Miyakogusa Predicted Gene

Lj3g3v0421680.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0421680.1 Non Chatacterized Hit- tr|I3SVJ6|I3SVJ6_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.5,0,Mss4-like,Mss4-like; TIGR00357: methionine-R-sulfoxide
reductase,Peptide methionine sulphoxide reduc,CUFF.40662.1
         (201 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G53670.1 | Symbols: MSRB1, ATMSRB1 | methionine sulfoxide red...   240   5e-64
AT1G53670.2 | Symbols: MSRB1, ATMSRB1 | methionine sulfoxide red...   223   5e-59
AT4G04800.1 | Symbols: ATMSRB3, MSRB3 | methionine sulfoxide red...   109   1e-24
AT4G21840.1 | Symbols: ATMSRB8, MSRB8 | methionine sulfoxide red...   105   2e-23
AT4G21830.2 | Symbols: ATMSRB7, MSRB7 | methionine sulfoxide red...   105   3e-23
AT4G21830.1 | Symbols: ATMSRB7, MSRB7 | methionine sulfoxide red...   104   4e-23
AT4G04830.1 | Symbols: ATMSRB5, MSRB5 | methionine sulfoxide red...   103   7e-23
AT4G21850.1 | Symbols: ATMSRB9, MSRB9 | methionine sulfoxide red...   103   9e-23
AT4G21860.3 | Symbols: MSRB2 | methionine sulfoxide reductase B ...   102   1e-22
AT4G21860.1 | Symbols: MSRB2 | methionine sulfoxide reductase B ...   102   1e-22
AT4G04840.1 | Symbols: ATMSRB6, MSRB6 | methionine sulfoxide red...   101   4e-22
AT4G04810.1 | Symbols: ATMSRB4, MSRB4 | methionine sulfoxide red...    97   7e-21
AT4G04830.2 | Symbols: MSRB5 | methionine sulfoxide reductase B5...    81   6e-16
AT4G21860.2 | Symbols: MSRB2 | methionine sulfoxide reductase B ...    71   5e-13
AT4G21850.2 | Symbols: ATMSRB9, MSRB9 | methionine sulfoxide red...    71   6e-13

>AT1G53670.1 | Symbols: MSRB1, ATMSRB1 | methionine sulfoxide
           reductase B 1 | chr1:20036687-20038074 FORWARD
           LENGTH=202
          Length = 202

 Score =  240 bits (612), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 104/126 (82%), Positives = 120/126 (95%)

Query: 72  DYKSLSNDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESSSKF 131
           ++ SLS +EWKKRLT EQ+Y+TRQKGTERAFTGEYWN+KTPG YNC+CCDTPLF+SS+KF
Sbjct: 69  EFASLSENEWKKRLTPEQYYITRQKGTERAFTGEYWNSKTPGVYNCVCCDTPLFDSSTKF 128

Query: 132 NSGTGWPSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVFDDGPPPTGKRYCIN 191
           +SGTGWPSY QPIGNNVK+KLDLS+IFMPRQEV+CAVC+AHLGHVFDDGP PTGKRYC+N
Sbjct: 129 DSGTGWPSYYQPIGNNVKTKLDLSIIFMPRQEVVCAVCNAHLGHVFDDGPRPTGKRYCLN 188

Query: 192 SASLKL 197
           SA+LKL
Sbjct: 189 SAALKL 194


>AT1G53670.2 | Symbols: MSRB1, ATMSRB1 | methionine sulfoxide
           reductase B 1 | chr1:20036687-20038074 FORWARD
           LENGTH=195
          Length = 195

 Score =  223 bits (569), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 99/126 (78%), Positives = 113/126 (89%), Gaps = 7/126 (5%)

Query: 72  DYKSLSNDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESSSKF 131
           ++ SLS +EWKKRLT EQ+Y+TRQKGTERAFTGEYWN+KTPG YNC+CCDTPLF+     
Sbjct: 69  EFASLSENEWKKRLTPEQYYITRQKGTERAFTGEYWNSKTPGVYNCVCCDTPLFD----- 123

Query: 132 NSGTGWPSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVFDDGPPPTGKRYCIN 191
             GTGWPSY QPIGNNVK+KLDLS+IFMPRQEV+CAVC+AHLGHVFDDGP PTGKRYC+N
Sbjct: 124 --GTGWPSYYQPIGNNVKTKLDLSIIFMPRQEVVCAVCNAHLGHVFDDGPRPTGKRYCLN 181

Query: 192 SASLKL 197
           SA+LKL
Sbjct: 182 SAALKL 187


>AT4G04800.1 | Symbols: ATMSRB3, MSRB3 | methionine sulfoxide
           reductase B3 | chr4:2439574-2440937 FORWARD LENGTH=176
          Length = 176

 Score =  109 bits (272), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 53/123 (43%), Positives = 74/123 (60%), Gaps = 5/123 (4%)

Query: 77  SNDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESSSKFNSGTG 136
            ++EW+  L+ EQF + RQKGTE   TGEY N    G Y C+ C+ PL++S++KFN+G G
Sbjct: 50  GDEEWRAILSPEQFRILRQKGTEYPGTGEYVNFDKEGVYGCVGCNAPLYKSTTKFNAGCG 109

Query: 137 WPSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVF--DDGPPPTGKRYCINSAS 194
           WP++ + I   +    D       R E+ CA C  HLGHVF  +    PT +R+C+NS S
Sbjct: 110 WPAFFEGIPGAITRTTDPD---GRRIEINCATCGGHLGHVFKGEGFATPTDERHCVNSVS 166

Query: 195 LKL 197
           LK 
Sbjct: 167 LKF 169


>AT4G21840.1 | Symbols: ATMSRB8, MSRB8 | methionine sulfoxide
           reductase B8 | chr4:11587231-11588178 REVERSE LENGTH=143
          Length = 143

 Score =  105 bits (262), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/124 (41%), Positives = 75/124 (60%), Gaps = 5/124 (4%)

Query: 78  NDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESSSKFNSGTGW 137
           ++EW+  L+ EQF V R KGT++   GE+      GTY+C  C T L++S++KF+SG GW
Sbjct: 18  DEEWRAVLSPEQFRVLRLKGTDKRGKGEFTKKFEEGTYSCAGCGTALYKSTTKFDSGCGW 77

Query: 138 PSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVF--DDGPPPTGKRYCINSASL 195
           P++   I   +K   +       R E+ CAVCD HLGHVF  +    PT +R+C+NS SL
Sbjct: 78  PAFFDAIPGAIKQTPEAG---GRRMEITCAVCDGHLGHVFKGEGYSTPTDQRHCVNSVSL 134

Query: 196 KLKT 199
           K  +
Sbjct: 135 KFAS 138


>AT4G21830.2 | Symbols: ATMSRB7, MSRB7 | methionine sulfoxide
           reductase B7 | chr4:11584565-11585247 REVERSE LENGTH=141
          Length = 141

 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 52/124 (41%), Positives = 75/124 (60%), Gaps = 5/124 (4%)

Query: 78  NDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESSSKFNSGTGW 137
           ++EW+  L+ EQF V R KGT++   GE+      GTY+C  C T L++S++KF+SG GW
Sbjct: 16  DEEWRAVLSPEQFRVLRLKGTDKRGKGEFTKKFEEGTYSCAGCGTALYKSTTKFDSGCGW 75

Query: 138 PSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVF--DDGPPPTGKRYCINSASL 195
           P++   I   +K   +       R E+ CAVCD HLGHVF  +    PT +R+C+NS SL
Sbjct: 76  PAFFDAIPGAIKQTPEAG---GRRMEITCAVCDGHLGHVFKGEGYSTPTDQRHCVNSVSL 132

Query: 196 KLKT 199
           K  +
Sbjct: 133 KFSS 136


>AT4G21830.1 | Symbols: ATMSRB7, MSRB7 | methionine sulfoxide
           reductase B7 | chr4:11584565-11585256 REVERSE LENGTH=144
          Length = 144

 Score =  104 bits (259), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 52/124 (41%), Positives = 75/124 (60%), Gaps = 5/124 (4%)

Query: 78  NDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESSSKFNSGTGW 137
           ++EW+  L+ EQF V R KGT++   GE+      GTY+C  C T L++S++KF+SG GW
Sbjct: 19  DEEWRAVLSPEQFRVLRLKGTDKRGKGEFTKKFEEGTYSCAGCGTALYKSTTKFDSGCGW 78

Query: 138 PSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVF--DDGPPPTGKRYCINSASL 195
           P++   I   +K   +       R E+ CAVCD HLGHVF  +    PT +R+C+NS SL
Sbjct: 79  PAFFDAIPGAIKQTPEAG---GRRMEITCAVCDGHLGHVFKGEGYSTPTDQRHCVNSVSL 135

Query: 196 KLKT 199
           K  +
Sbjct: 136 KFSS 139


>AT4G04830.1 | Symbols: ATMSRB5, MSRB5 | methionine sulfoxide
           reductase B5 | chr4:2445902-2446872 FORWARD LENGTH=139
          Length = 139

 Score =  103 bits (257), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 50/123 (40%), Positives = 75/123 (60%), Gaps = 5/123 (4%)

Query: 77  SNDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESSSKFNSGTG 136
           + +EW+  L+ EQF + RQKGTE+  TGEY      G ++C+ C TPL++S++KF+SG G
Sbjct: 11  TEEEWRAVLSPEQFRILRQKGTEKPGTGEYDKFFEEGIFDCVGCKTPLYKSTTKFDSGCG 70

Query: 137 WPSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVF--DDGPPPTGKRYCINSAS 194
           WP++ + +   +    D       R E+ CA CD HLGHVF  +    PT +R+C+NS S
Sbjct: 71  WPAFFEGLPGAINRTPDPD---GRRTEITCAACDGHLGHVFKGEGYGNPTDERHCVNSVS 127

Query: 195 LKL 197
           +  
Sbjct: 128 ISF 130


>AT4G21850.1 | Symbols: ATMSRB9, MSRB9 | methionine sulfoxide
           reductase B9 | chr4:11591378-11592138 REVERSE LENGTH=143
          Length = 143

 Score =  103 bits (256), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 56/131 (42%), Positives = 75/131 (57%), Gaps = 8/131 (6%)

Query: 69  GSVDYKSLSNDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESS 128
           GSV  K   + +W+  L+ EQF V R+KGTE    GEY      G Y+C  C TPL++S+
Sbjct: 13  GSVQKK---DQDWRAILSPEQFRVLREKGTENRGKGEYTKLFDDGIYSCAGCATPLYKST 69

Query: 129 SKFNSGTGWPSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVF--DDGPPPTGK 186
           +KF+SG GWPS+   I   +K   +       R E+ CA CD HLGHV   +  P  T +
Sbjct: 70  TKFDSGCGWPSFFDAIPGAIKQTPEAG---GRRMEITCAACDGHLGHVVKGEGFPTATDE 126

Query: 187 RYCINSASLKL 197
           R+C+NS SLK 
Sbjct: 127 RHCVNSVSLKF 137


>AT4G21860.3 | Symbols: MSRB2 | methionine sulfoxide reductase B 2 |
           chr4:11600238-11601507 REVERSE LENGTH=202
          Length = 202

 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/122 (43%), Positives = 71/122 (58%), Gaps = 5/122 (4%)

Query: 78  NDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESSSKFNSGTGW 137
            +EW+  L+ EQF + RQKGTE   TGEY      G Y C  C TPL++S++KF+SG GW
Sbjct: 77  EEEWRAILSPEQFRILRQKGTEYPGTGEYNKVFDDGIYCCAGCGTPLYKSTTKFDSGCGW 136

Query: 138 PSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVF--DDGPPPTGKRYCINSASL 195
           P++   +   +    D       R E+ CA C  HLGHVF  +  P PT +R+C+NS SL
Sbjct: 137 PAFFDGLPGAITRTPDPD---GRRIEITCAACGGHLGHVFKGEGFPTPTDERHCVNSISL 193

Query: 196 KL 197
           K 
Sbjct: 194 KF 195


>AT4G21860.1 | Symbols: MSRB2 | methionine sulfoxide reductase B 2 |
           chr4:11600238-11601507 REVERSE LENGTH=202
          Length = 202

 Score =  102 bits (255), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 53/122 (43%), Positives = 71/122 (58%), Gaps = 5/122 (4%)

Query: 78  NDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESSSKFNSGTGW 137
            +EW+  L+ EQF + RQKGTE   TGEY      G Y C  C TPL++S++KF+SG GW
Sbjct: 77  EEEWRAILSPEQFRILRQKGTEYPGTGEYNKVFDDGIYCCAGCGTPLYKSTTKFDSGCGW 136

Query: 138 PSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVF--DDGPPPTGKRYCINSASL 195
           P++   +   +    D       R E+ CA C  HLGHVF  +  P PT +R+C+NS SL
Sbjct: 137 PAFFDGLPGAITRTPDPD---GRRIEITCAACGGHLGHVFKGEGFPTPTDERHCVNSISL 193

Query: 196 KL 197
           K 
Sbjct: 194 KF 195


>AT4G04840.1 | Symbols: ATMSRB6, MSRB6 | methionine sulfoxide
           reductase B6 | chr4:2449659-2451302 FORWARD LENGTH=153
          Length = 153

 Score =  101 bits (251), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 51/141 (36%), Positives = 82/141 (58%), Gaps = 6/141 (4%)

Query: 61  KIETQSGAGSVDYKSLSNDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICC 120
           K+ET++   +   K  SN+EW+  L+ EQF + R+K  E+  +GEY      G Y C+ C
Sbjct: 12  KMETKAAPEAGMIKK-SNEEWRTVLSPEQFKILREKSIEKRGSGEYVKLFEEGIYCCVGC 70

Query: 121 DTPLFESSSKFNSGTGWPSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVFDDG 180
             P+++S++KF+SG GWP++   I   +    + + +   R E+ C  CD HLGHV  + 
Sbjct: 71  GNPVYKSTTKFDSGCGWPAFFDAIPGAINRTEERAGL---RYEITCTKCDGHLGHVLKNE 127

Query: 181 --PPPTGKRYCINSASLKLKT 199
             P PT +R+C+NS +LK  +
Sbjct: 128 GFPTPTDERHCVNSVALKFSS 148


>AT4G04810.1 | Symbols: ATMSRB4, MSRB4 | methionine sulfoxide
           reductase B4 | chr4:2441412-2442567 FORWARD LENGTH=139
          Length = 139

 Score = 97.1 bits (240), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 5/123 (4%)

Query: 77  SNDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESSSKFNSGTG 136
           + +EW+  L+ EQF + RQKGTE   T EY      G ++CI C TPL++S++KF++G G
Sbjct: 11  TEEEWRAVLSPEQFRILRQKGTETPGTEEYDKFFEEGIFSCIGCKTPLYKSTTKFDAGCG 70

Query: 137 WPSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVF--DDGPPPTGKRYCINSAS 194
           WP++ + +   +    D       R E+ CAVCD HLGHV   +    PT +R C+NS S
Sbjct: 71  WPAFFEGLPGAINRAPDPD---GRRTEITCAVCDGHLGHVHKGEGYSTPTDERLCVNSVS 127

Query: 195 LKL 197
           +  
Sbjct: 128 INF 130


>AT4G04830.2 | Symbols: MSRB5 | methionine sulfoxide reductase B5 |
           chr4:2445902-2446872 FORWARD LENGTH=129
          Length = 129

 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 15/123 (12%)

Query: 77  SNDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESSSKFNSGTG 136
           + +EW+  L+ EQ          +  TGEY      G ++C+ C TPL++S++KF+SG G
Sbjct: 11  TEEEWRAVLSPEQ----------KPGTGEYDKFFEEGIFDCVGCKTPLYKSTTKFDSGCG 60

Query: 137 WPSYDQPIGNNVKSKLDLSVIFMPRQEVLCAVCDAHLGHVF--DDGPPPTGKRYCINSAS 194
           WP++ + +   +    D       R E+ CA CD HLGHVF  +    PT +R+C+NS S
Sbjct: 61  WPAFFEGLPGAINRTPDPD---GRRTEITCAACDGHLGHVFKGEGYGNPTDERHCVNSVS 117

Query: 195 LKL 197
           +  
Sbjct: 118 ISF 120


>AT4G21860.2 | Symbols: MSRB2 | methionine sulfoxide reductase B 2 |
           chr4:11600282-11601507 REVERSE LENGTH=184
          Length = 184

 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 31/63 (49%), Positives = 42/63 (66%)

Query: 78  NDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESSSKFNSGTGW 137
            +EW+  L+ EQF + RQKGTE   TGEY      G Y C  C TPL++S++KF+SG GW
Sbjct: 77  EEEWRAILSPEQFRILRQKGTEYPGTGEYNKVFDDGIYCCAGCGTPLYKSTTKFDSGCGW 136

Query: 138 PSY 140
           P++
Sbjct: 137 PAF 139


>AT4G21850.2 | Symbols: ATMSRB9, MSRB9 | methionine sulfoxide
           reductase B9 | chr4:11591548-11592138 REVERSE LENGTH=121
          Length = 121

 Score = 70.9 bits (172), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 4/91 (4%)

Query: 69  GSVDYKSLSNDEWKKRLTNEQFYVTRQKGTERAFTGEYWNTKTPGTYNCICCDTPLFESS 128
           GSV  K   + +W+  L+ EQF V R+KGTE    GEY      G Y+C  C TPL++S+
Sbjct: 13  GSVQKK---DQDWRAILSPEQFRVLREKGTENRGKGEYTKLFDDGIYSCAGCATPLYKST 69

Query: 129 SKFNSGTGWPSYDQPIGNNVK-SKLDLSVIF 158
           +KF+SG GWPS+   I   +K + +D+   F
Sbjct: 70  TKFDSGCGWPSFFDAIPGAIKQTVIDIFFFF 100