-HALLTCR 130
R+P L H V+ Y + V+ F I P+FR R+ +F LL HA CR
Sbjct: 80 RIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRS--TFLILLSHA---CR 134
Query: 131 QFDAVTELAARAGEFGA-----PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQ 185
D+ R PD T +I +R+ C G D A +L E+ + PD
Sbjct: 135 APDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDT 194
Query: 186 ATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKD 245
T+ L+ LC+ L +E +EM +F ++ + +T LI VC L A +
Sbjct: 195 YTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVS 254
Query: 246 EMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCREN 305
++ G K D LYNT++ K EA+ V ++M+E G E + +T N +I +
Sbjct: 255 KLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAG 314
Query: 306 NFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEG 338
EEA L + G +PD Y + +C++G
Sbjct: 315 RVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 105/229 (45%), Gaps = 6/229 (2%)
Query: 148 PDACTYNILIRASCLRGHAD--RAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
P T+ IL+ +C + + + M + G+ PDQ T + LCE R+ EA
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAK 179
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKK-GLKLDAALYNTLIN 264
+L +E+ + T Y L+K +CK +L + DEM +K D + LI+
Sbjct: 180 DLMKELTEKHSPPDTYT-YNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILID 238
Query: 265 ALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKP 322
+ + EA+ ++ ++ G + + N ++ +C + EA + + EGV+P
Sbjct: 239 NVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEP 298
Query: 323 DVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCR 371
D I YN + L K G+ EA M G PD TY +L +G+CR
Sbjct: 299 DQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 6/232 (2%)
Query: 182 RPDQATFGTLIHRLCE--NSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSW 239
RP ++TF L+ C +S + + M LE ++ +C+ G +
Sbjct: 119 RPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNN-GLEPDQVTTDIAVRSLCETGRVDE 177
Query: 240 AFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREG-GCEWNSVTCNVMI 298
A + E+ +K D YN L+ L K ++EMR+ + + V+ ++I
Sbjct: 178 AKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILI 237
Query: 299 GEYCRENNFEEAYRILD--GVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCA 356
C N EA ++ G G KPD YN + C K SEA+ ++ M G
Sbjct: 238 DNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVE 297
Query: 357 PDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEG 408
PD +TY TL GL + + EA + L M+ GY P + + ++ +C++G
Sbjct: 298 PDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 96/220 (43%), Gaps = 5/220 (2%)
Query: 227 LIKGVCKIGE--LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMRE 284
L+ C+ + +S R+ + MV GL+ D + + +L + G+ +EA +++E+ E
Sbjct: 128 LLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTE 187
Query: 285 GGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG---VKPDVIGYNVFLGWLCKEGKWS 341
++ T N ++ C+ + Y +D + VKPD++ + + + +C
Sbjct: 188 KHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLR 247
Query: 342 EAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFV 401
EAM L + G PD Y T+ G C + EAV V +M +G P N +
Sbjct: 248 EAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLI 307
Query: 402 SELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCK 441
L + G E L + G + + +++ +C+
Sbjct: 308 FGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 141/340 (41%), Gaps = 38/340 (11%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P YN +I A D A+ F +MRS G +PD+ T+ LIH +C+ + EA L
Sbjct: 178 PSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRL 237
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
++M +E T YT LI G G + A + + M + L + A T ++ +F
Sbjct: 238 VKQMEQEGNRPNVFT-YTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIF 296
Query: 268 KA-----------------------------------GKKEEALRVLEEMREGGCEWNSV 292
+ +E + L ++ E G +S
Sbjct: 297 RCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSS 356
Query: 293 TCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM 350
T N + + ++ E RI DG GVKP GY V + L ++SE M
Sbjct: 357 TFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQM 416
Query: 351 PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNF 410
G V +Y + D LC+ R+ A + L EM +G +P N F+S G+
Sbjct: 417 GVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDV 476
Query: 411 ELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFE 450
+ + VL L G + + ++++ +C+ +++ ++F+
Sbjct: 477 KKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFD 516
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/407 (21%), Positives = 161/407 (39%), Gaps = 37/407 (9%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
VI ++ A F + S C+ ++N L+H + D L + + G
Sbjct: 186 VIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEG 245
Query: 147 A-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRL------CENS 199
P+ TY ILI + G D A + + MR R + P++AT T +H + C+
Sbjct: 246 NRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKAF 305
Query: 200 RLREAFELKEEMFREFKLEGCVTIYTN------LIKGVCKIGELSW-------------- 239
+ F K+ + + + +N + + KIGE +
Sbjct: 306 EVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSCL 365
Query: 240 --------AFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNS 291
RI D V +G+K Y L+ AL A + E R L++M G +
Sbjct: 366 LKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSV 425
Query: 292 VTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHD 349
+ N +I C+ E A L ++ G+ P+++ +N FL G + +
Sbjct: 426 YSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEK 485
Query: 350 MPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGN 409
+ G PDV+T+ + + LCR ++ ++A EM+ G P N + C G+
Sbjct: 486 LLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGD 545
Query: 410 FELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ + + + G + ++ + CK KV ++ ELL ++
Sbjct: 546 TDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTML 592
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 140/323 (43%), Gaps = 9/323 (2%)
Query: 46 LSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEP-LLCHVITFYARARQPSRAVQTF 104
+ YD ++ L M E Q L ++ R +P+ ++ + + F
Sbjct: 321 VGYDAVLYCLSNNSMAKETGQFLRKI--GERGYIPDSSTFNAAMSCLLKGHDLVETCRIF 378
Query: 105 LSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDAC-TYNILIRASCLR 163
S + + L+ ALL ++F + G G + +YN +I C
Sbjct: 379 DGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKA 438
Query: 164 GHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMF-REFKLEGCVT 222
+ A EM+ RG+ P+ TF T + +++ + E++ FK + V
Sbjct: 439 RRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPD--VI 496
Query: 223 IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEM 282
++ +I +C+ E+ AF EM++ G++ + YN LI + G + ++++ +M
Sbjct: 497 TFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKM 556
Query: 283 REGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKW 340
+E G + N I +C+ ++A +L + G+KPD Y+ + L + G+
Sbjct: 557 KENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRE 616
Query: 341 SEAMDLFHDMPRRGCAPDVVTYR 363
SEA ++F + R GC PD T R
Sbjct: 617 SEAREMFSSIERHGCVPDSYTKR 639
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 162/384 (42%), Gaps = 22/384 (5%)
Query: 35 QTNHRP--FRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYA 92
Q +RP F +++L +I GR +++ L QL + R R P + TF
Sbjct: 243 QEGNRPNVFTYTILIDGFLIA--GR------VDEALKQLEM-MRVRKLNPNEATIRTFVH 293
Query: 93 ---RARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-AP 148
R P +A + + ++ +L+ L + + GE G P
Sbjct: 294 GIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIP 353
Query: 149 DACTYNILIRASCL-RGHA-DRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
D+ T+N + SCL +GH +FD SRGV+P + L+ L R E
Sbjct: 354 DSSTFNAAM--SCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDR 411
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
++M + L V Y +I +CK + A EM +G+ + +NT ++
Sbjct: 412 YLKQMGVD-GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGY 470
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDV 324
G ++ VLE++ G + + +T +++I CR ++A+ + G++P+
Sbjct: 471 SVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNE 530
Query: 325 IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDE 384
I YN+ + C G ++ LF M G +PD+ Y C+ R+ ++A +L
Sbjct: 531 ITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKT 590
Query: 385 MMFKGYAPLSKNLNAFVSELCQEG 408
M+ G P + + + L + G
Sbjct: 591 MLRIGLKPDNFTYSTLIKALSESG 614
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 120/286 (41%), Gaps = 16/286 (5%)
Query: 118 SFNTLLHALL-------TCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAF 170
+FN + LL TCR FD + G G Y +L++A
Sbjct: 357 TFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNG------YLVLVQALLNAQRFSEGD 410
Query: 171 ELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKG 230
+M G+ ++ +I LC+ R+ A EM ++ + + + + G
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEM-QDRGISPNLVTFNTFLSG 469
Query: 231 VCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWN 290
G++ + ++++ G K D ++ +IN L +A + ++A +EM E G E N
Sbjct: 470 YSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPN 529
Query: 291 SVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFH 348
+T N++I C + + + ++ ++ G+ PD+ YN + CK K +A +L
Sbjct: 530 EITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLK 589
Query: 349 DMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLS 394
M R G PD TY TL L + EA + + G P S
Sbjct: 590 TMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDS 635
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 37/184 (20%)
Query: 255 DAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIG--------EYC---- 302
D +L + L NALF+ G ++ +L+E+R+ G + V+IG +YC
Sbjct: 109 DQSLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVF 168
Query: 303 -----------------------RENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKE 337
+ N+ + AY + +G KPD YN+ + +CK+
Sbjct: 169 AQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKK 228
Query: 338 GKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNL 397
G EA+ L M + G P+V TY L DG + EA+ L+ M + P +
Sbjct: 229 GVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATI 288
Query: 398 NAFV 401
FV
Sbjct: 289 RTFV 292
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 114/241 (47%), Gaps = 11/241 (4%)
Query: 156 LIRASCLRGHADRAFELFDEMRSRGVRPDQAT-FGTLIHRLCENSRLREAFELKEEMFRE 214
L + C GH + A + D + P + +L + C+ EA E +F
Sbjct: 207 LFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEA----EALFDH 262
Query: 215 FKLEGCVT---IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGK 271
+++G +YT L+K CK ++ A R+ MV++ +LD ++NTLI+ K G
Sbjct: 263 MEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGM 322
Query: 272 KEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRIL---DGVEGVKPDVIGYN 328
++ + +M + G + N T ++MIG YC+E N + A R+ G E + +V Y
Sbjct: 323 LDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYT 382
Query: 329 VFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFK 388
+ K+G +A+DL M G PD +TY L L + + + A+V+L ++
Sbjct: 383 NLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDN 442
Query: 389 G 389
G
Sbjct: 443 G 443
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 92/394 (23%), Positives = 164/394 (41%), Gaps = 18/394 (4%)
Query: 41 FRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRA 100
R ++ Y II LG+ + E E+ ++ L++ + E +I YAR + A
Sbjct: 578 LRPTVAIYSSIIGSLGKQGRVVEAEETFAKM-LESGIQPDEIAYMIMINTYARNGRIDEA 636
Query: 101 -------VQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTY 153
V+ FL SF + F + C+ D + E + +P+ Y
Sbjct: 637 NELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLE------DGLSPNVVLY 690
Query: 154 NILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFR 213
LI +G +F LF M ++ D + TL+ L ++ ++ E +
Sbjct: 691 TALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGK 750
Query: 214 EFKLEGCVTI--YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGK 271
E L+ + ++ + G S+A + + VKK + + L+NT+I AG+
Sbjct: 751 EKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGK-VKKSIIPNLYLHNTIITGYCAAGR 809
Query: 272 KEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFL 331
+EA LE M++ G N VT +++ + + E A + +G +PD + Y+ L
Sbjct: 810 LDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFEGTN-CEPDQVMYSTLL 868
Query: 332 GWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYA 391
LC + +A+ L +M + G P+ +Y L LC R EAV V+ +M
Sbjct: 869 KGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIW 928
Query: 392 PLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGK 425
P S N + LC+E + + + G+
Sbjct: 929 PRSINHTWLIYILCEEKKLREARALFAIMVQSGR 962
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 145/339 (42%), Gaps = 41/339 (12%)
Query: 153 YNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMF 212
Y L C RG A A LFD M G D+ + L+ C+++ + A L M
Sbjct: 240 YKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMV 299
Query: 213 -REFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGK 271
R F+L+ C I+ LI G K+G L + +M+KKG++ + Y+ +I + K G
Sbjct: 300 ERSFELDPC--IFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGN 357
Query: 272 KEEALRVLEEMREGGCEWNSVTC--NVMIGEYCRENNFEEAY----RILDGVEGVKPDVI 325
+ ALR+ +V C N++ G Y ++ ++A R+LD G+ PD I
Sbjct: 358 VDYALRLFVNNTGSEDISRNVHCYTNLIFGFY-KKGGMDKAVDLLMRMLD--NGIVPDHI 414
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPD--------------------------- 358
Y V L L K + AM + + GC +
Sbjct: 415 TYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDAN 474
Query: 359 --VVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTV 416
V + LC R + A+ +++M+ G PL + N+ + L QE E L+++
Sbjct: 475 LAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASL 534
Query: 417 LSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
++ + + + + +V++ +CK +F ++DA+
Sbjct: 535 VNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAM 573
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 133/335 (39%), Gaps = 43/335 (12%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEM 176
S+N+++ L + + L E PD TY I++ C + D AF + D M
Sbjct: 514 SYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAM 573
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
G+RP A + ++I L + R+ EA E +M E ++ Y +I + G
Sbjct: 574 EELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKML-ESGIQPDEIAYMIMINTYARNGR 632
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
+ A + +E+VK L+ + Y LI+ K G E+ + L++M E G N V
Sbjct: 633 IDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTA 692
Query: 297 MIGEYCRENNFEEAYRI--LDGVEGVKPDVIGYNVFLGWLCKE----------------- 337
+IG + ++ +F+ ++ + L G +K D I Y L L +
Sbjct: 693 LIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEK 752
Query: 338 ---------------------GKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFR 376
G S AM++ + ++ P++ + T+ G C +
Sbjct: 753 LLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKV-KKSIIPNLYLHNTIITGYCAAGRLD 811
Query: 377 EAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
EA L+ M +G P + + G+ E
Sbjct: 812 EAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIE 846
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 132/339 (38%), Gaps = 31/339 (9%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
D C +N LI G D+ +F +M +GV+ + T+ +I C+ + A L
Sbjct: 306 DPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLF 365
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
+ V YTNLI G K G + A + M+ G+ D Y L+ L K
Sbjct: 366 VNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPK 425
Query: 269 AGKKEEALRVLEEMREGGCEWN----------SVTCNVMIGEY----------------- 301
+ + A+ +L+ + + GC N V ++GE
Sbjct: 426 CHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTT 485
Query: 302 --CRENNFEEAY-RILDGVE-GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAP 357
C + N+ A RI V G P YN + L +E + L + + P
Sbjct: 486 ALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVP 545
Query: 358 DVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVL 417
DV TY + + LC+ A ++D M G P ++ + L ++G
Sbjct: 546 DVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETF 605
Query: 418 SDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
+ + G +E + ++++ + ++ E+ EL++ +V
Sbjct: 606 AKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVV 644
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 7/240 (2%)
Query: 143 GEFGAPDA----CTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCEN 198
GE DA ++ A C + + A ++M + G P ++ ++I L +
Sbjct: 466 GEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQE 525
Query: 199 SRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAAL 258
+ + + L + +E V Y ++ +CK + AF I D M + GL+ A+
Sbjct: 526 NIIEDLASLVN-IIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAI 584
Query: 259 YNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV- 317
Y+++I +L K G+ EA +M E G + + + +MI Y R +EA +++ V
Sbjct: 585 YSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVV 644
Query: 318 -EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFR 376
++P Y V + K G + M G +P+VV Y L + F+
Sbjct: 645 KHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFK 704
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 134/334 (40%), Gaps = 38/334 (11%)
Query: 153 YNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMF 212
Y LI +G D+A +L M G+ PD T+ L+ L + L+ A + + +
Sbjct: 381 YTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSIL 440
Query: 213 R----------------EFKLE----------------GCVTIYTNLIKGVCKIGELSWA 240
E K+E G + T L I LS
Sbjct: 441 DNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALS-- 498
Query: 241 FRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGE 300
RI ++MV G YN++I LF+ E+ ++ ++E + T +++ E
Sbjct: 499 -RI-EKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNE 556
Query: 301 YCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPD 358
C++N+ + A+ I+D +E G++P V Y+ +G L K+G+ EA + F M G PD
Sbjct: 557 LCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPD 616
Query: 359 VVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLS 418
+ Y + + R + EA +++E++ P S +S + G E L
Sbjct: 617 EIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLD 676
Query: 419 DLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+ G N ++ ++ K SF L
Sbjct: 677 KMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLF 710
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 4/219 (1%)
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREG-GCEWNSVTCN 295
+S A + D V G++LD++ Y LI L + G+ A + G G +S +
Sbjct: 76 ISEAALVADFAVDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLD 135
Query: 296 VMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR 353
M+ + F+EA LD + G P ++ + LC + ++ EA F + R
Sbjct: 136 SMVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKER 195
Query: 354 GCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNL-NAFVSELCQEGNFEL 412
G + + LF GLC EA+ +LD + PL NL + C+ G
Sbjct: 196 GSGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAE 255
Query: 413 LSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFEL 451
+ + G ++ ++ ++ CK + + L
Sbjct: 256 AEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRL 294
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 158/354 (44%), Gaps = 11/354 (3%)
Query: 44 SLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQT 103
S + Y+ I+ LG+ + E QV ++ V E ++ YA A + AV
Sbjct: 142 SSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGF-VNEKTYEVLLNRYAAAHKVDEAVGV 200
Query: 104 FLSIPSFRCQRTLKSFNTLLHALLTCRQFD-AVTELAARAGEFGAPDACTYNILIRASCL 162
F F L +F+ LL L + + A T +R EFG D N+++ C+
Sbjct: 201 FERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGC-DIKAMNMILNGWCV 259
Query: 163 RGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVT 222
G+ A + ++ + RPD ++GT+I+ L + +L +A EL M+ + + V
Sbjct: 260 LGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMW-DTRRNPDVK 318
Query: 223 IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEM 282
I N+I +C + A + E+ +KG + YN+L+ L K + E+ ++EEM
Sbjct: 319 ICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEM 378
Query: 283 --REGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIG--YNVFLGWLCKEG 338
+ G C N VT + ++ R + + +L+ + K ++ YN+ +
Sbjct: 379 ELKGGSCSPNDVTFSYLLKYSQRSKDVD---IVLERMAKNKCEMTSDLYNLMFRLYVQWD 435
Query: 339 KWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
K + +++ +M R G PD TY GL + EA+ EMM KG P
Sbjct: 436 KEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVP 489
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 116/273 (42%), Gaps = 41/273 (15%)
Query: 171 ELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKG 230
++FDEM R ++ T+ L++R ++ EA + E +EF ++ + + L+
Sbjct: 164 QVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERR-KEFGIDDDLVAFHGLLMW 222
Query: 231 VCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWN 290
+C+ + +A LF + + RE GC+
Sbjct: 223 LCRYKHVEFA-----------------------ETLFCSRR-----------REFGCDIK 248
Query: 291 SVTCNVMIGEYCRENNFEEAYRILDGVEGVK--PDVIGYNVFLGWLCKEGKWSEAMDLFH 348
++ N+++ +C N EA R + K PDV+ Y + L K+GK +AM+L+
Sbjct: 249 AM--NMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYR 306
Query: 349 DMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEG 408
M PDV + D LC ++ EA+ V E+ KG P N+ + LC+
Sbjct: 307 AMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIR 366
Query: 409 NFELLSTVLSDLTSKGKICNEGIWDVVLSMVCK 441
E + ++ ++ KG C+ DV S + K
Sbjct: 367 RTEKVWELVEEMELKGGSCSPN--DVTFSYLLK 397
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 1/236 (0%)
Query: 223 IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEM 282
+Y ++ + K+ ++ DEM K+ ++ Y L+N A K +EA+ V E
Sbjct: 145 LYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERR 204
Query: 283 REGGCEWNSVTCNVMIGEYCRENNFEEAYRIL-DGVEGVKPDVIGYNVFLGWLCKEGKWS 341
+E G + + V + ++ CR + E A + D+ N+ L C G
Sbjct: 205 KEFGIDDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVH 264
Query: 342 EAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFV 401
EA + D+ C PDVV+Y T+ + L + + +A+ + M P K N +
Sbjct: 265 EAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVI 324
Query: 402 SELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALVL 457
LC + V +++ KG N ++ +L +CK + + +EL++ + L
Sbjct: 325 DALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMEL 380
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 145/354 (40%), Gaps = 16/354 (4%)
Query: 47 SYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITF--YARARQPSRAVQTF 104
SY +I+ LGR K+ M VL + + V L C I + R RA++ F
Sbjct: 153 SYSVILRALGRRKLFSFMMDVLKGMVCEG---VNPDLECLTIAMDSFVRVHYVRRAIELF 209
Query: 105 LSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTEL-AARAGEFGAPDACTYNILIRASCLR 163
SF + + +SFN LL L A + A+ G D+C+YNI+I
Sbjct: 210 EESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNI-PFDSCSYNIMISGWSKL 268
Query: 164 GHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCV-- 221
G + ++ EM G PD ++ LI L R+ ++ E+ F K +G V
Sbjct: 269 GEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEI----FDNIKHKGNVPD 324
Query: 222 -TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLE 280
+Y +I + + R M+ + + + Y+ L++ L K K +AL + E
Sbjct: 325 ANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFE 384
Query: 281 EMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEG 338
EM G + + C A I G + Y + L L + G
Sbjct: 385 EMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFG 444
Query: 339 KWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
K ++++ +M G DV Y + DGLC AV+V++E M KG+ P
Sbjct: 445 KCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCP 498
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 120/263 (45%), Gaps = 6/263 (2%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
D +Y++++RA R ++ M GV PD + +R A EL
Sbjct: 150 DVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELF 209
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKG-LKLDAALYNTLINALF 267
EE F ++ + L++ +C+ +S A + + KKG + D+ YN +I+
Sbjct: 210 EES-ESFGVKCSTESFNALLRCLCERSHVSAAKSVFN--AKKGNIPFDSCSYNIMISGWS 266
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVI 325
K G+ EE +VL+EM E G + ++ + +I R ++ I D ++ G PD
Sbjct: 267 KLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDAN 326
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
YN + + E+M + M C P++ TY L GL + R+ +A+ + +EM
Sbjct: 327 VYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEM 386
Query: 386 MFKGYAPLSKNLNAFVSELCQEG 408
+ +G P + + +F+ LC G
Sbjct: 387 LSRGVLPTTGLVTSFLKPLCSYG 409
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 152/379 (40%), Gaps = 44/379 (11%)
Query: 114 RTLKSFNTLLHALLTCRQFDAVTE-LAARAGEFGAPDACTYNILIRASCLRGHADRAFEL 172
+ + S++ +L AL + F + + L E PD I + + + RA EL
Sbjct: 149 KDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIEL 208
Query: 173 FDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVC 232
F+E S GV+ +F L+ LCE S + A + + C Y +I G
Sbjct: 209 FEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCS--YNIMISGWS 266
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
K+GE+ ++ EMV+ G D Y+ LI L + G+ +++ + + ++ G ++
Sbjct: 267 KLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDAN 326
Query: 293 TCNVMIGEYCRENNFEEAYR----ILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFH 348
N MI + +F+E+ R +LD E +P++ Y+ + L K K S+A+++F
Sbjct: 327 VYNAMICNFISARDFDESMRYYRRMLD--EECEPNLETYSKLVSGLIKGRKVSDALEIFE 384
Query: 349 DMPRRGCAPDVVTYRTLFDGLCRWRQFREAVV---------------------------- 380
+M RG P + LC + A+V
Sbjct: 385 EMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFG 444
Query: 381 -------VLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWD 433
V DEM GY + V LC G+ E V+ + KG N ++
Sbjct: 445 KCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYS 504
Query: 434 VVLSMVCKPEKVPESFELL 452
+ S + K +++L
Sbjct: 505 RLSSKLMASNKTELAYKLF 523
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 111/252 (44%), Gaps = 13/252 (5%)
Query: 46 LSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEP-----LLCHVITFYARARQPSRA 100
LSY +I LGR + + ++ ++ + VP+ ++C+ I+ AR +
Sbjct: 291 LSYSHLIEGLGRTGRINDSVEIFD--NIKHKGNVPDANVYNAMICNFIS----ARDFDES 344
Query: 101 VQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRA 159
++ + + C+ L++++ L+ L+ R+ E+ G P ++
Sbjct: 345 MRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKP 404
Query: 160 SCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEG 219
C G A ++ + R G R ++ + L+ RL + + +EM +E
Sbjct: 405 LCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEM-QESGYPS 463
Query: 220 CVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVL 279
V +Y ++ G+C IG L A + +E ++KG + +Y+ L + L + K E A ++
Sbjct: 464 DVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLF 523
Query: 280 EEMREGGCEWNS 291
++++ N+
Sbjct: 524 LKIKKARATENA 535
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 151/344 (43%), Gaps = 8/344 (2%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEM 176
++N L++A + + E+ + + G PD T+NI++ A +A F+ M
Sbjct: 215 TYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELM 274
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC---VTIYTNLIKGVCK 233
+ VRPD TF +I+ L + + +A +L M RE + E C V +T+++
Sbjct: 275 KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM-REKRAE-CRPDVVTFTSIMHLYSV 332
Query: 234 IGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
GE+ + + MV +GLK + YN L+ A G AL VL ++++ G + V+
Sbjct: 333 KGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVS 392
Query: 294 CNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
++ Y R +A + + E KP+V+ YN + G +EA+++F M
Sbjct: 393 YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 452
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
+ G P+VV+ TL R ++ VL +G + N+ + E
Sbjct: 453 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 512
Query: 412 LLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
+ + K + + +++S C+ K PE+ L +
Sbjct: 513 KAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 556
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 130/313 (41%), Gaps = 55/313 (17%)
Query: 153 YNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMF 212
YN++IR D+A LF EM+ +PD T
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAET------------------------- 180
Query: 213 REFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKK 272
Y LI + G+ WA + D+M++ + + YN LINA +G
Sbjct: 181 -----------YDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNW 229
Query: 273 EEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VKPDVIGYNVF 330
EAL V ++M + G + VT N+++ Y + +A + ++G V+PD +N+
Sbjct: 230 REALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNII 289
Query: 331 LGWLCKEGKWSEAMDLFHDM--PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFK 388
+ L K G+ S+A+DLF+ M R C PDVVT+ ++ + V + M+ +
Sbjct: 290 IYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAE 349
Query: 389 GYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVC-------- 440
G P + NA + G + T LS L G I GI V+S C
Sbjct: 350 GLKPNIVSYNALMGAYAVHG---MSGTALSVL---GDIKQNGIIPDVVSYTCLLNSYGRS 403
Query: 441 -KPEKVPESFELL 452
+P K E F ++
Sbjct: 404 RQPGKAKEVFLMM 416
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 116/266 (43%), Gaps = 7/266 (2%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PDA TY+ LI A G A L D+M + P ++T+ LI+ + REA E+
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 235
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIG-ELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
++M VT N++ K G + S A + M ++ D +N +I L
Sbjct: 236 CKKMTDNGVGPDLVT--HNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCL 293
Query: 267 FKAGKKEEALRVLEEMRE--GGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKP 322
K G+ +AL + MRE C + VT ++ Y + E + + + EG+KP
Sbjct: 294 SKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKP 353
Query: 323 DVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVL 382
+++ YN +G G A+ + D+ + G PDVV+Y L + R RQ +A V
Sbjct: 354 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 413
Query: 383 DEMMFKGYAPLSKNLNAFVSELCQEG 408
M + P NA + G
Sbjct: 414 LMMRKERRKPNVVTYNALIDAYGSNG 439
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 161/377 (42%), Gaps = 56/377 (14%)
Query: 80 PEPLLCHVITF-YARARQPSRAVQTFLSIPSFR--CQRTLKSFNTLLH------ALLTCR 130
P+ ++I + ++ Q S+A+ F S+ R C+ + +F +++H + CR
Sbjct: 281 PDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCR 340
Query: 131 QFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGT 190
AV E A E P+ +YN L+ A + G + A + +++ G+ PD ++
Sbjct: 341 ---AVFE--AMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTC 395
Query: 191 LIHRLCENSRLREAFELKEE--MFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMV 248
L++ R R+ + KE M R+ + + V Y LI G L+ A I +M
Sbjct: 396 LLNSY---GRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 452
Query: 249 KKGLK-----------------------------------LDAALYNTLINALFKAGKKE 273
+ G+K L+ A YN+ I + A + E
Sbjct: 453 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 512
Query: 274 EALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIG--YNVFL 331
+A+ + + MR+ + +SVT ++I CR + + EA L +E + + Y+ L
Sbjct: 513 KAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVL 572
Query: 332 GWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYA 391
K+G+ +EA +F+ M GC PDV+ Y ++ ++ +A + EM G
Sbjct: 573 CAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIE 632
Query: 392 PLSKNLNAFVSELCQEG 408
P S +A + + G
Sbjct: 633 PDSIACSALMRAFNKGG 649
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 150/371 (40%), Gaps = 58/371 (15%)
Query: 116 LKSFNTLLHALLTCRQFD-AVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFD 174
L + N +L A + RQ+ A++ G PD T+NI+I G + +A +LF+
Sbjct: 248 LVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 307
Query: 175 EMRSRGV--RPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVC 232
MR + RPD TF +++H + + E M E L+ + Y L+
Sbjct: 308 SMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAE-GLKPNIVSYNALMGAYA 366
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
G A + ++ + G+ D Y L+N+ ++ + +A V MR+ + N V
Sbjct: 367 VHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVV 426
Query: 293 TCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVI------------------------- 325
T N +I Y EA I +E G+KP+V+
Sbjct: 427 TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAA 486
Query: 326 ----------GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQF 375
YN +G + +A+ L+ M ++ D VT+ L G CR ++
Sbjct: 487 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 546
Query: 376 REAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICN-EGIWDV 434
EA+ L EM PL+K E+ S+VL + +G++ E I++
Sbjct: 547 PEAISYLKEMEDLSI-PLTK---------------EVYSSVLCAYSKQGQVTEAESIFNQ 590
Query: 435 VLSMVCKPEKV 445
+ C+P+ +
Sbjct: 591 MKMAGCEPDVI 601
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 116/301 (38%), Gaps = 37/301 (12%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
++ Y R+RQP +A + FL + R +
Sbjct: 396 LLNSYGRSRQPGKAKEVFLMMRKERRK--------------------------------- 422
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
P+ TYN LI A G A E+F +M G++P+ + TL+ C S+ + +
Sbjct: 423 -PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLA-ACSRSKKKVNVD 480
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
+ + Y + I EL A + M KK +K D+ + LI+
Sbjct: 481 TVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGS 540
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDV 324
+ K EA+ L+EM + + ++ Y ++ EA I + ++ G +PDV
Sbjct: 541 CRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDV 600
Query: 325 IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDE 384
I Y L KW +A +LF +M G PD + L + Q V++D
Sbjct: 601 IAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDL 660
Query: 385 M 385
M
Sbjct: 661 M 661
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 80/200 (40%), Gaps = 17/200 (8%)
Query: 211 MFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAG 270
+ RE GC+ + N+ K W ++K +YN +I +
Sbjct: 113 LIRELSRRGCIELCVNVFK---------WM------KIQKNYCARNDIYNMMIRLHARHN 157
Query: 271 KKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYN 328
++A + EM++ C+ ++ T + +I + R + A ++D + + P YN
Sbjct: 158 WVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYN 217
Query: 329 VFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFK 388
+ G W EA+++ M G PD+VT+ + RQ+ +A+ + M
Sbjct: 218 NLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGA 277
Query: 389 GYAPLSKNLNAFVSELCQEG 408
P + N + L + G
Sbjct: 278 KVRPDTTTFNIIIYCLSKLG 297
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 151/344 (43%), Gaps = 8/344 (2%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEM 176
++N L++A + + E+ + + G PD T+NI++ A +A F+ M
Sbjct: 83 TYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELM 142
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC---VTIYTNLIKGVCK 233
+ VRPD TF +I+ L + + +A +L M RE + E C V +T+++
Sbjct: 143 KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSM-REKRAE-CRPDVVTFTSIMHLYSV 200
Query: 234 IGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
GE+ + + MV +GLK + YN L+ A G AL VL ++++ G + V+
Sbjct: 201 KGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVS 260
Query: 294 CNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
++ Y R +A + + E KP+V+ YN + G +EA+++F M
Sbjct: 261 YTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 320
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
+ G P+VV+ TL R ++ VL +G + N+ + E
Sbjct: 321 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 380
Query: 412 LLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
+ + K + + +++S C+ K PE+ L +
Sbjct: 381 KAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 424
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 130/313 (41%), Gaps = 55/313 (17%)
Query: 153 YNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMF 212
YN++IR D+A LF EM+ +PD T
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAET------------------------- 48
Query: 213 REFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKK 272
Y LI + G+ WA + D+M++ + + YN LINA +G
Sbjct: 49 -----------YDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNW 97
Query: 273 EEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VKPDVIGYNVF 330
EAL V ++M + G + VT N+++ Y + +A + ++G V+PD +N+
Sbjct: 98 REALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNII 157
Query: 331 LGWLCKEGKWSEAMDLFHDM--PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFK 388
+ L K G+ S+A+DLF+ M R C PDVVT+ ++ + V + M+ +
Sbjct: 158 IYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAE 217
Query: 389 GYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVC-------- 440
G P + NA + G + T LS L G I GI V+S C
Sbjct: 218 GLKPNIVSYNALMGAYAVHG---MSGTALSVL---GDIKQNGIIPDVVSYTCLLNSYGRS 271
Query: 441 -KPEKVPESFELL 452
+P K E F ++
Sbjct: 272 RQPGKAKEVFLMM 284
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 116/266 (43%), Gaps = 7/266 (2%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PDA TY+ LI A G A L D+M + P ++T+ LI+ + REA E+
Sbjct: 44 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 103
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIG-ELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
++M VT N++ K G + S A + M ++ D +N +I L
Sbjct: 104 CKKMTDNGVGPDLVT--HNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCL 161
Query: 267 FKAGKKEEALRVLEEMRE--GGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKP 322
K G+ +AL + MRE C + VT ++ Y + E + + + EG+KP
Sbjct: 162 SKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKP 221
Query: 323 DVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVL 382
+++ YN +G G A+ + D+ + G PDVV+Y L + R RQ +A V
Sbjct: 222 NIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVF 281
Query: 383 DEMMFKGYAPLSKNLNAFVSELCQEG 408
M + P NA + G
Sbjct: 282 LMMRKERRKPNVVTYNALIDAYGSNG 307
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 161/377 (42%), Gaps = 56/377 (14%)
Query: 80 PEPLLCHVITF-YARARQPSRAVQTFLSIPSFR--CQRTLKSFNTLLH------ALLTCR 130
P+ ++I + ++ Q S+A+ F S+ R C+ + +F +++H + CR
Sbjct: 149 PDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCR 208
Query: 131 QFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGT 190
AV E A E P+ +YN L+ A + G + A + +++ G+ PD ++
Sbjct: 209 ---AVFE--AMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTC 263
Query: 191 LIHRLCENSRLREAFELKEE--MFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMV 248
L++ R R+ + KE M R+ + + V Y LI G L+ A I +M
Sbjct: 264 LLNSY---GRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQME 320
Query: 249 KKGLK-----------------------------------LDAALYNTLINALFKAGKKE 273
+ G+K L+ A YN+ I + A + E
Sbjct: 321 QDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELE 380
Query: 274 EALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIG--YNVFL 331
+A+ + + MR+ + +SVT ++I CR + + EA L +E + + Y+ L
Sbjct: 381 KAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVL 440
Query: 332 GWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYA 391
K+G+ +EA +F+ M GC PDV+ Y ++ ++ +A + EM G
Sbjct: 441 CAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIE 500
Query: 392 PLSKNLNAFVSELCQEG 408
P S +A + + G
Sbjct: 501 PDSIACSALMRAFNKGG 517
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 150/371 (40%), Gaps = 58/371 (15%)
Query: 116 LKSFNTLLHALLTCRQFD-AVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFD 174
L + N +L A + RQ+ A++ G PD T+NI+I G + +A +LF+
Sbjct: 116 LVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFN 175
Query: 175 EMRSRGV--RPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVC 232
MR + RPD TF +++H + + E M E L+ + Y L+
Sbjct: 176 SMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAE-GLKPNIVSYNALMGAYA 234
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
G A + ++ + G+ D Y L+N+ ++ + +A V MR+ + N V
Sbjct: 235 VHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVV 294
Query: 293 TCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVI------------------------- 325
T N +I Y EA I +E G+KP+V+
Sbjct: 295 TYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAA 354
Query: 326 ----------GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQF 375
YN +G + +A+ L+ M ++ D VT+ L G CR ++
Sbjct: 355 QSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKY 414
Query: 376 REAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICN-EGIWDV 434
EA+ L EM PL+K E+ S+VL + +G++ E I++
Sbjct: 415 PEAISYLKEMEDLSI-PLTK---------------EVYSSVLCAYSKQGQVTEAESIFNQ 458
Query: 435 VLSMVCKPEKV 445
+ C+P+ +
Sbjct: 459 MKMAGCEPDVI 469
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 116/301 (38%), Gaps = 37/301 (12%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
++ Y R+RQP +A + FL + R +
Sbjct: 264 LLNSYGRSRQPGKAKEVFLMMRKERRK--------------------------------- 290
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
P+ TYN LI A G A E+F +M G++P+ + TL+ C S+ + +
Sbjct: 291 -PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAA-CSRSKKKVNVD 348
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
+ + Y + I EL A + M KK +K D+ + LI+
Sbjct: 349 TVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGS 408
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDV 324
+ K EA+ L+EM + + ++ Y ++ EA I + ++ G +PDV
Sbjct: 409 CRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDV 468
Query: 325 IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDE 384
I Y L KW +A +LF +M G PD + L + Q V++D
Sbjct: 469 IAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDL 528
Query: 385 M 385
M
Sbjct: 529 M 529
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 2/153 (1%)
Query: 258 LYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV 317
+YN +I + ++A + EM++ C+ ++ T + +I + R + A ++D +
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 318 --EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQF 375
+ P YN + G W EA+++ M G PD+VT+ + RQ+
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 376 REAVVVLDEMMFKGYAPLSKNLNAFVSELCQEG 408
+A+ + M P + N + L + G
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLG 165
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 160/373 (42%), Gaps = 13/373 (3%)
Query: 91 YARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APD 149
+ A+ S+A++ + SIP + + N++L L+ + D+ +L + G PD
Sbjct: 141 FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPD 200
Query: 150 ACTYNILIRASCLR--GHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
TYN L+ A C++ +A EL E+ G++ D +GT++ N R EA
Sbjct: 201 VVTYNTLL-AGCIKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEA--- 256
Query: 208 KEEMFREFKLEG---CVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLIN 264
E ++ K+EG + Y++L+ G+ A + EM GL + + TL+
Sbjct: 257 -ENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLK 315
Query: 265 ALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VKP 322
K G + + +L E+ G N + +++ + EEA I D ++G V+
Sbjct: 316 VYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRS 375
Query: 323 DVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVL 382
D ++ + LC+ ++ EA +L D D+V T+ CR + + ++
Sbjct: 376 DGYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMM 435
Query: 383 DEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKP 442
+M + +P + + +E L D+ SKG E + ++ + K
Sbjct: 436 KKMDEQAVSPDYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKI 495
Query: 443 EKVPESFELLDAL 455
E+F + + L
Sbjct: 496 RAQAEAFSVYNML 508
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 133/301 (44%), Gaps = 6/301 (1%)
Query: 154 NILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFR 213
N+++R + G +LF+ M+ G + +T+ + I + + +A E+ + +
Sbjct: 102 NVILRDFGISGRWQDLIQLFEWMQQHG-KISVSTYSSCI-KFVGAKNVSKALEIYQSIPD 159
Query: 214 EFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKK- 272
E + V I +++ + K G+L ++ D+M + GLK D YNTL+ K
Sbjct: 160 E-STKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGY 218
Query: 273 EEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILD--GVEGVKPDVIGYNVF 330
+A+ ++ E+ G + +SV ++ EEA + VEG P++ Y+
Sbjct: 219 PKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSL 278
Query: 331 LGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGY 390
L +G + +A +L +M G P+ V TL + F + +L E+ GY
Sbjct: 279 LNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGY 338
Query: 391 APLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFE 450
A + L + G E ++ D+ KG + +++S +C+ ++ E+ E
Sbjct: 339 AENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKE 398
Query: 451 L 451
L
Sbjct: 399 L 399
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 120/246 (48%), Gaps = 4/246 (1%)
Query: 215 FKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEE 274
FK +G YT ++ + + + ++ DEMV+ G + + YN LI++ +A E
Sbjct: 360 FKHDG--HTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 275 ALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLG 332
A+ V +M+E GC+ + VT +I + + + A + ++ G+ PD Y+V +
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 333 WLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
L K G A LF +M +GC P++VTY + D + R ++ A+ + +M G+ P
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 393 LSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+ + L G E V +++ K I +E ++ +++ + K V ++++
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 453 DALVLA 458
A++ A
Sbjct: 598 QAMLHA 603
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 146/337 (43%), Gaps = 11/337 (3%)
Query: 7 ISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQ 66
I ++ + +L+ D A F Q F+H +Y ++ LGRAK + +
Sbjct: 329 IDAYQANQVLKQMNDYGNALGFFYWLKRQPG---FKHDGHTYTTMVGNLGRAKQFGAINK 385
Query: 67 VLHQLHLDTRHRVPEPLLCH-VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHA 125
+L ++ D P + + +I Y RA + A+ F + C+ ++ TL+
Sbjct: 386 LLDEMVRDGCQ--PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 126 LLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPD 184
D ++ R G +PD TY+++I GH A +LF EM +G P+
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 185 QATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIK 244
T+ ++ + + A +L +M + E Y+ +++ + G L A +
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDM-QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 245 DEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRE 304
EM +K D +Y L++ KAG E+A + + M G N TCN ++ + R
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 305 NNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGK 339
N EAY +L + G++P + Y + L C +G+
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGR 658
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 133/298 (44%), Gaps = 5/298 (1%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEM 176
++ T++ L +QF A+ +L G P+ TYN LI + + + A +F++M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
+ G +PD+ T+ TLI + L A ++ + M + L Y+ +I + K G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QAGGLSPDTFTYSVIINCLGKAGH 484
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
L A ++ EMV +G + YN +++ KA + AL++ +M+ G E + VT ++
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 297 MIGEYCRENNFEEAYRILDGVEGVK--PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
++ EEA + ++ PD Y + + K G +A + M G
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFEL 412
P+V T +L R + EA +L M+ G P + +S C +G +L
Sbjct: 605 LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSKL 661
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 120/246 (48%), Gaps = 4/246 (1%)
Query: 215 FKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEE 274
FK +G YT ++ + + + ++ DEMV+ G + + YN LI++ +A E
Sbjct: 360 FKHDG--HTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 275 ALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLG 332
A+ V +M+E GC+ + VT +I + + + A + ++ G+ PD Y+V +
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 333 WLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
L K G A LF +M +GC P++VTY + D + R ++ A+ + +M G+ P
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 393 LSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+ + L G E V +++ K I +E ++ +++ + K V ++++
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 453 DALVLA 458
A++ A
Sbjct: 598 QAMLHA 603
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 146/337 (43%), Gaps = 11/337 (3%)
Query: 7 ISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQ 66
I ++ + +L+ D A F Q F+H +Y ++ LGRAK + +
Sbjct: 329 IDAYQANQVLKQMNDYGNALGFFYWLKRQPG---FKHDGHTYTTMVGNLGRAKQFGAINK 385
Query: 67 VLHQLHLDTRHRVPEPLLCH-VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHA 125
+L ++ D P + + +I Y RA + A+ F + C+ ++ TL+
Sbjct: 386 LLDEMVRDGCQ--PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 126 LLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPD 184
D ++ R G +PD TY+++I GH A +LF EM +G P+
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 185 QATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIK 244
T+ ++ + + A +L +M + E Y+ +++ + G L A +
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDM-QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 245 DEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRE 304
EM +K D +Y L++ KAG E+A + + M G N TCN ++ + R
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 305 NNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGK 339
N EAY +L + G++P + Y + L C +G+
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGR 658
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 133/298 (44%), Gaps = 5/298 (1%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEM 176
++ T++ L +QF A+ +L G P+ TYN LI + + + A +F++M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
+ G +PD+ T+ TLI + L A ++ + M + L Y+ +I + K G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QAGGLSPDTFTYSVIINCLGKAGH 484
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
L A ++ EMV +G + YN +++ KA + AL++ +M+ G E + VT ++
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 297 MIGEYCRENNFEEAYRILDGVEGVK--PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
++ EEA + ++ PD Y + + K G +A + M G
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFEL 412
P+V T +L R + EA +L M+ G P + +S C +G +L
Sbjct: 605 LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSKL 661
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 120/246 (48%), Gaps = 4/246 (1%)
Query: 215 FKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEE 274
FK +G YT ++ + + + ++ DEMV+ G + + YN LI++ +A E
Sbjct: 360 FKHDG--HTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 275 ALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLG 332
A+ V +M+E GC+ + VT +I + + + A + ++ G+ PD Y+V +
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 333 WLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
L K G A LF +M +GC P++VTY + D + R ++ A+ + +M G+ P
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 393 LSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+ + L G E V +++ K I +E ++ +++ + K V ++++
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 453 DALVLA 458
A++ A
Sbjct: 598 QAMLHA 603
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 146/337 (43%), Gaps = 11/337 (3%)
Query: 7 ISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQ 66
I ++ + +L+ D A F Q F+H +Y ++ LGRAK + +
Sbjct: 329 IDAYQANQVLKQMNDYGNALGFFYWLKRQPG---FKHDGHTYTTMVGNLGRAKQFGAINK 385
Query: 67 VLHQLHLDTRHRVPEPLLCH-VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHA 125
+L ++ D P + + +I Y RA + A+ F + C+ ++ TL+
Sbjct: 386 LLDEMVRDGCQ--PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDI 443
Query: 126 LLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPD 184
D ++ R G +PD TY+++I GH A +LF EM +G P+
Sbjct: 444 HAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPN 503
Query: 185 QATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIK 244
T+ ++ + + A +L +M + E Y+ +++ + G L A +
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDM-QNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVF 562
Query: 245 DEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRE 304
EM +K D +Y L++ KAG E+A + + M G N TCN ++ + R
Sbjct: 563 TEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 305 NNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGK 339
N EAY +L + G++P + Y + L C +G+
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGR 658
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 133/298 (44%), Gaps = 5/298 (1%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEM 176
++ T++ L +QF A+ +L G P+ TYN LI + + + A +F++M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
+ G +PD+ T+ TLI + L A ++ + M + L Y+ +I + K G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QAGGLSPDTFTYSVIINCLGKAGH 484
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
L A ++ EMV +G + YN +++ KA + AL++ +M+ G E + VT ++
Sbjct: 485 LPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSI 544
Query: 297 MIGEYCRENNFEEAYRILDGVEGVK--PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
++ EEA + ++ PD Y + + K G +A + M G
Sbjct: 545 VMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAG 604
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFEL 412
P+V T +L R + EA +L M+ G P + +S C +G +L
Sbjct: 605 LRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTDGRSKL 661
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 98.2 bits (243), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 135/315 (42%), Gaps = 39/315 (12%)
Query: 118 SFNTLLHALLTCRQFD-AVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEM 176
S + +++ L+ + D AVT L P YN +I C G ++ + +L EM
Sbjct: 441 SLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEM 500
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
+ GV P Q T + L E A +L ++M R + E + T L+K +C+ G
Sbjct: 501 KDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKM-RFYGFEPWIKHTTFLVKKLCENGR 559
Query: 237 LSWAFR------------------------IKDEMVKKGLKL-----------DAALYNT 261
A + IK+E V +GL+L D Y+
Sbjct: 560 AVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHV 619
Query: 262 LINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYR-ILDGVEGV 320
LI AL KA + EA + EM G + T N MI +C+E + I+ E
Sbjct: 620 LIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDE 679
Query: 321 K-PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAV 379
K PDVI Y + LC G+ SEA+ +++M + C P+ +T+ L GLC+ EA+
Sbjct: 680 KNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEAL 739
Query: 380 VVLDEMMFKGYAPLS 394
V EM K P S
Sbjct: 740 VYFREMEEKEMEPDS 754
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 86/376 (22%), Positives = 148/376 (39%), Gaps = 58/376 (15%)
Query: 130 RQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFG 189
R E+ +R G D IL+ + C G D+AFEL + + R +R + T+
Sbjct: 232 RALSVFNEILSR----GWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYC 287
Query: 190 TLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVK 249
LIH + SR+ +AF+L E+M R + + +Y LI G+CK +L A + E+ +
Sbjct: 288 VLIHGFVKESRIDKAFQLFEKM-RRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKR 346
Query: 250 KGLKLDAA---------------------------------LYNTLINALFKAGKKEEAL 276
G+ D LY +L + EA
Sbjct: 347 SGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAY 406
Query: 277 RVLEEM-----REGGCEW-------------NSVTCNVMIGEYCRENNFEEAYRILDGV- 317
++ + +G E +S + +++I + N + A +L +
Sbjct: 407 SFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIV 466
Query: 318 -EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFR 376
G+ P + YN + +CKEG+ E++ L +M G P T ++ L F
Sbjct: 467 QNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFV 526
Query: 377 EAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVL 436
A+ +L +M F G+ P K+ V +LC+ G L D+ +G + + +
Sbjct: 527 GALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAI 586
Query: 437 SMVCKPEKVPESFELL 452
+ K E V EL
Sbjct: 587 DGLIKNEGVDRGLELF 602
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 168/391 (42%), Gaps = 34/391 (8%)
Query: 89 TFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-- 146
+ +RARQ + + + + RC + +F + L D + + R E G
Sbjct: 114 SILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIRCLGNAGLVDEASSVFDRVREMGLC 173
Query: 147 APDACTYNILIRASCLRGHADRAFELFD----EMRSRGVRPDQATFGTLIHRLCENSRLR 202
P+A TYN L+ A + + EL + EMR G D+ T ++ C +
Sbjct: 174 VPNAYTYNCLLEA--ISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSE 231
Query: 203 EAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTL 262
A + E+ L+ ++ T L+ CK G++ AF + + + ++ ++L+ Y L
Sbjct: 232 RALSVFNEILSRGWLDEHIS--TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVL 289
Query: 263 INALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GV 320
I+ K + ++A ++ E+MR G + +V+IG C+ + E A + ++ G+
Sbjct: 290 IHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGI 349
Query: 321 KPDVIGYNVFLGWLCKEGKWSEAMD-LFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAV 379
PD L +E + S + + D+ ++ ++ Y++LF+G R EA
Sbjct: 350 PPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSV---MLLYKSLFEGFIRNDLVHEAY 406
Query: 380 VVLDEMMF------------------KGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLT 421
+ +M K P S +L+ ++ L + ++ T+L D+
Sbjct: 407 SFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIV 466
Query: 422 SKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
G I +++ ++ +CK + ES +LL
Sbjct: 467 QNGLIPGPMMYNNIIEGMCKEGRSEESLKLL 497
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/425 (19%), Positives = 158/425 (37%), Gaps = 88/425 (20%)
Query: 75 TRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDA 134
+R + E + ++ + + Q +A + + + K++ L+H + + D
Sbjct: 242 SRGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDK 301
Query: 135 VTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIH 193
+L + G D Y++LI C + A L+ E++ G+ PD+ G L+
Sbjct: 302 AFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLC 361
Query: 194 RLCENSRL---------------------------------REAFELKEEMFREFKLEGC 220
E S L EA+ + + ++ +G
Sbjct: 362 SFSEESELSRITEVIIGDIDKKSVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGV 421
Query: 221 VTIYTNL-----------------IKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLI 263
I L I + K ++ A + ++V+ GL +YN +I
Sbjct: 422 SEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNII 481
Query: 264 NALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVK 321
+ K G+ EE+L++L EM++ G E + T N + G +F A +L + G +
Sbjct: 482 EGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFE 541
Query: 322 PDVIGYNVFLGWLCKEGKWSEA-----------------------------------MDL 346
P + + LC+ G+ +A ++L
Sbjct: 542 PWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLEL 601
Query: 347 FHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQ 406
F D+ G PDV+ Y L LC+ + EA ++ +EM+ KG P N+ + C+
Sbjct: 602 FRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCK 661
Query: 407 EGNFE 411
EG +
Sbjct: 662 EGEID 666
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 80/188 (42%), Gaps = 12/188 (6%)
Query: 118 SFNTLLHALL-TCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEM 176
+++ L+ AL CR +A + P TYN +I C G DR M
Sbjct: 616 AYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRM 675
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFR--EFKLEGCV---TIYTNLIKGV 231
PD T+ +LIH LC + R EA +FR E K + C + LI+G+
Sbjct: 676 YEDEKNPDVITYTSLIHGLCASGRPSEA------IFRWNEMKGKDCYPNRITFMALIQGL 729
Query: 232 CKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNS 291
CK G A EM +K ++ D+A+Y +L+++ + + EM G S
Sbjct: 730 CKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVS 789
Query: 292 VTCNVMIG 299
V N M+
Sbjct: 790 VDRNYMLA 797
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 166/387 (42%), Gaps = 21/387 (5%)
Query: 86 HVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEF 145
H++ A+ T S+ S C+ T+ + NT+L A L ++ A+ +L +
Sbjct: 101 HILKLIRENDLEEAALYTRHSVYS-NCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQA 159
Query: 146 G-APDACTYNILIRASCLRGHADRAFELFDE-MRSRGVRPDQATFGTLIHRLCENSRLRE 203
G AP+ TYN++ +A + A E + + + + P ATF L+ L N L +
Sbjct: 160 GIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEK 219
Query: 204 AFELKEEMFREFKLEGCVT---IYTNLIKGVCKIGELSWAFRIKDEMVKK--GLKLDAAL 258
A E+KE+M ++G V +Y+ L+ G K + ++ E+ +K G D +
Sbjct: 220 AMEIKEDM----AVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVV 275
Query: 259 YNTLINALFKAGKKEEALRVLEEM--REGGCEWNSVTCNVMIGEYCRENNFEEAYRILDG 316
Y L+ F ++EA+ EE +++ N ++ F+EA ++ D
Sbjct: 276 YGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDA 335
Query: 317 VEG-------VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGL 369
V+ + ++ +NV + C GK+ EAM++F M C+PD +++ L + L
Sbjct: 336 VKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQL 395
Query: 370 CRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNE 429
C EA + EM K P + +EG + + + N
Sbjct: 396 CDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNL 455
Query: 430 GIWDVVLSMVCKPEKVPESFELLDALV 456
+++ + + K K+ ++ D +V
Sbjct: 456 AVYNRLQDQLIKAGKLDDAKSFFDMMV 482
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 150/378 (39%), Gaps = 52/378 (13%)
Query: 86 HVITF------YARARQPSRAVQTF-LSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTEL 138
++IT+ Y R+P A++ + L I + ++ +F L+ L++ + E+
Sbjct: 164 NIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEI 223
Query: 139 AARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRSR--GVRPDQATFGTLIHRL 195
G D Y+ L+ AD +L+ E++ + G D +G L+
Sbjct: 224 KEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGY 283
Query: 196 CENSRLREAFELKEEMFRE-FKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVK----- 249
+EA E EE E K+ Y +++ + + G+ A ++ D + K
Sbjct: 284 FMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPP 343
Query: 250 KGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEE 309
+ L ++ +N ++N GK EEA+ V +M + C ++++ N ++ + C E
Sbjct: 344 RHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAE 403
Query: 310 AYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFD 367
A ++ +E VKPD Y + + KEGK E + M P++ Y L D
Sbjct: 404 AEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQD 463
Query: 368 GLCRWRQFREA----------------------------------VVVLDEMMFKGYAPL 393
L + + +A + ++DEM+ +
Sbjct: 464 QLIKAGKLDDAKSFFDMMVSKLKMDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDDTVRV 523
Query: 394 SKNLNAFVSELCQEGNFE 411
S+ L FV E ++G E
Sbjct: 524 SEELQEFVKEELRKGGRE 541
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 111/256 (43%), Gaps = 3/256 (1%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
D TY ++ +L DEM G +P+ T+ LIH + L+EA +
Sbjct: 358 DGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVF 417
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
+M +E E Y LI K G L A + M + GL D Y+ +IN L K
Sbjct: 418 NQM-QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGK 476
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIG 326
AG A R+ EM GC N VT N+MI + + N+E A ++ ++ G +PD +
Sbjct: 477 AGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVT 536
Query: 327 YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMM 386
Y++ + L G EA +F +M R+ PD Y L D + +A M+
Sbjct: 537 YSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAML 596
Query: 387 FKGYAPLSKNLNAFVS 402
G P N+ +S
Sbjct: 597 QAGLRPNVPTCNSLLS 612
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 119/246 (48%), Gaps = 4/246 (1%)
Query: 215 FKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEE 274
FK +G YT ++ + + + ++ DEMV+ G K + YN LI++ +A +E
Sbjct: 355 FKHDG--HTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKE 412
Query: 275 ALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLG 332
A+ V +M+E GCE + VT +I + + + A + ++ G+ PD Y+V +
Sbjct: 413 AMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIIN 472
Query: 333 WLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
L K G A LF +M +GC P++VT+ + + R + A+ + +M G+ P
Sbjct: 473 CLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQP 532
Query: 393 LSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+ + L G E V +++ K + +E ++ +++ + K V ++++
Sbjct: 533 DKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWY 592
Query: 453 DALVLA 458
A++ A
Sbjct: 593 QAMLQA 598
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 129/296 (43%), Gaps = 9/296 (3%)
Query: 41 FRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLD--TRHRVPEPLLCHVITFYARARQPS 98
F+H +Y ++ LGRAK E+ ++L ++ D + V L H Y RA
Sbjct: 355 FKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHS---YGRANYLK 411
Query: 99 RAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILI 157
A+ F + C+ ++ TL+ D ++ R E G +PD TY+++I
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 158 RASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKL 217
GH A LF EM +G P+ TF +I + A +L +M +
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDM-QNAGF 530
Query: 218 EGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALR 277
+ Y+ +++ + G L A + EM +K D +Y L++ KAG ++A +
Sbjct: 531 QPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQ 590
Query: 278 VLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFL 331
+ M + G N TCN ++ + R + EAY +L + G+ P + Y + L
Sbjct: 591 WYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 92/193 (47%), Gaps = 2/193 (1%)
Query: 249 KKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFE 308
+ G K D Y T++ L +A + E ++L+EM GC+ N+VT N +I Y R N +
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 309 EAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLF 366
EA + + ++ G +PD + Y + K G AMD++ M G +PD TY +
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 367 DGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKI 426
+ L + A + EM+ +G P N ++ + N+E + D+ + G
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 427 CNEGIWDVVLSMV 439
++ + +V+ ++
Sbjct: 532 PDKVTYSIVMEVL 544
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 93/215 (43%), Gaps = 4/215 (1%)
Query: 239 WAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMI 298
W ++ + G ++DA N ++ + L+ R+ G + + T M+
Sbjct: 309 WGHAAEEALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLK--RQPGFKHDGHTYTTMV 366
Query: 299 GEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCA 356
G R F E ++LD + +G KP+ + YN + + EAM++F+ M GC
Sbjct: 367 GNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCE 426
Query: 357 PDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTV 416
PD VTY TL D + A+ + M G +P + + ++ L + G+ +
Sbjct: 427 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRL 486
Query: 417 LSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFEL 451
++ +G N +++++++ K + +L
Sbjct: 487 FCEMVGQGCTPNLVTFNIMIALHAKARNYETALKL 521
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 125/301 (41%), Gaps = 9/301 (2%)
Query: 83 LLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARA 142
LLC + F + V+ I FR + + FN LL A T R+ + +
Sbjct: 145 LLCKIAKFGSYEETLEAFVKMEKEI--FRKKFGVDEFNILLRAFCTEREMKEARSIFEKL 202
Query: 143 GEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLR 202
PD T NIL+ G + EM RG +P+ T+G I C+
Sbjct: 203 HSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFG 262
Query: 203 EAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTL 262
EA L E+M R + V I T LI G A ++ DE+ K+GL D YN L
Sbjct: 263 EALRLFEDMDR-LDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNAL 321
Query: 263 INALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFE-----EAYRILDGV 317
+++L K G A++V++EM E G E +SVT + M + F E Y+ +
Sbjct: 322 MSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKE- 380
Query: 318 EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFRE 377
+ P + + C G+ + +DL+ M +G P L LC R+ +
Sbjct: 381 RSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRAND 440
Query: 378 A 378
A
Sbjct: 441 A 441
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/331 (22%), Positives = 125/331 (37%), Gaps = 47/331 (14%)
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFGAPDACTY---NILIRASCLRGHADRAFELFDE 175
F LH L R FD L A + P+ ++ +IL+ G + E F +
Sbjct: 106 FEKTLHILARMRYFDQAWALMAEVRK-DYPNLLSFKSMSILLCKIAKFGSYEETLEAFVK 164
Query: 176 MRSRGVRPDQAT--FGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCK 233
M R F L+ C ++EA + E++ F + V L+ G +
Sbjct: 165 MEKEIFRKKFGVDEFNILLRAFCTEREMKEARSIFEKLHSRFNPD--VKTMNILLLGFKE 222
Query: 234 IGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
G+++ EMVK+G K ++ Y I+ K EALR+ E+M +
Sbjct: 223 AGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQI 282
Query: 294 CNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
+I N +A ++ D + G+ PD YN + L K G S A+ + +M
Sbjct: 283 LTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEME 342
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQF-------------------REAVVVL---------- 382
+G PD VT+ ++F G+ + ++F + +V+
Sbjct: 343 EKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGE 402
Query: 383 --------DEMMFKGYAPLSKNLNAFVSELC 405
M+ KGY P L + LC
Sbjct: 403 VNLGLDLWKYMLEKGYCPHGHALELLTTALC 433
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 120/269 (44%), Gaps = 21/269 (7%)
Query: 152 TYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLR------EAF 205
T +IL R + D+A+ L E+R P+ +F ++ LC+ ++ EAF
Sbjct: 109 TLHILARMR----YFDQAWALMAEVRKD--YPNLLSFKSMSILLCKIAKFGSYEETLEAF 162
Query: 206 -ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLIN 264
++++E+FR+ + V + L++ C E+ A I +++ + D N L+
Sbjct: 163 VKMEKEIFRK---KFGVDEFNILLRAFCTEREMKEARSIFEKLHSR-FNPDVKTMNILLL 218
Query: 265 ALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDV 324
+AG EM + G + NSVT + I +C++ NF EA R+ + ++ + D+
Sbjct: 219 GFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDI 278
Query: 325 ---IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVV 381
I + G K +A LF ++ +RG PD Y L L + A+ V
Sbjct: 279 TVQILTTLIHGSGVARNKI-KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKV 337
Query: 382 LDEMMFKGYAPLSKNLNAFVSELCQEGNF 410
+ EM KG P S ++ + + F
Sbjct: 338 MKEMEEKGIEPDSVTFHSMFIGMMKSKEF 366
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%)
Query: 319 GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREA 378
G KP+ + Y + + CK+ + EA+ LF DM R V TL G R +A
Sbjct: 240 GFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKA 299
Query: 379 VVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
+ DE+ +G P NA +S L + G+ V+ ++ KG
Sbjct: 300 RQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKG 345
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 17/282 (6%)
Query: 153 YNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMF 212
YN++I+A + ++A ELF+ M S GV PD+ T+ TL+ L + E+M
Sbjct: 508 YNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMR 567
Query: 213 REFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKK 272
+ C+ Y +I K+G+L+ A + EMV+ ++ D +Y LINA G
Sbjct: 568 ETGYVSDCIP-YCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNV 626
Query: 273 EEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA---YR-ILDGVEGVK-PDVIGY 327
++A+ +E M+E G NSV N +I Y + +EA YR +L + PDV
Sbjct: 627 QQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTS 686
Query: 328 NVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQ---FREAVVVLDE 384
N + + +A +F M +RG A + T LC +++ F EA + +
Sbjct: 687 NCMINLYSERSMVRKAEAIFDSMKQRGEANEF----TFAMMLCMYKKNGRFEEATQIAKQ 742
Query: 385 M--MFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
M M PLS N+ + +G F+ ++ S G
Sbjct: 743 MREMKILTDPLS--YNSVLGLFALDGRFKEAVETFKEMVSSG 782
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 145/333 (43%), Gaps = 46/333 (13%)
Query: 113 QRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIR------------- 158
+RT+ +N ++ A + + EL +G PD CTYN L++
Sbjct: 502 KRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRC 561
Query: 159 -----------ASCL-----------RGHADRAFELFDEMRSRGVRPDQATFGTLIHRLC 196
+ C+ G + A E++ EM + PD +G LI+
Sbjct: 562 YLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFA 621
Query: 197 ENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKL-- 254
+ +++A E M +E + G IY +LIK K+G L A I ++++ K
Sbjct: 622 DTGNVQQAMSYVEAM-KEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQY 680
Query: 255 -DAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRI 313
D N +IN + +A + + M++ G E N T +M+ Y + FEEA +I
Sbjct: 681 PDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQI 739
Query: 314 LDGVEGVK--PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCR 371
+ +K D + YN LG +G++ EA++ F +M G PD T+++L L +
Sbjct: 740 AKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMK 799
Query: 372 WRQFREAVVVLDEMMFKGYAPLSKNLNAFVSEL 404
++AV ++E+ K + + L ++S L
Sbjct: 800 LGMSKKAVRKIEEIRKK---EIKRGLELWISTL 829
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 138/367 (37%), Gaps = 25/367 (6%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
+I Y ++ Q A +TF + T +FNT++H Q VT L
Sbjct: 304 MIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHC 363
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
APD TYNILI +RA F EM+ G++PD ++ TL++ + EA
Sbjct: 364 APDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEG 423
Query: 207 LKEEM------FREFKLEGCVTIYTNLIKGVCKIGELSWA----FRIKDEMVKKGLKLDA 256
L EM E+ +Y ++ E SW+ F + M +G
Sbjct: 424 LIAEMDDDNVEIDEYTQSALTRMYVE-----AEMLEKSWSWFKRFHVAGNMSSEG----- 473
Query: 257 ALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDG 316
Y+ I+A + G EA RV +E + + NVMI Y + E+A + +
Sbjct: 474 --YSANIDAYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAYGISKSCEKACELFES 530
Query: 317 V--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQ 374
+ GV PD YN + L + M G D + Y + + Q
Sbjct: 531 MMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQ 590
Query: 375 FREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDV 434
A V EM+ P ++ GN + + + + G N I++
Sbjct: 591 LNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNS 650
Query: 435 VLSMVCK 441
++ + K
Sbjct: 651 LIKLYTK 657
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 97/244 (39%), Gaps = 16/244 (6%)
Query: 153 YNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLI----------HRLCENSRLR 202
YNI++R L+DEM +G++P +T+GTLI H LC ++
Sbjct: 190 YNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALCWLGKMS 249
Query: 203 EAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTL 262
+ +E+ G V + K E + + + L + YNT+
Sbjct: 250 KIGMQPDEV-----TTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNTM 304
Query: 263 INALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE-GVK 321
I+ K+G+ +EA + M E G +VT N MI Y E ++ ++
Sbjct: 305 IDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCA 364
Query: 322 PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVV 381
PD YN+ + K A F +M G PD V+YRTL EA +
Sbjct: 365 PDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGL 424
Query: 382 LDEM 385
+ EM
Sbjct: 425 IAEM 428
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 117/339 (34%), Gaps = 37/339 (10%)
Query: 152 TYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM 211
TYN +I G A E F M G+ P TF T+IH N +L E L + M
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM 359
Query: 212 FREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGK 271
+ Y LI K ++ A EM GLK D Y TL+ A
Sbjct: 360 --KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHM 417
Query: 272 KEEALRVLEEMREGGCEWNSVTCNVM---------------------------------- 297
EEA ++ EM + E + T + +
Sbjct: 418 VEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSAN 477
Query: 298 IGEYCRENNFEEAYRILDGVEGV-KPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCA 356
I Y EA R+ + V K VI YNV + +A +LF M G
Sbjct: 478 IDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVT 537
Query: 357 PDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTV 416
PD TY TL L + L++M GY A +S + G + V
Sbjct: 538 PDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEV 597
Query: 417 LSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
++ + ++ V+++ V ++ ++A+
Sbjct: 598 YKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAM 636
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 13/227 (5%)
Query: 210 EMFREFKLEGC----VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
E+F FK +GC V Y +++ + K + + + DEM++KG+K + Y TLI+
Sbjct: 172 EIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDV 231
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILD--GVEGVKPD 323
K G K AL L +M + G + + VT +++ Y + F++A + K D
Sbjct: 232 YSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKAD 291
Query: 324 ------VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFRE 377
YN + K G+ EA + F M G P VT+ T+ Q E
Sbjct: 292 SHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGE 351
Query: 378 AVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
++ M AP ++ N +S + + E ++ G
Sbjct: 352 VTSLMKTMKLHC-APDTRTYNILISLHTKNNDIERAGAYFKEMKDDG 397
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 150/358 (41%), Gaps = 19/358 (5%)
Query: 79 VPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCR---QFDA- 134
V P+ +++F + P + ++PS T S++ L++ + R ++D+
Sbjct: 106 VLSPIAQKILSFIQKETDPDKVADVLGALPS-----THASWDDLINVSVQLRLNKKWDSI 160
Query: 135 --VTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLI 192
V E R F PD +N+LI A + A L+ ++ P + T+ LI
Sbjct: 161 ILVCEWILRKSSF-QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLI 219
Query: 193 HRLCENSRLREAFELKEEMFREF---KLEGCVTIYTNLIKGVCK-IGELSWAFRIKDEMV 248
C + A + EM K G VT+Y I+G+ K G A + M
Sbjct: 220 KAYCMAGLIERAEVVLVEMQNHHVSPKTIG-VTVYNAYIEGLMKRKGNTEEAIDVFQRMK 278
Query: 249 KKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFE 308
+ K YN +IN KA K + ++ EMR C+ N T ++ + RE E
Sbjct: 279 RDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCE 338
Query: 309 EAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLF 366
+A I + ++ G++PDV YN + + G A ++F M GC PD +Y +
Sbjct: 339 KAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMV 398
Query: 367 DGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
D R +A V +EM G AP K+ +S + + ++ +++ G
Sbjct: 399 DAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG 456
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 164/386 (42%), Gaps = 25/386 (6%)
Query: 47 SYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFY-----ARARQPSRAV 101
+Y L+I A ++ E VL + + H P+ + V Y R A+
Sbjct: 214 TYALLIKAYCMAGLIERAEVVL--VEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAI 271
Query: 102 QTFLSIPSFRCQRTLKSFNTLLH----ALLTCRQFDAVTELAARAGEFGAPDACTYNILI 157
F + RC+ T +++N +++ A + + E+ + + P+ CTY L+
Sbjct: 272 DVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCK---PNICTYTALV 328
Query: 158 RASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL-KEEMFREFK 216
A G ++A E+F++++ G+ PD + L+ S R + E+F +
Sbjct: 329 NAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALME-----SYSRAGYPYGAAEIFSLMQ 383
Query: 217 LEGCV---TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKE 273
GC Y ++ + G S A + +EM + G+ + L++A KA
Sbjct: 384 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 443
Query: 274 EALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VKPDVIGYNVFL 331
+ +++EM E G E ++ N M+ Y R F + +IL +E D+ YN+ +
Sbjct: 444 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILI 503
Query: 332 GWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYA 391
K G +LF ++ + PDVVT+ + R + + + + V +EM+ G A
Sbjct: 504 NIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCA 563
Query: 392 PLSKNLNAFVSELCQEGNFELLSTVL 417
P +S E E +++VL
Sbjct: 564 PDGGTAKVLLSACSSEEQVEQVTSVL 589
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 135/302 (44%), Gaps = 4/302 (1%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
+I Y +A + + + + + S +C+ + ++ L++A + E+ + E G
Sbjct: 292 MINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 351
Query: 147 -APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
PD YN L+ + G+ A E+F M+ G PD+A++ ++ +A
Sbjct: 352 LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 411
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
+ EEM R + + + L+ K +++ I EM + G++ D + N+++N
Sbjct: 412 AVFEEMKR-LGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 470
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPD 323
+ G+ + ++L EM G C + T N++I Y + E + ++ +PD
Sbjct: 471 YGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPD 530
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
V+ + +G ++ + + +++F +M GCAPD T + L Q + VL
Sbjct: 531 VVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLR 590
Query: 384 EM 385
M
Sbjct: 591 TM 592
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 151/342 (44%), Gaps = 13/342 (3%)
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMR 177
FN L+ A Q+ L + E P TY +LI+A C+ G +RA + EM+
Sbjct: 180 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 239
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKE--EMFREFKLEGC---VTIYTNLIKGVC 232
+ V P T G ++ ++ +E ++F+ K + C Y +I
Sbjct: 240 NHHVSPK--TIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYG 297
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
K + ++++ EM K + Y L+NA + G E+A + E+++E G E +
Sbjct: 298 KASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVY 357
Query: 293 TCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM 350
N ++ Y R A I ++ G +PD YN+ + + G S+A +F +M
Sbjct: 358 VYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM 417
Query: 351 PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNF 410
R G AP + ++ L + R + ++ EM G P + LN+ ++ + G F
Sbjct: 418 KRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQF 477
Query: 411 ELLSTVLSDLTSKGKICNEGIWDVVLSMVCKP---EKVPESF 449
+ +L+++ + + +++++++ K E++ E F
Sbjct: 478 TKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELF 519
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 150/358 (41%), Gaps = 19/358 (5%)
Query: 79 VPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCR---QFDA- 134
V P+ +++F + P + ++PS T S++ L++ + R ++D+
Sbjct: 84 VLSPIAQKILSFIQKETDPDKVADVLGALPS-----THASWDDLINVSVQLRLNKKWDSI 138
Query: 135 --VTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLI 192
V E R F PD +N+LI A + A L+ ++ P + T+ LI
Sbjct: 139 ILVCEWILRKSSF-QPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLI 197
Query: 193 HRLCENSRLREAFELKEEMFREF---KLEGCVTIYTNLIKGVCK-IGELSWAFRIKDEMV 248
C + A + EM K G VT+Y I+G+ K G A + M
Sbjct: 198 KAYCMAGLIERAEVVLVEMQNHHVSPKTIG-VTVYNAYIEGLMKRKGNTEEAIDVFQRMK 256
Query: 249 KKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFE 308
+ K YN +IN KA K + ++ EMR C+ N T ++ + RE E
Sbjct: 257 RDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCE 316
Query: 309 EAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLF 366
+A I + ++ G++PDV YN + + G A ++F M GC PD +Y +
Sbjct: 317 KAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMV 376
Query: 367 DGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
D R +A V +EM G AP K+ +S + + ++ +++ G
Sbjct: 377 DAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENG 434
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 164/386 (42%), Gaps = 25/386 (6%)
Query: 47 SYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFY-----ARARQPSRAV 101
+Y L+I A ++ E VL + + H P+ + V Y R A+
Sbjct: 192 TYALLIKAYCMAGLIERAEVVL--VEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAI 249
Query: 102 QTFLSIPSFRCQRTLKSFNTLLH----ALLTCRQFDAVTELAARAGEFGAPDACTYNILI 157
F + RC+ T +++N +++ A + + E+ + + P+ CTY L+
Sbjct: 250 DVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCK---PNICTYTALV 306
Query: 158 RASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL-KEEMFREFK 216
A G ++A E+F++++ G+ PD + L+ S R + E+F +
Sbjct: 307 NAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALME-----SYSRAGYPYGAAEIFSLMQ 361
Query: 217 LEGCV---TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKE 273
GC Y ++ + G S A + +EM + G+ + L++A KA
Sbjct: 362 HMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVT 421
Query: 274 EALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VKPDVIGYNVFL 331
+ +++EM E G E ++ N M+ Y R F + +IL +E D+ YN+ +
Sbjct: 422 KCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILI 481
Query: 332 GWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYA 391
K G +LF ++ + PDVVT+ + R + + + + V +EM+ G A
Sbjct: 482 NIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCA 541
Query: 392 PLSKNLNAFVSELCQEGNFELLSTVL 417
P +S E E +++VL
Sbjct: 542 PDGGTAKVLLSACSSEEQVEQVTSVL 567
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 135/302 (44%), Gaps = 4/302 (1%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
+I Y +A + + + + + S +C+ + ++ L++A + E+ + E G
Sbjct: 270 MINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDG 329
Query: 147 -APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
PD YN L+ + G+ A E+F M+ G PD+A++ ++ +A
Sbjct: 330 LEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAE 389
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
+ EEM R + + + L+ K +++ I EM + G++ D + N+++N
Sbjct: 390 AVFEEMKR-LGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNL 448
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPD 323
+ G+ + ++L EM G C + T N++I Y + E + ++ +PD
Sbjct: 449 YGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPD 508
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
V+ + +G ++ + + +++F +M GCAPD T + L Q + VL
Sbjct: 509 VVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLR 568
Query: 384 EM 385
M
Sbjct: 569 TM 570
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/342 (22%), Positives = 151/342 (44%), Gaps = 13/342 (3%)
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMR 177
FN L+ A Q+ L + E P TY +LI+A C+ G +RA + EM+
Sbjct: 158 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 217
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKE--EMFREFKLEGC---VTIYTNLIKGVC 232
+ V P T G ++ ++ +E ++F+ K + C Y +I
Sbjct: 218 NHHVSPK--TIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYG 275
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
K + ++++ EM K + Y L+NA + G E+A + E+++E G E +
Sbjct: 276 KASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVY 335
Query: 293 TCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM 350
N ++ Y R A I ++ G +PD YN+ + + G S+A +F +M
Sbjct: 336 VYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEM 395
Query: 351 PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNF 410
R G AP + ++ L + R + ++ EM G P + LN+ ++ + G F
Sbjct: 396 KRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQF 455
Query: 411 ELLSTVLSDLTSKGKICNEGIWDVVLSMVCKP---EKVPESF 449
+ +L+++ + + +++++++ K E++ E F
Sbjct: 456 TKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELF 497
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 140/311 (45%), Gaps = 17/311 (5%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFD-AVTELAARAGEF 145
+++ + R+ +P +AV F + C L ++ +L+ + D A T L+ E
Sbjct: 253 LVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEG 312
Query: 146 GAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
APD N++I G + A ++F + R + PDQ TF +++ LC + +
Sbjct: 313 LAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVP 372
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKG-VCKIGELSWAFRIKDEMVKKGLKLDAALYNTLIN 264
+ + +F L + NL+ KIG S+A ++ M K LD Y ++
Sbjct: 373 RITHGIGTDFDL-----VTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLS 427
Query: 265 ALFKAGKKEEALR----VLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYR--ILDGVE 318
AL + G A++ +++E + ++S + +I E + N ++ IL E
Sbjct: 428 ALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLI-ELGKYNTAVHLFKRCIL---E 483
Query: 319 GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREA 378
DV+ Y V + L + + EA L DM G P+ TYRT+ GLC+ ++ +
Sbjct: 484 KYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKV 543
Query: 379 VVVLDEMMFKG 389
+L E + +G
Sbjct: 544 RKILRECIQEG 554
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 165/415 (39%), Gaps = 21/415 (5%)
Query: 2 ATPKPISPFRLSSLLRSQKDPSVAFQLFLNPNPQTNH----RPFRHSLLSYDLIITKLGR 57
KP++ + S LR F Q N+ R F H + ++ KL R
Sbjct: 32 TAAKPLTHDNVYSCLRESPADLKTLNFFFWCAKQNNYFHDDRAFDHMVG----VVEKLTR 87
Query: 58 AKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLK 117
+++++ +L + P L + F+ R +A++ + + SF +
Sbjct: 88 EYY--SIDRIIERLKISGCEIKPRVFLLLLEIFW-RGHIYDKAIEVYTGMSSFGFVPNTR 144
Query: 118 SFNTLLHALLTCRQFDAVTEL--AARAGEFGAPDACTYNILIRASCLRGHADRAFELFDE 175
+ N ++ + E+ R F + D + R RG +
Sbjct: 145 AMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDIALSHFCSRGG--RGDLVGVKIVLKR 202
Query: 176 MRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIG 235
M G P++ FG ++ C + EAF++ M + V +++ L+ G + G
Sbjct: 203 MIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICS-GISVSVNVWSMLVSGFFRSG 261
Query: 236 ELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCN 295
E A + ++M++ G + Y +LI G +EA VL +++ G + V CN
Sbjct: 262 EPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCN 321
Query: 296 VMIGEYCRENNFEEAYRILDGVEGVK--PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR 353
+MI Y R FEEA ++ +E K PD + L LC GK+ + H +
Sbjct: 322 LMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI--- 378
Query: 354 GCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEG 408
G D+VT L + + A+ VL M +K +A ++S LC+ G
Sbjct: 379 GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGG 433
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 133/315 (42%), Gaps = 13/315 (4%)
Query: 12 LSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQL 71
+S RS +P A LF N Q P +L++Y +I M+ E VL ++
Sbjct: 254 VSGFFRSG-EPQKAVDLF-NKMIQIGCSP---NLVTYTSLIKGFVDLGMVDEAFTVLSKV 308
Query: 72 HLDTRHRVPEPLLCHV-ITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCR 130
+ P+ +LC++ I Y R + A + F S+ + +F ++L +L
Sbjct: 309 Q--SEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSG 366
Query: 131 QFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGT 190
+FD V + G D T N+L G+ A ++ M + D T+
Sbjct: 367 KFDLVPRITHGIGT--DFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTV 424
Query: 191 LIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKK 250
+ LC R A ++ + + +E K ++ +I + ++G+ + A + + +
Sbjct: 425 YLSALCRGGAPRAAIKMYKIIIKE-KKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILE 483
Query: 251 GLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA 310
LD Y I L +A + EEA + +M+EGG N T +I C+E E+
Sbjct: 484 KYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKV 543
Query: 311 YRILDGV--EGVKPD 323
+IL EGV+ D
Sbjct: 544 RKILRECIQEGVELD 558
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 129/355 (36%), Gaps = 78/355 (21%)
Query: 143 GEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLR 202
GE P+ + ++R C G AF++ M G+ + L+ + +
Sbjct: 205 GEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQ 264
Query: 203 EAFELKEEMFREFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALY 259
+A +L +M + GC + YT+LIKG +G + AF + ++ +GL D L
Sbjct: 265 KAVDLFNKMIQI----GCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLC 320
Query: 260 NTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG 319
N +I+ + G+ EEA +V + + + T ++ C F+ RI G+ G
Sbjct: 321 NLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHGI-G 379
Query: 320 VKPDV------------IGYN-----------------------VFLGWLCKE------- 337
D+ IGYN V+L LC+
Sbjct: 380 TDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAI 439
Query: 338 ----------------------------GKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGL 369
GK++ A+ LF DVV+Y GL
Sbjct: 440 KMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGL 499
Query: 370 CRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
R ++ EA + +M G P + +S LC+E E + +L + +G
Sbjct: 500 VRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEG 554
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 70/145 (48%), Gaps = 2/145 (1%)
Query: 302 CRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDV 359
CR EA++++ + G+ V +++ + + G+ +A+DLF+ M + GC+P++
Sbjct: 223 CRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNL 282
Query: 360 VTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSD 419
VTY +L G EA VL ++ +G AP N + + G FE V +
Sbjct: 283 VTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTS 342
Query: 420 LTSKGKICNEGIWDVVLSMVCKPEK 444
L + + ++ + +LS +C K
Sbjct: 343 LEKRKLVPDQYTFASILSSLCLSGK 367
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 147/382 (38%), Gaps = 42/382 (10%)
Query: 82 PLLCHVI-TFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAA 140
P C V+ T R R + ++P R ++ +N + L +++D E+
Sbjct: 238 PRACSVLFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYE 297
Query: 141 RAGEFGA-PDACTYNILIRASCLRGH-ADRAFELFDEMRSRGVRPDQATFGTLIHRLCEN 198
+ PD T ILI G A +E+F++M +GV+ Q FG L+ C+
Sbjct: 298 AMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDE 357
Query: 199 SRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAAL 258
EA ++ EM ++ + +Y L+ K + + EM KGLK AA
Sbjct: 358 GLKEEALVIQTEMEKK-GIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAAT 416
Query: 259 YNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNF----------- 307
YN L++A + + + +L EM + G E N + +I Y R
Sbjct: 417 YNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRM 476
Query: 308 -------------------------EEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKW 340
E+AY + + EG+KP V Y L + G
Sbjct: 477 KKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDT 536
Query: 341 SEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAF 400
+ M+++ M R +TY TL DG + + EA V+ E G P N
Sbjct: 537 GKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNML 596
Query: 401 VSELCQEGNFELLSTVLSDLTS 422
++ + G L +L ++ +
Sbjct: 597 MNAYARGGQDAKLPQLLKEMAA 618
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 135/314 (42%), Gaps = 12/314 (3%)
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMR 177
+NTL+ A + V L + G P A TYNIL+ A R D L EM
Sbjct: 382 YNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREME 441
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFK---LEGCVTIYTNLIKGVCKI 234
G+ P+ ++ LI R ++ ++ + F K L+ YT LI
Sbjct: 442 DLGLEPNVKSYTCLI---SAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVS 498
Query: 235 GELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTC 294
G A+ +EM K+G+K Y ++++A ++G + + + + M + +T
Sbjct: 499 GWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITY 558
Query: 295 NVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPR 352
N ++ + ++ + EA ++ G++P V+ YN+ + + G+ ++ L +M
Sbjct: 559 NTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAA 618
Query: 353 RGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN---LNAFVSELCQEGN 409
PD +TY T+ R R F+ A M+ G P ++ L A + + + N
Sbjct: 619 LNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAILEDKAKTKN 678
Query: 410 FELLSTVLSDLTSK 423
+ + +L + SK
Sbjct: 679 RKDKTAILGIINSK 692
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 128/276 (46%), Gaps = 6/276 (2%)
Query: 39 RPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPS 98
+ R + + Y+ ++ ++ + E+E + ++ D + ++ YAR QP
Sbjct: 373 KGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMR-DKGLKPSAATYNILMDAYARRMQPD 431
Query: 99 RAVQTFL-SIPSFRCQRTLKSFNTLLHAL-LTCRQFDAVTELAARAGEFG-APDACTYNI 155
V+T L + + +KS+ L+ A T + D + R + G P + +Y
Sbjct: 432 -IVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTA 490
Query: 156 LIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREF 215
LI A + G ++A+ F+EM G++P T+ +++ + + E+ + M RE
Sbjct: 491 LIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLRE- 549
Query: 216 KLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEA 275
K++G Y L+ G K G A + E K GL+ YN L+NA + G+ +
Sbjct: 550 KIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKL 609
Query: 276 LRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAY 311
++L+EM + +S+T + MI + R +F+ A+
Sbjct: 610 PQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAF 645
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 87/196 (44%), Gaps = 3/196 (1%)
Query: 255 DAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCREN-NFEEAYRI 313
D LYN I+ L + + ++A V E M + ++VTC ++I + + +E + I
Sbjct: 272 DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEI 331
Query: 314 LDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCR 371
+ + +GVK + + C EG EA+ + +M ++G + + Y TL D +
Sbjct: 332 FEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNK 391
Query: 372 WRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGI 431
E + EM KG P + N + + +++ T+L ++ G N
Sbjct: 392 SNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKS 451
Query: 432 WDVVLSMVCKPEKVPE 447
+ ++S + +K+ +
Sbjct: 452 YTCLISAYGRTKKMSD 467
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 141/325 (43%), Gaps = 37/325 (11%)
Query: 122 LLHALLTC-RQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRG 180
+LH+L C R+ DA L PD Y ++ A + G+ + + R G
Sbjct: 229 ILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLG 288
Query: 181 VRPDQATFGTLIHRLCENSRLREAFELKEEMFR-EFKLE--------GCVT--------- 222
V P + + I L RL EA E+ E + +F ++ G V+
Sbjct: 289 VAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVE 348
Query: 223 --IY-------------TNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+Y + L K +C+ + + + + KG + Y+ +I+ L
Sbjct: 349 FLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLC 408
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDG--VEGVKPDVI 325
KAG+ E+ L+EM++ G + N +I C+ A ++ D VEG K ++
Sbjct: 409 KAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEMFVEGCKMNLT 468
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
YNV + L +EG+ E++ LF M RG PD Y +L +GLC+ + A+ V +
Sbjct: 469 TYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKC 528
Query: 386 MFKGYAPLSKN-LNAFVSELCQEGN 409
M + + +++ L+ FV LC G+
Sbjct: 529 MERDHKTVTRRVLSEFVLNLCSNGH 553
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 163/435 (37%), Gaps = 80/435 (18%)
Query: 94 ARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDA---VTELAARAGEFGAPDA 150
+RQ S F + S + + +L+ L+ R+ + V E A G+ PD
Sbjct: 95 SRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDV 154
Query: 151 CTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEE 210
C N L+ G D A +LF +MR +GV + FG I C +S + L +E
Sbjct: 155 C--NRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDE 212
Query: 211 MFR-EFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEM---------------------- 247
+ + + G + I ++ +CK AF I +E+
Sbjct: 213 VKKANLNINGSI-IALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVT 271
Query: 248 ---------VKKGLKLDAAL----YNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTC 294
+KK KL A Y I L A + EA V E + G ++
Sbjct: 272 GNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDIL 331
Query: 295 NVMIGEY----------------------------------CRENNFE---EAYRILDGV 317
+ +IG CR + + +AY +L
Sbjct: 332 DALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSS- 390
Query: 318 EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFRE 377
+G ++ Y++ + +LCK G+ E+ +M + G APDV Y L + C+ R
Sbjct: 391 KGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRP 450
Query: 378 AVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLS 437
A + DEM +G N + +L +EG E + + +G +E I+ ++
Sbjct: 451 AKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIE 510
Query: 438 MVCKPEKVPESFELL 452
+CK K+ + E+
Sbjct: 511 GLCKETKIEAAMEVF 525
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 6/218 (2%)
Query: 193 HRLCENSRLREAFELKEEMFREFKLEGCV---TIYTNLIKGVCKIGELSWAFRIKDEMVK 249
H + ++ L F + +F++ K + ++Y +LI + + AF + +E
Sbjct: 86 HSIFKSLSLSRQFSAMDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFS 145
Query: 250 KGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEE 309
G ++ + N L+ L G + A ++ +MR G N++ V IG +CR + +
Sbjct: 146 TGQEIHPDVCNRLLAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQ 205
Query: 310 AYRILDGVEGVKPDVIGYNV---FLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLF 366
R++D V+ ++ G + L LCK + +A + ++ C PD + YR +
Sbjct: 206 LLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIA 265
Query: 367 DGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSEL 404
+ E VVL + G AP S + AF+ +L
Sbjct: 266 EAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDL 303
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 152 TYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL-KEE 210
TYN+LIR G A+ + LFD+M RG+ PD+ + +LI LC+ +++ A E+ ++
Sbjct: 469 TYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKC 528
Query: 211 MFREFKLEGCVT--IYTNLIKGVCK---IGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
M R+ K VT + + + +C GE S R ++ + G + L+
Sbjct: 529 MERDHK---TVTRRVLSEFVLNLCSNGHSGEASQLLREREHLEHTGAHV------VLLKC 579
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG 319
+ A + E +R ++ ++E + ++ +C ++ + + +E
Sbjct: 580 VADAKEVEIGIRHMQWIKEVSPSLVHTISSDLLASFCSSSDPDSILPFIRAIEN 633
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 180/445 (40%), Gaps = 23/445 (5%)
Query: 12 LSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQL 71
+ ++L K+P A Q + ++ R RH + SY L I L +A++L + ++
Sbjct: 80 IETILLRFKNPETAKQALSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDARALIESS 139
Query: 72 HLDT--------------RHRVPEPLLCHV-ITFYARARQPSRAVQTFLSIPSFRCQRTL 116
L++ PL+ + + YA+ R F + ++
Sbjct: 140 LLNSPPDSDLVDSLLDTYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSV 199
Query: 117 KSFNTLLHALLTCRQFDAVTELAARA-GEFGAPDACTYNILIRASCLRGHADRAFELFDE 175
+ NTL+H + D V + A + P+ T I+I+ C G +L D
Sbjct: 200 ITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDR 259
Query: 176 MRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIG 235
+ + P +L+ R+ E R+ E+ L + + + + + Y+ ++ K G
Sbjct: 260 ICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIG-YSIVVYAKAKEG 318
Query: 236 ELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCN 295
+L A ++ DEM+++G ++ +Y + + G +EA R+L EM E G T N
Sbjct: 319 DLVSARKVFDEMLQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFN 378
Query: 296 VMIGEYCR----ENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
+IG + R E E Y + G+ P +N + + K + A ++
Sbjct: 379 CLIGGFARFGWEEKGLE--YCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSI 436
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
+G PD TY L G +A+ + EM ++ +P + + + LC G E
Sbjct: 437 DKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVE 496
Query: 412 LLSTVLSDLTSKGKICNEGIWDVVL 436
L + + N I+D ++
Sbjct: 497 AGEKYLKIMKKRLIEPNADIYDALI 521
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 2/132 (1%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEM 176
+FN ++ ++ + E+ ++ + G PD TY+ LIR D+A +LF EM
Sbjct: 411 AFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALKLFYEM 470
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
R + P F +LI LC ++ EA E ++ ++ +E IY LIK KIG+
Sbjct: 471 EYRKMSPGFEVFRSLIVGLCTCGKV-EAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGD 529
Query: 237 LSWAFRIKDEMV 248
+ A R+ +EM+
Sbjct: 530 KTNADRVYNEMI 541
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/200 (19%), Positives = 85/200 (42%), Gaps = 2/200 (1%)
Query: 258 LYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV 317
+++ L+ K E V + + + G + +T N +I + + +RI +
Sbjct: 166 VFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECA 225
Query: 318 --EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQF 375
+ + P+ I + + LCKEG+ E +DL + + C P V+ +L + +
Sbjct: 226 IDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRI 285
Query: 376 REAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVV 435
E++ +L ++ K + + V +EG+ V ++ +G N ++ V
Sbjct: 286 EESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVF 345
Query: 436 LSMVCKPEKVPESFELLDAL 455
+ + C+ V E+ LL +
Sbjct: 346 VRVCCEKGDVKEAERLLSEM 365
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 130/287 (45%), Gaps = 12/287 (4%)
Query: 117 KSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDE 175
K+F +L L + R+ FG + T N + C + A +F +
Sbjct: 147 KTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIK 206
Query: 176 MRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFRE---FKLEGCVTIYTNLIKGVC 232
++ ++PD+ T+ T+I C+ L EA +L M E +E I L+K
Sbjct: 207 LKE-FIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKK-N 264
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
+ E S F + + K+G LD Y +I+ L K G+ + A +V +EMRE G +++
Sbjct: 265 QFDEASKVFYVM--VSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNL 322
Query: 293 TCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPR 352
T +I + EAY +++GVE PD+ Y+ + L K + SEA ++F M +
Sbjct: 323 TWASLIYGLLVKRRVVEAYGLVEGVEN--PDISIYHGLIKGLVKIKRASEATEVFRKMIQ 380
Query: 353 RGCAPDVVTYRTLFDGLC--RWRQFREAVVVLDEMMFKGYAPLSKNL 397
RGC P + TY L G R R+ + +V D + G K L
Sbjct: 381 RGCEPIMHTYLMLLQGHLGRRGRKGPDPLVNFDTIFVGGMIKAGKRL 427
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 44/199 (22%)
Query: 122 LLHALLTCRQFDAVTEL-----AARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEM 176
++ LL QFD +++ + R G+ D Y ++I C G D A ++FDEM
Sbjct: 256 IMETLLKKNQFDEASKVFYVMVSKRGGDL---DGGFYRVMIDWLCKNGRIDMARKVFDEM 312
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC----VTIYTNLIKGVC 232
R RGV D T+ +LI+ L R+ EA+ L +EG ++IY LIKG+
Sbjct: 313 RERGVYVDNLTWASLIYGLLVKRRVVEAYGL---------VEGVENPDISIYHGLIKGLV 363
Query: 233 KIGELSWAFRIKDEMVKKG---------LKLDAAL-------------YNTL-INALFKA 269
KI S A + +M+++G + L L ++T+ + + KA
Sbjct: 364 KIKRASEATEVFRKMIQRGCEPIMHTYLMLLQGHLGRRGRKGPDPLVNFDTIFVGGMIKA 423
Query: 270 GKKEEALRVLEEMREGGCE 288
GK+ E + +E + G E
Sbjct: 424 GKRLETTKYIERTLKRGLE 442
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 133/305 (43%), Gaps = 11/305 (3%)
Query: 152 TYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM 211
++N ++ + G+ D A L DEM G++PD T+ +L+ ++A + + M
Sbjct: 157 SWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM 216
Query: 212 FREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGK 271
+ L+ + ++L++ V + G L I +++ L D + TLI+ K G
Sbjct: 217 -QIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGY 275
Query: 272 KEEALRVLEEMREGG-CEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVF 330
A V + M WNS+ + ++ EA I EG+KPD I +N
Sbjct: 276 LPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKD---AEALMIRMEKEGIKPDAITWNSL 332
Query: 331 LGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGY 390
GK +A+D+ M +G AP+VV++ +F G + FR A+ V +M +G
Sbjct: 333 ASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGV 392
Query: 391 APLSKNLNAFVSELCQEGNFELLST---VLSDLTSKGKICNEGIWDVVLSMVCKPEKVPE 447
P + ++ + L G LL + V K IC+ + ++ M K +
Sbjct: 393 GPNAATMSTLLKIL---GCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQS 449
Query: 448 SFELL 452
+ E+
Sbjct: 450 AIEIF 454
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 122/283 (43%), Gaps = 12/283 (4%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
+I Y+R + + + F S+ R L S+N++L + D L G
Sbjct: 130 LIVMYSRNGKLELSRKVFNSMK----DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 147 -APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
PD T+N L+ +G + A + M+ G++P ++ +L+ + E L+
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGK 245
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
+ + R +L V + T LI K G L +A + D M K + +N+L++
Sbjct: 246 AIHGYILRN-QLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNI----VAWNSLVSG 300
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPD 323
L A ++A ++ M + G + +++T N + Y E+A ++ + +GV P+
Sbjct: 301 LSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPN 360
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLF 366
V+ + K G + A+ +F M G P+ T TL
Sbjct: 361 VVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/329 (20%), Positives = 134/329 (40%), Gaps = 44/329 (13%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
D +N ++ + G+ ++A ELF EM+ G + +T L+ E ++
Sbjct: 53 DDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIH 112
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
+ R LE V++ +LI + G+L + ++ + M + L + +N+++++ K
Sbjct: 113 GYVLR-LGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNL----SSWNSILSSYTK 167
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILD--GVEGVKPDVIG 326
G ++A+ +L+EM G + + VT N ++ Y + ++A +L + G+KP
Sbjct: 168 LGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSS 227
Query: 327 YNVFL----------------GWLCKEGKWSEA------MDLF------------HDMPR 352
+ L G++ + W + +D++ DM
Sbjct: 228 ISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMD 287
Query: 353 RGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFEL 412
A ++V + +L GL ++A ++ M +G P + N+ S G E
Sbjct: 288 ---AKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEK 344
Query: 413 LSTVLSDLTSKGKICNEGIWDVVLSMVCK 441
V+ + KG N W + S K
Sbjct: 345 ALDVIGKMKEKGVAPNVVSWTAIFSGCSK 373
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/303 (22%), Positives = 118/303 (38%), Gaps = 12/303 (3%)
Query: 114 RTLKSFNTLLHAL-LTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFEL 172
+ + ++N+L+ L C DA + E PDA T+N L G ++A ++
Sbjct: 289 KNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDV 348
Query: 173 FDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVC 232
+M+ +GV P+ ++ + +N R A ++ +M E T+ T L+K +
Sbjct: 349 IGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMST-LLKILG 407
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
+ L + ++K L DA + L++ K+G + A+ + ++
Sbjct: 408 CLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSL----A 463
Query: 293 TCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM 350
+ N M+ Y EE + G++PD I + L G E F M
Sbjct: 464 SWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLM 523
Query: 351 -PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGN 409
R G P + + D L R EA + M K P + AF+S +
Sbjct: 524 RSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLK---PDATIWGAFLSSCKIHRD 580
Query: 410 FEL 412
EL
Sbjct: 581 LEL 583
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 137/335 (40%), Gaps = 21/335 (6%)
Query: 106 SIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGH 165
+I R Q LK FN L R + P TY L +
Sbjct: 118 AIKENRWQSALKIFNLL------------------RKQHWYEPRCKTYTKLFKVLGNCKQ 159
Query: 166 ADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYT 225
D+A LF+ M S G++P + +LI ++ L +AF E M + V +T
Sbjct: 160 PDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFT 219
Query: 226 NLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREG 285
LI CK+G I EM G+ YNT+I+ KAG EE VL +M E
Sbjct: 220 VLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIED 279
Query: 286 GCEWNSV-TCNVMIGEYCRENNFE--EAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSE 342
G V T N +IG Y N E++ + GV+PD+ +N+ + K G + +
Sbjct: 280 GDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKK 339
Query: 343 AMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVS 402
+ M +R + VTY + + + + + V +M ++G P S + V+
Sbjct: 340 MCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVN 399
Query: 403 ELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLS 437
+ G + +VL + + + + ++ +++
Sbjct: 400 AYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIIN 434
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 129/330 (39%), Gaps = 17/330 (5%)
Query: 47 SYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLS 106
+Y + LG K P+ +L ++ L + + +I+ Y ++ +A T
Sbjct: 146 TYTKLFKVLGNCKQ-PDQASLLFEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEY 204
Query: 107 IPSFR-CQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAP-DACTYNILIRASCLRG 164
+ S C+ + +F L+ +FD V + G TYN +I G
Sbjct: 205 MKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAG 264
Query: 165 HADRAFELFDEMRSRGVR-PDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC--- 220
+ + +M G PD T ++I +R+ E + F+L G
Sbjct: 265 MFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKM----ESWYSRFQLMGVQPD 320
Query: 221 VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLE 280
+T + LI K G + D M K+ L YN +I KAG+ E+ V
Sbjct: 321 ITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFR 380
Query: 281 EMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVI----GYNVFLGWLCK 336
+M+ G + NS+T ++ Y + + +L + V DV+ +N + +
Sbjct: 381 KMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQI--VNSDVVLDTPFFNCIINAYGQ 438
Query: 337 EGKWSEAMDLFHDMPRRGCAPDVVTYRTLF 366
G + +L+ M R C PD +T+ T+
Sbjct: 439 AGDLATMKELYIQMEERKCKPDKITFATMI 468
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 108/287 (37%), Gaps = 44/287 (15%)
Query: 44 SLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQT 103
S ++Y+ II G+A M EME VL + D L +I Y R +
Sbjct: 249 STVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESW 308
Query: 104 FLSIPSFRCQRTLKSFNTLLHALLTCRQFDAV-TELAARAGEFGAPDACTYNILIRASCL 162
+ Q + +FN L+ + + + + + F + TYNI+I
Sbjct: 309 YSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFSLTTVTYNIVIETFGK 368
Query: 163 RGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVT 222
G ++ ++F +M+ +GV+P+ T
Sbjct: 369 AGRIEKMDDVFRKMKYQGVKPNSIT----------------------------------- 393
Query: 223 IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEM 282
Y +L+ K G + + ++V + LD +N +INA +AG + +M
Sbjct: 394 -YCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQM 452
Query: 283 REGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNV 329
E C+ + +T MI Y A+ I D V+ ++ +I ++
Sbjct: 453 EERKCKPDKITFATMIKTYT-------AHGIFDAVQELEKQMISSDI 492
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 94/197 (47%), Gaps = 15/197 (7%)
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMR 177
+N ++H L +FD + G PD TYN++IR S L RA +L+ EM
Sbjct: 17 YNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSL----GRAEKLYAEMI 72
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGEL 237
RG+ PD T+ ++IH LC+ ++L +A ++ + C T + LI G CK +
Sbjct: 73 RRGLVPDTITYNSMIHGLCKQNKLAQARKVSKS---------CST-FNTLINGYCKATRV 122
Query: 238 SWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVM 297
+ EM ++G+ + Y TLI+ + G AL + +EM G +S+T +
Sbjct: 123 KDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITFRDI 182
Query: 298 IGEYCRENNFEEAYRIL 314
+ + C +A +L
Sbjct: 183 LPQLCSRKELRKAVAML 199
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 34/222 (15%)
Query: 172 LFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC---VTIYTNLI 228
+F MR + D A + +IH LC+ + EA +F + G V Y +I
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEA----GNIFTNLLISGLQPDVQTYNMMI 56
Query: 229 KGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCE 288
+ L A ++ EM+++GL D YN++I+ L K K +A +V + C
Sbjct: 57 R----FSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKS-----CS 107
Query: 289 WNSVTCNVMIGEYCRENNFEEAYRILDGVE--------GVKPDVIGYNVFLGWLCKEGKW 340
T N +I YC+ A R+ DG+ G+ +VI Y + + G +
Sbjct: 108 ----TFNTLINGYCK------ATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDF 157
Query: 341 SEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVL 382
+ A+D+F +M G +T+R + LC ++ R+AV +L
Sbjct: 158 NTALDIFQEMVSNGVYSSSITFRDILPQLCSRKELRKAVAML 199
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 11/196 (5%)
Query: 210 EMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKA 269
++ RE ++ Y +I G+CK G+ A I ++ GL+ D YN +I F +
Sbjct: 3 KVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIR--FSS 60
Query: 270 GKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNV 329
+ E L EM G +++T N MI C++N +A + V +N
Sbjct: 61 LGRAEKL--YAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARK-------VSKSCSTFNT 111
Query: 330 FLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKG 389
+ CK + + M+LF +M RRG +V+TY TL G + F A+ + EM+ G
Sbjct: 112 LINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNG 171
Query: 390 YAPLSKNLNAFVSELC 405
S + +LC
Sbjct: 172 VYSSSITFRDILPQLC 187
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Query: 323 DVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVL 382
D GYN+ + LCK GK+ EA ++F ++ G PDV TY + R+ A +
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLGRAEKLY 68
Query: 383 DEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKP 442
EM+ +G P + N+ + LC++ L+ K C+ ++ +++ CK
Sbjct: 69 AEMIRRGLVPDTITYNSMIHGLCKQNK-------LAQARKVSKSCST--FNTLINGYCKA 119
Query: 443 EKVPESFELL 452
+V + L
Sbjct: 120 TRVKDGMNLF 129
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 154/346 (44%), Gaps = 10/346 (2%)
Query: 115 TLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELF 173
L+ N L+ + A ++ ++ EFG P+A TY + + A C R D A +
Sbjct: 230 NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVC 289
Query: 174 DEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCK 233
++M GV + G +I C+ + EA+ + E + + + LI +CK
Sbjct: 290 EKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYE-LAKTKEKSLPPRFVATLITALCK 348
Query: 234 -IGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
G +++A + ++ + + ++ +I++L + ++A +L +M G +
Sbjct: 349 NDGTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNA 408
Query: 293 TCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM 350
N+++ + + +EA +L +E G+KPDV Y V + K G EA ++ +
Sbjct: 409 VFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEA 468
Query: 351 PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEG-N 409
++ VTY L G C+ ++ EA+ +L+EM G P + N + C + +
Sbjct: 469 KKKHKKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALD 528
Query: 410 FELLSTVLSDLTSKG---KICNEGIWDVVLSMVCKPEKVPESFELL 452
+E + ++ KG ++G+ V M + KV E LL
Sbjct: 529 WEKAEVLFEEMKQKGLHLNAISQGLIRAVKEMESEA-KVTEDGNLL 573
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 151/354 (42%), Gaps = 24/354 (6%)
Query: 13 SSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLP---EMEQVLH 69
+SL+R+ S +Q F + F + +Y ++ LP M +
Sbjct: 86 NSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNF-TYPFLLKACSGQSWLPVVKMMHNHIE 144
Query: 70 QLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTC 129
+L L + VP L I Y+R V+ + + +R S+N++L L+
Sbjct: 145 KLGLSSDIYVPNAL----IDCYSRC--GGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKA 198
Query: 130 RQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFG 189
+ L E D ++N ++ +AFELF++M R + ++
Sbjct: 199 GELRDARRLF---DEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPER----NTVSWS 251
Query: 190 TLIHRLCENSRLREAFELKEEMFREFKLEG-CVTIYTNLIKGVCKIGELSWAFRIKDEMV 248
T++ + + E+ MF + L V +T +I G + G L A R+ D+MV
Sbjct: 252 TMVMGYSKAGDM----EMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMV 307
Query: 249 KKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFE 308
GLK DAA +++ A ++G +R+ ++ N+ N ++ Y + N +
Sbjct: 308 ASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLK 367
Query: 309 EAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTY 362
+A+ + + + K D++ +N L L G EA++LF M R G PD VT+
Sbjct: 368 KAFDVFNDIP--KKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTF 419
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 143/335 (42%), Gaps = 16/335 (4%)
Query: 122 LLHALLTCRQFDAVTELAARA-GEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRG 180
L+ AL CRQ T LA R + P+ N LIRA +AF +F EM+ G
Sbjct: 57 LISALSLCRQ----TNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFG 112
Query: 181 VRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWA 240
+ D T+ L+ + C ++ + L + + LI + G L
Sbjct: 113 LFADNFTYPFLL-KACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRCGGL--G 169
Query: 241 FRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGE 300
R ++ +K + D +N+++ L KAG+ +A R+ +EM + + ++ N M+
Sbjct: 170 VRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR----DLISWNTMLDG 225
Query: 301 YCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVV 360
Y R +A+ + + + + + + ++ + K G A +F MP A +VV
Sbjct: 226 YARCREMSKAFELFEKMP--ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLP--AKNVV 281
Query: 361 TYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDL 420
T+ + G +EA ++D+M+ G + + + ++ + G L + S L
Sbjct: 282 TWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSIL 341
Query: 421 TSKGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
N + + +L M K + ++F++ + +
Sbjct: 342 KRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDI 376
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 110/234 (47%), Gaps = 2/234 (0%)
Query: 221 VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLE 280
V +Y +K K +L + ++ DEM+++G+K D A + T+I+ + G + A+ E
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFE 234
Query: 281 EMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILD--GVEGVKPDVIGYNVFLGWLCKEG 338
+M GCE ++VT MI Y R N + A + D E + D + ++ + G
Sbjct: 235 KMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSG 294
Query: 339 KWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLN 398
+ ++++ +M G P++V Y L D + R ++ +A ++ +++ G+ P
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYA 354
Query: 399 AFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
A V + + + ++ KG +++ +LSM V E+FE+
Sbjct: 355 ALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIF 408
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 102/235 (43%), Gaps = 3/235 (1%)
Query: 153 YNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMF 212
YN+ ++ +++ +LFDEM RG++PD ATF T+I +N + A E E+M
Sbjct: 178 YNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKM- 236
Query: 213 REFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKK 272
F E +I + G + A + D + ++DA ++TLI +G
Sbjct: 237 SSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNY 296
Query: 273 EEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVF 330
+ L + EEM+ G + N V N +I R +A I + G P+ Y
Sbjct: 297 DGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAAL 356
Query: 331 LGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
+ + +A+ ++ +M +G + V+ Y TL R EA + +M
Sbjct: 357 VRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDM 411
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 155/385 (40%), Gaps = 52/385 (13%)
Query: 16 LRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDT 75
L + +P A L LN N +P R +L Y++ + ++K L + E++ ++
Sbjct: 149 LNNMTNPETA-PLVLN-NLLETMKPSREVIL-YNVTMKVFRKSKDLEKSEKLFDEM---- 201
Query: 76 RHRVPEPLLCHVITFYARARQ---PSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQF 132
R +P T + ARQ P RAV+ F + SF C+ + ++ A
Sbjct: 202 LERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNV 261
Query: 133 DAVTELAARA-GEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTL 191
D L RA E DA T++ LIR + G+ D +++EM++ GV+P+ + L
Sbjct: 262 DMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRL 321
Query: 192 IHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKG 251
I + R + ++ K IY +LI G
Sbjct: 322 IDSM---GRAKRPWQAK-------------IIYKDLITN--------------------G 345
Query: 252 LKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNF-EEA 310
+ + Y L+ A +A ++AL + EM+E G + N ++ C +N + +EA
Sbjct: 346 FTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLS-MCADNRYVDEA 404
Query: 311 YRI---LDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFD 367
+ I + E PD ++ + G+ SEA M G P + ++
Sbjct: 405 FEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQ 464
Query: 368 GLCRWRQFREAVVVLDEMMFKGYAP 392
+ +Q + V D+++ G P
Sbjct: 465 CYGKAKQVDDVVRTFDQVLELGITP 489
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 150/378 (39%), Gaps = 53/378 (14%)
Query: 41 FRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRA 100
F H+ ++ I L AK++ M L + R L ++ YA A + A
Sbjct: 142 FHHTRATFHAIFKILRGAKLVTLMIDFLDRSVGFESCRHSLRLCDALVVGYAVAGRTDIA 201
Query: 101 VQTF-------LSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTY 153
+Q F L + SF ++ LL+AL+ + FD+ + + G A T+
Sbjct: 202 LQHFGNMRFRGLDLDSF-------GYHVLLNALVEEKCFDSFDVIFDQISVRGFVCAVTH 254
Query: 154 NILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFR 213
+IL++ C +G D A + + + G L+ LC + +EA +L +E+
Sbjct: 255 SILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEI-- 312
Query: 214 EFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKE 273
KL G V +D A YN I AL KAG
Sbjct: 313 --KLVGTVN-------------------------------MDRA-YNIWIRALIKAGFLN 338
Query: 274 EALRVLEEMRE-GGCEWNSVTCNVMIGEYCRENNFEEAYRILDG--VEGVKPDVIGYNVF 330
L+++ GCE N M+ + +ENN + Y IL V GV P+ N
Sbjct: 339 NPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAA 398
Query: 331 LGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGY 390
L + CK G EA++L+ G AP ++Y L LC +A VL + +G+
Sbjct: 399 LCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGH 458
Query: 391 APLSKNLNAFVSELCQEG 408
K + + LC +G
Sbjct: 459 FLGGKTFSTLTNALCWKG 476
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/371 (21%), Positives = 158/371 (42%), Gaps = 16/371 (4%)
Query: 88 ITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTC----RQFDAVTELAARAG 143
+ F+ +A A++ + S T S+N L+H L + +D + R
Sbjct: 399 LCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGH 458
Query: 144 EFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLRE 203
G T++ L A C +G D A EL R + P + +I LC+ ++ +
Sbjct: 459 FLGGK---TFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVED 515
Query: 204 AFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLI 263
A + E +F + ++ ++T+LI G + A ++ M +KG +LY +I
Sbjct: 516 ALMINE-LFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVI 574
Query: 264 NAL--FKAGKKEEALRVLEEMREGGCEWNSVTCNVMI---GEYCRENNFEEAYRILDGVE 318
+ ++G+K L + + E N+ I G + Y ++D +
Sbjct: 575 QCVCEMESGEKN-FFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDR-D 632
Query: 319 GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREA 378
G+ P V + L K K ++A+ FHD+ +G + Y+ + GLC+ + +A
Sbjct: 633 GITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKKRL-YQVMIVGLCKANKLDDA 691
Query: 379 VVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSM 438
+ L+EM +G P + + +LC E ++ ++++ G+ I +V+L
Sbjct: 692 MHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHN 751
Query: 439 VCKPEKVPESF 449
K + V E++
Sbjct: 752 AMKSKGVYEAW 762
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 159/396 (40%), Gaps = 38/396 (9%)
Query: 73 LDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQF 132
LD +LC + F ARQP T +F+ + L +
Sbjct: 116 LDVLSHTRYDILCCLKFFDWAARQPG-------------FHHTRATFHAIFKILRGAKLV 162
Query: 133 DAVTELAARAGEFGAPDACTYNI-----LIRASCLRGHADRAFELFDEMRSRGVRPDQAT 187
+ + R+ F ++C +++ L+ + G D A + F MR RG+ D
Sbjct: 163 TLMIDFLDRSVGF---ESCRHSLRLCDALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFG 219
Query: 188 FGTLIHRLCENSRLREAFELKEEMFREFKLEG--CVTIYTNLIKGVCKIGELSWAFRIKD 245
+ L++ L E + F+ + +F + + G C ++ L+K CK G+L A +
Sbjct: 220 YHVLLNALVE----EKCFDSFDVIFDQISVRGFVCAVTHSILVKKFCKQGKLDEA----E 271
Query: 246 EMVKKGLKLDAALYNT----LINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEY 301
+ ++ L D A + L++AL K +EA ++L+E++ G N+ I
Sbjct: 272 DYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRAL 331
Query: 302 CRE---NNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPD 358
+ NN + + + +EG + +V YN + L KE D+ +M RG +P+
Sbjct: 332 IKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPN 391
Query: 359 VVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLS 418
T C+ EA+ + G+AP + + N + LC + E VL
Sbjct: 392 KKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLK 451
Query: 419 DLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDA 454
+G + + + +C K + EL+ A
Sbjct: 452 GAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIA 487
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 15/247 (6%)
Query: 152 TYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM 211
YN+ I + G A ++D M G+ P A+ ++ +N ++ +A ++
Sbjct: 605 AYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDL 664
Query: 212 FREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGK 271
+ K + +Y +I G+CK +L A +EM +GL+ Y I L K
Sbjct: 665 REQGKTKK--RLYQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEK 722
Query: 272 KEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFL 331
+EA+ ++ E R+ G + NV++ + EA+ + +E P++ L
Sbjct: 723 YDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRNIEDKIPEMKS----L 778
Query: 332 GWLCKEGKWSEAMDLFHDMPR-----RGCAP-DVVTYRTLFDGLCRWRQFREAVVVLDEM 385
G L G +S +D+ ++ R C P D+ TY L + Q +A +++ +
Sbjct: 779 GELI--GLFSGRIDMEVELKRLDEVIEKCYPLDMYTYNMLLRMIV-MNQAEDAYEMVERI 835
Query: 386 MFKGYAP 392
+GY P
Sbjct: 836 ARRGYVP 842
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 128/295 (43%), Gaps = 25/295 (8%)
Query: 152 TYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM 211
+++LI++ D A + ++RSRG+ +T LI + +++ E+
Sbjct: 164 VFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREV 223
Query: 212 F------------REFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKK-GLKLDAAL 258
F K++ T + +++ + GE RI EM ++ G +
Sbjct: 224 FGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYS 283
Query: 259 YNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFE-----EAYRI 313
YN L+ A G EA +V EEM+ G ++ V N MIG C +NFE E +R
Sbjct: 284 YNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLC--SNFEVVKAKELFRD 341
Query: 314 LDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWR 373
+ G++G++ + Y + CK G + ++ +M R+G D +T L +GLC R
Sbjct: 342 M-GLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDR 400
Query: 374 QFREAV----VVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
+ V +V D + + P V LC++G + + +++ KG
Sbjct: 401 DGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKG 455
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 20/234 (8%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSR-GVRPDQATFGTLIHRLCENSRLREAFE 206
P+A T+N ++ + G + ++ EM G P+ ++ L+ C + EA
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEA-- 300
Query: 207 LKEEMFREFKLEGCV---TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLI 263
E+++ E K+ G V Y +I G+C E+ A + +M KG++ Y L+
Sbjct: 301 --EKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLV 358
Query: 264 NALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVK-- 321
N KAG + L V EM+ G E + +T ++ C + + + R+++ + VK
Sbjct: 359 NGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQ---RVVEAADIVKDA 415
Query: 322 -------PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDG 368
P Y + + LC++GK A+++ +M +G P TYR DG
Sbjct: 416 VREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDG 469
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 78/173 (45%), Gaps = 8/173 (4%)
Query: 118 SFNTLLHALLTCRQFDAVT--ELAARAGEFGAPDAC-TYNILIRASCLRGHADRAFELFD 174
++NT++ L C F+ V EL G G C TY L+ C G D ++
Sbjct: 318 AYNTMIGGL--CSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYR 375
Query: 175 EMRSRGVRPDQATFGTLIHRLCEN---SRLREAFELKEEMFREFKLEGCVTIYTNLIKGV 231
EM+ +G D T L+ LC++ R+ EA ++ ++ RE Y L+K +
Sbjct: 376 EMKRKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRL 435
Query: 232 CKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMRE 284
C+ G++ A I+ EMV KG K Y I+ G +E + + EM E
Sbjct: 436 CEDGKMDRALNIQAEMVGKGFKPSQETYRAFIDGYGIVGDEETSALLAIEMAE 488
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 129/296 (43%), Gaps = 17/296 (5%)
Query: 74 DTRHRVPEPL-LCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQF 132
D R+ P+ + V++ + A RA Q + ++N LL Q
Sbjct: 444 DDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQI 503
Query: 133 DAVTELAARAGEFGA--PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGT 190
D +L E PD +YNI+I L + A F+EMR+RG+ P + ++ T
Sbjct: 504 DRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTT 563
Query: 191 LIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKK 250
L+ + + + A + +EM + +++ + + L++G C++G + A R+ M +
Sbjct: 564 LMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKEN 623
Query: 251 GLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA 310
G + A Y +L N + +A K +AL + +E++E C V E +++ + A
Sbjct: 624 GFYPNVATYGSLANGVSQARKPGDALLLWKEIKE--------RCAVKKKEAPSDSSSDPA 675
Query: 311 YRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLF 366
+L KPD + + + +A+++ M G P+ Y+ ++
Sbjct: 676 PPML------KPDEGLLDTLADICVRAAFFKKALEIIACMEENGIPPNKTKYKKIY 725
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 108/246 (43%), Gaps = 8/246 (3%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMR---SRGVRPDQATFGTLIHRLCENSRLRE 203
APD+ Y L++ G + + MR R PD+ T+ T++ +
Sbjct: 411 APDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDR 470
Query: 204 AFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKK-GLKLDAALYNTL 262
A ++ EM R +T Y L+KG CK ++ A + EM + G++ D YN +
Sbjct: 471 ARQVLAEMARMGVPANRIT-YNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNII 529
Query: 263 INALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--- 319
I+ AL EMR G ++ ++ + + A R+ D +
Sbjct: 530 IDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPR 589
Query: 320 VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAV 379
VK D+I +N+ + C+ G +A + M G P+V TY +L +G+ + R+ +A+
Sbjct: 590 VKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDAL 649
Query: 380 VVLDEM 385
++ E+
Sbjct: 650 LLWKEI 655
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 145/370 (39%), Gaps = 47/370 (12%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEM 176
+FN +L+A D +L E+ PD TYN++I+ G + + + +
Sbjct: 238 AFNAVLNACANLGDTDKYWKLFEEMSEWDCEPDVLTYNVMIKLCARVGRKELIVFVLERI 297
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTI------------- 223
+G++ T +L+ LR A + + M RE + + C +
Sbjct: 298 IDKGIKVCMTTMHSLVAAYVGFGDLRTAERIVQAM-REKRRDLCKVLRECNAEDLKEKEE 356
Query: 224 YTNLIKGVCKIGELSWAFRIKDEMVKKGL-----KL--------------------DAAL 258
+ + +DE+ ++G+ KL D+ +
Sbjct: 357 EEAEDDEDAFEDDEDSGYSARDEVSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRI 416
Query: 259 YNTLINALFKAGKKEEALRVLEEMR---EGGCEWNSVTCNVMIGEYCRENNFEEAYRILD 315
Y TL+ K G+ + R+LE MR + + VT ++ + + A ++L
Sbjct: 417 YTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLA 476
Query: 316 GVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPR-RGCAPDVVTYRTLFDGLCRW 372
+ GV + I YNV L CK+ + A DL +M G PDVV+Y + DG
Sbjct: 477 EMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILI 536
Query: 373 RQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGI- 431
A+ +EM +G AP + + G +L + V ++ + ++ + I
Sbjct: 537 DDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIA 596
Query: 432 WDVVLSMVCK 441
W++++ C+
Sbjct: 597 WNMLVEGYCR 606
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 124/279 (44%), Gaps = 27/279 (9%)
Query: 144 EFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLRE 203
E DA +N +I +D A ELF M+ G +QAT +++ R C L E
Sbjct: 219 EMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVL-RACTGLALLE 277
Query: 204 AFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLI 263
+ K + + + L+ CK G L A R+ ++M ++ D ++T+I
Sbjct: 278 LG--MQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER----DVITWSTMI 331
Query: 264 NALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA---YRILDGVEGV 320
+ L + G +EAL++ E M+ G + N +T ++ E+ +R + + G+
Sbjct: 332 SGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGI 391
Query: 321 KPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVV 380
P Y + L K GK +A+ L ++M C PD VT+RTL G CR
Sbjct: 392 DPVREHYGCMIDLLGKAGKLDDAVKLLNEME---CEPDAVTWRTLL-GACR--------- 438
Query: 381 VLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSD 419
V M+ YA +K + A E G + LLS + ++
Sbjct: 439 VQRNMVLAEYA--AKKVIALDPE--DAGTYTLLSNIYAN 473
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 18/228 (7%)
Query: 168 RAFELFDEMRSRGVRPDQATFGTLIHRLC---ENSRLREAFELKEEMFREFKLEGCVTIY 224
+A EL M VRP+ T+ +++ R C + R+ +KE LE V +
Sbjct: 145 KALELLVLMLRDNVRPNVYTYSSVL-RSCNGMSDVRMLHCGIIKE------GLESDVFVR 197
Query: 225 TNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMRE 284
+ LI K+GE A + DEMV DA ++N++I + + + AL + + M+
Sbjct: 198 SALIDVFAKLGEPEDALSVFDEMVTG----DAIVWNSIIGGFAQNSRSDVALELFKRMKR 253
Query: 285 GGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAM 344
G T ++ E + + D+I N + CK G +A+
Sbjct: 254 AGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDAL 313
Query: 345 DLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
+F+ M R DV+T+ T+ GL + +EA+ + + M G P
Sbjct: 314 RVFNQMKER----DVITWSTMISGLAQNGYSQEALKLFERMKSSGTKP 357
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 131/323 (40%), Gaps = 8/323 (2%)
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEMR 177
F L+ A F+ + + + G+ P+ +Y L+ + G + A +F M+
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 208
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFK--LEGCVTIYTNLIKGVCKIG 235
S G P T+ ++ E + +EA E+ E + E K L+ +Y +I K G
Sbjct: 209 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 268
Query: 236 ELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCN 295
A ++ MV KG+ YN+L++ F+ KE + ++ ++M+ + + V+
Sbjct: 269 NYEKARKVFSSMVGKGVPQSTVTYNSLMS--FETSYKEVS-KIYDQMQRSDIQPDVVSYA 325
Query: 296 VMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR 353
++I Y R EEA + + + GV+P YN+ L G +A +F M R
Sbjct: 326 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 385
Query: 354 GCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELL 413
PD+ +Y T+ A + G+ P + + + E +
Sbjct: 386 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKM 445
Query: 414 STVLSDLTSKGKICNEGIWDVVL 436
V + G N+ I ++
Sbjct: 446 MEVYEKMRLSGIKANQTILTTIM 468
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 131/308 (42%), Gaps = 9/308 (2%)
Query: 44 SLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHR--VPEPLLCHVITF-YARARQPSRA 100
S ++Y +I+ E E+V L LD + P+ + H++ + Y +A +A
Sbjct: 215 SAITYQIILKTFVEGDKFKEAEEVFETL-LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKA 273
Query: 101 VQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRAS 160
+ F S+ ++ ++N+L+ + ++ + + R+ PD +Y +LI+A
Sbjct: 274 RKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDI--QPDVVSYALLIKAY 331
Query: 161 CLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC 220
+ A +F+EM GVRP + L+ + + +A + + M R+ ++
Sbjct: 332 GRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD-RIFPD 390
Query: 221 VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLE 280
+ YT ++ ++ A + + G + + Y TLI KA E+ + V E
Sbjct: 391 LWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE 450
Query: 281 EMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEG 338
+MR G + N ++ R NF A +E GV PD NV L +
Sbjct: 451 KMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQD 510
Query: 339 KWSEAMDL 346
+ EA +L
Sbjct: 511 ELEEAKEL 518
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 110/257 (42%), Gaps = 6/257 (2%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD Y+++I G+ ++A ++F M +GV T+ +L + + +E ++
Sbjct: 252 PDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKI 308
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
++M R ++ V Y LIK + A + +EM+ G++ YN L++A
Sbjct: 309 YDQMQRS-DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 367
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILD--GVEGVKPDVI 325
+G E+A V + MR + + M+ Y ++ E A + V+G +P+++
Sbjct: 368 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIV 427
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
Y + K + M+++ M G + T+ D R + F A+ EM
Sbjct: 428 TYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM 487
Query: 386 MFKGYAPLSKNLNAFVS 402
G P K N +S
Sbjct: 488 ESCGVPPDQKAKNVLLS 504
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 7/143 (4%)
Query: 289 WN--SVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAM 344
WN + ++I Y + NF A R+L + G P+VI Y + + GK + A
Sbjct: 142 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 201
Query: 345 DLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPL---SKNLNAFV 401
+F M G P +TY+ + +F+EA V + ++ + +PL K + +
Sbjct: 202 AIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 261
Query: 402 SELCQEGNFELLSTVLSDLTSKG 424
+ GN+E V S + KG
Sbjct: 262 YMYKKAGNYEKARKVFSSMVGKG 284
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 120/270 (44%), Gaps = 22/270 (8%)
Query: 187 TFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDE 246
T + I RL R ++ + E+M ++ L+ T ++K +C+ G S I ++
Sbjct: 177 TLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHAS----IAEK 232
Query: 247 MVKKGLK---LDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCR 303
MVK D + + LI+ A K +EA R+ EM GG E + N+M+ C+
Sbjct: 233 MVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCK 292
Query: 304 ENNFEEAYRILDGVE---------GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
++ +++ VE GV + +NV + LCK + EAM LF M G
Sbjct: 293 LCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWG 352
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPL--SKNLNAFVSELCQEGNFEL 412
C PD TY L L + + E ++D+M GY L K F+ LC E
Sbjct: 353 CQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEH 412
Query: 413 LSTVLSDLTSKGKICNEGI--WDVVLSMVC 440
+V + + G C GI +D+++ +C
Sbjct: 413 AMSVFKSMKANG--CKPGIKTYDLLMGKMC 440
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 109/254 (42%), Gaps = 13/254 (5%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
D + ++++ C +GHA A ++ + + PD+ LI C +L EA L
Sbjct: 210 DKESLTLVVKKLCEKGHASIAEKMVKNTANE-IFPDENICDLLISGWCIAEKLDEATRLA 268
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVK-------KGLKLDAALYNT 261
EM R E Y ++ VCK+ F+++ E+ K +G+ + +N
Sbjct: 269 GEMSRG-GFEIGTKAYNMMLDCVCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNV 327
Query: 262 LINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--- 318
LIN L K + EEA+ + M E GC+ ++ T V+I + E ++D ++
Sbjct: 328 LINNLCKIRRTEEAMTLFGRMGEWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAG 387
Query: 319 -GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFRE 377
G + Y FL LC + AM +F M GC P + TY L +C Q
Sbjct: 388 YGELLNKKEYYGFLKILCGIERLEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTR 447
Query: 378 AVVVLDEMMFKGYA 391
A + E KG A
Sbjct: 448 ANGLYKEAAKKGIA 461
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 115/282 (40%), Gaps = 20/282 (7%)
Query: 156 LIRASCLRGHADRAFELFDEMRSR-GVRPDQATFGTLIHRLCENSRLREAFELKEEMFRE 214
L+RA G + + F++M + G++ D+ + ++ +LCE A ++ + E
Sbjct: 185 LVRA----GRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMVKNTANE 240
Query: 215 -FKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKE 273
F E + LI G C +L A R+ EM + G ++ YN +++ + K +K+
Sbjct: 241 IFPDENICDL---LISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKK 297
Query: 274 -------EALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILD--GVEGVKPDV 324
E +VL EM G N+ T NV+I C+ EEA + G G +PD
Sbjct: 298 DPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDA 357
Query: 325 IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAP--DVVTYRTLFDGLCRWRQFREAVVVL 382
Y V + L + + E ++ M G + Y LC + A+ V
Sbjct: 358 ETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIERLEHAMSVF 417
Query: 383 DEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
M G P K + + ++C + + + KG
Sbjct: 418 KSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKG 459
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 131/323 (40%), Gaps = 8/323 (2%)
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEMR 177
F L+ A F+ + + + G+ P+ +Y L+ + G + A +F M+
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFK--LEGCVTIYTNLIKGVCKIG 235
S G P T+ ++ E + +EA E+ E + E K L+ +Y +I K G
Sbjct: 202 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 261
Query: 236 ELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCN 295
A ++ MV KG+ YN+L++ F+ KE + ++ ++M+ + + V+
Sbjct: 262 NYEKARKVFSSMVGKGVPQSTVTYNSLMS--FETSYKEVS-KIYDQMQRSDIQPDVVSYA 318
Query: 296 VMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR 353
++I Y R EEA + + + GV+P YN+ L G +A +F M R
Sbjct: 319 LLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD 378
Query: 354 GCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELL 413
PD+ +Y T+ A + G+ P + + + E +
Sbjct: 379 RIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKM 438
Query: 414 STVLSDLTSKGKICNEGIWDVVL 436
V + G N+ I ++
Sbjct: 439 MEVYEKMRLSGIKANQTILTTIM 461
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 131/308 (42%), Gaps = 9/308 (2%)
Query: 44 SLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHR--VPEPLLCHVITF-YARARQPSRA 100
S ++Y +I+ E E+V L LD + P+ + H++ + Y +A +A
Sbjct: 208 SAITYQIILKTFVEGDKFKEAEEVFETL-LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKA 266
Query: 101 VQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRAS 160
+ F S+ ++ ++N+L+ + ++ + + R+ PD +Y +LI+A
Sbjct: 267 RKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDI--QPDVVSYALLIKAY 324
Query: 161 CLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC 220
+ A +F+EM GVRP + L+ + + +A + + M R+ ++
Sbjct: 325 GRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRD-RIFPD 383
Query: 221 VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLE 280
+ YT ++ ++ A + + G + + Y TLI KA E+ + V E
Sbjct: 384 LWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYE 443
Query: 281 EMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEG 338
+MR G + N ++ R NF A +E GV PD NV L +
Sbjct: 444 KMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQD 503
Query: 339 KWSEAMDL 346
+ EA +L
Sbjct: 504 ELEEAKEL 511
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 110/257 (42%), Gaps = 6/257 (2%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD Y+++I G+ ++A ++F M +GV T+ +L + + +E ++
Sbjct: 245 PDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSL---MSFETSYKEVSKI 301
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
++M R ++ V Y LIK + A + +EM+ G++ YN L++A
Sbjct: 302 YDQMQRS-DIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFA 360
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILD--GVEGVKPDVI 325
+G E+A V + MR + + M+ Y ++ E A + V+G +P+++
Sbjct: 361 ISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIV 420
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
Y + K + M+++ M G + T+ D R + F A+ EM
Sbjct: 421 TYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEM 480
Query: 386 MFKGYAPLSKNLNAFVS 402
G P K N +S
Sbjct: 481 ESCGVPPDQKAKNVLLS 497
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 7/143 (4%)
Query: 289 WN--SVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAM 344
WN + ++I Y + NF A R+L + G P+VI Y + + GK + A
Sbjct: 135 WNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAE 194
Query: 345 DLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPL---SKNLNAFV 401
+F M G P +TY+ + +F+EA V + ++ + +PL K + +
Sbjct: 195 AIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMI 254
Query: 402 SELCQEGNFELLSTVLSDLTSKG 424
+ GN+E V S + KG
Sbjct: 255 YMYKKAGNYEKARKVFSSMVGKG 277
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 120/275 (43%), Gaps = 5/275 (1%)
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFGAP-DACTYNILIRASCLRGHADRAFELFDEMR 177
+N + +L RQF + E+A + G D TY+ +I + ++A E F+ M
Sbjct: 189 YNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMY 248
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGEL 237
G+ PD+ T+ ++ ++ ++ E L E + ++ L K + G+
Sbjct: 249 KTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIA-FSVLGKMFGEAGDY 307
Query: 238 SWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVM 297
+ EM +K + +YNTL+ A+ +AGK A + EM E G N T +
Sbjct: 308 DGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTAL 367
Query: 298 IGEYCRENNFEEAYRILDGVEGVK--PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR-G 354
+ Y + +A ++ + ++ K D I YN L G EA LF+DM
Sbjct: 368 VKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQ 427
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKG 389
C PD +Y + + + +A+ + +EM+ G
Sbjct: 428 CRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAG 462
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 71/158 (44%), Gaps = 2/158 (1%)
Query: 246 EMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCREN 305
EMVK G++LD Y+T+I + +A+ E M + G + VT + ++ Y +
Sbjct: 211 EMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSG 270
Query: 306 NFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYR 363
EE + + G KPD I ++V + G + + +M P+VV Y
Sbjct: 271 KVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYN 330
Query: 364 TLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFV 401
TL + + R + A + +EM+ G P K L A V
Sbjct: 331 TLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALV 368
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 80/179 (44%), Gaps = 4/179 (2%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P+ YN L+ A G A LF+EM G+ P++ T L+ + R+A +L
Sbjct: 324 PNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQL 383
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKK-GLKLDAALYNTLINAL 266
EEM + K +Y L+ IG A R+ ++M + + D Y ++N
Sbjct: 384 WEEM-KAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIY 442
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPD 323
GK E+A+ + EEM + G + N + C ++ + ++ + D GVKPD
Sbjct: 443 GSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPD 501
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P TYN +I C + D A + D M S+G PD TF TLI+ C+ R+ E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
EM R + VT YT LI G C++G+L A + +EM+ G+ D ++ ++ L
Sbjct: 68 FCEMHRRGIVANTVT-YTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Query: 268 KAGKKEEALRVLEEMRE 284
+ +A +LE++++
Sbjct: 127 SKKELRKAFAILEDLQK 143
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 69/133 (51%), Gaps = 2/133 (1%)
Query: 290 NSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLF 347
++T N MI +C+++ ++A R+LD + +G PDV+ ++ + CK + M++F
Sbjct: 9 TTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIF 68
Query: 348 HDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQE 407
+M RRG + VTY TL G C+ A +L+EM+ G AP + ++ LC +
Sbjct: 69 CEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 128
Query: 408 GNFELLSTVLSDL 420
+L DL
Sbjct: 129 KELRKAFAILEDL 141
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 68/134 (50%)
Query: 322 PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVV 381
P I YN + CK+ + +A + M +GC+PDVVT+ TL +G C+ ++ + +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 382 LDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCK 441
EM +G + + CQ G+ + +L+++ S G + + +L+ +C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 442 PEKVPESFELLDAL 455
+++ ++F +L+ L
Sbjct: 128 KKELRKAFAILEDL 141
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 224 YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMR 283
Y ++I G CK + A R+ D M KG D ++TLIN KA + + + + EM
Sbjct: 13 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 72
Query: 284 EGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWS 341
G N+VT +I +C+ + + A +L+ + GV PD I ++ L LC + +
Sbjct: 73 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR 132
Query: 342 EAMDLFHDMPR 352
+A + D+ +
Sbjct: 133 KAFAILEDLQK 143
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 6/138 (4%)
Query: 115 TLKSFNTLLHALLTCRQF---DAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFE 171
T ++N+++ C+Q DA L + A + +PD T++ LI C D E
Sbjct: 9 TTITYNSMIDGF--CKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGME 66
Query: 172 LFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGV 231
+F EM RG+ + T+ TLIH C+ L A +L EM +T + ++ G+
Sbjct: 67 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHC-MLAGL 125
Query: 232 CKIGELSWAFRIKDEMVK 249
C EL AF I +++ K
Sbjct: 126 CSKKELRKAFAILEDLQK 143
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 7/141 (4%)
Query: 181 VRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC---VTIYTNLIKGVCKIGEL 237
+ P T+ ++I C+ R+ +A + M +GC V ++ LI G CK +
Sbjct: 6 IFPTTITYNSMIDGFCKQDRVDDA----KRMLDSMASKGCSPDVVTFSTLINGYCKAKRV 61
Query: 238 SWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVM 297
I EM ++G+ + Y TLI+ + G + A +L EM G + +T + M
Sbjct: 62 DNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCM 121
Query: 298 IGEYCRENNFEEAYRILDGVE 318
+ C + +A+ IL+ ++
Sbjct: 122 LAGLCSKKELRKAFAILEDLQ 142
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 138/324 (42%), Gaps = 19/324 (5%)
Query: 138 LAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCE 197
L AR G F PD L+ G A ++FD MR R + T+ +I
Sbjct: 103 LHARFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRERNL----FTWSAMIGAYSR 158
Query: 198 NSRLREAFELKEEMFREFKLEGCVT---IYTNLIKGVCKIGELSWAFRIKDEMVKKGLKL 254
+R RE +L FR +G + ++ +++G G++ I ++K G+
Sbjct: 159 ENRWREVAKL----FRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSS 214
Query: 255 DAALYNTLINALFKAGKKEEALRVLEEMREGGC-EWNSVTCNVMIGEYCRENNFEEAYRI 313
+ N+++ K G+ + A + MRE WNSV + YC+ EEA +
Sbjct: 215 CLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSV-----LLAYCQNGKHEEAVEL 269
Query: 314 LDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCR 371
+ +E G+ P ++ +N+ +G + GK AMDL M G DV T+ + GL
Sbjct: 270 VKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIH 329
Query: 372 WRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGI 431
+A+ + +M G P + + + VS S V S G I + +
Sbjct: 330 NGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLV 389
Query: 432 WDVVLSMVCKPEKVPESFELLDAL 455
+ ++ M K K+ ++ ++ D++
Sbjct: 390 GNSLVDMYSKCGKLEDARKVFDSV 413
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 129/315 (40%), Gaps = 40/315 (12%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
++ YA+ + A + F + +R + ++N++L A + + EL + G
Sbjct: 222 ILAVYAKCGELDFATKFFRRMR----ERDVIAWNSVLLAYCQNGKHEEAVELVKEMEKEG 277
Query: 147 -APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
+P T+NILI G D A +L +M + G+ D T+ +I L N +A
Sbjct: 278 ISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQAL 337
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
++ +MF + VTI + + C + ++ + VK G D + N+L++
Sbjct: 338 DMFRKMFLAGVVPNAVTIMSAVSACSC-LKVINQGSEVHSIAVKMGFIDDVLVGNSLVDM 396
Query: 266 LFKAGKKEEALRVLEEMREGGC-EWNS------------------------------VTC 294
K GK E+A +V + ++ WNS +T
Sbjct: 397 YSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITW 456
Query: 295 NVMIGEYCRENNFEEAYRILDGVEG---VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
N MI Y + + EA + +E V+ + +N+ + + GK EA++LF M
Sbjct: 457 NTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQ 516
Query: 352 RRGCAPDVVTYRTLF 366
P+ VT +L
Sbjct: 517 FSRFMPNSVTILSLL 531
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 109/270 (40%), Gaps = 44/270 (16%)
Query: 155 ILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFRE 214
+ + A C G D A + F MR R D + +++ C+N + EA EL +EM +E
Sbjct: 223 LAVYAKC--GELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKE 276
Query: 215 FKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEE 274
G VT + LI G ++G+ A + +M G+ D + +I+ L G + +
Sbjct: 277 GISPGLVT-WNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQ 335
Query: 275 ALRVLEEMREGGCEWNSVTC-----------------------------------NVMIG 299
AL + +M G N+VT N ++
Sbjct: 336 ALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVD 395
Query: 300 EYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDV 359
Y + E+A ++ D V+ DV +N + C+ G +A +LF M P++
Sbjct: 396 MYSKCGKLEDARKVFDSVK--NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNI 453
Query: 360 VTYRTLFDGLCRWRQFREAVVVLDEMMFKG 389
+T+ T+ G + EA+ + M G
Sbjct: 454 ITWNTMISGYIKNGDEGEAMDLFQRMEKDG 483
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 101/227 (44%), Gaps = 20/227 (8%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
D T+N +I C G+ +A+ELF M+ +RP+ T+ T+I +N EA +L
Sbjct: 417 DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLF 476
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALY---NTLINA 265
+ M ++ K++ + +I G + G+ KDE ++ K+ + + + I +
Sbjct: 477 QRMEKDGKVQRNTATWNLIIAGYIQNGK-------KDEALELFRKMQFSRFMPNSVTILS 529
Query: 266 LFKAGKKEEALRVLEEMREGGC------EWNSVTCNVMIGEYCRENNFEEAYRILDGVEG 319
L A +++ E+ GC + N + Y + + E + I G+E
Sbjct: 530 LLPACANLLGAKMVREIH--GCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGME- 586
Query: 320 VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLF 366
D+I +N +G G + A+ LF+ M +G P+ T ++
Sbjct: 587 -TKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSII 632
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/374 (22%), Positives = 151/374 (40%), Gaps = 57/374 (15%)
Query: 34 PQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYAR 93
++ F+H + +++ + L R M+ E+E +L ++ V E + C +I Y
Sbjct: 136 ASVQYQGFKHLPQACEIMASMLIREGMVKEVELLLMEMERHGDTMVNEGIFCDLIGKYVD 195
Query: 94 ARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTY 153
+AV F + R G P Y
Sbjct: 196 DFDSRKAVMLF--------------------------------DWMRRKGL--VPLTSCY 221
Query: 154 NILIRASCLRGHADRAFEL---FDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEE 210
ILI + A+ + + E R+ + + G +I LC + +++EA L
Sbjct: 222 QILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGKVIELLCLDQKVQEARVLA-- 279
Query: 211 MFREFKLEGCV---TIYTNLIKGVCKIGE----LSWAFRIKDEMVKKGLKLDAALYNTLI 263
R+ GC+ +IY+ + G + + LS+ +K E D + N ++
Sbjct: 280 --RKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVKYEP-------DVFVGNRIL 330
Query: 264 NALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVK 321
++L + E A +EE+ G + + VT ++IG C E + + A L + +G K
Sbjct: 331 HSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVLYLSEIMSKGYK 390
Query: 322 PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVV 381
PDV YN L L ++G W + +M G + T++ + G C+ RQF EA +
Sbjct: 391 PDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEEAKRI 450
Query: 382 LDEMMFKGYAPLSK 395
+++M G SK
Sbjct: 451 VNKMFGYGLIEASK 464
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 115/264 (43%), Gaps = 9/264 (3%)
Query: 168 RAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL---KEEMFREFKLEGCVTIY 224
+A LFD MR +G+ P + + LI +L R A+ + E E +I
Sbjct: 201 KAVMLFDWMRRKGLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSI- 259
Query: 225 TNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMRE 284
+I+ +C ++ A + ++V G L++++Y+ + + E+ L + E++
Sbjct: 260 GKVIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIGYNEKQDFEDLLSFIGEVK- 318
Query: 285 GGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSE 342
E + N ++ CR E AY ++ +E G K D + + + +GW C EG
Sbjct: 319 --YEPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKR 376
Query: 343 AMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVS 402
A+ ++ +G PDV +Y + GL R ++ +LDEM G V+
Sbjct: 377 AVLYLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVT 436
Query: 403 ELCQEGNFELLSTVLSDLTSKGKI 426
C+ FE +++ + G I
Sbjct: 437 GYCKARQFEEAKRIVNKMFGYGLI 460
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 118/281 (41%), Gaps = 20/281 (7%)
Query: 152 TYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM 211
YN LI+ C AF + DEM + P + LI RLC ++ AF L E++
Sbjct: 741 VYNHLIKGLCTEKKDSAAFAILDEMLDKKHIPSLGSCLMLIPRLCRANKAGTAFNLAEQI 800
Query: 212 FREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGK 271
+ ++ LIKG+ G++ A M+ GL + YN + N +F+
Sbjct: 801 DSSY-------VHYALIKGLSLAGKMLDAENQLRIMLSNGL----SSYNKIYNVMFQGYC 849
Query: 272 KEEALRVLEEMREGGCEWNSVTCNV-----MIGEYCRENNFEEAYRILDGV---EGVKPD 323
K +EE+ G ++ C+V + + C E A + + + E
Sbjct: 850 KGNNWMKVEEVL-GLMVRKNIICSVKSYREYVRKMCLEPQSLSAISLKEFLLLGESNPGG 908
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
VI YN+ + ++ + E + +M RG PD T+ L G + ++ L
Sbjct: 909 VIIYNMLIFYMFRAKNHLEVNKVLLEMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLS 968
Query: 384 EMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
M+ KG P +++L A S LC G+ + + + SKG
Sbjct: 969 AMISKGMKPNNRSLRAVTSSLCDNGDVKKALDLWQVMESKG 1009
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 139/315 (44%), Gaps = 14/315 (4%)
Query: 148 PDACTY--NILIRASCLRGHADRAFELFDEMRSRG-VRPDQATFGTLIHRLCENSRLREA 204
P AC ++LIR G L EM G ++ F LI + ++ R+A
Sbjct: 147 PQACEIMASMLIR----EGMVKEVELLLMEMERHGDTMVNEGIFCDLIGKYVDDFDSRKA 202
Query: 205 FELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTL-- 262
L + M R+ L + Y LI + ++ A+RI + V+ +L+ +++
Sbjct: 203 VMLFDWMRRK-GLVPLTSCYQILIDQLVRVHRTESAYRICLDWVETRAELNHMNIDSIGK 261
Query: 263 -INALFKAGKKEEALRVLEEMREGGCEWNS-VTCNVMIGEYCRENNFEEAYRILDGVEGV 320
I L K +EA + ++ GC NS + + IG Y + +FE+ + V+
Sbjct: 262 VIELLCLDQKVQEARVLARKLVALGCILNSSIYSKITIG-YNEKQDFEDLLSFIGEVK-Y 319
Query: 321 KPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVV 380
+PDV N L LC+ A ++ G D VT+ L C + AV+
Sbjct: 320 EPDVFVGNRILHSLCRRFGSERAYVYMEELEHLGFKQDEVTFGILIGWCCYEGDIKRAVL 379
Query: 381 VLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVC 440
L E+M KGY P + NA +S L ++G ++ +L ++ G + + + ++++ C
Sbjct: 380 YLSEIMSKGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYC 439
Query: 441 KPEKVPESFELLDAL 455
K + E+ +++ +
Sbjct: 440 KARQFEEAKRIVNKM 454
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/351 (22%), Positives = 149/351 (42%), Gaps = 20/351 (5%)
Query: 115 TLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFEL-- 172
+L +F ++ RQF+ + + +G LI AS + AF L
Sbjct: 427 SLSTFKIMVTGYCKARQFEEAKRIVNKMFGYG---------LIEASKVEDPLSEAFSLVG 477
Query: 173 FDEMRSRGVRPDQATF--GTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKG 230
FD + R R + +TF L L + E+ + + +LI
Sbjct: 478 FDPLAVRLKRDNDSTFSKAEFFDDLGNGLYLHTDLDAYEQRVNMVLDRSVLPEFNSLIVR 537
Query: 231 VCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKA-GKKEEALRVLEEMREGGCEW 289
+ G+L A R+ DEM + G KL + L+ +L + ++ +LE+ + +
Sbjct: 538 ASEDGDLQTALRLLDEMARWGQKLSRRSFAVLMRSLCASRAHLRVSISLLEKWPKLAYQL 597
Query: 290 NSVTCNVMIGEYCRENNFEEAYRILDG-VEGVKP-DVIGYNVFLGWLCKEGKWSEAMDLF 347
+ T N ++ EYC++ + I V+ P D + Y + CK+ ++ ++++
Sbjct: 598 DGETLNFLVQEYCKKGFSRHSKLIFHKMVQMHHPIDNVTYTSLIRCFCKKETLNDLLNVW 657
Query: 348 HDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN--LNAFVSELC 405
PD+ L++ L R + E VV L E +F Y PLS++ FV +L
Sbjct: 658 GAAQNDNWLPDLNDCGDLWNCLVR-KGLVEEVVQLFERVFISY-PLSQSEACRIFVEKLT 715
Query: 406 QEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
G + +V+ L +G I + +++ ++ +C +K +F +LD ++
Sbjct: 716 VLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEML 766
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 123/295 (41%), Gaps = 22/295 (7%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD T+N L+ + M S+G++P+ + + LC+N +++A +L
Sbjct: 942 PDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPNNRSLRAVTSSLCDNGDVKKALDL 1001
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+ M + G + T +++ + GE+ A + + G+ A Y+ +I L
Sbjct: 1002 WQVMESKGWNLGSSVVQTKIVETLISKGEIPKAEDFLTRVTRNGMM--APNYDNIIKKLS 1059
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRI-LDGVE-GVKPDVI 325
G + A+ +L M + S + + +I R N ++A + VE G+ P +
Sbjct: 1060 DRGNLDIAVHLLNTMLKNQSIPGSSSYDSVINGLLRYNQLDKAMDFHTEMVELGLSPSIS 1119
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVV--LD 383
++ + C+ + E+ L M G +P ++T+ D R+R + V +
Sbjct: 1120 TWSGLVHKFCEACQVLESERLIKSMVGLGESPSQEMFKTVID---RFRVEKNTVKASEMM 1176
Query: 384 EMMFK-GYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLS 437
EMM K GY E+ E ++ L+S + S K EG +LS
Sbjct: 1177 EMMQKCGY------------EVDFETHWSLISNMSSSKEKKTTTAGEGFLSRLLS 1219
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 100/243 (41%), Gaps = 17/243 (6%)
Query: 144 EFGAPDACTYNILIRASCL--RGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRL 201
E G T +I CL G A F M+ +PD + T+I+ LC
Sbjct: 157 ENGKNVVTTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNF 216
Query: 202 REA-FELKEEMFREFKLEGCVTIYTNLIKGVCKIGELS----------W-AFRIKDEMVK 249
++A F L + F+ YT LI C+ G + W A R+ EM+
Sbjct: 217 KKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLF 276
Query: 250 KGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEE 309
+G D YN LI+ K + AL + E+M+ GC N VT N I Y N E
Sbjct: 277 RGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEG 336
Query: 310 AYRILDGVEGVKPDVIG---YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLF 366
A ++ ++ + V G Y + L + + +EA DL +M G P TY+ +
Sbjct: 337 AIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVC 396
Query: 367 DGL 369
D L
Sbjct: 397 DAL 399
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 19/174 (10%)
Query: 262 LINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--G 319
L+ L + G +EAL M+E C+ + N +I CR NF++A +LD ++ G
Sbjct: 171 LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPG 230
Query: 320 VK--PDVIGYNVFLGWLCKEGKWS-----------EAMDLFHDMPRRGCAPDVVTYRTLF 366
+ PD Y + + C+ G + EA +F +M RG PDVVTY L
Sbjct: 231 FRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLI 290
Query: 367 DGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQ----EGNFELLSTV 416
DG C+ + A+ + ++M KG P N+F+ EG E++ T+
Sbjct: 291 DGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTM 344
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG---APDACTYNIL 156
A+ TF + + C+ + ++NT+++AL F L + G PD TY IL
Sbjct: 184 ALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTIL 243
Query: 157 IRASCLRGHAD-----------RAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
I + C G A +F EM RG PD T+ LI C+ +R+ A
Sbjct: 244 ISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRAL 303
Query: 206 ELKEEMFREFKLEGCV---TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKL-DAALYNT 261
EL E+M K +GCV Y + I+ E+ A + M K G + ++ Y
Sbjct: 304 ELFEDM----KTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTP 359
Query: 262 LINALFKAGKKEEALRVLEEMREGG 286
LI+AL + + EA ++ EM E G
Sbjct: 360 LIHALVETRRAAEARDLVVEMVEAG 384
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 91/230 (39%), Gaps = 57/230 (24%)
Query: 253 KLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEW--NSVTCNVMIGEYCR------- 303
K D YNT+INAL + G ++A +L++M+ G + ++ T ++I YCR
Sbjct: 197 KPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGC 256
Query: 304 ----ENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAP 357
EA R+ + G PDV+ YN + CK + A++LF DM +GC P
Sbjct: 257 RKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVP 316
Query: 358 DVVTYRT------------------------------------LFDGLCRWRQFREAVVV 381
+ VTY + L L R+ EA +
Sbjct: 317 NQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDL 376
Query: 382 LDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGI 431
+ EM+ G P L EG L ST+ +L + + EGI
Sbjct: 377 VVEMVEAGLVPREYTYKLVCDALSSEG---LASTLDEELHKRMR---EGI 420
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 13/148 (8%)
Query: 321 KPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG--CAPDVVTYRTLFDGLCRW------ 372
KPDV YN + LC+ G + +A L M G PD TY L CR+
Sbjct: 197 KPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYGMQTGC 256
Query: 373 -----RQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKIC 427
R+ EA + EM+F+G+ P N + C+ + D+ +KG +
Sbjct: 257 RKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVP 316
Query: 428 NEGIWDVVLSMVCKPEKVPESFELLDAL 455
N+ ++ + ++ + E++ +
Sbjct: 317 NQVTYNSFIRYYSVTNEIEGAIEMMRTM 344
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 1/140 (0%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
PD TYN LI C RA ELF++M+++G P+Q T+ + I + + A E
Sbjct: 280 VPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIE 339
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
+ M + + YT LI + + + A + EMV+ GL Y + +AL
Sbjct: 340 MMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDAL 399
Query: 267 FKAGKKEEALRVLEE-MREG 285
G L + MREG
Sbjct: 400 SSEGLASTLDEELHKRMREG 419
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 119/263 (45%), Gaps = 7/263 (2%)
Query: 99 RAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILI 157
+ + L SF ++ ++ L+H + V + + + G PD T L+
Sbjct: 369 KVAEGVLDEKSFNA--SISDYSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALV 426
Query: 158 RASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKL 217
G+ +RA E F+ ++S G+RPD+ + +I + + L +EM + +L
Sbjct: 427 HMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGKPKLGERLMKEM-QAKEL 485
Query: 218 EGCVTIYTNLIKGVCKIGELSWAFRIKDEM-VKKGLKLDAALYNTLINALFKAGKKEEAL 276
+ +Y L++ ++G+ + A I M L Y+ + A KAG+ ++A
Sbjct: 486 KASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAK 545
Query: 277 RVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWL 334
+EMR+ G + + ++ Y EN+ ++A R+L +E G++ VI Y V + W+
Sbjct: 546 SNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWM 605
Query: 335 CKEGKWSEAMDLFHDMPRRGCAP 357
G EA L + + G AP
Sbjct: 606 ANLGLIEEAEQLLVKISQLGEAP 628
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 127/295 (43%), Gaps = 24/295 (8%)
Query: 83 LLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARA 142
L C +I YA+ Q A + F + + + + TL+ +A +L
Sbjct: 216 LSCSIIDAYAKCGQMESAKRCFDEMTV----KDIHIWTTLISGYAKLGDMEAAEKLFC-- 269
Query: 143 GEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLR 202
E + ++ LI +G +RA +LF +M + GV+P+Q TF + + + LR
Sbjct: 270 -EMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLR 328
Query: 203 EAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWA---FRIKDEMVKKGLKLDAALY 259
E+ M R + I ++LI K G L + FRI D+ K D +
Sbjct: 329 HGKEIHGYMIRTNVRPNAIVI-SSLIDMYSKSGSLEASERVFRICDD------KHDCVFW 381
Query: 260 NTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV-- 317
NT+I+AL + G +ALR+L++M + + N T V++ EE R + +
Sbjct: 382 NTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTV 441
Query: 318 -EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCR 371
G+ PD Y + L + G + E M +MP PD + + G+CR
Sbjct: 442 QHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEMPFE---PDKHIWNAIL-GVCR 492
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/412 (18%), Positives = 163/412 (39%), Gaps = 34/412 (8%)
Query: 55 LGRAKMLPEMEQVLHQLHLDTRH--RVPEPLLCHVITFYA--RARQPSRAVQTFLSIPSF 110
L + E+ Q + +L T+ R+P LL ++ ++ + + + L I F
Sbjct: 18 LSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGF 77
Query: 111 RCQRTLKSFNTLLHALLTC-RQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRA 169
+ TL S N L+ + C + DA + + ++N ++ G RA
Sbjct: 78 KRPNTLLS-NHLIGMYMKCGKPIDACKVF----DQMHLRNLYSWNNMVSGYVKSGMLVRA 132
Query: 170 FELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIK 229
+FD M R D ++ T++ ++ L EA +E FR ++ + L+
Sbjct: 133 RVVFDSMPER----DVVSWNTMVIGYAQDGNLHEALWFYKE-FRRSGIKFNEFSFAGLLT 187
Query: 230 GVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCE- 288
K +L + +++ G + L ++I+A K G+ E A R +EM
Sbjct: 188 ACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHI 247
Query: 289 WNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFH 348
W + +I Y + + E A ++ E + + + + + ++G + A+DLF
Sbjct: 248 WTT-----LISGYAKLGDMEAAEKLF--CEMPEKNPVSWTALIAGYVRQGSGNRALDLFR 300
Query: 349 DMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEG 408
M G P+ T+ + R + M+ P + +++ + + G
Sbjct: 301 KMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSG 360
Query: 409 NFELLSTVLSDLTSKGKICNEG----IWDVVLSMVCKPEKVPESFELLDALV 456
+ E V +IC++ W+ ++S + + ++ +LD ++
Sbjct: 361 SLEASERVF-------RICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMI 405
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 124/292 (42%), Gaps = 30/292 (10%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
D YN+L++ G D A ++FD M R V T+ +LI L + R+ E F L
Sbjct: 270 DQVVYNVLLKLYMESGLFDDARKVFDGMSERNV----VTWNSLISVLSKKVRVHEMFNLF 325
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
+M E T+ T ++ ++ L I +++K K D L N+L++ K
Sbjct: 326 RKMQEEMIGFSWATL-TTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGK 384
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIG 326
G+ E + RV + M + + N+M+ Y N EE + + + GV PD I
Sbjct: 385 CGEVEYSRRVFDVMLTK----DLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGIT 440
Query: 327 YNVFLGWLCKEGKWSEAMDLFHDMPRR-GCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
+ L G + LF M +P + Y L D L R + +EAV V++ M
Sbjct: 441 FVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETM 500
Query: 386 MFKGYAPLSKNL--------NAFVSELCQE----------GNFELLSTVLSD 419
FK A + +L N V E+ + GN+ ++S + +D
Sbjct: 501 PFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYAD 552
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF--- 205
+ TY LI+ G D A E+F EM S GV PD T+ L+ LC+N +L +A
Sbjct: 15 NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAG 74
Query: 206 --ELKEEMFREFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYN 260
E ++F L+G V YT +I G CK G A+ + +M + G D+ YN
Sbjct: 75 KVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYN 134
Query: 261 TLINALFKAGKKEEALRVLEEMR 283
TLI A + G K + +++EMR
Sbjct: 135 TLIRAHLRDGDKAASAELIKEMR 157
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 42/173 (24%)
Query: 246 EMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCREN 305
EM ++GL + Y TLI LF+AG + A + +EM
Sbjct: 6 EMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVS--------------------- 44
Query: 306 NFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAM---------DLFHDMPRRGCA 356
+GV PD++ YN+ L LCK GK +A+ DLF + +G
Sbjct: 45 ------------DGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVK 92
Query: 357 PDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGN 409
P+VVTY T+ G C+ EA + +M G P S N + ++G+
Sbjct: 93 PNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGD 145
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 86/181 (47%), Gaps = 20/181 (11%)
Query: 210 EMFREFKLEGCV---TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
E+FRE G V YT LI+G+ + G+ A I EMV G+ D YN L++ L
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 267 FKAGKKEEALRVLEEMREG----------GCEWNSVTCNVMIGEYCRENNFEEAYRILDG 316
K GK E+AL V ++ +G G + N VT MI +C++ EEAY +
Sbjct: 62 CKNGKLEKAL-VAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 317 V--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGC--APDVVTYRTLFDGLCRW 372
+ +G PD YN + ++G + + +L +M R C A D TY + D L
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM--RSCRFAGDASTYGLVTDMLHDG 178
Query: 373 R 373
R
Sbjct: 179 R 179
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 16/149 (10%)
Query: 170 FELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC---VTIYTN 226
ELF EM RG+ + T+ TLI L + ++ +E+F+E +G + Y
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDC----DMAQEIFKEMVSDGVPPDIMTYNI 56
Query: 227 LIKGVCKIGELSWAF---RIKD------EMVKKGLKLDAALYNTLINALFKAGKKEEALR 277
L+ G+CK G+L A +++D + KG+K + Y T+I+ K G KEEA
Sbjct: 57 LLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYT 116
Query: 278 VLEEMREGGCEWNSVTCNVMIGEYCRENN 306
+ +M+E G +S T N +I + R+ +
Sbjct: 117 LFRKMKEDGPLPDSGTYNTLIRAHLRDGD 145
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 9/143 (6%)
Query: 319 GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREA 378
G+ + + Y + L + G A ++F +M G PD++TY L DGLC+ + +A
Sbjct: 11 GLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKA 70
Query: 379 VV---------VLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNE 429
+V + + KG P +S C++G E T+ + G + +
Sbjct: 71 LVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDS 130
Query: 430 GIWDVVLSMVCKPEKVPESFELL 452
G ++ ++ + S EL+
Sbjct: 131 GTYNTLIRAHLRDGDKAASAELI 153
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 131/313 (41%), Gaps = 19/313 (6%)
Query: 153 YNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMF 212
Y I+ + G A A E+ +EM+ +G+ + LI E RE + E++F
Sbjct: 251 YTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAE---AREVV-ITEKLF 306
Query: 213 REF---KL----EGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
+E KL E C+ + ++ G + + M K LK+ + ++N
Sbjct: 307 KEAGGKKLLKDPEMCLKVVLMYVRE----GNMETTLEVVAAMRKAELKVTDCILCAIVNG 362
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPD 323
K EA++V E + CE VT + I YCR + +A + D + +G
Sbjct: 363 FSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKC 422
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
V+ Y+ + K + S+A+ L M +RGC P++ Y +L D R R A +
Sbjct: 423 VVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWK 482
Query: 384 EMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDL-TSKGKICNEGIWDVVLSMVCKP 442
EM P + + +S + E + + ++GKI + + +++ + K
Sbjct: 483 EMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKI-DRAMAGIMVGVFSKT 541
Query: 443 EKVPESFELLDAL 455
++ E LL +
Sbjct: 542 SRIDELMRLLQDM 554
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 128/302 (42%), Gaps = 21/302 (6%)
Query: 48 YDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLC-HVITFYARARQPSRAVQTFLS 106
Y ++I A+ + E++ + + + +P +C V+ Y R ++T L
Sbjct: 286 YSMLIRAFAEAREVVITEKLFKEA--GGKKLLKDPEMCLKVVLMYVREGN----METTLE 339
Query: 107 IPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDAC-----TYNILIRASC 161
+ + + LK + +L A++ A + E+ + C TY I I A C
Sbjct: 340 VVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYC 399
Query: 162 LRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC- 220
++A LFDEM +G + ++ + RL +A L +M K GC
Sbjct: 400 RLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKM----KQRGCK 455
Query: 221 --VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
+ IY +LI + +L A +I EM + + D Y ++I+A ++ + E + +
Sbjct: 456 PNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVEL 515
Query: 279 LEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDG--VEGVKPDVIGYNVFLGWLCK 336
+E R + + +M+G + + + +E R+L VEG + D Y+ L L
Sbjct: 516 YQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRD 575
Query: 337 EG 338
G
Sbjct: 576 AG 577
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 119/271 (43%), Gaps = 12/271 (4%)
Query: 170 FELFDEMR-SRGVRPDQATFGTLIH---RLCENSRLREAFELKEEMFREFKLEGCVTIYT 225
++FD ++ S GV P + ++ ++ EN ++ E F+ + F + +IYT
Sbjct: 193 IQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYT 252
Query: 226 NLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREG 285
+ + K G A + +EM KG+ + LY+ LI A +A + ++ +E
Sbjct: 253 IVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGK 312
Query: 286 GCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVK---PDVIGYNVFLGWLCKEGKWSE 342
+ C ++ Y RE N E ++ + + D I + G+ + G ++E
Sbjct: 313 KLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRG-FAE 371
Query: 343 AMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVS 402
A+ ++ + C VTY + CR ++ +A ++ DEM+ KG+ K + A+ +
Sbjct: 372 AVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGF---DKCVVAYSN 428
Query: 403 ELCQEGNFELLSTVLSDLTS-KGKICNEGIW 432
+ G LS + + K + C IW
Sbjct: 429 IMDMYGKTRRLSDAVRLMAKMKQRGCKPNIW 459
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/236 (20%), Positives = 101/236 (42%), Gaps = 8/236 (3%)
Query: 119 FNTLLHALLTCRQFDAVTELAARAGE---FGAPDACTYNILIRASCLRGHADRAFELFDE 175
++ L+ A R+ +L AG P+ C +L+ G+ + E+
Sbjct: 286 YSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVR--EGNMETTLEVVAA 343
Query: 176 MRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIG 235
MR ++ +++ + EA ++ E +E G VT Y I C++
Sbjct: 344 MRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVT-YAIAINAYCRLE 402
Query: 236 ELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCN 295
+ + A + DEMVKKG Y+ +++ K + +A+R++ +M++ GC+ N N
Sbjct: 403 KYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYN 462
Query: 296 VMIGEYCRENNFEEAYRILDGVEGVK--PDVIGYNVFLGWLCKEGKWSEAMDLFHD 349
+I + R + A +I ++ K PD + Y + + + ++L+ +
Sbjct: 463 SLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQE 518
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 161/361 (44%), Gaps = 15/361 (4%)
Query: 39 RPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPS 98
R F HS S D ++ LGR + ++ ++L + R + + V+ A+
Sbjct: 102 RGFYHSSFSLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVR 161
Query: 99 RAVQTFLS----IPSFRCQRTLKSFNTLLHALLTCRQF-DAVTELAARAGEFGAPDACTY 153
+ V++F +P F FN LL L + DA + +F PD T+
Sbjct: 162 QTVESFWKFKRLVPDFF---DTACFNALLRTLCQEKSMTDARNVYHSLKHQF-QPDLQTF 217
Query: 154 NILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFR 213
NIL+ ++ A F+EM+ +G++PD T+ +LI C++ + +A++L ++M
Sbjct: 218 NILLSGW---KSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMRE 274
Query: 214 EFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKE 273
E + +T YT +I G+ IG+ A + EM + G D A YN I A +
Sbjct: 275 EEETPDVIT-YTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLG 333
Query: 274 EALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVK--PDVIGYNVFL 331
+A ++++EM + G N+ T N+ N+ ++ + + G + P+ +
Sbjct: 334 DADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLI 393
Query: 332 GWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYA 391
+ K AM L+ DM +G + L D LC + EA L EM+ KG+
Sbjct: 394 KMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHR 453
Query: 392 P 392
P
Sbjct: 454 P 454
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 2/198 (1%)
Query: 254 LDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRI 313
D A +N L+ L + +A V ++ + + T N+++ + E +
Sbjct: 178 FDTACFNALLRTLCQEKSMTDARNVYHSLKHQ-FQPDLQTFNILLSGWKSSEEAEAFFEE 236
Query: 314 LDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWR 373
+ G +G+KPDV+ YN + CK+ + +A L M PDV+TY T+ GL
Sbjct: 237 MKG-KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIG 295
Query: 374 QFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWD 433
Q +A VL EM G P NA + C ++ ++ KG N ++
Sbjct: 296 QPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYN 355
Query: 434 VVLSMVCKPEKVPESFEL 451
+ ++ + S+EL
Sbjct: 356 LFFRVLSLANDLGRSWEL 373
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 95/251 (37%), Gaps = 39/251 (15%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARA-GEFGAPDACTYNILIRASCLRGHADRAFELFDEM 176
++N+L+ R+ + +L + E PD TY +I L G D+A E+ EM
Sbjct: 248 TYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEM 307
Query: 177 RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGE 236
+ G PD A + I C RL +A +L
Sbjct: 308 KEYGCYPDVAAYNAAIRNFCIARRLGDADKL----------------------------- 338
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
DEMVKKGL +A YN L A + + M C N+ +C
Sbjct: 339 -------VDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMF 391
Query: 297 MIGEYCRENNFEEAYRILDG--VEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
+I + R + A R+ + V+G + +V L LC K EA +M +G
Sbjct: 392 LIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKG 451
Query: 355 CAPDVVTYRTL 365
P V+++ +
Sbjct: 452 HRPSNVSFKRI 462
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 119/282 (42%), Gaps = 32/282 (11%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P+ T++ LI A G ++A LF+EM + G P+ F L+H E + AF L
Sbjct: 407 PNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRL 466
Query: 208 ---------KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKG-----LK 253
E ++ + + T N++K G S R + + K
Sbjct: 467 FQSWKGSSVNESLYADDIVSKGRTSSPNILKNN---GPGSLVNRNSNSPYIQASKRFCFK 523
Query: 254 LDAALYNTLINAL---FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA 310
A YN L+ A + GK+ +++EM+ G N +T + +I + E A
Sbjct: 524 PTTATYNILLKACGTDYYRGKE-----LMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGA 578
Query: 311 YRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSE-AMDLFHDMPRRGCAPDVVTYRTLFD 367
RIL + G +PDV+ Y + +C E K + A LF +M R P+ VTY TL
Sbjct: 579 VRILRTMHSAGTRPDVVAYTTAIK-ICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLK 637
Query: 368 GLCRWR---QFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQ 406
++ + R+ + + +M GY P L + E C+
Sbjct: 638 ARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWCE 679
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/293 (22%), Positives = 114/293 (38%), Gaps = 54/293 (18%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
D +YNIL++ CL G D A +++ E + R+ + LK
Sbjct: 334 DMTSYNILLKTCCLAGRVDLAQDIYKEAK----------------------RMESSGLLK 371
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
+ F Y +IK WA ++KD+M G+ + +++LI+A
Sbjct: 372 LDAF----------TYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACAN 421
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYN 328
AG E+A + EEM GCE NS N+++ ++ A+R+ +G + +
Sbjct: 422 AGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSS---VNES 478
Query: 329 VFLGWLCKEGKWSEAMDLFHDMP----------------RRGC-APDVVTYRTLFDGLCR 371
++ + +G+ S L ++ P +R C P TY L C
Sbjct: 479 LYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFCFKPTTATYNILLKA-CG 537
Query: 372 WRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
+R ++DEM G +P + + G+ E +L + S G
Sbjct: 538 TDYYR-GKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAG 589
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 87/190 (45%), Gaps = 13/190 (6%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P TYNIL++A + R EL DEM+S G+ P+Q T+ TLI +C S E
Sbjct: 524 PTTATYNILLKACGTDYY--RGKELMDEMKSLGLSPNQITWSTLID-MCGGS---GDVEG 577
Query: 208 KEEMFREFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLIN 264
+ R G V YT IK + L AF + +EM + +K + YNTL+
Sbjct: 578 AVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLK 637
Query: 265 ALFKAG---KKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVK 321
A K G + + L + ++MR G + N +I E+C E +E + D + +
Sbjct: 638 ARSKYGSLLEVRQCLAIYQDMRNAGYKPNDHFLKELIEEWC-EGVIQENGQSQDKISDQE 696
Query: 322 PDVIGYNVFL 331
D G V L
Sbjct: 697 GDNAGRPVSL 706
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 133/315 (42%), Gaps = 6/315 (1%)
Query: 83 LLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAAR- 141
+ +I + +QP +A + F + + C + + L+ A +FDA L R
Sbjct: 152 IYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERM 211
Query: 142 -AGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSR 200
+ PD TY+ILI++ D+ +L +MR +G+RP+ T+ TLI +
Sbjct: 212 KSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKM 271
Query: 201 LREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYN 260
E +M E + + ++ G++ ++ G++ + +N
Sbjct: 272 FVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFN 331
Query: 261 TLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA---YRILDGV 317
L+++ K+G ++ V+E M++ W VT NV+I + R + ++ +R++
Sbjct: 332 ILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQS- 390
Query: 318 EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFRE 377
E + P + + + K + + + D+V + L D R +F E
Sbjct: 391 ERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAE 450
Query: 378 AVVVLDEMMFKGYAP 392
VL+ M KG+ P
Sbjct: 451 MKGVLELMEKKGFKP 465
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 97/211 (45%), Gaps = 7/211 (3%)
Query: 233 KIGELSWAFRIKD-EMVKKGL--KLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEW 289
+I L W I+ E++++ L K + +Y LI L K + E+A + +EM GC
Sbjct: 124 RITALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVV 183
Query: 290 NSVTCNVMIGEYCRENNFEEAYRILDGVEGV---KPDVIGYNVFLGWLCKEGKWSEAMDL 346
N ++ Y R F+ A+ +L+ ++ +PDV Y++ + + + + DL
Sbjct: 184 NHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDL 243
Query: 347 FHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGY-APLSKNLNAFVSELC 405
DM R+G P+ +TY TL D + + F E L +M+ + P S +N+ +
Sbjct: 244 LSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFG 303
Query: 406 QEGNFELLSTVLSDLTSKGKICNEGIWDVVL 436
G E++ S G N ++++L
Sbjct: 304 GNGQIEMMENCYEKFQSSGIEPNIRTFNILL 334
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 109/264 (41%), Gaps = 14/264 (5%)
Query: 158 RASCLRGHADRAFELFDEMRSR-GVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFK 216
R + LR + A ++F+ +R + +P+ + LI L + + +A EL +EM E
Sbjct: 124 RITALRWES--AIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQEMINE-- 179
Query: 217 LEGCVT---IYTNLIKGVCKIGELSWAFRIKDEM-VKKGLKLDAALYNTLINALFKAGKK 272
GCV +YT L+ + G AF + + M + D Y+ LI + +
Sbjct: 180 --GCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAF 237
Query: 273 EEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILD---GVEGVKPDVIGYNV 329
++ +L +MR G N++T N +I Y + F E L G + KPD N
Sbjct: 238 DKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNS 297
Query: 330 FLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKG 389
L G+ + + G P++ T+ L D + +++ V++ M
Sbjct: 298 TLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYH 357
Query: 390 YAPLSKNLNAFVSELCQEGNFELL 413
Y+ N + + G+ + +
Sbjct: 358 YSWTIVTYNVVIDAFGRAGDLKQM 381
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 86/185 (46%), Gaps = 6/185 (3%)
Query: 191 LIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKK 250
++ LC + L + F EF + Y +I+ G+L+ A + EM
Sbjct: 135 IVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCV 194
Query: 251 GLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA 310
GL D Y ++IN AGK ++A R+ +EM + C NSVT + ++ C+ + E A
Sbjct: 195 GLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERA 254
Query: 311 YRIL------DGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRT 364
+L DG + P+ + Y + + C++ + EA+ + M RGC P+ VT
Sbjct: 255 LELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACV 314
Query: 365 LFDGL 369
L G+
Sbjct: 315 LIQGV 319
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 127/329 (38%), Gaps = 38/329 (11%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
V+T +A A+ P F ++N ++ + L G
Sbjct: 136 VLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVG 195
Query: 147 A-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
PD TY +I C G D A+ L EM + T+ ++ +C++ + A
Sbjct: 196 LYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERAL 255
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
EL EM +E +G I N A Y +I A
Sbjct: 256 ELLAEMEKE---DGGGLISPN-----------------------------AVTYTLVIQA 283
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMI-GEYCRENNFEEAYRILDGVEGVKPDV 324
+ + EEAL VL+ M GC N VT V+I G + + + +++D + +
Sbjct: 284 FCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVS 343
Query: 325 IG--YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVL 382
+ ++ L + +W EA +F M RG PD + +F LC ++ + ++
Sbjct: 344 LSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLY 403
Query: 383 DEMMFKGY-APLSKNLNA-FVSELCQEGN 409
E+ K + + +++A + LCQ+GN
Sbjct: 404 QEIEKKDVKSTIDSDIHAVLLLGLCQQGN 432
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 89/206 (43%), Gaps = 6/206 (2%)
Query: 256 AALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILD 315
A +Y + L K + V+E R+ C N T +++ + N +EA +L
Sbjct: 95 AYMYTKACDILKIRAKPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLR 154
Query: 316 GVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWR 373
V D + YN+ + +G + A L +M G PDV+TY ++ +G C
Sbjct: 155 KFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAG 214
Query: 374 QFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSK---GKIC-NE 429
+ +A + EM S + + +C+ G+ E +L+++ + G I N
Sbjct: 215 KIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNA 274
Query: 430 GIWDVVLSMVCKPEKVPESFELLDAL 455
+ +V+ C+ +V E+ +LD +
Sbjct: 275 VTYTLVIQAFCEKRRVEEALLVLDRM 300
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 121/296 (40%), Gaps = 23/296 (7%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRL--CENSRLREAF 205
PD YN ++ A R + AF + +++ RG +P T+G ++ + CE +
Sbjct: 591 PDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEK------Y 644
Query: 206 ELKEEMFREFKLEGC--VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLI 263
L E FR+ + Y L+ + K G+ A ++M +G+ AALY L
Sbjct: 645 NLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLA 704
Query: 264 NALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGV-KP 322
L AG+ E L +L+++ + VT +I N + A I D ++ V P
Sbjct: 705 RCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMKKVCSP 764
Query: 323 DVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG------------CAPDVVTYRTLFDGLC 370
+++ N+ L + G + EA +LF M G PD T+ T+ D
Sbjct: 765 NLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCA 824
Query: 371 RWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKI 426
++ + EM+ GY +K V E + G E++ + +I
Sbjct: 825 EQEKWDDFGYAYREMLRHGYHFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNRI 880
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 95/251 (37%), Gaps = 51/251 (20%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMR 177
++ ++ +L C +++ V E + + P+A Y +L+ G +D A ++M
Sbjct: 630 TYGLIMEVMLACEKYNLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDME 689
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGEL 237
SRG+ A + L LC R E N++K +C++
Sbjct: 690 SRGIVGSAALYYDLARCLCSAGRCNEGL--------------------NMLKKICRVAN- 728
Query: 238 SWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVM 297
K Y LI A +G + A + ++M++ C N VTCN+M
Sbjct: 729 ---------------KPLVVTYTGLIQACVDSGNIKNAAYIFDQMKK-VCSPNLVTCNIM 772
Query: 298 IGEYCRENNFEEAYRIL--------------DGVEGVKPDVIGYNVFLGWLCKEGKWSEA 343
+ Y + FEEA + D V PD +N L ++ KW +
Sbjct: 773 LKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDF 832
Query: 344 MDLFHDMPRRG 354
+ +M R G
Sbjct: 833 GYAYREMLRHG 843
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 12/182 (6%)
Query: 252 LKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT----CNVMIGEYCRENNF 307
L+ D +YN ++NA + + E A VL+++++ G + + VT VM+ C + N
Sbjct: 589 LEPDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLA--CEKYNL 646
Query: 308 -EEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLF 366
E +R + + P+ + Y V + L KEGK EA+ DM RG Y L
Sbjct: 647 VHEFFRKMQ--KSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLA 704
Query: 367 DGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKI 426
LC + E + +L ++ PL + GN + + + + K+
Sbjct: 705 RCLCSAGRCNEGLNMLKKICRVANKPLVVTYTGLIQACVDSGNIKNAAYIFDQMK---KV 761
Query: 427 CN 428
C+
Sbjct: 762 CS 763
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 124/299 (41%), Gaps = 48/299 (16%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
+A +N L+ G + A LF +MR +GV P + T T + + E +
Sbjct: 238 NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSH 297
Query: 209 E-EMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+ +L+ + T+L+ CK+G + +A + D M +K D +N +I+
Sbjct: 298 AIAIVNGMELDNILG--TSLLNFYCKVGLIEYAEMVFDRMFEK----DVVTWNLIISGYV 351
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTC-----------NVMIGE----YCRENNFE---- 308
+ G E+A+ + + MR +++ VT N+ +G+ YC ++FE
Sbjct: 352 QQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIV 411
Query: 309 ----------------EAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPR 352
+A ++ D V+ D+I +N L + G EA+ LF+ M
Sbjct: 412 LASTVMDMYAKCGSIVDAKKVFDST--VEKDLILWNTLLAAYAESGLSGEALRLFYGMQL 469
Query: 353 RGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP----LSKNLNAFVSELCQE 407
G P+V+T+ + L R Q EA + +M G P + +N V C E
Sbjct: 470 EGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSE 528
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 108/252 (42%), Gaps = 43/252 (17%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
D T+N++I +G + A + MR ++ D T TL+ L+ E++
Sbjct: 339 DVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQ 398
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
R E + + + ++ K G + A ++ D V+K D L+NTL+ A +
Sbjct: 399 CYCIRH-SFESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEK----DLILWNTLLAAYAE 453
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYN 328
+G EALR+ M+ +EGV P+VI +N
Sbjct: 454 SGLSGEALRLFYGMQ---------------------------------LEGVPPNVITWN 480
Query: 329 VFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFK 388
+ + L + G+ EA D+F M G P+++++ T+ +G+ + EA++ L +M
Sbjct: 481 LIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQES 540
Query: 389 GYAPLSKNLNAF 400
G P NAF
Sbjct: 541 GLRP-----NAF 547
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 160/378 (42%), Gaps = 39/378 (10%)
Query: 83 LLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALL-TCRQFDAVTELAAR 141
L V+ YA+ A + F S ++ L +NTLL A + +A+
Sbjct: 412 LASTVMDMYAKCGSIVDAKKVFDS----TVEKDLILWNTLLAAYAESGLSGEALRLFYGM 467
Query: 142 AGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRL 201
E P+ T+N++I + G D A ++F +M+S G+ P+ ++ T+++ + +N
Sbjct: 468 QLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCS 527
Query: 202 REAF----ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAA 257
EA +++E R V + IG + I++ + ++
Sbjct: 528 EEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIET- 586
Query: 258 LYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV-TCNVMIGEYCRENNFEEA---YRI 313
+L++ K G +A +V G ++ + N MI Y N +EA YR
Sbjct: 587 ---SLVDMYAKCGDINKAEKVF-----GSKLYSELPLSNAMISAYALYGNLKEAIALYRS 638
Query: 314 LDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM-PRRGCAPDVVTYRTLFDGLCRW 372
L+GV G+KPD I L G ++A+++F D+ +R P + Y + D L
Sbjct: 639 LEGV-GLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASA 697
Query: 373 RQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDL------------ 420
+ +A+ +++EM FK P ++ + + V+ ++ EL+ + L
Sbjct: 698 GETEKALRLIEEMPFK---PDARMIQSLVASCNKQRKTELVDYLSRKLLESEPENSGNYV 754
Query: 421 TSKGKICNEGIWDVVLSM 438
T EG WD V+ M
Sbjct: 755 TISNAYAVEGSWDEVVKM 772
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 10/165 (6%)
Query: 217 LEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEAL 276
LE CV + ++L K G L A ++ DE+ + +A +N L+ + GK EEA+
Sbjct: 204 LEDCVFVASSLADMYGKCGVLDDASKVFDEIPDR----NAVAWNALMVGYVQNGKNEEAI 259
Query: 277 RVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYR--ILDGVEGVKPDVIGYNVFLGWL 334
R+ +MR+ G E VT + + EE + + V G++ D I L +
Sbjct: 260 RLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFY 319
Query: 335 CKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAV 379
CK G A +F M + DVVT+ + G + +A+
Sbjct: 320 CKVGLIEYAEMVFDRMFEK----DVVTWNLIISGYVQQGLVEDAI 360
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 110/273 (40%), Gaps = 35/273 (12%)
Query: 152 TYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM 211
+N +I A +G+ A + F M GVRP+ AT G L+ +N + EA E
Sbjct: 212 VFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEA-EFAFSH 270
Query: 212 FREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGK 271
R+F + C + Y+++I ++ A + D M + ++L + ++NA + GK
Sbjct: 271 MRKFGIV-CESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGK 329
Query: 272 KEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFL 331
E A +L M G P++I YN +
Sbjct: 330 MELAESILVSMEAA---------------------------------GFSPNIIAYNTLI 356
Query: 332 GWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYA 391
K K A LFH + G PD +YR++ +G R + EA E+ GY
Sbjct: 357 TGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYK 416
Query: 392 PLSKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
P S NL ++ + G+ + + D+T G
Sbjct: 417 PNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIG 449
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 107/266 (40%), Gaps = 9/266 (3%)
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFGAP-DACTYNILIRASCLRGHADRAFELFDEMR 177
F +L C D + L R + G + YN +I D F+EM
Sbjct: 632 FRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMI 691
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTI--YTNLIKGVCKIG 235
G P+ TF L+ + + F+ E+F K G V + Y +I K
Sbjct: 692 RYGFTPNTVTFNVLLDVYGK----AKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNK 747
Query: 236 ELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCN 295
+ + M G + YNTL++A K + E+ +L+ M++ + T N
Sbjct: 748 DYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYN 807
Query: 296 VMIGEYCRENNFEEAYRILDGVE--GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRR 353
+MI Y + +E +L ++ G+ PD+ YN + G EA+ L +M R
Sbjct: 808 IMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGR 867
Query: 354 GCAPDVVTYRTLFDGLCRWRQFREAV 379
PD VTY L L R +F EA+
Sbjct: 868 NIIPDKVTYTNLVTALRRNDEFLEAI 893
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 112/271 (41%), Gaps = 3/271 (1%)
Query: 156 LIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREF 215
+I + G A +L+ ++S GV D+ F ++ + L EA + E M +
Sbjct: 564 MIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQK 623
Query: 216 KLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEA 275
+ V ++ ++++ K + + K G+ + +YN +IN +A +E
Sbjct: 624 DIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDEL 683
Query: 276 LRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRI--LDGVEGVKPDVIGYNVFLGW 333
EEM G N+VT NV++ Y + F++ + L GV DVI YN +
Sbjct: 684 SGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAA 742
Query: 334 LCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPL 393
K ++ +M G + + Y TL D + +Q + +L M P
Sbjct: 743 YGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPD 802
Query: 394 SKNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
N ++ ++G + ++ VL +L G
Sbjct: 803 HYTYNIMINIYGEQGWIDEVADVLKELKESG 833
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 97/210 (46%), Gaps = 10/210 (4%)
Query: 41 FRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCH-VITFYARARQPSR 99
F + +++++++ G+AK+ ++ ++ L RH V + + + +I Y + + +
Sbjct: 695 FTPNTVTFNVLLDVYGKAKLFKKVNELFL---LAKRHGVVDVISYNTIIAAYGKNKDYTN 751
Query: 100 AVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGE-FGAPDACTYNILIR 158
++ +L+++NTLL A +Q + + R + PD TYNI+I
Sbjct: 752 MSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMIN 811
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLE 218
+G D ++ E++ G+ PD ++ TLI + EA L +EM +
Sbjct: 812 IYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIP 871
Query: 219 GCVTIYTNLIKGVCKIGE----LSWAFRIK 244
VT YTNL+ + + E + W+ +K
Sbjct: 872 DKVT-YTNLVTALRRNDEFLEAIKWSLWMK 900
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 98/253 (38%), Gaps = 8/253 (3%)
Query: 63 EMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTL 122
+++ + +++ H E C VI ARA TF + + +FN L
Sbjct: 647 KLQHLYYRIRKSGIHWNQEMYNC-VINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVL 705
Query: 123 LHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVR 182
L + F V EL A G D +YN +I A M+ G
Sbjct: 706 LDVYGKAKLFKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFS 765
Query: 183 PDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFR 242
+ TL+ ++ ++ + + + M + G N++ + GE W
Sbjct: 766 VSLEAYNTLLDAYGKDKQMEKFRSILKRMKKS--TSGPDHYTYNIMINI--YGEQGWIDE 821
Query: 243 IKD---EMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIG 299
+ D E+ + GL D YNTLI A G EEA+ +++EMR + VT ++
Sbjct: 822 VADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVT 881
Query: 300 EYCRENNFEEAYR 312
R + F EA +
Sbjct: 882 ALRRNDEFLEAIK 894
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 104/269 (38%), Gaps = 10/269 (3%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
PD + ++R D+ L+ +R G+ +Q + +I+ L E
Sbjct: 626 VPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSG 685
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEM---VKKGLKLDAALYNTLI 263
EEM R VT N++ V +L F+ +E+ K+ +D YNT+I
Sbjct: 686 TFEEMIRYGFTPNTVTF--NVLLDVYGKAKL---FKKVNELFLLAKRHGVVDVISYNTII 740
Query: 264 NALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVK-- 321
A K ++ M+ G + N ++ Y ++ E+ IL ++
Sbjct: 741 AAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSG 800
Query: 322 PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVV 381
PD YN+ + ++G E D+ ++ G PD+ +Y TL EAV +
Sbjct: 801 PDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGL 860
Query: 382 LDEMMFKGYAPLSKNLNAFVSELCQEGNF 410
+ EM + P V+ L + F
Sbjct: 861 VKEMRGRNIIPDKVTYTNLVTALRRNDEF 889
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/419 (19%), Positives = 175/419 (41%), Gaps = 28/419 (6%)
Query: 42 RHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAV 101
R +L++ + + G + ++ + +L ++ V PLL YA S A
Sbjct: 139 RVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLL----YMYANVGCISDAK 194
Query: 102 QTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASC 161
+ F + R +N+L+ LL C + +L R E D+ ++ +I+
Sbjct: 195 KVFYGLD----DRNTVMYNSLMGGLLACGMIEDALQLF-RGME---KDSVSWAAMIKGLA 246
Query: 162 LRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCV 221
G A A E F EM+ +G++ DQ FG+++ + E ++ + R + +
Sbjct: 247 QNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRT-NFQDHI 305
Query: 222 TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEE 281
+ + LI CK L +A + D M +K + + ++ + G+ EEA+++ +
Sbjct: 306 YVGSALIDMYCKCKCLHYAKTVFDRMKQK----NVVSWTAMVVGYGQTGRAEEAVKIFLD 361
Query: 282 MREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGY----NVFLGWLCKE 337
M+ G + + T I ++ EE + + + +I Y N + K
Sbjct: 362 MQRSGIDPDHYTLGQAISACANVSSLEEGSQFHG--KAITSGLIHYVTVSNSLVTLYGKC 419
Query: 338 GKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNL 397
G ++ LF++M R D V++ + ++ + E + + D+M+ G P L
Sbjct: 420 GDIDDSTRLFNEMNVR----DAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTL 475
Query: 398 NAFVSELCQEGNFELLSTVLSDLTSK-GKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
+S + G E +TS+ G + + G + ++ + + ++ E+ ++ +
Sbjct: 476 TGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGM 534
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 112/257 (43%), Gaps = 21/257 (8%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
+ ++ ++ G A+ A ++F +M+ G+ PD T G I S L E +
Sbjct: 335 NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFH 394
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
+ L VT+ +L+ K G++ + R+ +EM + DA + +++A +
Sbjct: 395 GKAITS-GLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVR----DAVSWTAMVSAYAQ 449
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEA---YRILDGVEGVKPDVI 325
G+ E +++ ++M + G + + VT +I R E+ ++++ G+ P +
Sbjct: 450 FGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIG 509
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDG--------LCRWRQFRE 377
Y+ + + G+ EAM + MP PD + + TL + +W E
Sbjct: 510 HYSCMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLSACRNKGNLEIGKWAA--E 564
Query: 378 AVVVLDEMMFKGYAPLS 394
+++ LD GY LS
Sbjct: 565 SLIELDPHHPAGYTLLS 581
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 133/277 (48%), Gaps = 41/277 (14%)
Query: 117 KSFNTLLHALLTCRQFDAVT----ELAARAGEFGAPDACTYNILIRASCLRGHA-DRAFE 171
++++T++ +T ++ + V E+ A A E P YN +IR C R +RAF+
Sbjct: 109 EAYHTMIKQAITGKRNNFVETLIEEVIAGACEMSVP---LYNCIIRFCCGRKFLFNRAFD 165
Query: 172 LFDEM-RSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKG 230
++++M RS +PD T+ L+ L + R KL C +Y + ++
Sbjct: 166 VYNKMLRSDDSKPDLETYTLLLSSLLK---------------RFNKLNVCY-VYLHAVRS 209
Query: 231 VCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWN 290
+ K +M G+ D + N +I A K + +EA+RV +EM G E N
Sbjct: 210 LTK------------QMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPN 257
Query: 291 SVTCNVMIGEYCRENNFEEA---YRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLF 347
+ T + ++ C + + Y+ + V+G+ P+ Y V + L E + EA+++
Sbjct: 258 AYTYSYLVKGVCEKGRVGQGLGFYKEMQ-VKGMVPNGSCYMVLICSLSMERRLDEAVEVV 316
Query: 348 HDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDE 384
+DM +PD++TY T+ LCR + EA+ +++E
Sbjct: 317 YDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEE 353
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/285 (23%), Positives = 119/285 (41%), Gaps = 26/285 (9%)
Query: 16 LRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDT 75
LR+Q DP +A +F Q R ++H+ +Y +I + K +E ++ ++ +
Sbjct: 82 LRAQSDPDLALDIFRWTAQQ---RGYKHNHEAYHTMIKQAITGKRNNFVETLIEEV-IAG 137
Query: 76 RHRVPEPLLCHVITF-YARARQPSRAVQTF------------LSIPSFRCQRTLKSFNTL 122
+ PL +I F R +RA + L + LK FN L
Sbjct: 138 ACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKL 197
Query: 123 LHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVR 182
+ ++T+ G PD N++I+A D A +F EM G
Sbjct: 198 NVCYVYLHAVRSLTKQMKSNGVI--PDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSE 255
Query: 183 PDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCV---TIYTNLIKGVCKIGELSW 239
P+ T+ L+ +CE R+ + ++E +++G V + Y LI + L
Sbjct: 256 PNAYTYSYLVKGVCEKGRVGQGLGF----YKEMQVKGMVPNGSCYMVLICSLSMERRLDE 311
Query: 240 AFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMRE 284
A + +M+ L D YNT++ L + G+ EAL ++EE ++
Sbjct: 312 AVEVVYDMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKK 356
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 2/150 (1%)
Query: 119 FNTLLHALLTCRQFDAVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEMR 177
N ++ A C + D + +G+ P+A TY+ L++ C +G + + EM+
Sbjct: 226 LNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQ 285
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGEL 237
+G+ P+ + + LI L RL EA E+ +M L + Y ++ +C+ G
Sbjct: 286 VKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLAN-SLSPDMLTYNTVLTELCRGGRG 344
Query: 238 SWAFRIKDEMVKKGLKLDAALYNTLINALF 267
S A + +E K+ + Y TL++ ++
Sbjct: 345 SEALEMVEEWKKRDPVMGERNYRTLMDEVY 374
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 148/347 (42%), Gaps = 32/347 (9%)
Query: 41 FRHSLLSYDLIITKLGRAK-------MLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYAR 93
++HS ++Y+ + L R ++ EM+ + + LDT +V + +
Sbjct: 259 YQHSTVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQ--------FQK 310
Query: 94 ARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQ--FDAVTELAARAGEFGAP-DA 150
+R + V+ + + + +++ + LL L D V ++ + G
Sbjct: 311 SRMMAETVKLYEYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSK 370
Query: 151 CTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEE 210
Y+ + R+ G D A E+ MR+ G PD T+ L+ LC+ RL EA + ++
Sbjct: 371 AVYDGIHRSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQ 430
Query: 211 MFREFKLEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
M + +GC + +T LI+G CK EL A M++KG +D+ L + LI+
Sbjct: 431 M----EAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFV 486
Query: 268 KAGKKEEALRVLEEMREGGC--EWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVI 325
K E A L EM + W S T ++I + + EEA +L ++ K +
Sbjct: 487 IHNKFEGASIFLMEMVKNANVKPWQS-TYKLLIDKLLKIKKSEEALDLLQMMK--KQNYP 543
Query: 326 GY-NVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCR 371
Y F G+L K G +A F D+ +P Y + + R
Sbjct: 544 AYAEAFDGYLAKFGTLEDAKK-FLDVLSSKDSPSFAAYFHVIEAFYR 589
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 122/309 (39%), Gaps = 39/309 (12%)
Query: 151 CTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEE 210
TYN +R + + DEM++ G D T+ + + ++ + E +L E
Sbjct: 264 VTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEY 323
Query: 211 MFR-EFK--LEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
M FK ++ C ++ + G +L FR+ + G L A+Y+ + +L
Sbjct: 324 MMDGPFKPSIQDC-SLLLRYLSGSPN-PDLDLVFRVSRKYESTGKSLSKAVYDGIHRSLT 381
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGY 327
G+ +EA + + MR G E PD I Y
Sbjct: 382 SVGRFDEAEEITKAMRNAGYE---------------------------------PDNITY 408
Query: 328 NVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMF 387
+ + LCK + EA + M +GC PD+ T+ L G C+ + +A+ M+
Sbjct: 409 SQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKTWTILIQGHCKNNELDKALACFANMLE 468
Query: 388 KGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICN-EGIWDVVLSMVCKPEKVP 446
KG+ S L+ + FE S L ++ + + + +++ + K +K
Sbjct: 469 KGFDIDSNLLDVLIDGFVIHNKFEGASIFLMEMVKNANVKPWQSTYKLLIDKLLKIKKSE 528
Query: 447 ESFELLDAL 455
E+ +LL +
Sbjct: 529 EALDLLQMM 537
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 154/368 (41%), Gaps = 35/368 (9%)
Query: 89 TFYARARQPSRAVQTFLSIPSFRCQRT-LKSFNTLLHALLTCRQFDAVTELAARAGEFGA 147
F++ R +Q + P +C + +K +N + + + + + + R +
Sbjct: 36 NFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRMPRW-- 93
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
+ +YN +I G + A +LFDEM R D ++ +I N L +A EL
Sbjct: 94 -SSVSYNGMISGYLRNGEFELARKLFDEMPER----DLVSWNVMIKGYVRNRNLGKAREL 148
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
E M E V + ++ G + G + A + D M +K + +N L++A
Sbjct: 149 FEIM-----PERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEK----NDVSWNALLSAYV 199
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGY 327
+ K EEA +L + RE W V+ N ++G + ++ EA + D + DV+ +
Sbjct: 200 QNSKMEEAC-MLFKSRE---NWALVSWNCLLGGFVKKKKIVEARQFFDSMN--VRDVVSW 253
Query: 328 NVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMF 387
N + + GK EA LF + P DV T+ + G + R EA + D+M
Sbjct: 254 NTIITGYAQSGKIDEARQLFDESP----VQDVFTWTAMVSGYIQNRMVEEARELFDKMPE 309
Query: 388 KGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPE 447
+ + NA ++ Q E+ + + + N W+ +++ + K+ E
Sbjct: 310 RNEV----SWNAMLAGYVQGERMEMAKELFDVMPCR----NVSTWNTMITGYAQCGKISE 361
Query: 448 SFELLDAL 455
+ L D +
Sbjct: 362 AKNLFDKM 369
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/318 (20%), Positives = 136/318 (42%), Gaps = 23/318 (7%)
Query: 44 SLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQT 103
+L+S++ ++ + K + E Q +++ R V +IT YA++ + A Q
Sbjct: 218 ALVSWNCLLGGFVKKKKIVEARQFFDSMNV--RDVVSWNT---IITGYAQSGKIDEARQL 272
Query: 104 FLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLR 163
F P + + ++ ++ + R + EL + E + ++N ++
Sbjct: 273 FDESPV----QDVFTWTAMVSGYIQNRMVEEARELFDKMPE---RNEVSWNAMLAGYVQG 325
Query: 164 GHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTI 223
+ A ELFD M R V +T+ T+I + ++ EA L ++M + +
Sbjct: 326 ERMEMAKELFDVMPCRNV----STWNTMITGYAQCGKISEAKNLFDKMPKRDPVS----- 376
Query: 224 YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMR 283
+ +I G + G A R+ +M ++G +L+ + +++ ++ E ++ +
Sbjct: 377 WAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV 436
Query: 284 EGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEA 343
+GG E N ++ YC+ + EEA + + G D++ +N + + G A
Sbjct: 437 KGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAG--KDIVSWNTMIAGYSRHGFGEVA 494
Query: 344 MDLFHDMPRRGCAPDVVT 361
+ F M R G PD T
Sbjct: 495 LRFFESMKREGLKPDDAT 512
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 129/301 (42%), Gaps = 28/301 (9%)
Query: 120 NTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSR 179
N+L+ C +FD E A + A D ++N L+ GH A +F EM+ +
Sbjct: 324 NSLVSLYYKCGKFD---EARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK 380
Query: 180 GVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSW 239
+ ++ +I L EN E +L M RE E C ++ IK +G
Sbjct: 381 NI----LSWMIMISGLAENGFGEEGLKLFSCMKRE-GFEPCDYAFSGAIKSCAVLGAYCN 435
Query: 240 AFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIG 299
+ +++K G + N LI K G EEA +V M C +SV+ N +I
Sbjct: 436 GQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMP---C-LDSVSWNALIA 491
Query: 300 EYCRENNFEEAYRILDGV--EGVKPDVIGYNVFL------GWLCKEGKWSEAMDLFHDMP 351
+ + EA + + + +G++PD I L G + + K+ ++M+ + +P
Sbjct: 492 ALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIP 551
Query: 352 RRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFE 411
P Y L D LCR +F +A V++ + FK P ++ A +S GN E
Sbjct: 552 -----PGADHYARLIDLLCRSGKFSDAESVIESLPFK---PTAEIWEALLSGCRVHGNME 603
Query: 412 L 412
L
Sbjct: 604 L 604
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/365 (24%), Positives = 144/365 (39%), Gaps = 35/365 (9%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQ---RTLKSFNTLLHALLTCRQFDAVTELAARAG 143
+I Y QP RA+ F + R Q TL S ++L L R +V R G
Sbjct: 319 IIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKG 378
Query: 144 EFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLRE 203
F D N ++ G D A +F+ + + D ++ T+I +N E
Sbjct: 379 WF-LEDITIGNAVVVMYAKLGLVDSARAVFNWLPN----TDVISWNTIISGYAQNGFASE 433
Query: 204 AFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLI 263
A E+ M E ++ + +++ + G L ++ ++K GL LD + +L
Sbjct: 434 AIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLA 493
Query: 264 NALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVK 321
+ K G+ E+AL + ++ NSV N +I + + E+A + + EGVK
Sbjct: 494 DMYGKCGRLEDALSLFYQIPRV----NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVK 549
Query: 322 PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPR-RGCAPDVVTYRTLFDGLCRWRQFREAVV 380
PD I + L G E F M G P + Y + D R Q A+
Sbjct: 550 PDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALK 609
Query: 381 VLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVC 440
+ M + P + A +S GN +L GKI +E +++V
Sbjct: 610 FIKSMSLQ---PDASIWGALLSACRVHGNVDL-----------GKIASEHLFEV------ 649
Query: 441 KPEKV 445
+PE V
Sbjct: 650 EPEHV 654
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 83/198 (41%), Gaps = 40/198 (20%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
++ +N LI GH ++A LF EM GV+PD TF TL+ + + E
Sbjct: 516 NSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCF 575
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
E M ++ + + Y ++ + G+L A + M L+ DA+++ L++A
Sbjct: 576 EMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM---SLQPDASIWGALLSA--- 629
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYN 328
C V NV +G+ E+ FE V+P+ +GY+
Sbjct: 630 ------------------CR---VHGNVDLGKIASEHLFE-----------VEPEHVGYH 657
Query: 329 VFLGWL-CKEGKWSEAMD 345
V L + GKW E +D
Sbjct: 658 VLLSNMYASAGKW-EGVD 674
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 141/325 (43%), Gaps = 9/325 (2%)
Query: 48 YDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSI 107
Y+ I+ GR + E E++ + D H E +++ + R + A+ + +
Sbjct: 217 YNTAISLCGRINNVYETERIWRVMKGDG-HIGTEITYSLLVSIFVRCGRSELALDVYDEM 275
Query: 108 PSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHA 166
+ + + ++ A ++D ++ + G P+ N LI + G
Sbjct: 276 VNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKV 335
Query: 167 DRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVT--IY 224
F+++ ++S G +PD+ T+ L+ L + +R + +L + M R L C+ +Y
Sbjct: 336 GLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFD-MIRSENL-CCLNEYLY 393
Query: 225 TNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMRE 284
+ K+G A ++ EM GL + + YN +I+A K+ K + AL V E M +
Sbjct: 394 NTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQ 453
Query: 285 GGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAM 344
C+ N+ T ++ + ++E IL VE PDV YN + +C ++ A
Sbjct: 454 RDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVE---PDVSLYNAAIHGMCLRREFKFAK 510
Query: 345 DLFHDMPRRGCAPDVVTYRTLFDGL 369
+L+ M G PD T + L
Sbjct: 511 ELYVKMREMGLEPDGKTRAMMLQNL 535
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 121/274 (44%), Gaps = 8/274 (2%)
Query: 169 AFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLI 228
A ELFD MR G++P+ + + L N +++AF + E M ++ + G Y+ ++
Sbjct: 126 ALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFEFMRKKENVTG--HTYSLML 183
Query: 229 KGVCKIGELSWAFRIKDEMVKKGLK---LDAALYNTLINALFKAGKKEEALRVLEEMREG 285
K V ++ A R+ E+ ++ + D LYNT I+ + E R+ M+
Sbjct: 184 KAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGD 243
Query: 286 GCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDV--IGYNVFLGWLCKEGKWSEA 343
G +T ++++ + R E A + D + K + + KE KW A
Sbjct: 244 GHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLA 303
Query: 344 MDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSE 403
+ +F M ++G P++V TL + L + + V + G+ P NA ++
Sbjct: 304 LKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTA 363
Query: 404 LCQEGNFELLSTVLSDLTSKGKIC-NEGIWDVVL 436
L + +E + + + S+ C NE +++ +
Sbjct: 364 LYKANRYEDVLQLFDMIRSENLCCLNEYLYNTAM 397
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 115/277 (41%), Gaps = 34/277 (12%)
Query: 152 TYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM 211
TY++L+ G ++ A +++DEM + + + +I + + A ++ + M
Sbjct: 251 TYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSM 310
Query: 212 FREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGK 271
++ V T LI + K G++ F++ + G K D +N L+ AL+KA +
Sbjct: 311 LKKGMKPNLVACNT-LINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANR 369
Query: 272 KEEALRVLEEMR-EGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEG--VKPDVIGYN 328
E+ L++ + +R E C N N + + +E+A ++L +EG + YN
Sbjct: 370 YEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYN 429
Query: 329 VFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTL----------------------- 365
+ + K K A+ ++ M +R C P+ TY +L
Sbjct: 430 LVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILKKVEPD 489
Query: 366 -------FDGLCRWRQFREAVVVLDEMMFKGYAPLSK 395
G+C R+F+ A + +M G P K
Sbjct: 490 VSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGK 526
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 104/250 (41%), Gaps = 10/250 (4%)
Query: 149 DACTYNILIRASCLRGHADRAFE---LFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
D YN I L G + +E ++ M+ G + T+ L+ R A
Sbjct: 213 DVVLYNTAIS---LCGRINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELAL 269
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
++ +EM K+ +I K + A +I M+KKG+K + NTLIN+
Sbjct: 270 DVYDEMVNN-KISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINS 328
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVI 325
L KAGK +V ++ G + + T N ++ + N +E+ ++ D + +
Sbjct: 329 LGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENLCCL 388
Query: 326 G---YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVL 382
YN + K G W +A+ L ++M G +Y + + R+ + A++V
Sbjct: 389 NEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVY 448
Query: 383 DEMMFKGYAP 392
+ M + P
Sbjct: 449 EHMAQRDCKP 458
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 129/284 (45%), Gaps = 28/284 (9%)
Query: 85 CHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGE 144
HVIT Y + A + F + S ++ + ++ ++ L +Q ++ E+ + E
Sbjct: 81 THVITGYIKLGDMREARELFDRVDS---RKNVVTWTAMVSGYLRSKQL-SIAEMLFQ--E 134
Query: 145 FGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREA 204
+ ++N +I G D+A ELFDEM R + ++ +++ L + R+ EA
Sbjct: 135 MPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSMVKALVQRGRIDEA 190
Query: 205 FELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLIN 264
L E M R V +T ++ G+ K G++ A R+ D M ++ + +N +I
Sbjct: 191 MNLFERMPRR-----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNI----ISWNAMIT 241
Query: 265 ALFKAGKKEEALRVLEEMREGG-CEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPD 323
+ + +EA ++ + M E WN+ MI + R +A + D + + +
Sbjct: 242 GYAQNNRIDEADQLFQVMPERDFASWNT-----MITGFIRNREMNKACGLFDRMP--EKN 294
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCA-PDVVTYRTLF 366
VI + + + + EA+++F M R G P+V TY ++
Sbjct: 295 VISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSIL 338
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 112/238 (47%), Gaps = 31/238 (13%)
Query: 167 DRAFELFDEMRS---RGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTI 223
DR+ +LF+ +RS RP LI LC+ ++ EA +L + + E V
Sbjct: 25 DRSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGL-----PERDVVT 79
Query: 224 YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMR 283
+T++I G K+G++ A + D + + + + +++ ++ + A + +EM
Sbjct: 80 WTHVITGYIKLGDMREARELFDRVDSRK---NVVTWTAMVSGYLRSKQLSIAEMLFQEMP 136
Query: 284 EGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEA 343
E N V+ N MI Y + ++A + D E + +++ +N + L + G+ EA
Sbjct: 137 ER----NVVSWNTMIDGYAQSGRIDKALELFD--EMPERNIVSWNSMVKALVQRGRIDEA 190
Query: 344 MDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM----------MFKGYA 391
M+LF MPRR DVV++ + DGL + + EA + D M M GYA
Sbjct: 191 MNLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYA 244
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/355 (19%), Positives = 148/355 (41%), Gaps = 49/355 (13%)
Query: 42 RHSLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCH---VITFYARARQPS 98
R +++++ +++ R+K L E + ++ PE + +I YA++ +
Sbjct: 106 RKNVVTWTAMVSGYLRSKQLSIAEMLFQEM--------PERNVVSWNTMIDGYAQSGRID 157
Query: 99 RAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIR 158
+A++ F +P +R + S+N+++ AL+ + D L R D ++ ++
Sbjct: 158 KALELFDEMP----ERNIVSWNSMVKALVQRGRIDEAMNLFER---MPRRDVVSWTAMVD 210
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM-FREFKL 217
G D A LFD M R + ++ +I +N+R+ EA +L + M R+F
Sbjct: 211 GLAKNGKVDEARRLFDCMPERNI----ISWNAMITGYAQNNRIDEADQLFQVMPERDFAS 266
Query: 218 -------------------------EGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKG- 251
E V +T +I G + E A + +M++ G
Sbjct: 267 WNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNVFSKMLRDGS 326
Query: 252 LKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAY 311
+K + Y ++++A E ++ + + + + N + + ++ Y + A
Sbjct: 327 VKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAAR 386
Query: 312 RILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLF 366
++ D + D+I +N + G EA+++++ M + G P VTY L
Sbjct: 387 KMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLL 441
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 108/267 (40%), Gaps = 17/267 (6%)
Query: 110 FRC--QRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHAD 167
F C +R + S+N ++ + D +L E D ++N +I +
Sbjct: 225 FDCMPERNIISWNAMITGYAQNNRIDEADQLFQVMPE---RDFASWNTMITGFIRNREMN 281
Query: 168 RAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNL 227
+A LFD M + V ++ T+I EN EA + +M R+ ++ V Y ++
Sbjct: 282 KACGLFDRMPEKNV----ISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSI 337
Query: 228 IKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGG- 286
+ + L +I + K + + + + L+N K+G+ L +M + G
Sbjct: 338 LSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGE----LIAARKMFDNGL 393
Query: 287 -CEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEA 343
C+ + ++ N MI Y + +EA + + + G KP + Y L G +
Sbjct: 394 VCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKG 453
Query: 344 MDLFHDMPRRGCAPDVVTYRTLFDGLC 370
M+ F D+ R P + T LC
Sbjct: 454 MEFFKDLVRDESLPLREEHYTCLVDLC 480
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 86/194 (44%), Gaps = 17/194 (8%)
Query: 262 LINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVK 321
LI L K GK EA ++ + G E + VT +I Y + + EA + D V+ K
Sbjct: 52 LIGELCKVGKIAEARKLFD----GLPERDVVTWTHVITGYIKLGDMREARELFDRVDSRK 107
Query: 322 PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVV 381
+V+ + + + + S A LF +MP R +VV++ T+ DG + + +A+ +
Sbjct: 108 -NVVTWTAMVSGYLRSKQLSIAEMLFQEMPER----NVVSWNTMIDGYAQSGRIDKALEL 162
Query: 382 LDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCK 441
DEM + + N+ V L Q G + + + + + W ++ + K
Sbjct: 163 FDEMPERNIV----SWNSMVKALVQRGRIDEAMNLFERMPRRDVVS----WTAMVDGLAK 214
Query: 442 PEKVPESFELLDAL 455
KV E+ L D +
Sbjct: 215 NGKVDEARRLFDCM 228
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 6/237 (2%)
Query: 152 TYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM 211
++N +I + G + A ELF+++ S G++PD AT+ +LI + ++ EAF+ E M
Sbjct: 300 SWNSVISGMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM 359
Query: 212 FREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGK 271
+ + T+L+ I L I ++K + D + +LI+ K G
Sbjct: 360 LSVVMVPS-LKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGL 418
Query: 272 KEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNV 329
A R+ + + V NVMI Y + E A I + + E V+P + +
Sbjct: 419 SSWARRIFDRFEPK--PKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTA 476
Query: 330 FLGWLCKEGKWSEAMDLFHDMPRR-GCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
L G + +F M G P + D L R + REA V+D+M
Sbjct: 477 VLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 118/287 (41%), Gaps = 10/287 (3%)
Query: 68 LHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALL 127
LH L + + + +I Y++ R A F + + R L S+N+++ ++
Sbjct: 253 LHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTEL---KDTRNLISWNSVISGMM 309
Query: 128 TCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQA 186
Q + EL + G PD+ T+N LI G AF+ F+ M S + P
Sbjct: 310 INGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLK 369
Query: 187 TFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDE 246
+L+ + L+ E+ + + E + + T+LI K G SWA RI D
Sbjct: 370 CLTSLLSACSDIWTLKNGKEIHGHVIKA-AAERDIFVLTSLIDMYMKCGLSSWARRIFDR 428
Query: 247 MVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENN 306
K D +N +I+ K G+ E A+ + E +RE E + T ++ N
Sbjct: 429 FEPK--PKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGN 486
Query: 307 FEEA---YRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM 350
E+ +R++ G KP + L + G+ EA ++ M
Sbjct: 487 VEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 103/281 (36%), Gaps = 38/281 (13%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
VI+ + R S+A I + ++ TL+ + L AGE
Sbjct: 641 VISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESK 700
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
P +I A G + A+ LF E +G P T L++ L + REA
Sbjct: 701 TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREA-- 758
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
I C ++K ++LD YNTLI A+
Sbjct: 759 -------------------EHISRTC---------------LEKNIELDTVGYNTLIKAM 784
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDV 324
+AGK + A + E M G + T N MI Y R ++A I G+ D
Sbjct: 785 LEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDE 844
Query: 325 IGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTL 365
Y + K GK SEA+ LF +M ++G P +Y +
Sbjct: 845 KIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMM 885
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 102/243 (41%), Gaps = 9/243 (3%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
D YN LI+A G A E+++ M + GV T+ T+I +L +A E+
Sbjct: 773 DTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEI- 831
Query: 209 EEMFREFKLEGCV---TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
F + G IYTN+I K G++S A + EM KKG+K YN ++
Sbjct: 832 ---FSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKI 888
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPD 323
+ E +L+ M G + T +I Y + F EA + + V +G+
Sbjct: 889 CATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLS 948
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLD 383
++ L L K G EA + M G +PD RT+ G + ++ +
Sbjct: 949 HSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYE 1008
Query: 384 EMM 386
+M+
Sbjct: 1009 KMI 1011
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 113/303 (37%), Gaps = 38/303 (12%)
Query: 78 RVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTE 137
R+ E + +I Y R + A + +L+ + +++ A + C +
Sbjct: 667 RMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKTPGK-SVIRSMIDAYVRCGWLEDAYG 725
Query: 138 LAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLC 196
L + E G P A T +IL+ A RG A + + + D + TLI +
Sbjct: 726 LFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAML 785
Query: 197 ENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDA 256
E +L+ A E+ E M + + Y +I + +L A I + GL LD
Sbjct: 786 EAGKLQCASEIYERMHTS-GVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDE 844
Query: 257 ALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDG 316
+Y +I K GK EAL + EM++
Sbjct: 845 KIYTNMIMHYGKGGKMSEALSLFSEMQK-------------------------------- 872
Query: 317 VEGVKPDVIGYNVFLGWLCKEGKWSEAMD-LFHDMPRRGCAPDVVTYRTLFDGLCRWRQF 375
+G+KP YN+ + +C + +D L M R G D+ TY TL QF
Sbjct: 873 -KGIKPGTPSYNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQF 930
Query: 376 REA 378
EA
Sbjct: 931 AEA 933
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 2/197 (1%)
Query: 258 LYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV 317
+Y ++ + GK + A EM E GCE ++V C M+ Y R V
Sbjct: 190 VYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAV 249
Query: 318 EG--VKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQF 375
+ + YN L L K+ + +DL+ +M G P+ TY + +
Sbjct: 250 QERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFK 309
Query: 376 REAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVV 435
EA+ EM G+ P ++ +S + G++E + D+ S+G + + +
Sbjct: 310 EEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATM 369
Query: 436 LSMVCKPEKVPESFELL 452
LS+ K E P++ L
Sbjct: 370 LSLYYKTENYPKALSLF 386
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 92/217 (42%), Gaps = 7/217 (3%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRL--REAF 205
P Y I++R G A E F EM G PD GT+ LC +R A
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTM---LCTYARWGRHSAM 242
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
+ +E ++ ++Y ++ + K + EMV++G+ + Y ++++
Sbjct: 243 LTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSS 302
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPD 323
K G KEEAL+ EM+ G VT + +I + ++E+A + + + +G+ P
Sbjct: 303 YAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPS 362
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVV 360
L K + +A+ LF DM R D V
Sbjct: 363 NYTCATMLSLYYKTENYPKALSLFADMERNKIPADEV 399
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 4/189 (2%)
Query: 115 TLKSFNTLLHALLTCRQFDAVTELAARAGEFGAP-DACTYNILIRASCLRGHADRAFELF 173
+++++NT++ Q D E+ + A G D Y +I G A LF
Sbjct: 808 SIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLF 867
Query: 174 DEMRSRGVRPDQATFGTLIHRLCENSRLR-EAFELKEEMFREFKLEGCVTIYTNLIKGVC 232
EM+ +G++P ++ ++ ++C SRL E EL + M R + T Y LI+
Sbjct: 868 SEMQKKGIKPGTPSYNMMV-KICATSRLHHEVDELLQAMERNGRCTDLST-YLTLIQVYA 925
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
+ + + A + + +KG+ L + +++L++AL KAG EEA R +M E G +S
Sbjct: 926 ESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSA 985
Query: 293 TCNVMIGEY 301
++ Y
Sbjct: 986 CKRTILKGY 994
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 99/258 (38%), Gaps = 37/258 (14%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P+ TY+ +I S G ++A L+++MRS+G+ P T T++ + +A L
Sbjct: 326 PEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSL 385
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
+M R K+ I +I+ K+G A + +E + L D Y +
Sbjct: 386 FADMERN-KIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHL 444
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNF---EEAYRILDG-------- 316
+G +AL V+E M+ + VM+ Y + N EEA+R L
Sbjct: 445 NSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGLPDASS 504
Query: 317 -------------------------VEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
V+ V D+ Y + CKEG +EA DL M
Sbjct: 505 CNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMG 564
Query: 352 RRGCAPDVVTYRTLFDGL 369
R D +TL + +
Sbjct: 565 REARVKDNRFVQTLAESM 582
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 102/262 (38%), Gaps = 5/262 (1%)
Query: 198 NSRLREAF--ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLD 255
N RL+E E K + FK + + +I + G++S A I D +++ GL+++
Sbjct: 610 NLRLKEGNLNETKAILNLMFKTDLGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRME 669
Query: 256 AALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRIL- 314
TLI + K +EA R+ E SV MI Y R E+AY +
Sbjct: 670 EETIATLIAVYGRQHKLKEAKRLYLAAGESKTPGKSV-IRSMIDAYVRCGWLEDAYGLFM 728
Query: 315 -DGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWR 373
+G P + ++ + L GK EA + + D V Y TL +
Sbjct: 729 ESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAG 788
Query: 374 QFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWD 433
+ + A + + M G + N +S + + + S+ G +E I+
Sbjct: 789 KLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYT 848
Query: 434 VVLSMVCKPEKVPESFELLDAL 455
++ K K+ E+ L +
Sbjct: 849 NMIMHYGKGGKMSEALSLFSEM 870
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/223 (19%), Positives = 101/223 (45%), Gaps = 2/223 (0%)
Query: 221 VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLE 280
V +YT +++ ++G++ A EM++ G + DA T++ + G+ L +
Sbjct: 188 VVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYK 247
Query: 281 EMREGGCEWNSVTCNVMIGEYCRENNFEEAYRI-LDGVE-GVKPDVIGYNVFLGWLCKEG 338
++E ++ N M+ +++ + + L+ VE GV P+ Y + + K+G
Sbjct: 248 AVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQG 307
Query: 339 KWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLN 398
EA+ F +M G P+ VTY ++ + + +A+ + ++M +G P +
Sbjct: 308 FKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCA 367
Query: 399 AFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCK 441
+S + N+ ++ +D+ +E I +++ + K
Sbjct: 368 TMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGK 410
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/351 (21%), Positives = 148/351 (42%), Gaps = 21/351 (5%)
Query: 123 LHALLTCRQFDAVTELAARAGEFGA--PDACTYNILIRASCLRGHADRAFELFDEM-RSR 179
+ +L+ DA ++LA R F P T N +I A + LF +
Sbjct: 152 VQSLIRASDLDAASKLA-RQSVFSNTRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQS 210
Query: 180 GVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSW 239
+ P+ ++ +I+ C+ + EA E+ + Y +L KG+ + G +
Sbjct: 211 NIVPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGD 270
Query: 240 AFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIG 299
A + EM+ KG D+ +YN LI G ++A+ +E++ ++ + N
Sbjct: 271 AASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGI-VNATFM 329
Query: 300 EYCRE--NNFE--EAYR-ILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
EY E N+ E E+YR +LD + P NV L K GK EA LF++M
Sbjct: 330 EYWFEKGNDKEAMESYRSLLDKKFRMHPPT--GNVLLEVFLKFGKKDEAWALFNEMLDNH 387
Query: 355 CAPDVVTYRTLFDGLC-----RWRQFREAVVVLDEMMFKGYA-PLSKNLNAF---VSELC 405
P++++ + G+ + +F EA+ ++ K + P + + V+ C
Sbjct: 388 APPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRFC 447
Query: 406 QEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELLDALV 456
++G ++ S+ + ++ K E++ ++ ++LD +V
Sbjct: 448 EQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMV 498
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 118/305 (38%), Gaps = 57/305 (18%)
Query: 133 DAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLI 192
DA + L + A D+ YN LIR G D+A E FDE++S+ D T +
Sbjct: 270 DAASLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFM 329
Query: 193 HRLCENSRLREAFE----LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMV 248
E +EA E L ++ FR G V L++ K G+ A+ + +EM+
Sbjct: 330 EYWFEKGNDKEAMESYRSLLDKKFRMHPPTGNV-----LLEVFLKFGKKDEAWALFNEML 384
Query: 249 KKG-----LKLDAALYNTLINALFKAGKKEEALRVLEEMRE------------GGCEWNS 291
L +++ ++N FK G+ EA+ +++ G C +
Sbjct: 385 DNHAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVT 444
Query: 292 VTCN---------------------------VMIGEYCRENNFEEAYRILDGVEGVKPDV 324
C MI Y + ++A ++LD + V V
Sbjct: 445 RFCEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRV 504
Query: 325 I---GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVV 381
+ G VF G L K GK +E+ ++ M R PD Y + GLC +A +
Sbjct: 505 VADFGARVF-GELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDI 563
Query: 382 LDEMM 386
+ EM+
Sbjct: 564 VGEMI 568
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 128/299 (42%), Gaps = 23/299 (7%)
Query: 102 QTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASC 161
QT I F Q + N+L+H C A + G+ G D ++ ++ C
Sbjct: 138 QTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIF---GQMGFRDVVSWTSMVAGYC 194
Query: 162 LRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCV 221
G + A E+FDEM R + T+ +I+ +N+ +A +L E M R EG V
Sbjct: 195 KCGMVENAREMFDEMPHRNL----FTWSIMINGYAKNNCFEKAIDLFEFMKR----EGVV 246
Query: 222 ---TIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRV 278
T+ ++I +G L + R + +VK + ++ L L++ ++ G E+A+ V
Sbjct: 247 ANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHV 306
Query: 279 LEEMRE-GGCEWNSVTCNVMIGEYCRE--NNFEEAYRILDGVEGVKPDVIGYNVFLGWLC 335
E + E W+S+ + + + + + F + + G P + + L
Sbjct: 307 FEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISL-----GFIPRDVTFTAVLSACS 361
Query: 336 KEGKWSEAMDLFHDMPR-RGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPL 393
G + ++++ +M + G P + Y + D L R + EA + +M K AP+
Sbjct: 362 HGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPI 420
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 114/302 (37%), Gaps = 55/302 (18%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
P+ +N+LIR +AF + +M + PD TF LI E + +
Sbjct: 80 PNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQT 139
Query: 208 KEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALF 267
++ R F + V + +L+ G ++ A RI +M G + D + +++
Sbjct: 140 HSQIVR-FGFQNDVYVENSLVHMYANCGFIAAAGRIFGQM---GFR-DVVSWTSMVAGYC 194
Query: 268 KAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRIL-----DGV---EG 319
K G E A + +EM N T ++MI Y + N FE+A + +GV E
Sbjct: 195 KCGMVENAREMFDEMPHR----NLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANET 250
Query: 320 VKPDVIG------------------------YNVFLG-------WLCKEGKWSEAMDLFH 348
V VI N+ LG W C G +A+ +F
Sbjct: 251 VMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRC--GDIEKAIHVFE 308
Query: 349 DMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEG 408
+P D +++ ++ GL +A+ +M+ G+ P A +S C G
Sbjct: 309 GLPE----TDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSA-CSHG 363
Query: 409 NF 410
Sbjct: 364 GL 365
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/428 (20%), Positives = 169/428 (39%), Gaps = 37/428 (8%)
Query: 44 SLLSYDLIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEPLLCHVITFYARARQPSRAVQT 103
SLL + + + +G+ K + LH + ++ LL YA+ A +
Sbjct: 437 SLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALL----DAYAKCGNVEYAHKI 492
Query: 104 FLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLR 163
FL + +RTL S+N+LL + D L E D T+++++R
Sbjct: 493 FLGLSE---RRTLVSYNSLLSGYVNSGSHDDAQMLFT---EMSTTDLTTWSLMVRIYAES 546
Query: 164 GHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFR----EFKLEG 219
+ A +F E+++RG+RP+ T L+ + + L + + R + +L+G
Sbjct: 547 CCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGGLGDIRLKG 606
Query: 220 CVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVL 279
L+ K G L A+ + ++ D ++ ++ G+ +EAL +
Sbjct: 607 ------TLLDVYAKCGSLKHAYSVFQSDARR----DLVMFTAMVAGYAVHGRGKEALMIY 656
Query: 280 EEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDG---VEGVKPDVIGYNVFLGWLCK 336
M E + + V M+ C ++ +I D V G+KP + Y + + +
Sbjct: 657 SHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIAR 716
Query: 337 EGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKN 396
G+ +A MP P+ + TL + + V + ++ +
Sbjct: 717 GGRLDDAYSFVTQMP---VEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNH 773
Query: 397 L---NAFVSELCQEGNFELLSTVLSDLTSKGKICN----EGIWDVVLSMVCKPEKVPESF 449
+ N + ++ EG EL + + K C+ +G +V +S C + F
Sbjct: 774 VLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIF 833
Query: 450 ELLDALVL 457
+L++AL L
Sbjct: 834 DLVNALYL 841
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 127/355 (35%), Gaps = 68/355 (19%)
Query: 120 NTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSR 179
N+L+H +C D+ ++ E D ++N +I +G D+A ELF +M S
Sbjct: 170 NSLIHCYFSCGDLDSACKVFTTIKE---KDVVSWNSMINGFVQKGSPDKALELFKKMESE 226
Query: 180 GVRPDQAT---------------FGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIY 224
V+ T FG + E +R+ L M + G +
Sbjct: 227 DVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDA 286
Query: 225 TNLIKGVCKIGELSWA-----------FRIKDEMVKKGLKLDAALYNTLINALFKAGKKE 273
L + + ++W + E++ + D +N LI+A + GK
Sbjct: 287 KRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPN 346
Query: 274 EALRVLEEM------------------------------------REGGCEWNSVTCNVM 297
EAL V E+ ++ G N + +
Sbjct: 347 EALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSAL 406
Query: 298 IGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAP 357
I Y + + E++ + + VE K DV ++ +G L G +EA+D+F+ M P
Sbjct: 407 IHMYSKCGDLEKSREVFNSVE--KRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464
Query: 358 DVVTYRTLFDGLCRWRQFREAVVVLDEMMFK-GYAPLSKNLNAFVSELCQEGNFE 411
+ VT+ +F EA + +M G P K+ V L + G E
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLE 519
>AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:20791259-20792314 FORWARD
LENGTH=351
Length = 351
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 37/222 (16%)
Query: 224 YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMR 283
Y LI +CK+G + A + ++M L +++ ++N L K + EEA RV+E MR
Sbjct: 128 YETLIARLCKLGRIDDALVLINDMAIGEFGLSTCVFHPILNTLTKKNRIEEAWRVVELMR 187
Query: 284 EGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV----EGV-KPDVIGYNVFLGWLCKEG 338
+ + N + +C + + EA R+L + EGV PD Y+ + CK G
Sbjct: 188 SHAIPVDVTSYNYFLTSHCYDGDVAEASRVLRKMEEEEEGVMSPDTRTYDALVLGACKSG 247
Query: 339 KWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLS---- 394
+ AM + M G + V Y T V+ EM+ GY LS
Sbjct: 248 RVEAAMAILRRMEEEGLS---VLYAT-------------HAHVIGEMVESGYYALSVEFV 291
Query: 395 ------------KNLNAFVSELCQEGNFELLSTVLSDLTSKG 424
+NL + S+L + F+ VL +++ +G
Sbjct: 292 MAYAGKDKRLDEENLGSLASKLIKRKRFKEAKMVLKEMSVRG 333
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 5/195 (2%)
Query: 259 YNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV- 317
Y TLI L K G+ ++AL ++ +M G ++ + ++ ++N EEA+R+++ +
Sbjct: 128 YETLIARLCKLGRIDDALVLINDMAIGEFGLSTCVFHPILNTLTKKNRIEEAWRVVELMR 187
Query: 318 -EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG---CAPDVVTYRTLFDGLCRWR 373
+ DV YN FL C +G +EA + M +PD TY L G C+
Sbjct: 188 SHAIPVDVTSYNYFLTSHCYDGDVAEASRVLRKMEEEEEGVMSPDTRTYDALVLGACKSG 247
Query: 374 QFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWD 433
+ A+ +L M +G + L + E+ + G + L + K K +E
Sbjct: 248 RVEAAMAILRRMEEEGLSVLYATHAHVIGEMVESGYYALSVEFVMAYAGKDKRLDEENLG 307
Query: 434 VVLSMVCKPEKVPES 448
+ S + K ++ E+
Sbjct: 308 SLASKLIKRKRFKEA 322
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 120/282 (42%), Gaps = 24/282 (8%)
Query: 128 TCRQFDAVTELAARAGEFGAP---------DAC-----TYNILIRASCLRGHADRAFELF 173
TC +FD + A +G+F A +AC T+ L + +
Sbjct: 56 TCVEFDNLIFKAGSSGDFEAVRRLLNSRVVNACFNTTATFKFLTNTDSYSSSLEDLRRIL 115
Query: 174 DEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEM-FREFKLEGCVTIYTNLIKGVC 232
+ + R + ++ TLI RLC+ R+ +A L +M EF L CV + ++ +
Sbjct: 116 PQTDAGYTR--KHSYETLIARLCKLGRIDDALVLINDMAIGEFGLSTCV--FHPILNTLT 171
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVL---EEMREGGCEW 289
K + A+R+ + M + +D YN + + G EA RVL EE EG
Sbjct: 172 KKNRIEEAWRVVELMRSHAIPVDVTSYNYFLTSHCYDGDVAEASRVLRKMEEEEEGVMSP 231
Query: 290 NSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLF 347
++ T + ++ C+ E A IL + EG+ + +G + + G ++ +++
Sbjct: 232 DTRTYDALVLGACKSGRVEAAMAILRRMEEEGLSVLYATHAHVIGEMVESGYYALSVEFV 291
Query: 348 HDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKG 389
+ D +L L + ++F+EA +VL EM +G
Sbjct: 292 MAYAGKDKRLDEENLGSLASKLIKRKRFKEAKMVLKEMSVRG 333
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 158/381 (41%), Gaps = 36/381 (9%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFG 146
++T R +A Q F ++PS R + S+N ++ + + D + E G+
Sbjct: 175 LVTGLIRNGDMEKAKQVFDAMPS----RDVVSWNAMIKGYI---ENDGMEEAKLLFGDMS 227
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
+ T+ ++ C G A+ LF EM R + ++ +I N REA
Sbjct: 228 EKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNI----VSWTAMISGFAWNELYREALM 283
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFR-----IKDEMVKKGLKL---DAAL 258
L EM ++ ++ LI G L FR + +++ G + D L
Sbjct: 284 LFLEMKKD--VDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRL 341
Query: 259 YNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE 318
+L++ +G A +L E ++ +CN++I Y + + E A + + V+
Sbjct: 342 AKSLVHMYASSGLIASAQSLLNE------SFDLQSCNIIINRYLKNGDLERAETLFERVK 395
Query: 319 GVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREA 378
+ V ++ G+L + G S A LF + + D VT+ + GL + F EA
Sbjct: 396 SLHDKVSWTSMIDGYL-EAGDVSRAFGLFQKLHDK----DGVTWTVMISGLVQNELFAEA 450
Query: 379 VVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEG---IWDVV 435
+L +M+ G PL+ + +S N + + + +K C + + + +
Sbjct: 451 ASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHC-VIAKTTACYDPDLILQNSL 509
Query: 436 LSMVCKPEKVPESFELLDALV 456
+SM K + +++E+ +V
Sbjct: 510 VSMYAKCGAIEDAYEIFAKMV 530
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 97/218 (44%), Gaps = 19/218 (8%)
Query: 235 GELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTC 294
G L A + D++ ++G + +L++ K G +EA + E M E N VTC
Sbjct: 56 GGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPER----NIVTC 111
Query: 295 NVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
N M+ Y + EA+ + + +V+ + V L LC +G+ +A++LF +MP R
Sbjct: 112 NAMLTGYVKCRRMNEAWTLF---REMPKNVVSWTVMLTALCDDGRSEDAVELFDEMPER- 167
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLS 414
+VV++ TL GL R +A V D M + + NA + + E
Sbjct: 168 ---NVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVV----SWNAMIKGYIENDGMEEAK 220
Query: 415 TVLSDLTSKGKICNEGIWDVVLSMVCKPEKVPESFELL 452
+ D++ K + W ++ C+ V E++ L
Sbjct: 221 LLFGDMSEKNVV----TWTSMVYGYCRYGDVREAYRLF 254
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 25/204 (12%)
Query: 154 NILIRASCLRGHA-----DRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
NI+ + L G+ + A+ LF EM V ++ ++ LC++ R +A EL
Sbjct: 107 NIVTCNAMLTGYVKCRRMNEAWTLFREMPKNVV-----SWTVMLTALCDDGRSEDAVELF 161
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
+EM E V + L+ G+ + G++ A ++ D M + D +N +I +
Sbjct: 162 DEM-----PERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSR----DVVSWNAMIKGYIE 212
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYN 328
EEA + +M E N VT M+ YCR + EAYR+ E + +++ +
Sbjct: 213 NDGMEEAKLLFGDMSEK----NVVTWTSMVYGYCRYGDVREAYRLF--CEMPERNIVSWT 266
Query: 329 VFLGWLCKEGKWSEAMDLFHDMPR 352
+ + EA+ LF +M +
Sbjct: 267 AMISGFAWNELYREALMLFLEMKK 290
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 117/299 (39%), Gaps = 30/299 (10%)
Query: 87 VITFYARARQPSRAVQTFLSIPSFRCQRTLKS-FNTLLHALLTCRQFDAVTELAARAGEF 145
+I Y + RA F + S + + S + L A R F +L +
Sbjct: 374 IINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDK---- 429
Query: 146 GAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAF 205
D T+ ++I A L +M G++P +T+ L+ S L +
Sbjct: 430 ---DGVTWTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGK 486
Query: 206 ELKEEMFREFKLEGC----VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNT 261
+ + K C + + +L+ K G + A+ I +MV+K D +N+
Sbjct: 487 HIHCVIA---KTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQK----DTVSWNS 539
Query: 262 LINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFE----EAYRILDGV 317
+I L G ++AL + +EM + G + NSVT + + C + E ++ +
Sbjct: 540 MIMGLSHHGLADKALNLFKEMLDSGKKPNSVTF-LGVLSACSHSGLITRGLELFKAMKET 598
Query: 318 EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLC--RWRQ 374
++P + Y + L + GK EA + +P PD Y L GLC WR
Sbjct: 599 YSIQPGIDHYISMIDLLGRAGKLKEAEEFISALP---FTPDHTVYGALL-GLCGLNWRD 653
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 99/243 (40%), Gaps = 13/243 (5%)
Query: 126 LLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQ 185
+ C F + + + P+ YN L + H R+ EL+ M V P
Sbjct: 812 ITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSS 871
Query: 186 ATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKD 245
T+ +L+ SR E+ + +F V I T LI G + A ++ D
Sbjct: 872 YTYSSLVKASSFASRFGESLQAH---IWKFGFGFHVKIQTTLIDFYSATGRIREARKVFD 928
Query: 246 EMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCREN 305
EM ++ D + T+++A + + A + +M E N T N +I Y
Sbjct: 929 EMPER----DDIAWTTMVSAYRRVLDMDSANSLANQMSEK----NEATSNCLINGYMGLG 980
Query: 306 NFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTL 365
N E+A + + + VK D+I + + + ++ EA+ +F+ M G PD VT T+
Sbjct: 981 NLEQAESLFNQMP-VK-DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTV 1038
Query: 366 FDG 368
Sbjct: 1039 ISA 1041
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 111/273 (40%), Gaps = 18/273 (6%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD Y+ LI +G A LF EM++ G RPD + + LI +A E
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 208 KEEMFREFK-LEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLI 263
+ K +E C V Y L++ + G++ + ++ + D +N ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 264 NALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVK 321
+A K G +E VL MR C+ + +T NV+I Y ++ FE+ + + K
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 322 PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYR--TLFDGLC----RWRQF 375
P + +N + K +A +F M P +TY + G C R R+
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREI 370
Query: 376 REAVVVLDEMMFKGYAPLSKNLNAFVSELCQEG 408
E V D ++ + LNA + C+ G
Sbjct: 371 FEEVGESDRVL------KASTLNAMLEVYCRNG 397
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 7/173 (4%)
Query: 255 DAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENN----FEEA 310
D +Y+ LI+ + K G+ A+ + EM+ GC ++ N +I + + E+
Sbjct: 132 DNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKV 191
Query: 311 YRILD---GVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFD 367
LD G+E +P+V+ YN+ L + GK + LF D+ +PDV T+ + D
Sbjct: 192 RGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMD 251
Query: 368 GLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDL 420
+ +E VL M P N + ++ FE + L
Sbjct: 252 AYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL 304
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 144/357 (40%), Gaps = 21/357 (5%)
Query: 50 LIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEP-LLCHVITFYARARQPSRAVQTFLSIP 108
L+ +LG++ + +V + R +P+ + +I+ + Q A+ F +
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQ-KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMK 160
Query: 109 SFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAG--------EFGAPDACTYNILIRAS 160
+ C+ +N L+ A L R D L G E P+ TYNIL+RA
Sbjct: 161 NSGCRPDASVYNALITAHLHTR--DKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218
Query: 161 CLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC 220
G D+ LF ++ V PD TF ++ +N ++E + M R + +
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM-RSNECKPD 277
Query: 221 VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLE 280
+ + LI K E + +++ K +N++I KA ++A V +
Sbjct: 278 IITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFK 337
Query: 281 EMREGGCEWNSVT--CNVMIGEYCRENNFEEAYRILDGVEGVKPDVIG---YNVFLGWLC 335
+M + + +T C +M+ YC + A I + V G V+ N L C
Sbjct: 338 KMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEV-GESDRVLKASTLNAMLEVYC 394
Query: 336 KEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
+ G + EA LFH+ PD TY+ L+ + + +++ +M G P
Sbjct: 395 RNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVP 451
>AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 5/158 (3%)
Query: 273 EEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVF 330
E++ + ++M+EGG N+V M+ C++ +EA ++ + +G P+V+ Y
Sbjct: 116 EDSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 331 LGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGY 390
+ CK K +A +F M G AP+ +Y L GL +AV EM+ G+
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 391 APLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICN 428
+P V LC+ E + + L KG N
Sbjct: 233 SPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVN 270
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 33/198 (16%)
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
E +E+F++ K G + ++ G+CK G + A ++ M KG + +Y ++ A
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEA 175
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVI 325
KA K E+A R+ +M +NN G+ P+
Sbjct: 176 FCKAHKIEDAKRIFRKM---------------------QNN------------GIAPNAF 202
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
Y V + L +A+ +M G +P+V T+ L D LCR + +A +D +
Sbjct: 203 SYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTL 262
Query: 386 MFKGYAPLSKNLNAFVSE 403
KG+A K + F+ +
Sbjct: 263 NQKGFAVNVKAVKEFMDK 280
>AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17901211-17902119 REVERSE
LENGTH=302
Length = 302
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 71/158 (44%), Gaps = 5/158 (3%)
Query: 273 EEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVF 330
E++ + ++M+EGG N+V M+ C++ +EA ++ + +G P+V+ Y
Sbjct: 116 EDSDEIFKKMKEGGLIPNAV---AMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAV 172
Query: 331 LGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGY 390
+ CK K +A +F M G AP+ +Y L GL +AV EM+ G+
Sbjct: 173 VEAFCKAHKIEDAKRIFRKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGH 232
Query: 391 APLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICN 428
+P V LC+ E + + L KG N
Sbjct: 233 SPNVPTFVELVDALCRVKGVEQAQSAIDTLNQKGFAVN 270
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 83/198 (41%), Gaps = 33/198 (16%)
Query: 206 ELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINA 265
E +E+F++ K G + ++ G+CK G + A ++ M KG + +Y ++ A
Sbjct: 116 EDSDEIFKKMKEGGLIPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEA 175
Query: 266 LFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVI 325
KA K E+A R+ +M +NN G+ P+
Sbjct: 176 FCKAHKIEDAKRIFRKM---------------------QNN------------GIAPNAF 202
Query: 326 GYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM 385
Y V + L +A+ +M G +P+V T+ L D LCR + +A +D +
Sbjct: 203 SYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRVKGVEQAQSAIDTL 262
Query: 386 MFKGYAPLSKNLNAFVSE 403
KG+A K + F+ +
Sbjct: 263 NQKGFAVNVKAVKEFMDK 280
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 224 YTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMR 283
YT ++ + G + + + M +KG+ +D Y +LI+ + +G + A+R+ EEMR
Sbjct: 125 YTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEMR 184
Query: 284 EGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWS 341
+ GCE V+ + + EEA + + V P+ Y V + +L GK
Sbjct: 185 DNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKCE 244
Query: 342 EAMDLFHDMPRRGCAPD 358
EA+D+F M G PD
Sbjct: 245 EALDIFFKMQEIGVQPD 261
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 92/204 (45%), Gaps = 6/204 (2%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
D TY ++ G + +F M+ +GV D T+ +LIH + + + A L
Sbjct: 121 DHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLW 180
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
EEM R+ E V YT +K + G + A + EM++ + + Y L+ L
Sbjct: 181 EEM-RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVA 239
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCR--ENNFEEAYRILDGVEGVKPDVIG 326
GK EEAL + +M+E G + + CN++I + + E +F + GV V+
Sbjct: 240 TGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGV---VLR 296
Query: 327 YNVFLGWLCKEGKWSEAMDLFHDM 350
Y +F+ L E+ DL ++
Sbjct: 297 YPIFVEALETLKAAGESDDLLREV 320
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 89/198 (44%), Gaps = 8/198 (4%)
Query: 237 LSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNV 296
+WA +IK G K D Y T+++ +AG+ + V M+E G ++VT
Sbjct: 109 FNWAAQIK------GFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTS 162
Query: 297 MIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
+I + + A R+ + + G +P V+ Y ++ L +G+ EA +++ +M R
Sbjct: 163 LIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSR 222
Query: 355 CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLS 414
+P+ TY L + L + EA+ + +M G P N +++ + G ++
Sbjct: 223 VSPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMT 282
Query: 415 TVLSDLTSKGKICNEGIW 432
VL + G + I+
Sbjct: 283 RVLVYMKENGVVLRYPIF 300
>AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=1006
Length = 1006
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 100/251 (39%), Gaps = 23/251 (9%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMR 177
++ ++ +L C +++ V E + + P+A Y +L+ G +D A ++M
Sbjct: 630 TYGLIMEVMLACEKYNLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDME 689
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGEL 237
SRG+ A + L LC R E + F + + NLI + +
Sbjct: 690 SRGIVGSAALYYDLARCLCSAGRCNEGLNMV-----NFVNPVVLKLIENLIYKADLVHTI 744
Query: 238 SWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVM 297
+ + + K L Y LI A +G + A + ++M++ C N VTCN+M
Sbjct: 745 QFQLKKICRVANKPL---VVTYTGLIQACVDSGNIKNAAYIFDQMKK-VCSPNLVTCNIM 800
Query: 298 IGEYCRENNFEEAYRIL--------------DGVEGVKPDVIGYNVFLGWLCKEGKWSEA 343
+ Y + FEEA + D V PD +N L ++ KW +
Sbjct: 801 LKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDF 860
Query: 344 MDLFHDMPRRG 354
+ +M R G
Sbjct: 861 GYAYREMLRHG 871
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/324 (22%), Positives = 123/324 (37%), Gaps = 51/324 (15%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRL--CENSRLREAF 205
PD YN ++ A R + AF + +++ RG +P T+G ++ + CE +
Sbjct: 591 PDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEK------Y 644
Query: 206 ELKEEMFREFKLEGC--VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLI 263
L E FR+ + Y L+ + K G+ A ++M +G+ AALY L
Sbjct: 645 NLVHEFFRKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLA 704
Query: 264 NALFKAGKKEEALR--------VLEEMREGGCEWNSV-TCNVMIGEYCR----------- 303
L AG+ E L VL+ + + + V T + + CR
Sbjct: 705 RCLCSAGRCNEGLNMVNFVNPVVLKLIENLIYKADLVHTIQFQLKKICRVANKPLVVTYT 764
Query: 304 --------ENNFEEAYRILDGVEGV-KPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRG 354
N + A I D ++ V P+++ N+ L + G + EA +LF M G
Sbjct: 765 GLIQACVDSGNIKNAAYIFDQMKKVCSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDG 824
Query: 355 ------------CAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVS 402
PD T+ T+ D ++ + EM+ GY +K V
Sbjct: 825 NHIKNSSDFESRVLPDTYTFNTMLDTCAEQEKWDDFGYAYREMLRHGYHFNAKRHLRMVL 884
Query: 403 ELCQEGNFELLSTVLSDLTSKGKI 426
E + G E++ + +I
Sbjct: 885 EASRAGKEEVMEATWEHMRRSNRI 908
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 143/342 (41%), Gaps = 45/342 (13%)
Query: 91 YARARQPSRAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDA 150
YA A S+A++TF + F+ ++F LL AL + E + + D
Sbjct: 199 YAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLFPVDV 258
Query: 151 CTYNILIRASC-LRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKE 209
+N+++ C + A ++ EM + + P++ +
Sbjct: 259 EGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDS---------------------- 296
Query: 210 EMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKA 269
Y+++I K+G L + R+ DEM K+GL +YN+L+ L +
Sbjct: 297 --------------YSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTRE 342
Query: 270 GKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGY 327
+EA+++++++ E G + +SVT N MI C + A +L + E + P V +
Sbjct: 343 DCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSPTVDTF 402
Query: 328 NVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEM-M 386
+ FL + + + +++ M P T+ + L + +Q A+ + EM
Sbjct: 403 HAFL----EAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDR 458
Query: 387 FKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICN 428
F+ A + L A + L G E + S++ SKG + N
Sbjct: 459 FEIVANPALYL-ATIQGLLSCGWLEKAREIYSEMKSKGFVGN 499
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 112/262 (42%), Gaps = 17/262 (6%)
Query: 114 RTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELF 173
R + N+L+ C++ D A+ G+ + ++N +I G A F
Sbjct: 370 RNVSVVNSLISMYCKCKEVDTA---ASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYF 426
Query: 174 DEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCK 233
+MRSR V+PD T+ ++I + E S A + + R L+ V + T L+ K
Sbjct: 427 SQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSC-LDKNVFVTTALVDMYAK 485
Query: 234 IGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVT 293
G + A I D M ++ +N +I+ G + AL + EEM++G + N VT
Sbjct: 486 CGAIMIARLIFDMMSER----HVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVT 541
Query: 294 CNVMIGEYCRENNFEEA----YRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHD 349
+I C + EA + ++ ++ + Y + L + G+ +EA D
Sbjct: 542 FLSVISA-CSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQ 600
Query: 350 MPRRGCAPDVVTYRTLFDGLCR 371
MP + P V Y + G C+
Sbjct: 601 MPVK---PAVNVYGAML-GACQ 618
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 125/333 (37%), Gaps = 42/333 (12%)
Query: 156 LIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREF 215
L+ C G D A +F+ + S+ + T++ + S L +A + M R
Sbjct: 75 LVSLFCRYGSVDEAARVFEPIDSK----LNVLYHTMLKGFAKVSDLDKALQFFVRM-RYD 129
Query: 216 KLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEA 275
+E V +T L+K EL I +VK G LD L N K + EA
Sbjct: 130 DVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA 189
Query: 276 LRVLEEMREGG-CEWNSVTCNV-----------MIGEYCREN---NFEEAYRILDGVEG- 319
+V + M E WN++ M+ C EN +F +L V
Sbjct: 190 RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSAL 249
Query: 320 ----VKPDVIGYNVFLGW-------------LCKEGKWSEAMDLFHDMPRRGCAPDVVTY 362
V ++ GY + G+ K G A LF M R +VV++
Sbjct: 250 RLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLER----NVVSW 305
Query: 363 RTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTS 422
++ D + +EA+++ +M+ +G P ++ + G+ E +
Sbjct: 306 NSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVE 365
Query: 423 KGKICNEGIWDVVLSMVCKPEKVPESFELLDAL 455
G N + + ++SM CK ++V + + L
Sbjct: 366 LGLDRNVSVVNSLISMYCKCKEVDTAASMFGKL 398
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 111/273 (40%), Gaps = 18/273 (6%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFEL 207
PD Y+ LI +G A LF EM++ G RPD + + LI +A E
Sbjct: 131 PDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEK 190
Query: 208 KEEMFREFK-LEGC---VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLI 263
+ K +E C V Y L++ + G++ + ++ + D +N ++
Sbjct: 191 VRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVM 250
Query: 264 NALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVK 321
+A K G +E VL MR C+ + +T NV+I Y ++ FE+ + + K
Sbjct: 251 DAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEK 310
Query: 322 PDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYR--TLFDGLC----RWRQF 375
P + +N + K +A +F M P +TY + G C R R+
Sbjct: 311 PTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREI 370
Query: 376 REAVVVLDEMMFKGYAPLSKNLNAFVSELCQEG 408
E V D ++ + LNA + C+ G
Sbjct: 371 FEEVGESDRVL------KASTLNAMLEVYCRNG 397
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 7/173 (4%)
Query: 255 DAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENN----FEEA 310
D +Y+ LI+ + K G+ A+ + EM+ GC ++ N +I + + E+
Sbjct: 132 DNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKV 191
Query: 311 YRILD---GVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFD 367
LD G+E +P+V+ YN+ L + GK + LF D+ +PDV T+ + D
Sbjct: 192 RGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMD 251
Query: 368 GLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDL 420
+ +E VL M P N + ++ FE + L
Sbjct: 252 AYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL 304
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 80/357 (22%), Positives = 144/357 (40%), Gaps = 21/357 (5%)
Query: 50 LIITKLGRAKMLPEMEQVLHQLHLDTRHRVPEP-LLCHVITFYARARQPSRAVQTFLSIP 108
L+ +LG++ + +V + R +P+ + +I+ + Q A+ F +
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQ-KQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMK 160
Query: 109 SFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAG--------EFGAPDACTYNILIRAS 160
+ C+ +N L+ A L R D L G E P+ TYNIL+RA
Sbjct: 161 NSGCRPDASVYNALITAHLHTR--DKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAF 218
Query: 161 CLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGC 220
G D+ LF ++ V PD TF ++ +N ++E + M R + +
Sbjct: 219 AQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM-RSNECKPD 277
Query: 221 VTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLE 280
+ + LI K E + +++ K +N++I KA ++A V +
Sbjct: 278 IITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFK 337
Query: 281 EMREGGCEWNSVT--CNVMIGEYCRENNFEEAYRILDGVEGVKPDVIG---YNVFLGWLC 335
+M + + +T C +M+ YC + A I + V G V+ N L C
Sbjct: 338 KMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEV-GESDRVLKASTLNAMLEVYC 394
Query: 336 KEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
+ G + EA LFH+ PD TY+ L+ + + +++ +M G P
Sbjct: 395 RNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVP 451
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 7/208 (3%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
A T+N +I ++ L EM G P+ T +++ L+ E
Sbjct: 385 ANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKE 444
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
+ R + C+ ++ +L+ K GE+ A R+ D M K+ D Y +LI+
Sbjct: 445 FHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKR----DKVTYTSLIDGY 500
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE---GVKPD 323
+ GK E AL ++M G + + VT ++ N E + + +E G++
Sbjct: 501 GRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLR 560
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
+ Y+ + C+ G +A D+FH +P
Sbjct: 561 LEHYSCMVDLYCRAGYLDKARDIFHTIP 588
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 7/208 (3%)
Query: 147 APDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFE 206
A T+N +I ++ L EM G P+ T +++ L+ E
Sbjct: 385 ANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKE 444
Query: 207 LKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINAL 266
+ R + C+ ++ +L+ K GE+ A R+ D M K+ D Y +LI+
Sbjct: 445 FHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKR----DKVTYTSLIDGY 500
Query: 267 FKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVE---GVKPD 323
+ GK E AL ++M G + + VT ++ N E + + +E G++
Sbjct: 501 GRLGKGEVALAWFKDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLR 560
Query: 324 VIGYNVFLGWLCKEGKWSEAMDLFHDMP 351
+ Y+ + C+ G +A D+FH +P
Sbjct: 561 LEHYSCMVDLYCRAGYLDKARDIFHTIP 588
>AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:10338723-10341007 REVERSE
LENGTH=390
Length = 390
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 119/287 (41%), Gaps = 47/287 (16%)
Query: 148 PDACTYNILIRASCLRGHADRAFELFDEMRSRG-VRPDQATFGTLIHRLCENSRLREAFE 206
P+ + N++I+A C +G D A EL+ + G + P T+ L L RL EA +
Sbjct: 106 PNMLSCNLIIKAHCDQGSVDHALELYRHILLDGSLAPGIETYRILTKALVGAKRLDEACD 165
Query: 207 LKEEMFR-EFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKL-------DAAL 258
+ M R +F +Y LI+G G+ A +I +E+ KL A+
Sbjct: 166 VVRSMSRCDF------AVYDILIRGFLDKGKFVRASQIFEELKGPNSKLPWRNYHKAIAI 219
Query: 259 YN-TLINALFKAGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRI-LDG 316
+N + ++ FK GK EEA+ + + N+++ N ++ EA+ + LD
Sbjct: 220 FNVSFMDYWFKQGKDEEAMEIFATLEHAEL-LNTISGNGVLKCLVEHGRKTEAWELFLDM 278
Query: 317 VEGVKPDVIG-----------------------YNVFLGWLCKEGKWSEAMDLFHDM--- 350
+E + +G Y + LC++G EA LF DM
Sbjct: 279 IEICDSETVGIIMSKEGFFGEKTIPFERVRRTCYTRMIASLCQQGNMLEAEKLFADMFAD 338
Query: 351 ---PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLS 394
PDV T+R + +G + + +A+ L++M LS
Sbjct: 339 VDGDDLLAGPDVSTFRAMINGYVKVGRVDDAIKTLNKMKISNLRKLS 385
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/442 (20%), Positives = 173/442 (39%), Gaps = 59/442 (13%)
Query: 11 RLSSLLRSQKDPSVAFQLFLNPNPQTNHRPFRHSLLSYDLIITKLGRAKMLPEMEQVLH- 69
+L S+L + P A Q+F N R + +Y I LG+A +L E+ +V+
Sbjct: 260 KLLSVLGFARRPQEALQIF---NQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIER 316
Query: 70 ------QLHLDTRHRVPEPLLCHVITFYARARQPSRAVQTFLSIPSFRCQRTLKSFNTLL 123
+L + R + +P+L +P V +N +L
Sbjct: 317 MRQKPTKLTKNLRQKNWDPVL-----------EPDLVV-----------------YNAIL 348
Query: 124 HALLTCRQFDAVTELAARAGEFG-APDACTYNILIRASCLRGHADRAFELFDEMRSRGVR 182
+A + Q+ AV+ + + G P+ TY + + G DR + F +M+S G
Sbjct: 349 NACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEA 408
Query: 183 PDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFR 242
P T+ L+ L ++ EA E +M ++ + G ++Y L +C G R
Sbjct: 409 PKAITYKVLVRALWREGKIEEAVEAVRDMEQKGVI-GTGSVYYELACCLCNNG------R 461
Query: 243 IKDEMVKKGL--KLD-----AALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSVTCN 295
D M++ G +L+ + LI A G ++ + + + M++ C+ N T N
Sbjct: 462 WCDAMLEVGRMKRLENCRPLEITFTGLIAASLNGGHVDDCMAIFQYMKD-KCDPNIGTAN 520
Query: 296 VMIGEYCRENNFEEAYRILDGVEGVK-----PDVIGYNVFLGWLCKEGKWSEAMDLFHDM 350
+M+ Y R + F EA + + + K P+ Y+ L + +W ++ M
Sbjct: 521 MMLKVYGRNDMFSEAKELFEEIVSRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTM 580
Query: 351 PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFVSELCQEGNF 410
G D + ++ R ++ D ++ G P + +G+F
Sbjct: 581 VLSGYQMDQTKHASMLIEASRAGKWSLLEHAFDAVLEDGEIPHPLFFTELLCHATAKGDF 640
Query: 411 ELLSTVLSDLTSKGKICNEGIW 432
+ T+++ + +E W
Sbjct: 641 QRAITLINTVALASFQISEEEW 662
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 91/224 (40%), Gaps = 32/224 (14%)
Query: 223 IYTNLIKGVCKIGELSWAFRIKDEMV-KKGLKLDAALYNTLINALFKAGKKEEALRVLEE 281
+YT L+ + A +I ++M+ + L D A Y+ + L +AG +E L+V+E
Sbjct: 257 VYTKLLSVLGFARRPQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIER 316
Query: 282 MREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWS 341
MR+ + +T N+ R+ N++ ++PD++ YN L +W
Sbjct: 317 MRQKPTK---LTKNL------RQKNWDPV---------LEPDLVVYNAILNACVPTLQWK 358
Query: 342 EAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAPLSKNLNAFV 401
+F ++ + G P+ TY + + +F +M G AP + V
Sbjct: 359 AVSWVFVELRKNGLRPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITYKVLV 418
Query: 402 SELCQEGNFELLSTVLSDLTSKGKI-------------CNEGIW 432
L +EG E + D+ KG I CN G W
Sbjct: 419 RALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRW 462
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 112/282 (39%), Gaps = 42/282 (14%)
Query: 144 EFGAPDACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLRE 203
E D T+N +I C G D AF+LF+EM+ V PD+ ++ +R
Sbjct: 171 EMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRY 230
Query: 204 -------------------------------AFELKEEMFREFKLEGCVTIYTNLIKGVC 232
++ E FR+ + + + T ++ G
Sbjct: 231 NRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRN-LFVSTAMVSGYS 289
Query: 233 KIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCEWNSV 292
K G L A I D+ KK D + T+I+A ++ +EALRV EEM G + + V
Sbjct: 290 KCGRLDDAQVIFDQTEKK----DLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVV 345
Query: 293 TCNVMIGEYCRENNFEEAYRILD--GVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFHDM 350
+ +I ++A + V G++ ++ N + K G D+F M
Sbjct: 346 SMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKM 405
Query: 351 PRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFKGYAP 392
PRR +VV++ ++ + L + +A+ + M + P
Sbjct: 406 PRR----NVVSWSSMINALSMHGEASDALSLFARMKQENVEP 443
>AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22535729-22536940 FORWARD
LENGTH=403
Length = 403
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 131/308 (42%), Gaps = 52/308 (16%)
Query: 120 NTLLHALLTCRQFD-AVTELAARAGEFGA-PDACTYNILIRASCLRGHADRAFELFDEMR 177
N+++ A+ + +++D A++ E P+ + +++I+A C +GH D A EL+ +
Sbjct: 92 NSVIGAMCSAKRYDDAISLFNYFFNESQTLPNTLSCDLIIKAHCDQGHVDDALELYRHIL 151
Query: 178 SRG-VRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVT--IYTNLIKGVCKI 234
G V P T+ L L + R EA L M C + +Y LI+G I
Sbjct: 152 LDGRVAPGIETYMILAKALVDAKRFDEACVLARSM-------SCCSFMVYDILIRGFLDI 204
Query: 235 GELSWAFRIKDEMVKKGL----------KLDAALYNTLINALFKAGKKEEALRVLEEMRE 284
G A +I +E+ KGL K +A + +N FK GK EEA+ +L + +
Sbjct: 205 GNFVKASQIFEEL--KGLDSKLPGREYHKANAIFNVSFMNYWFKQGKDEEAMEILANLED 262
Query: 285 GGCEWNSVTCNVMIGEYCRENNFEEAYRI----LDGVEGVKPDVIG-------------- 326
N + N ++ + EA+ + ++ + D++
Sbjct: 263 AQV-LNPIVGNRVLQVLVKHGKKTEAWELFGEMIEICDSETVDIMSEYFSEKTVPFERLR 321
Query: 327 ---YNVFLGWLCKEGKWSEAMDLFHDMPRRG------CAPDVVTYRTLFDGLCRWRQFRE 377
Y + LC+ GK S+A LF +M PD++ +R + +G + +
Sbjct: 322 KTCYRKMIVSLCEHGKVSDAEKLFAEMFTDVDGGDLLVGPDLLIFRAMINGYVSVGRVDD 381
Query: 378 AVVVLDEM 385
A+ L++M
Sbjct: 382 AIKTLNKM 389
>AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:14320668-14322398 FORWARD
LENGTH=284
Length = 284
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 47/268 (17%)
Query: 118 SFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIRASCLRGHADRAFELFDEMR 177
SF L +L + DA+ R +G+ YN L+ + LR + ++ + +EM+
Sbjct: 21 SFIETLASLRRTLEADALFHEVVRFMIYGSYSVRLYNALV-SRYLR--KEVSWRVVNEMK 77
Query: 178 SRGVRPDQATFGTLIHRLCENSRLREAFELKEEMFREFKLEGCVTIYTNLIKGVCKIGEL 237
R R + +G +I +N ++A + EE+ RE L V IY ++I K GEL
Sbjct: 78 KRKFRLNSFVYGKIIRIYRDNGMWKKALGIVEEI-REIGLPMDVEIYNSVIDTFGKYGEL 136
Query: 238 S-----WAFRIKDEMVKK----GLKLDAALYNTLINALFKAGKKEEALRVLEEMREGGCE 288
+F E+V K G+ A L+ TL NA + G ++ ++VL+ M G E
Sbjct: 137 DEELQFGSFEDIGELVGKLKSQGVAPSANLFCTLANAYAQQGLCKQTVKVLKMMENEGIE 196
Query: 289 WNSVTCNVMIGEYCRENNFEEAYRILDGVEGVKPDVIGYNVFLGWLCKEGKWSEAMDLFH 348
N + NV+I N F A GK EA+ ++H
Sbjct: 197 PNLIMLNVLI------NAFGTA---------------------------GKHMEALSIYH 223
Query: 349 DMPRR-GCAPDVVTYRTLFDGLCRWRQF 375
+ PDVVTY TL R +++
Sbjct: 224 HIKETVWIHPDVVTYSTLMKAFTRAKKY 251
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 123/297 (41%), Gaps = 26/297 (8%)
Query: 99 RAVQTFLSIPSFRCQRTLKSFNTLLHALLTCRQFDAVTELAARAGEFGAPDACTYNILIR 158
+ + F I F C + N++L+ C D V + + D ++N +I
Sbjct: 164 QCLHDFAVIYGFDCD--IAVMNSMLNLYCKC---DHVGDAKDLFDQMEQRDMVSWNTMIS 218
Query: 159 ASCLRGHADRAFELFDEMRSRGVRPDQATFG---TLIHRLC--ENSRLREAFELKEEMFR 213
G+ +L MR G+RPDQ TFG ++ +C E R+ +K
Sbjct: 219 GYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDV 278
Query: 214 EFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFKAGKKE 273
+ L+ T LI K G+ ++R+ + + K D + +I+ L + G+ E
Sbjct: 279 DMHLK------TALITMYLKCGKEEASYRVLETIPNK----DVVCWTVMISGLMRLGRAE 328
Query: 274 EALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIGYNVFL 331
+AL V EM + G + +S ++ + +F+ + V G D N +
Sbjct: 329 KALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLI 388
Query: 332 GWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMMFK 388
K G +++ +F M R D+V++ + G + +A+++ +EM FK
Sbjct: 389 TMYAKCGHLDKSLVIFERMNER----DLVSWNAIISGYAQNVDLCKALLLFEEMKFK 441
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/307 (19%), Positives = 125/307 (40%), Gaps = 14/307 (4%)
Query: 149 DACTYNILIRASCLRGHADRAFELFDEMRSRGVRPDQATFGTLIHRLCENSRLREAFELK 208
D + +I G A L +EMR +G++P T ++ + E ++L +
Sbjct: 111 DVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQL----QCL 166
Query: 209 EEMFREFKLEGCVTIYTNLIKGVCKIGELSWAFRIKDEMVKKGLKLDAALYNTLINALFK 268
+ + + + + +++ CK + A + D+M ++ D +NT+I+
Sbjct: 167 HDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR----DMVSWNTMISGYAS 222
Query: 269 AGKKEEALRVLEEMREGGCEWNSVTCNVMIGEYCRENNFEEAYRILDGV--EGVKPDVIG 326
G E L++L MR G + T + + E + + G D+
Sbjct: 223 VGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHL 282
Query: 327 YNVFLGWLCKEGKWSEAMDLFHDMPRRGCAPDVVTYRTLFDGLCRWRQFREAVVVLDEMM 386
+ K GK + + +P + DVV + + GL R + +A++V EM+
Sbjct: 283 KTALITMYLKCGKEEASYRVLETIPNK----DVVCWTVMISGLMRLGRAEKALIVFSEML 338
Query: 387 FKGYAPLSKNLNAFVSELCQEGNFELLSTVLSDLTSKGKICNEGIWDVVLSMVCKPEKVP 446
G S+ + + V+ Q G+F+L ++V + G + + +++M K +
Sbjct: 339 QSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLD 398
Query: 447 ESFELLD 453
+S + +
Sbjct: 399 KSLVIFE 405