Miyakogusa Predicted Gene
- Lj3g3v0397270.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0397270.1 gene.Ljchr3_pseudomol_20120830.path1.gene591.1
(440 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G06240.1 | Symbols: | F-box family protein | chr3:1887336-18... 90 3e-18
AT3G23880.1 | Symbols: | F-box and associated interaction domai... 88 9e-18
AT1G33530.1 | Symbols: | F-box family protein | chr1:12159884-1... 76 5e-14
AT1G11270.2 | Symbols: | F-box and associated interaction domai... 75 7e-14
AT1G11270.1 | Symbols: | F-box and associated interaction domai... 75 7e-14
AT4G12560.2 | Symbols: CPR30 | F-box and associated interaction ... 74 3e-13
AT4G12560.1 | Symbols: CPR30 | F-box and associated interaction ... 74 3e-13
AT5G52610.1 | Symbols: | F-box and associated interaction domai... 69 5e-12
AT1G12870.1 | Symbols: | F-box and associated interaction domai... 64 3e-10
AT4G22390.1 | Symbols: | F-box associated ubiquitination effect... 62 7e-10
AT3G18910.1 | Symbols: ETP2 | EIN2 targeting protein2 | chr3:652... 58 1e-08
AT2G16220.1 | Symbols: | F-box and associated interaction domai... 56 5e-08
AT1G12855.1 | Symbols: | F-box family protein | chr1:4382223-43... 55 7e-08
AT2G07140.2 | Symbols: | F-box and associated interaction domai... 55 1e-07
AT1G71320.1 | Symbols: | F-box family protein | chr1:26882485-2... 54 2e-07
AT2G07140.1 | Symbols: | F-box and associated interaction domai... 54 2e-07
AT3G20690.1 | Symbols: | F-box and associated interaction domai... 54 3e-07
AT3G62380.1 | Symbols: | CONTAINS InterPro DOMAIN/s: F-box asso... 53 3e-07
AT3G07870.1 | Symbols: | F-box and associated interaction domai... 53 4e-07
AT3G19410.1 | Symbols: | F-box and associated interaction domai... 52 7e-07
AT3G44120.1 | Symbols: | F-box and associated interaction domai... 52 9e-07
AT3G10430.1 | Symbols: | F-box and associated interaction domai... 51 2e-06
AT1G47340.1 | Symbols: | F-box and associated interaction domai... 51 2e-06
AT3G18320.1 | Symbols: | F-box and associated interaction domai... 50 3e-06
AT3G21410.1 | Symbols: | F-box and associated interaction domai... 50 3e-06
AT5G62660.1 | Symbols: | F-box and associated interaction domai... 50 3e-06
AT2G15640.1 | Symbols: | F-box family protein | chr2:6816792-68... 50 4e-06
AT2G41473.1 | Symbols: | F-box family protein | chr2:17294453-1... 49 5e-06
AT1G19160.1 | Symbols: | F-box family protein | chr1:6614162-66... 49 7e-06
>AT3G06240.1 | Symbols: | F-box family protein |
chr3:1887336-1888619 FORWARD LENGTH=427
Length = 427
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 182/441 (41%), Gaps = 104/441 (23%)
Query: 30 DLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQRENSHH 89
++I E+L LP KS+ R +CV K + +L SD F K+HL L+L+ E+
Sbjct: 39 EIITEILLRLPAKSIGRFRCVSKLFCTLS-SDPGFAKIHLD---------LILRNESVRS 88
Query: 90 DHREFCVTHLSGSSLS-------------------LVENPWI-----------SLAHNPR 119
HR+ V+ + SL L ++P I L + R
Sbjct: 89 LHRKLIVSSHNLYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDDRR 148
Query: 120 YRLKKGDRYH------VVGCCNGLICLHGYSVDSIFQQGWLSFWNPAT---RLMSEKLGC 170
LK + + +VG NGL+C+ +G + +NP T + + E
Sbjct: 149 VMLKLNAKSYRRNWVEIVGSSNGLVCISP-------GEGAVFLYNPTTGDSKRLPENFRP 201
Query: 171 FCVKTK--NFDVKLSFGYDNSTDTYKVVFFEI--EKIRRASLVSVFTLDGCNGWNGWRDI 226
V+ + NF FG+D TD YK+V E I AS+ S+ + WR I
Sbjct: 202 KSVEYERDNFQT-YGFGFDGLTDDYKLVKLVATSEDILDASVYSLKA-------DSWRRI 253
Query: 227 QNFPLLPFSYDDWGVNDGVHLSGTINWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETY 286
N L + ++D GVH +G I+W+ + + Q +++ D++TE +
Sbjct: 254 CN---LNYEHNDGSYTSGVHFNGAIHWVFTESRH-----------NQRVVVAFDIQTEEF 299
Query: 287 TLLSPPKGLDEVPSVVPS--VGVLMNCLCFSHDLEGTHFVIWQMKKFGDAKSWTQLLKVR 344
+ P ++ + VG L LC + H IW M ++G+AKSW+ ++R
Sbjct: 300 REMPVPDEAEDCSHRFSNFVVGSLNGRLCVVNSCYDVHDDIWVMSEYGEAKSWS---RIR 356
Query: 345 YQDLQREPLHSMFYCHYQLFPLCLHDGDTLILASYSDRYDGNEAILYDKRANTAERTALE 404
L R + PLC D +L DG + +LY+ N + +
Sbjct: 357 INLLYR-----------SMKPLCSTKNDEEVLL----ELDG-DLVLYNFETNASSNLGI- 399
Query: 405 TESKYILGFSSFYYVESLVSP 425
K GF + YVESL+SP
Sbjct: 400 CGVKLSDGFEANTYVESLISP 420
>AT3G23880.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:8622061-8623155
REVERSE LENGTH=364
Length = 364
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 148/341 (43%), Gaps = 50/341 (14%)
Query: 10 TVLSMNTPHPDNLPRTQLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIK--- 66
T M +PH NLP +++ E+L LPVKSLTR KCVC SW SLI +K
Sbjct: 4 TTREMFSPH--NLPL-----EMMEEILLRLPVKSLTRFKCVCSSWRSLISETLFALKHAL 56
Query: 67 -LHLHRSALHGK-PHLLLQRENSHHDHREFCVTHLSGSSLSLVENPWISLAHNPRYRLKK 124
L ++ K P+ ++ S + + C+ L +S V H+ L
Sbjct: 57 ILETSKATTSTKSPYGVIT--TSRYHLKSCCIHSLYNASTVYVSE------HDG--ELLG 106
Query: 125 GDRYHVVGCCNGLICLHGYSVDSIFQQGWLSFWNPATRLMSEKLGCFCVKTKNFD--VKL 182
D Y VVG C+GL+C H S++ WNP +L ++L ++T + + V
Sbjct: 107 RDYYQVVGTCHGLVCFHVDYDKSLY------LWNPTIKL-QQRLSSSDLETSDDECVVTY 159
Query: 183 SFGYDNSTDTYKVVFFEIEKIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWGVN 242
FGYD S D YKVV +++ V + T WR +FP D
Sbjct: 160 GFGYDESEDDYKVVAL----LQQRHQVKIETKIYSTRQKLWRSNTSFPSGVVVADK--SR 213
Query: 243 DGVHLSGTINWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSPPKGLDEVPSVV 302
G++++GT+N T + I+S D+ + + L P
Sbjct: 214 SGIYINGTLN------------WAATSSSSSWTIISYDMSRDEFKELPGPVCCGR-GCFT 260
Query: 303 PSVGVLMNCLCFSHDLEGTHFVIWQMKKFGDAKSWTQLLKV 343
++G L CL +G + +W MK+FG+ SW++LL +
Sbjct: 261 MTLGDLRGCLSMVCYCKGANADVWVMKEFGEVYSWSKLLSI 301
>AT1G33530.1 | Symbols: | F-box family protein |
chr1:12159884-12161314 FORWARD LENGTH=441
Length = 441
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 139/322 (43%), Gaps = 59/322 (18%)
Query: 26 QLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQRE 85
+L + L+ E+L LPVK L RLK + K W SLI SD HL L LL+++
Sbjct: 96 ELPDVLVEEILQRLPVKYLVRLKSISKGWKSLIESD------HLAEKHLR-----LLEKK 144
Query: 86 NSHHDHREFCVTHLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGLICLHGYSV 145
+ +E +T +S S+ + + D V G CNGL+C+ Y +
Sbjct: 145 ---YGLKEIKITVERSTSKSICIKFFSRRSGMNAINSDSDDLLRVPGSCNGLVCV--YEL 199
Query: 146 DSIFQQGWLSFWNPATRLMSEKLGCFCVKTKNFDVKLS--FGYDNSTDTYKV-VFFEIEK 202
DS++ + NP T G T KLS FG D T TYKV V + ++
Sbjct: 200 DSVY----IYLLNPMT-------GVTRTLTPPRGTKLSVGFGIDVVTGTYKVMVLYGFDR 248
Query: 203 IRRASLVSVFTLDGCNGWNGWRD-IQNFPLLPFSYDDWGVNDGVHLSGTINWMTSRDKSA 261
+ VF LD N WR + +P S + V ++G++ W+ + D S
Sbjct: 249 VGTV----VFDLDT----NKWRQRYKTAGPMPLSCIPTPERNPVFVNGSLFWLLASDFSE 300
Query: 262 PYYNPVTITVEQLGILSLDLRTETYTLLSPPKGLDEVPSVVPSVGVLM----NCLCFSHD 317
IL +DL TE + LS P +D+V V S + M + LC S+
Sbjct: 301 --------------ILVMDLHTEKFRTLSQPNDMDDVD--VSSGYIYMWSLEDRLCVSNV 344
Query: 318 LEGTHFVIWQMKKFGDAKSWTQ 339
+G H +W + + ++ W +
Sbjct: 345 RQGLHSYVWVLVQDELSEKWER 366
>AT1G11270.2 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:3785715-3786653
REVERSE LENGTH=312
Length = 312
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 138/335 (41%), Gaps = 66/335 (19%)
Query: 18 HPDNLPRTQLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGK 77
H ++ + L +D++ +L LPV+SL R KCV W S I S Q F + L R
Sbjct: 26 HCSSVVKLLLPHDVVGLILERLPVESLLRFKCVSNQWKSTIES-QCFQERQLIRRMESRG 84
Query: 78 PHLLLQRENSHHDHREFCVTHLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGL 137
P +L+ + D ++ + GSS+ +R G C GL
Sbjct: 85 PDVLVV--SFADDEDKYGRKAVFGSSIVST------------FRFPTLHTLICYGSCEGL 130
Query: 138 ICLHG-YSVDSIFQQGWLSFWNPATR------------LMSEKLGCFCVKTKNFDV---K 181
IC++ YS + + NPAT+ + +K + K +D K
Sbjct: 131 ICIYCVYSPNIVV--------NPATKWHRSCPLSNLQQFLDDKF-----EKKEYDFPTPK 177
Query: 182 LSFGYDNSTDTYKVV-FFEIEKIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWG 240
L+FG D TYK V + + R + + D N N WR + P P+ +D+
Sbjct: 178 LAFGKDKLNGTYKQVWLYNSSEFRLDDVTTCEVFDFSN--NAWRYVH--PASPYRINDY- 232
Query: 241 VNDGVHLSGTINWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSPPKGLDEVPS 300
D V+ G+++W+T +S ILS L TET+ +L L E
Sbjct: 233 -QDPVYSDGSVHWLTEGKESK--------------ILSFHLHTETFQVLCEAPFLRERDP 277
Query: 301 VVPSVGVLMNCLCFSHDLEGTHFVIWQMKKFGDAK 335
V S+ +L N LC S ++ G +IW + G K
Sbjct: 278 VGDSMCILDNRLCVS-EINGPAQLIWSLDSSGGNK 311
>AT1G11270.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:3785715-3786653
REVERSE LENGTH=312
Length = 312
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 138/335 (41%), Gaps = 66/335 (19%)
Query: 18 HPDNLPRTQLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGK 77
H ++ + L +D++ +L LPV+SL R KCV W S I S Q F + L R
Sbjct: 26 HCSSVVKLLLPHDVVGLILERLPVESLLRFKCVSNQWKSTIES-QCFQERQLIRRMESRG 84
Query: 78 PHLLLQRENSHHDHREFCVTHLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGL 137
P +L+ + D ++ + GSS+ +R G C GL
Sbjct: 85 PDVLVV--SFADDEDKYGRKAVFGSSIVST------------FRFPTLHTLICYGSCEGL 130
Query: 138 ICLHG-YSVDSIFQQGWLSFWNPATR------------LMSEKLGCFCVKTKNFDV---K 181
IC++ YS + + NPAT+ + +K + K +D K
Sbjct: 131 ICIYCVYSPNIVV--------NPATKWHRSCPLSNLQQFLDDKF-----EKKEYDFPTPK 177
Query: 182 LSFGYDNSTDTYKVV-FFEIEKIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWG 240
L+FG D TYK V + + R + + D N N WR + P P+ +D+
Sbjct: 178 LAFGKDKLNGTYKQVWLYNSSEFRLDDVTTCEVFDFSN--NAWRYVH--PASPYRINDY- 232
Query: 241 VNDGVHLSGTINWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSPPKGLDEVPS 300
D V+ G+++W+T +S ILS L TET+ +L L E
Sbjct: 233 -QDPVYSDGSVHWLTEGKESK--------------ILSFHLHTETFQVLCEAPFLRERDP 277
Query: 301 VVPSVGVLMNCLCFSHDLEGTHFVIWQMKKFGDAK 335
V S+ +L N LC S ++ G +IW + G K
Sbjct: 278 VGDSMCILDNRLCVS-EINGPAQLIWSLDSSGGNK 311
>AT4G12560.2 | Symbols: CPR30 | F-box and associated interaction
domains-containing protein | chr4:7441815-7443157
FORWARD LENGTH=413
Length = 413
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 30 DLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQRENSHH 89
D++ ++ LP K+L R + + K LI +D FI+ HLHR L HL++ +
Sbjct: 7 DIVNDIFLRLPAKTLVRCRALSKPCYHLI-NDPDFIESHLHR-VLQTGDHLMILLRGAL- 63
Query: 90 DHREFCVTHLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGLICLHGYSVDSIF 149
R + V S S+S VE+P +K+G V G NGLI L D
Sbjct: 64 --RLYSVDLDSLDSVSDVEHP-----------MKRGGPTEVFGSSNGLIGLSNSPTD--- 107
Query: 150 QQGWLSFWNPATRLMSEKLGCFCV------KTKNFDVKLSFGYDNSTDTYKVVFFEIEKI 203
L+ +NP+TR + +L + T+ + V GYD+ +D YKVV KI
Sbjct: 108 ----LAVFNPSTRQI-HRLPPSSIDLPDGSSTRGY-VFYGLGYDSVSDDYKVVRMVQFKI 161
Query: 204 RRASL--------VSVFTLDGCNGWNGWRDIQNFP-----LLPFSYDD-WGVNDGVHLSG 249
V VF+L N W+ I++ L F Y + GV
Sbjct: 162 DSEDELGCSFPYEVKVFSLKK----NSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGN 217
Query: 250 TINWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSPPKGL-DEVPSVVPSVGVL 308
+++W+ R +N I+ DL E + ++ P+ + + + +GVL
Sbjct: 218 SLHWVLPRRPGLIAFNL---------IVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVL 268
Query: 309 MNCLCFSHDLEGTHFVIWQMKKFGDAKSWTQLLKVR 344
CLC + + ++ +W MK++ SWT++ V+
Sbjct: 269 DGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVFTVQ 304
>AT4G12560.1 | Symbols: CPR30 | F-box and associated interaction
domains-containing protein | chr4:7441815-7443157
FORWARD LENGTH=413
Length = 413
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 144/336 (42%), Gaps = 59/336 (17%)
Query: 30 DLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQRENSHH 89
D++ ++ LP K+L R + + K LI +D FI+ HLHR L HL++ +
Sbjct: 7 DIVNDIFLRLPAKTLVRCRALSKPCYHLI-NDPDFIESHLHR-VLQTGDHLMILLRGAL- 63
Query: 90 DHREFCVTHLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGLICLHGYSVDSIF 149
R + V S S+S VE+P +K+G V G NGLI L D
Sbjct: 64 --RLYSVDLDSLDSVSDVEHP-----------MKRGGPTEVFGSSNGLIGLSNSPTD--- 107
Query: 150 QQGWLSFWNPATRLMSEKLGCFCV------KTKNFDVKLSFGYDNSTDTYKVVFFEIEKI 203
L+ +NP+TR + +L + T+ + V GYD+ +D YKVV KI
Sbjct: 108 ----LAVFNPSTRQI-HRLPPSSIDLPDGSSTRGY-VFYGLGYDSVSDDYKVVRMVQFKI 161
Query: 204 RRASL--------VSVFTLDGCNGWNGWRDIQNFP-----LLPFSYDD-WGVNDGVHLSG 249
V VF+L N W+ I++ L F Y + GV
Sbjct: 162 DSEDELGCSFPYEVKVFSLKK----NSWKRIESVASSIQLLFYFYYHLLYRRGYGVLAGN 217
Query: 250 TINWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSPPKGL-DEVPSVVPSVGVL 308
+++W+ R +N I+ DL E + ++ P+ + + + +GVL
Sbjct: 218 SLHWVLPRRPGLIAFNL---------IVRFDLALEEFEIVRFPEAVANGNVDIQMDIGVL 268
Query: 309 MNCLCFSHDLEGTHFVIWQMKKFGDAKSWTQLLKVR 344
CLC + + ++ +W MK++ SWT++ V+
Sbjct: 269 DGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVFTVQ 304
>AT5G52610.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr5:21346423-21347478
REVERSE LENGTH=351
Length = 351
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 93/205 (45%), Gaps = 29/205 (14%)
Query: 27 LHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQREN 86
+ DL+ E+L LPVK L R CVCK W + II + FI L+ RS+ +P+++
Sbjct: 2 ISEDLLVEILLRLPVKPLARCLCVCKLWAT-IIRSRYFINLYQSRSSTR-QPYVMF---- 55
Query: 87 SHHDHREFCVTH-LSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGLICLHGYSV 145
+ D C H S S SLV S A+N H C NGLIC+ S
Sbjct: 56 ALRDIFTSCRWHFFSSSQPSLVTKATCS-ANNSS---------HTPDCVNGLICVEYMS- 104
Query: 146 DSIFQQGWLSFWNPATRLMSEKLGCFCVKTKNFDVKLSFGYDNSTDTYKVVFFEIEKIRR 205
Q W+S NPATR L + F K GYD YKV+FF + +
Sbjct: 105 -----QLWIS--NPATR--KGVLVPQSAPHQKFR-KWYMGYDPINYQYKVLFFSKQYLLS 154
Query: 206 ASLVSVFTLDGCNGWNGWRDIQNFP 230
+ VFTL+G W +++N P
Sbjct: 155 PYKLEVFTLEGQGSWK-MIEVENIP 178
>AT1G12870.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:4387129-4389110
REVERSE LENGTH=416
Length = 416
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 152/399 (38%), Gaps = 76/399 (19%)
Query: 25 TQLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQR 84
+ L +D++ E+ LPVK+L R K + K W S + S + HL +
Sbjct: 31 SSLPDDVVEEIFLKLPVKALMRFKSLSKQWRSTL------------ESCYFSQRHLKIA- 77
Query: 85 ENSHHDHREFCV--------THLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVG--CC 134
E SH DH + + +S ++SL +S + + +G + + C
Sbjct: 78 ERSHVDHPKVMIITEKWNPDIEISFRTISLES---VSFLSSALFNFPRGFHHPIYASESC 134
Query: 135 NGLICLHGYSVDSIF----QQGWLSFWNPAT-RLMSEKLGCFCVKTKNFDVKLSFGYDNS 189
+G+ C+H I+ W PA ++ KL ++ + +
Sbjct: 135 DGIFCIHSPKTQDIYVVNPATRWFRQLPPARFQIFMHKLNPTLDTLRDMIPVNHLAFVKA 194
Query: 190 TDTYKVVFFEIEKIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWGVNDGVHLSG 249
TD YK+V+ R + VF N WR + P SY + +G
Sbjct: 195 TD-YKLVWLYNSDASRVTKCEVFDFKA----NAWRYLTCIP----SYRIYHDQKPASANG 245
Query: 250 TINWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSPPKGLDEVPSVVPSVGVLM 309
T+ W T YN ++ +++LD+ TE + LL P + + ++
Sbjct: 246 TLYWFTET------YN------AEIKVIALDIHTEIFRLLPKPSLIASSEPSHIDMCIID 293
Query: 310 NCLCFSHDLEGTHFV---IWQMKKFGDAKSWTQLLKVRYQDLQREPLHSMFYCHYQLFPL 366
N LC ++ EG + IW++K DA W ++ + L S YCH+ +
Sbjct: 294 NSLCM-YETEGDKKIIQEIWRLKSSEDA--WEKIYTIN--------LLSSSYCHFHVL-- 340
Query: 367 CLHDGDTLILASYSDRYDGNE-----AILYDKRANTAER 400
DG L Y + D E AI DK+ + R
Sbjct: 341 ---DGYNLTRLCYWTQKDLVESSTPVAIYKDKKIILSHR 376
>AT4G22390.1 | Symbols: | F-box associated ubiquitination effector
family protein | chr4:11813757-11815074 REVERSE
LENGTH=402
Length = 402
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 140/335 (41%), Gaps = 61/335 (18%)
Query: 29 NDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQRENSH 88
DLI E+ L +L + + + K SLI S + F+ HL R G+ ++L R
Sbjct: 6 TDLINEMFLRLRATTLVKCRVLSKPCFSLIDSPE-FVSSHLRRRLETGEHLMILLR---- 60
Query: 89 HDHREFCVTHL-SGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGLICLHGYSVDS 147
R L S ++S + +P L+ G V G NG+I L VD
Sbjct: 61 -GPRLLRTVELDSPENVSDIPHP-----------LQAGGFTEVFGSFNGVIGLCNSPVD- 107
Query: 148 IFQQGWLSFWNPATRLMSEKLGCFCVKTKNFDVKLSF-----GYDNSTDTYKVVFFEIEK 202
L+ +NP+TR + +L + D+ + GYD+ D +KVV K
Sbjct: 108 ------LAIFNPSTRKI-HRLPIEPIDFPERDITREYVFYGLGYDSVGDDFKVVRIVQCK 160
Query: 203 IRRASL-------VSVFTLDGCNGWNGWRDIQNFPLLPFSY-------DDWGVNDGVHLS 248
++ V VF+L N W + F +L SY +GV HL
Sbjct: 161 LKEGKKKFPCPVEVKVFSLKK-NSWKRVCLMFEFQILWISYYYHLLPRRGYGVVVNNHL- 218
Query: 249 GTINWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSPPKGLDEVPSVVPSVGVL 308
+W+ R + +N I+ DL ++ +LS P+ L ++ +GVL
Sbjct: 219 ---HWILPRRQGVIAFN---------AIIKYDLASDDIGVLSFPQELYIEDNM--DIGVL 264
Query: 309 MNCLCFSHDLEGTHFVIWQMKKFGDAKSWTQLLKV 343
C+C E +H +W +K++ D KSWT+L +V
Sbjct: 265 DGCVCLMCYDEYSHVDVWVLKEYEDYKSWTKLYRV 299
>AT3G18910.1 | Symbols: ETP2 | EIN2 targeting protein2 |
chr3:6521760-6522926 FORWARD LENGTH=388
Length = 388
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 118/278 (42%), Gaps = 49/278 (17%)
Query: 24 RTQLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQ 83
+ QL NDL+ E+L +P SL RL+ CK+WN L D+ H +SA + L
Sbjct: 5 QEQLPNDLVEEILCRVPATSLRRLRSTCKAWNRLFKGDRILASKHFEKSAKQFRSLSL-- 62
Query: 84 RENSHHDHREFCVT-HLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGLICLHG 142
+D+R F ++ +L G+S SL + H+ + + V+ C L+C
Sbjct: 63 ----RNDYRIFPISFNLHGNSPSLELKSELIDPHS-KNSAAPFEISRVIHCEGLLLC--- 114
Query: 143 YSVDSIFQQGWLSFWNP---ATRLMSEKLGCFCVKTKNFDVKLSFGYDNST--DTYKVVF 197
S + + WNP TR + + G F K ++FDV + D + +YK++
Sbjct: 115 ---SSQLDESRVVVWNPLTGETRWI--RTGDFRQKGRSFDVGYYYQKDKRSWIKSYKLLC 169
Query: 198 FEIEKIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWGV-NDGVHLSGTINW--M 254
+ +R + F + F D W + +D + G+I + +
Sbjct: 170 Y------------------------YRGTKYFEIYDFDSDSWRILDDIIAPRGSIGYSEL 205
Query: 255 TSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSPP 292
+ K Y+ +T E+ +SL L+ + YT S P
Sbjct: 206 SVSLKGNTYWFAKGVTEERPRTISL-LKFDFYTEKSVP 242
>AT2G16220.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr2:7030155-7031378
REVERSE LENGTH=407
Length = 407
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 27 LHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQREN 86
L NDLI EVLS LP+KS+ R CV K W S+ S F +L L RS+ KP LL
Sbjct: 6 LTNDLILEVLSRLPLKSVARFHCVSKRWASMFGSPY-FKELFLTRSS--AKPRLLFAIVQ 62
Query: 87 SHHDHREFCVTHLSGSSLSLVENPWISLAHNP---RYRLKKGDRYHVVGCCNGLICLHG 142
+ R F L SS +LV + +P R RY +G +GLI L+G
Sbjct: 63 -NGVWRFFSSPRLEKSSSTLVATAEFHMKLSPNNLRIYHDNTPRYFSIGYASGLIYLYG 120
>AT1G12855.1 | Symbols: | F-box family protein |
chr1:4382223-4383611 FORWARD LENGTH=462
Length = 462
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 138/351 (39%), Gaps = 71/351 (20%)
Query: 25 TQLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHL---HRSALHGKPHLL 81
+ L ND++ E+ LPVK++ +LK + K W S I S ++F + HL RS + ++
Sbjct: 69 SSLPNDVVEEIFLRLPVKAIIQLKSLSKQWRSTIES-RSFEERHLKIVERSRVDFPQVMV 127
Query: 82 LQRE--------NSHHDHREFCVTHLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGC 133
+ E N + + + S S++ + I+ ++R+ +
Sbjct: 128 MSEEYSLKGSKGNQPRPDTDIGFSTICLESASILSSTLITFPQGFQHRI------YASES 181
Query: 134 CNGLICLHGYSVDSIFQQGWLSFWNPATRLMSEKLGCFCVKTKNFDV---KLSFGYDNST 190
C+GL C+H +I+ NPATR + + F + KL D
Sbjct: 182 CDGLFCIHSLKTQAIY------VVNPATRWFRQ------LPPARFQILMQKLYPTQDTWI 229
Query: 191 DTYKVV-FFEIEKIRRASLVSVFTLDGCNG-------------WNGWRDIQNFPLLPFSY 236
D VV + K LV ++ D N N WR + P SY
Sbjct: 230 DIKPVVCYTAFVKANDYKLVWLYNSDASNPNLGVTKCEVFDFRANAWRYLTCTP----SY 285
Query: 237 DDWGVNDGVHLSGTINWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSPPKGLD 296
+ +G+I W T PY ++ +++LD+ TET+ +L PK
Sbjct: 286 RIFPDQVPAATNGSIYWFTE-----PYNG-------EIKVVALDIHTETFRVL--PKINP 331
Query: 297 EVPSVVP---SVGVLMNCLCFSHDLEGTHFV-IWQMKKFGDAKSWTQLLKV 343
+ S P + L N LC S T IW++K D SW ++ +
Sbjct: 332 AIASSDPDHIDMCTLDNGLCMSKRESDTLVQEIWRLKSSED--SWEKVYTI 380
>AT2G07140.2 | Symbols: | F-box and associated interaction
domains-containing protein | chr2:2957561-2958715
FORWARD LENGTH=384
Length = 384
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 133/331 (40%), Gaps = 51/331 (15%)
Query: 26 QLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQRE 85
+L DL+ E+LS++P SL RL+ CK WN L D+ F ++H ++A +P L +
Sbjct: 5 ELPKDLVEEILSFVPATSLKRLRSTCKGWNRLFKDDKRFTRIHTEKAAKQFQPLTLTK-- 62
Query: 86 NSHHDHREFCV--THLSGSSLSLVENPWISL----AHNPRYRLKKGDRYHVVGCCNGLIC 139
+ C +L G++ SL +SL + N + +H C+GL+
Sbjct: 63 -----NYRICPINVNLHGTTPSLEVKNEVSLLDPHSKNSAAQFNIDRVFH----CDGLL- 112
Query: 140 LHGYSVDSIFQQGWLSFWNPATRLMS-EKLGCFCVKTKNFDVKLSFGYDNST--DTYKVV 196
L DS F WNP T + +LG N + GYDN + +YK +
Sbjct: 113 LCTSQKDSRF-----VVWNPLTGVTKWIELG----DRYNEGMAFILGYDNKSCNKSYKAM 163
Query: 197 FFEIEKIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWGVNDGVHLSGTINWMTS 256
F + + S + F+ D WR I + + P Y D+ + L G W+
Sbjct: 164 SFNY--LDKDSEIYEFSSD------SWRVIDDI-IKPPHYMDY-FRECFSLKGNTYWLGI 213
Query: 257 RDKSAPYYNPVTITVEQLGILSLDLRTET--YTLLSPPKGLDEVPSVVPSVGVLMNCLCF 314
+ P +T ++ D TE Y L PP + + SV
Sbjct: 214 DRRRRPPDLRIT-------LIKFDFGTEKFGYVSLPPPCQVHGFEASNLSVVGDEKLSVL 266
Query: 315 SHDLEGTHFVIWQMKKFGDAK--SWTQLLKV 343
+ +W K G+A SW+++L +
Sbjct: 267 VQAGSTSKTEVWVTSKIGEANVVSWSKVLSL 297
>AT1G71320.1 | Symbols: | F-box family protein |
chr1:26882485-26883818 FORWARD LENGTH=392
Length = 392
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 149/369 (40%), Gaps = 55/369 (14%)
Query: 21 NLPRTQLHNDLIAE-VLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPH 79
N P+T D IAE + LP+KSL R K + K W S+I S F L R+ L P+
Sbjct: 7 NNPKTIFIPDDIAEGIFHHLPIKSLARFKVLSKKWTSMIES-TYFSHKRLIRTGL-PTPN 64
Query: 80 LLLQRENSHHDHREFCVTHLSGSSLSLVENPWISLAHNPR-YRLKKGDRYHVVGCCNGLI 138
+ + H V S S L+E +N + + + V+G C+GL+
Sbjct: 65 MKFLHISQHFTAN--FVEEYSNSITFLLETFSRDDQNNRKTFDESQNKTIQVLGSCDGLV 122
Query: 139 CLHGY-----------------SVDSIFQQGW---LSFWNPAT-----RLMSEKLGCFCV 173
L + + F Q W LS+ PA R +S+ + + +
Sbjct: 123 LLRIHDDFRSIYLINPTTKEHMKLSPEFMQ-WPFTLSYLTPAMANKPWRQLSQSVLDYDI 181
Query: 174 KTKNFDVKLSFGYDNSTDTYKVVF----FEIEKIRRASLVSVFTLDGCNGWNGWRDIQNF 229
K FG D +YKVV +EI + V +LD NG RD+ +
Sbjct: 182 SVKRMPSLAGFGKDIVKKSYKVVLIYTRYEIHDHEFKA--KVLSLD--NGEQ--RDVGFY 235
Query: 230 PLLPFSYDDWGVNDGVHLSGTINWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLL 289
+ + D V+ +G++ W+T + S Y +L++DL TE + +
Sbjct: 236 DIHHCIFCD--EQTSVYANGSLFWLTLKKLSQTSYQ----------LLAIDLHTEEFRWI 283
Query: 290 SPPKGLDEVPSVVPSVGVLMNCLCFSHDLEGTHFVIWQMKKFGDAKSWTQLLKVRYQDLQ 349
P+ D + + L LC S LE ++ V+W + + + W ++ ++ ++
Sbjct: 284 LLPE-CDTKYATNIEMWNLNERLCLSDVLESSNLVVWSLHQEYPTEKWEKIYSIKIDVIR 342
Query: 350 REPLHSMFY 358
LH F+
Sbjct: 343 TNQLHEKFW 351
>AT2G07140.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr2:2957561-2959851
FORWARD LENGTH=442
Length = 442
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 133/331 (40%), Gaps = 51/331 (15%)
Query: 26 QLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQRE 85
+L DL+ E+LS++P SL RL+ CK WN L D+ F ++H ++A +P L +
Sbjct: 5 ELPKDLVEEILSFVPATSLKRLRSTCKGWNRLFKDDKRFTRIHTEKAAKQFQPLTLTK-- 62
Query: 86 NSHHDHREFCV--THLSGSSLSLVENPWISL----AHNPRYRLKKGDRYHVVGCCNGLIC 139
+ C +L G++ SL +SL + N + +H C+GL+
Sbjct: 63 -----NYRICPINVNLHGTTPSLEVKNEVSLLDPHSKNSAAQFNIDRVFH----CDGLL- 112
Query: 140 LHGYSVDSIFQQGWLSFWNPATRLMS-EKLGCFCVKTKNFDVKLSFGYDNST--DTYKVV 196
L DS F WNP T + +LG N + GYDN + +YK +
Sbjct: 113 LCTSQKDSRF-----VVWNPLTGVTKWIELG----DRYNEGMAFILGYDNKSCNKSYKAM 163
Query: 197 FFEIEKIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWGVNDGVHLSGTINWMTS 256
F + + S + F+ D WR I + + P Y D+ + L G W+
Sbjct: 164 SFNY--LDKDSEIYEFSSD------SWRVIDDI-IKPPHYMDY-FRECFSLKGNTYWLGI 213
Query: 257 RDKSAPYYNPVTITVEQLGILSLDLRTET--YTLLSPPKGLDEVPSVVPSVGVLMNCLCF 314
+ P +T ++ D TE Y L PP + + SV
Sbjct: 214 DRRRRPPDLRIT-------LIKFDFGTEKFGYVSLPPPCQVHGFEASNLSVVGDEKLSVL 266
Query: 315 SHDLEGTHFVIWQMKKFGDAK--SWTQLLKV 343
+ +W K G+A SW+++L +
Sbjct: 267 VQAGSTSKTEVWVTSKIGEANVVSWSKVLSL 297
>AT3G20690.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:7231570-7232682
REVERSE LENGTH=370
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 108/258 (41%), Gaps = 55/258 (21%)
Query: 25 TQLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQR 84
+ L +DL+ E+LS LP+ SL ++ CK+WN L ++F H+ GK L++ +
Sbjct: 4 SDLPHDLVEEILSRLPLISLKAMRSTCKTWNVL-SKHRSFANKHIGNVTASGKRDLIMIK 62
Query: 85 ENSHHDHREFCVTHLSGSSLSLVENPW----ISLAHNPRYRLKKGD----RYHVVGCCNG 136
+ C + G +L ++N +S+ + L+ D V CNG
Sbjct: 63 D---------CKVYSIGVNLHGIQNNNNIIDLSIKNKGILHLENLDLIFKEIFNVFHCNG 113
Query: 137 LICLHGYSVDSIFQQGWLSFWNP--ATRLMSEKLGCFCVKTKNFDVKLSFGYDNSTDTYK 194
L+ L+G D + L NP R +++ F +FD KL+FGYD S +K
Sbjct: 114 LLLLYGSITDDSIR---LVVCNPYWGKREWVKRINNFA----SFD-KLAFGYDKSCGCHK 165
Query: 195 V--VF------FEIEKIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWGVNDGVH 246
+ VF EI +R S R + +FPL +D + DGV
Sbjct: 166 ILRVFDSYPNRLEIYNLRSNS----------------RMVSSFPL---KWDIAFMQDGVS 206
Query: 247 LSGTINWMTSRDKSAPYY 264
L G W +S Y
Sbjct: 207 LKGNTYWYAKDRRSEDCY 224
>AT3G62380.1 | Symbols: | CONTAINS InterPro DOMAIN/s: F-box
associated interaction domain (InterPro:IPR017451); BEST
Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G71320.1); Has 422 Blast hits to 419
proteins in 26 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 420; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink). |
chr3:23083609-23084852 REVERSE LENGTH=325
Length = 325
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 41/227 (18%)
Query: 129 HVVGCCNGLICLHGYSVDSIFQQGWLSFWNPATR----LMSEKLGCFCVKT---KNFDVK 181
++G CNG++C I+ G++ NPATR L E L + +T + +
Sbjct: 73 QIMGYCNGIVC--------IYDLGYIYLINPATRKLRILSPEFLREYTGRTGWSNDLPIN 124
Query: 182 LSFGYDNSTDTYKVV---FFEIEKIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDD 238
+ FG D T TYKV+ F+ ++ +L N NG R FP+ SY
Sbjct: 125 VGFGRDMVTGTYKVILMYLFDRNFVKTEAL---------NLKNGERRYVYFPI---SYGQ 172
Query: 239 WGVND--GVHLSGTINWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSPPKGLD 296
G ND + +G++ W+ D +Y T + + + ++DL TET+ + P
Sbjct: 173 LG-NDKRSIFANGSLYWLPKPD--VDFY-----TNQLIKLAAIDLHTETFRYVPLPSWYT 224
Query: 297 EVPSVVPSVGVLMNCLCFSHDLEGTHFVIWQMKKFGDAKSWTQLLKV 343
+ V + L + LC S L+ +W +++ + W ++ V
Sbjct: 225 KYCKSV-YLWSLKDSLCVSDVLQNPSVDVWSLQQEEPSVKWEKMFSV 270
>AT3G07870.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:2510871-2512124
FORWARD LENGTH=417
Length = 417
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 129/333 (38%), Gaps = 56/333 (16%)
Query: 27 LHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQREN 86
L D+IA++ S LP+ S+ RL VC+SW S++ + KP LLL ++
Sbjct: 28 LPEDIIADIFSRLPISSIARLMFVCRSWRSVLTQHGRLSSSSSSPT----KPCLLLHCDS 83
Query: 87 SHHDHREFCVTHLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGLICLHGYSVD 146
+ F LS E + R+ + + VVG CNGL+CL D
Sbjct: 84 PIRNGLHFL-------DLSEEEKRIKTKKFTLRFASSMPE-FDVVGSCNGLLCLS----D 131
Query: 147 SIFQQGWLSFWNPATRLMSEKLGCFCVKTKNFDVKLSFGYDNSTDTYKV---VFFE---- 199
S++ L +NP T E C K + ++ FG+ T YKV V+F
Sbjct: 132 SLYNDS-LYLYNPFTTNSLELPEC-SNKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSS 189
Query: 200 ----IEKIR-----RASLVSVFTLDG--CNGWNGWRDIQNFPLLPFSYDDWGVNDGVHLS 248
I + R + S V + TL + WR + P Y + ++
Sbjct: 190 NNNGIYRGRGRIQYKQSEVQILTLSSKTTDQSLSWRSLGKAP-----YKFVKRSSEALVN 244
Query: 249 GTINWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSPPK--GLDEVPSVVPSVG 306
G ++++T + P +S DL E + + P GL+ + +
Sbjct: 245 GRLHFVTRPRRHVP----------DRKFVSFDLEDEEFKEIPKPDCGGLNRTNHRLVN-- 292
Query: 307 VLMNCLCFSHDLEGTHFVIWQMKKFGDAKSWTQ 339
L CLC IW MK +G +SW +
Sbjct: 293 -LKGCLCAVVYGNYGKLDIWVMKTYGVKESWGK 324
>AT3G19410.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:6729585-6730706
FORWARD LENGTH=373
Length = 373
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 21/140 (15%)
Query: 26 QLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQRE 85
+L DLI E+L ++P L RL+ CK WN L D+ F K H ++A P +
Sbjct: 5 ELPKDLIEEILCYVPATYLKRLRSTCKGWNRLFKDDRRFAKKHYDKAAKQFLPLM----- 59
Query: 86 NSHHDHREFCVT----HLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGLICLH 141
+ E C H + SL + + PW+ ++ + ++ +H G L+C
Sbjct: 60 ---STNEELCAMSVNLHGTIPSLEVKDKPWLFVSDSKHCDIEISRIFHSGGL---LLCFS 113
Query: 142 GYSVDSIFQQGWLSFWNPAT 161
SI WNP T
Sbjct: 114 RDGEISII------VWNPLT 127
>AT3G44120.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:15878609-15879763
REVERSE LENGTH=384
Length = 384
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 132/331 (39%), Gaps = 51/331 (15%)
Query: 26 QLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQRE 85
+L DL+ E+L ++P SL RL+ CK WN L D+ F + H+ ++A +P L +
Sbjct: 5 ELPKDLVEEILCFVPATSLKRLRSSCKEWNRLFKDDKRFARKHIEKAAKQFQPLTLTK-- 62
Query: 86 NSHHDHREFCV--THLSGSSLSLVENPWISL----AHNPRYRLKKGDRYHVVGCCNGLIC 139
+ C +L G++ SL +SL + N + +H C+GL+
Sbjct: 63 -----NYRICPINVNLHGTTPSLEVKNEVSLVDPHSKNSAAQFNIDRVFH----CDGLL- 112
Query: 140 LHGYSVDSIFQQGWLSFWNPATRLMS-EKLGCFCVKTKNFDVKLSFGYDNST--DTYKVV 196
L DS F WNP T + +LG N + GYDN + +YK +
Sbjct: 113 LCTSQKDSRF-----VVWNPLTGVTKWIELG----DRYNEGMAFILGYDNKSCNKSYKAM 163
Query: 197 FFEIEKIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWGVNDGVHLSGTINWMTS 256
F + + S + F+ D WR I + + P Y D+ + L G W+
Sbjct: 164 SFNY--LDKDSEIYEFSSD------SWRVIDDI-IKPPHYMDY-FRECFSLKGNTYWLGI 213
Query: 257 RDKSAPYYNPVTITVEQLGILSLDLRTET--YTLLSPPKGLDEVPSVVPSVGVLMNCLCF 314
+ P +T ++ D TE Y L PP + + SV
Sbjct: 214 DRRRRPPDLRIT-------LIKFDFGTERFGYVSLPPPCQVHGFEASNLSVVGDEKLSVL 266
Query: 315 SHDLEGTHFVIWQMKKFGDAK--SWTQLLKV 343
+ +W K G+A SW+++L +
Sbjct: 267 VQGGSTSKTEVWVTSKIGEANVVSWSKVLSL 297
>AT3G10430.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:3242750-3243862
REVERSE LENGTH=370
Length = 370
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 107/272 (39%), Gaps = 58/272 (21%)
Query: 25 TQLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQR 84
+ L DLI E+L P +SL R K CK W LI +D+ F+ HL +S L+
Sbjct: 3 SSLPFDLILEILQRTPAESLLRFKSTCKKWYELISNDKRFMYKHLDKSTKR-----FLRI 57
Query: 85 ENSHHDHREFCVTHLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGLICLHGYS 144
EN VT + ++S + N L H +Y + C+GL+ G
Sbjct: 58 ENRERVQILDPVTEI--LAVSTIPN---ELRH----------KYFTLIHCDGLML--GMC 100
Query: 145 VDSIFQQGWLSFWNPATRLM-----SEKLGCFCVKTKNFDVKLSFGYDNS-TDTYKVVFF 198
+ + L+ WNP R + S L C+ L FGYD + D YK++ F
Sbjct: 101 YEELGSDPNLAVWNPVMRKIKWIKPSPPLVCYWGSD-----YLGFGYDKTFRDNYKILRF 155
Query: 199 ----EIEKIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWGVNDGVHLSGTINWM 254
+ + ++ + WR I+ F + DGV ++G++ W+
Sbjct: 156 TYLGDDDDDESYPKCQIYEFNS----GSWRSIE----AKFDGEIDVEVDGVSVNGSMYWI 207
Query: 255 TSRDKSAPYYNPVTITVEQLGILSLDLRTETY 286
++K ILS D ET+
Sbjct: 208 ELQEKKN-------------FILSFDFSKETF 226
>AT1G47340.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr1:17354123-17356494
REVERSE LENGTH=459
Length = 459
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 109/278 (39%), Gaps = 42/278 (15%)
Query: 25 TQLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQR 84
L +LI E+L LP KS+ R CV K W S+ +S F +L L RS+ +P LL
Sbjct: 35 VSLPKELILEILKRLPAKSVKRFHCVSKQWASM-LSCPHFRELFLTRSS-SAQPRLLFAI 92
Query: 85 ENSHHDHREFCVTHLSGSSLSLVENPWISLAHNPRYRLK----------KGDRYHVVGCC 134
E H ++ + L ++ S+ P + +K + DR G
Sbjct: 93 EK----HNQWSLFSLPQRLTPYEKSSSSSVVVTPEFHMKFPPDGMLIYPRHDRRFSFGYA 148
Query: 135 NGLICLHGYSVDSIFQQGWLSFWNPAT-RLMSEKLGCFCVKTKNFDVKLSFGYDNSTDTY 193
+GL+ +G ++ G NP T R S K +F FG+D Y
Sbjct: 149 SGLMYFYGMWINEHDYDGVPVICNPLTGRYASLPFLERYRKAFSF-----FGFDPIEKQY 203
Query: 194 KVVFFEIEKIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWGVNDGVHLSGTINW 253
KV+F V F G WR I+ S V+DG+ ++G + +
Sbjct: 204 KVLFMAYPSGPDHHTVLTFG----TGEMSWRKIEC------SVKHDIVSDGICINGVMYY 253
Query: 254 MTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSP 291
+ + + ++ D+R+ET++ + P
Sbjct: 254 LGDTSE----------FMTAFVVVCFDVRSETFSFIYP 281
>AT3G18320.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:6289227-6290383
REVERSE LENGTH=299
Length = 299
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 26 QLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQ 83
+L DL+ E+L ++P SL RL+ CK WN L D+ F + H+ ++A +P L +
Sbjct: 5 ELPKDLVEEILCFVPATSLKRLRSTCKGWNRLFKDDKRFARKHIEKAAKQFQPLTLTK 62
>AT3G21410.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr3:7536719-7537951
REVERSE LENGTH=410
Length = 410
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 123/342 (35%), Gaps = 82/342 (23%)
Query: 30 DLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQRENSHH 89
+L E+L +P KSL RLK CK W +L +D+ FI HL H + R N
Sbjct: 41 ELFEEILCRVPTKSLLRLKLTCKRWLAL-FNDKRFIYKHLALVREH------IIRTNQMV 93
Query: 90 DHREFCVTHLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGLICLHGYSVDSIF 149
V S SL P KG+ Y +V C L+C IF
Sbjct: 94 KIINPVVGACSSFSL-------------PNKFQVKGEIYTMVPCDGLLLC--------IF 132
Query: 150 QQGWLSFWNPATR-------LMSEKLGCFCVKTKNFDVKLSFGYDN-STDTYKV------ 195
+ G ++ WNP L GC C GYD S D+YK+
Sbjct: 133 ETGSMAVWNPCLNQVRWIFLLNPSFRGCSC---------YGIGYDGLSRDSYKILRFVNG 183
Query: 196 VFFEIEKIRRASL---VSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWGVN---DGVHLSG 249
VF + E S V ++ L N W+ + DW V G+ L G
Sbjct: 184 VFTKNEYANTGSYKPEVDIYELKS----NSWKTFK-------VSLDWHVVLRCKGLSLKG 232
Query: 250 TINWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSPPKGLDEVPSVVPSVGVLM 309
+ W+ ++ + I S + TET+ L +V +VV
Sbjct: 233 NMYWIAKWNRKPDIF-----------IQSFNFSTETFEPLCSLPVRYDVHNVVALSAFKG 281
Query: 310 NCLCFSHDLEGTHFV-IWQMKKFGDAKS--WTQLLKVRYQDL 348
+ L H + T + +W K + S WT+L V DL
Sbjct: 282 DNLSLLHQSKETSKIDVWVTNKVKNGVSILWTKLFSVTRPDL 323
>AT5G62660.1 | Symbols: | F-box and associated interaction
domains-containing protein | chr5:25156326-25157465
REVERSE LENGTH=379
Length = 379
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 45/283 (15%)
Query: 20 DNLPRTQLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPH 79
D L ++ DL+ E+L+ LP KSL R KCV K W+SLI S + F +L P
Sbjct: 34 DALVAPEIPLDLLIEILTKLPAKSLMRFKCVSKLWSSLIRS-RFFSNCYLTVKTPRRPPR 92
Query: 80 LLLQRENSHHDHREFCVTHLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNG--L 137
L + V HL +SL + P S+ + + ++ + G +
Sbjct: 93 LYMS-----------LVDHLLCNSLMVCHYPCESVLLSSSSSAESLEQNLTIAGMGGRNM 141
Query: 138 ICLHGYSVDSIFQQGWLSFWNPATR----LMSEKLGCFCVKTKNFDVKLSFGYDNSTDTY 193
+ L G + + + S +NP TR L + K K+ + FGYD D Y
Sbjct: 142 VVLRGLILYVVCRTA--SIYNPTTRQSVTLPAVKSNILAQKSHWNSLLYFFGYDPVLDQY 199
Query: 194 KVV----FFEIEKIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWGVNDGVHLSG 249
KVV F R S VF L+ W R + P LP G+ ++G
Sbjct: 200 KVVCTVALFSKRLKRITSEHWVFVLEPGGSWK--RIEFDQPHLP-------TRLGLCVNG 250
Query: 250 TINWMTSRDKSAPYYNPVTITVEQLGILSLDLRTETYTLLSPP 292
I ++ S K ++S D+R+E ++++ P
Sbjct: 251 VIYYLASTWKRRDI------------VVSFDVRSEEFSMIQGP 281
>AT2G15640.1 | Symbols: | F-box family protein |
chr2:6816792-6818072 REVERSE LENGTH=426
Length = 426
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 111/274 (40%), Gaps = 28/274 (10%)
Query: 25 TQLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQR 84
+ + NDL E+LS LP KS+ R CV K W S I F +L L RS+ KP LL
Sbjct: 4 STITNDLTVEILSRLPAKSVARFHCVSKQWGS-IFGSPYFKELFLTRSST--KPRLLFAM 60
Query: 85 ENSHHDHREFCVTHLSGSSLSLVENPW----ISLAHNPRYRLK-KGDRYHVVGCCNGLIC 139
++ + CV S +ENP+ +L + +K D+ ++ C +
Sbjct: 61 AEKVNEEKN-CVWRF--FSTPQLENPYEKSSSTLVAAAEFHVKFSPDKLYICHCYDLKYF 117
Query: 140 LHGYSVDSIFQQGWLSFWNPATRLMSEKLGCFCVKTKNFDVKLS---FGYDNSTDTYKVV 196
GY+ I+ G P + + G + + + + + FG+D YK +
Sbjct: 118 SIGYASGLIYLYGDRGEATPL--ICNPTTGRYAILPNRYTYRKAYSFFGFDPIDKQYKAL 175
Query: 197 FFEIEKIRRASLVSVFTLDGCNGWNGWRDIQNFPLLPFSYDDWGV-NDGVHLSGTINWMT 255
S + F G WR I P YD + ++G+ ++G + ++
Sbjct: 176 SIFYPSGPGHSKILTFGA----GHMKWRKIN----CPLRYDRHDIKSEGICINGVLYYLG 227
Query: 256 SRDKSAPYYNPVTITVEQLGILSLDLRTETYTLL 289
S + + V I+ D+R+E +T +
Sbjct: 228 STSDCVKDGHGI---VSDYVIVCFDIRSEKFTFI 258
>AT2G41473.1 | Symbols: | F-box family protein |
chr2:17294453-17294728 REVERSE LENGTH=91
Length = 91
Score = 49.3 bits (116), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 26 QLHNDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLH 68
+L DL+ E+L+ +PVK L R +CVCKSW SL D+ FI++H
Sbjct: 3 ELAFDLVIEILAKVPVKYLLRFRCVCKSWRSL-FQDERFIRMH 44
>AT1G19160.1 | Symbols: | F-box family protein |
chr1:6614162-6615214 REVERSE LENGTH=350
Length = 350
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 82/203 (40%), Gaps = 32/203 (15%)
Query: 29 NDLIAEVLSWLPVKSLTRLKCVCKSWNSLIISDQTFIKLHLHRSALHGKPHLLLQRENSH 88
D + E+L LPVKSL R CV K S II + FI L+ R++ + R+ +
Sbjct: 4 EDPLVEILLRLPVKSLARFLCVSKRCYS-IIRSRHFINLYQSRASTRESRVMFAFRDTNT 62
Query: 89 HDHREFCVTHLSGSSLSLVENPWISLAHNPRYRLKKGDRYHVVGCCNGLICLHGYSVDSI 148
F SS++ +++ Y + C NGLIC V+ +
Sbjct: 63 FFRWNFFSLSQPPSSVTNIDS----------------TSYCMPVCVNGLIC-----VEHM 101
Query: 149 FQQGWLSFWNPATRLMSEKLGCF--CVKTKNFDVKLSFGYDNSTDTYKVVFFEIEKIRRA 206
F+ W+ NP T+ K+ F C K F GYD YKV++ E +
Sbjct: 102 FRL-WIC--NPVTK----KITLFPDCGPRKQF-TTWYMGYDPINYQYKVLYLSREHLIAP 153
Query: 207 SLVSVFTLDGCNGWNGWRDIQNF 229
+V VFT W +NF
Sbjct: 154 YIVEVFTFGDEGSWRMIEADENF 176