Miyakogusa Predicted Gene

Lj3g3v0423990.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0423990.1 Non Chatacterized Hit- tr|D7SX10|D7SX10_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,56.58,4e-19,RecA protein, C-terminal domain,DNA recombination and
repair protein RecA, C-terminal; RecA,DNA reco,CUFF.40685.1
         (78 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79050.1 | Symbols:  | recA DNA recombination family protein ...    76   4e-15

>AT1G79050.1 | Symbols:  | recA DNA recombination family protein |
           chr1:29737084-29740140 REVERSE LENGTH=439
          Length = 439

 Score = 76.3 bits (186), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/60 (58%), Positives = 45/60 (75%)

Query: 1   MMDIVLKKGSWYSYGDQRLGQGRDKAIQYLNENPHLLHEVEKIVRSSLIDGTNQTSLGYM 60
           +M++V+KKGSWYSY DQRLGQGR+KA+Q+L ENP L  E+EK VR  ++DG    S   M
Sbjct: 358 IMEVVVKKGSWYSYEDQRLGQGREKALQHLRENPALQDEIEKKVRLLMLDGEVHRSTPLM 417