Miyakogusa Predicted Gene

Lj3g3v0397260.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0397260.2 Non Chatacterized Hit- tr|I1KIA1|I1KIA1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4572
PE=,86.59,0,Per1,Per1-like; SUBFAMILY NOT NAMED,NULL;
PER1-RELATED,Per1-like,CUFF.40648.2
         (342 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G16560.3 | Symbols:  | Per1-like family protein | chr1:566894...   511   e-145
AT1G16560.2 | Symbols:  | Per1-like family protein | chr1:566894...   511   e-145
AT1G16560.1 | Symbols:  | Per1-like family protein | chr1:566894...   511   e-145
AT5G62130.1 | Symbols:  | Per1-like family protein | chr5:249506...   427   e-120
AT5G62130.2 | Symbols:  | Per1-like family protein | chr5:249506...   412   e-115
AT1G16560.4 | Symbols:  | Per1-like family protein | chr1:566923...   367   e-102

>AT1G16560.3 | Symbols:  | Per1-like family protein |
           chr1:5668945-5670343 FORWARD LENGTH=342
          Length = 342

 Score =  511 bits (1316), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 235/317 (74%), Positives = 267/317 (84%), Gaps = 4/317 (1%)

Query: 19  VIDASAGDVDPRYRDCIRQCQETGCVAQSCFPHCKFPSDGEHFDRPWYMQEPLYLQWKKW 78
           + +ASAGD DP YR C+ +C+ +GCV Q CFP C   SDG     PWY+QEPLYLQWKKW
Sbjct: 19  ISNASAGDADPDYRTCVSECEISGCVGQLCFPQCNSSSDGG----PWYIQEPLYLQWKKW 74

Query: 79  DCQNDCRYHCMLDREKERKLLNLVPVKYHGKWPFARIYGMQEAASVAFSALNLAMHFHGW 138
            CQ DCRY CM++RE ER+ L   PVKYHGKWPF R+ G+QE ASVAFS LNLAMHFHGW
Sbjct: 75  GCQGDCRYQCMVNRETERETLGQAPVKYHGKWPFKRVLGIQEPASVAFSVLNLAMHFHGW 134

Query: 139 VSFFILLYYKLPLKDGKEAYYEYAGLWHIYGLLSLNSWFWSAVFHSRDVDLTETLDYSSA 198
           +SFFI++YYKLPLK  + AYYEY GLWHIYGLLS+NSWFWSAVFHSRDVDLTE LDYSSA
Sbjct: 135 LSFFIMIYYKLPLKQDRTAYYEYVGLWHIYGLLSMNSWFWSAVFHSRDVDLTERLDYSSA 194

Query: 199 VILLGYSLILAILRSFNVRDEATRVMVSAPLIAFVITHVMYINFYKLDYGWNMIVCVVMA 258
           V +LG+SLILAILR+F++R EA RVMVSAP++AFV TH++YINFYKLDYGWNMIVCV M 
Sbjct: 195 VAILGFSLILAILRTFDIRVEAARVMVSAPILAFVTTHILYINFYKLDYGWNMIVCVAMG 254

Query: 259 VVQLVIWAVWAGLSGHPSRWKLWLVVIAGGLAMLLEIYDFPPYEGLLDAHALWHATTIPL 318
           V QL +WA WA +S HPS WKLW+VVIAGGLAMLLEIYDFPPYEG  DAH++WHA TIPL
Sbjct: 255 VSQLFLWARWAAVSSHPSNWKLWVVVIAGGLAMLLEIYDFPPYEGYFDAHSIWHAATIPL 314

Query: 319 TYIWWSFIRDDAEFRTS 335
           T +WWSFIRDDAEFRTS
Sbjct: 315 TILWWSFIRDDAEFRTS 331


>AT1G16560.2 | Symbols:  | Per1-like family protein |
           chr1:5668945-5670343 FORWARD LENGTH=342
          Length = 342

 Score =  511 bits (1316), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 235/317 (74%), Positives = 267/317 (84%), Gaps = 4/317 (1%)

Query: 19  VIDASAGDVDPRYRDCIRQCQETGCVAQSCFPHCKFPSDGEHFDRPWYMQEPLYLQWKKW 78
           + +ASAGD DP YR C+ +C+ +GCV Q CFP C   SDG     PWY+QEPLYLQWKKW
Sbjct: 19  ISNASAGDADPDYRTCVSECEISGCVGQLCFPQCNSSSDGG----PWYIQEPLYLQWKKW 74

Query: 79  DCQNDCRYHCMLDREKERKLLNLVPVKYHGKWPFARIYGMQEAASVAFSALNLAMHFHGW 138
            CQ DCRY CM++RE ER+ L   PVKYHGKWPF R+ G+QE ASVAFS LNLAMHFHGW
Sbjct: 75  GCQGDCRYQCMVNRETERETLGQAPVKYHGKWPFKRVLGIQEPASVAFSVLNLAMHFHGW 134

Query: 139 VSFFILLYYKLPLKDGKEAYYEYAGLWHIYGLLSLNSWFWSAVFHSRDVDLTETLDYSSA 198
           +SFFI++YYKLPLK  + AYYEY GLWHIYGLLS+NSWFWSAVFHSRDVDLTE LDYSSA
Sbjct: 135 LSFFIMIYYKLPLKQDRTAYYEYVGLWHIYGLLSMNSWFWSAVFHSRDVDLTERLDYSSA 194

Query: 199 VILLGYSLILAILRSFNVRDEATRVMVSAPLIAFVITHVMYINFYKLDYGWNMIVCVVMA 258
           V +LG+SLILAILR+F++R EA RVMVSAP++AFV TH++YINFYKLDYGWNMIVCV M 
Sbjct: 195 VAILGFSLILAILRTFDIRVEAARVMVSAPILAFVTTHILYINFYKLDYGWNMIVCVAMG 254

Query: 259 VVQLVIWAVWAGLSGHPSRWKLWLVVIAGGLAMLLEIYDFPPYEGLLDAHALWHATTIPL 318
           V QL +WA WA +S HPS WKLW+VVIAGGLAMLLEIYDFPPYEG  DAH++WHA TIPL
Sbjct: 255 VSQLFLWARWAAVSSHPSNWKLWVVVIAGGLAMLLEIYDFPPYEGYFDAHSIWHAATIPL 314

Query: 319 TYIWWSFIRDDAEFRTS 335
           T +WWSFIRDDAEFRTS
Sbjct: 315 TILWWSFIRDDAEFRTS 331


>AT1G16560.1 | Symbols:  | Per1-like family protein |
           chr1:5668945-5670343 FORWARD LENGTH=342
          Length = 342

 Score =  511 bits (1316), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 235/317 (74%), Positives = 267/317 (84%), Gaps = 4/317 (1%)

Query: 19  VIDASAGDVDPRYRDCIRQCQETGCVAQSCFPHCKFPSDGEHFDRPWYMQEPLYLQWKKW 78
           + +ASAGD DP YR C+ +C+ +GCV Q CFP C   SDG     PWY+QEPLYLQWKKW
Sbjct: 19  ISNASAGDADPDYRTCVSECEISGCVGQLCFPQCNSSSDGG----PWYIQEPLYLQWKKW 74

Query: 79  DCQNDCRYHCMLDREKERKLLNLVPVKYHGKWPFARIYGMQEAASVAFSALNLAMHFHGW 138
            CQ DCRY CM++RE ER+ L   PVKYHGKWPF R+ G+QE ASVAFS LNLAMHFHGW
Sbjct: 75  GCQGDCRYQCMVNRETERETLGQAPVKYHGKWPFKRVLGIQEPASVAFSVLNLAMHFHGW 134

Query: 139 VSFFILLYYKLPLKDGKEAYYEYAGLWHIYGLLSLNSWFWSAVFHSRDVDLTETLDYSSA 198
           +SFFI++YYKLPLK  + AYYEY GLWHIYGLLS+NSWFWSAVFHSRDVDLTE LDYSSA
Sbjct: 135 LSFFIMIYYKLPLKQDRTAYYEYVGLWHIYGLLSMNSWFWSAVFHSRDVDLTERLDYSSA 194

Query: 199 VILLGYSLILAILRSFNVRDEATRVMVSAPLIAFVITHVMYINFYKLDYGWNMIVCVVMA 258
           V +LG+SLILAILR+F++R EA RVMVSAP++AFV TH++YINFYKLDYGWNMIVCV M 
Sbjct: 195 VAILGFSLILAILRTFDIRVEAARVMVSAPILAFVTTHILYINFYKLDYGWNMIVCVAMG 254

Query: 259 VVQLVIWAVWAGLSGHPSRWKLWLVVIAGGLAMLLEIYDFPPYEGLLDAHALWHATTIPL 318
           V QL +WA WA +S HPS WKLW+VVIAGGLAMLLEIYDFPPYEG  DAH++WHA TIPL
Sbjct: 255 VSQLFLWARWAAVSSHPSNWKLWVVVIAGGLAMLLEIYDFPPYEGYFDAHSIWHAATIPL 314

Query: 319 TYIWWSFIRDDAEFRTS 335
           T +WWSFIRDDAEFRTS
Sbjct: 315 TILWWSFIRDDAEFRTS 331


>AT5G62130.1 | Symbols:  | Per1-like family protein |
           chr5:24950685-24952918 REVERSE LENGTH=343
          Length = 343

 Score =  427 bits (1097), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 187/334 (55%), Positives = 256/334 (76%)

Query: 9   FLLVLSWSVEVIDASAGDVDPRYRDCIRQCQETGCVAQSCFPHCKFPSDGEHFDRPWYMQ 68
            ++V+S  V  ++AS GD D  Y+ C+ QCQ+TGCV  +CF HCKF +DG+  D PWYMQ
Sbjct: 10  LIIVVSCLVSTLEASEGDSDSLYKSCVDQCQKTGCVGDTCFQHCKFSADGKAIDGPWYMQ 69

Query: 69  EPLYLQWKKWDCQNDCRYHCMLDREKERKLLNLVPVKYHGKWPFARIYGMQEAASVAFSA 128
           EPLYL+WK+WDCQ+DC+Y CM+ RE+ERK     P KY GKWP   +YG+QE  SVAFSA
Sbjct: 70  EPLYLRWKQWDCQSDCQYECMMTREEERKRNGERPTKYFGKWPLKHVYGIQEPVSVAFSA 129

Query: 129 LNLAMHFHGWVSFFILLYYKLPLKDGKEAYYEYAGLWHIYGLLSLNSWFWSAVFHSRDVD 188
           L+LAM F GWVS+FIL+YYKLPL+  ++ YYEY G+ HIY ++ +NS FWS++ HSRDV+
Sbjct: 130 LDLAMQFQGWVSYFILVYYKLPLQPNRKTYYEYNGIVHIYAIIVMNSLFWSSICHSRDVE 189

Query: 189 LTETLDYSSAVILLGYSLILAILRSFNVRDEATRVMVSAPLIAFVITHVMYINFYKLDYG 248
           LTE LDYSSA +L G+SLILAILRSF+++D++ ++MV+AP++A V TH++Y+NFY LD G
Sbjct: 190 LTERLDYSSATVLAGFSLILAILRSFSIQDQSVKIMVTAPILAVVATHILYLNFYNLDEG 249

Query: 249 WNMIVCVVMAVVQLVIWAVWAGLSGHPSRWKLWLVVIAGGLAMLLEIYDFPPYEGLLDAH 308
            +  V   +  ++LV+W +WA L+ HPS+WKL   +I+  L + L ++DFPPY+G +DAH
Sbjct: 250 LHWKVIFGIGGIELVVWGLWAALTSHPSKWKLRAFLISSILTLCLRMFDFPPYKGYIDAH 309

Query: 309 ALWHATTIPLTYIWWSFIRDDAEFRTSIRVKKAK 342
           ALW    IPL+Y+WWSF+ DDA FRT++ +KK+K
Sbjct: 310 ALWRGAGIPLSYLWWSFVCDDAVFRTTVNLKKSK 343


>AT5G62130.2 | Symbols:  | Per1-like family protein |
           chr5:24950685-24952426 REVERSE LENGTH=345
          Length = 345

 Score =  412 bits (1059), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 179/311 (57%), Positives = 242/311 (77%)

Query: 32  RDCIRQCQETGCVAQSCFPHCKFPSDGEHFDRPWYMQEPLYLQWKKWDCQNDCRYHCMLD 91
           R C+ QCQ+TGCV  +CF HCKF +DG+  D PWYMQEPLYL+WK+WDCQ+DC+Y CM+ 
Sbjct: 35  RSCVDQCQKTGCVGDTCFQHCKFSADGKAIDGPWYMQEPLYLRWKQWDCQSDCQYECMMT 94

Query: 92  REKERKLLNLVPVKYHGKWPFARIYGMQEAASVAFSALNLAMHFHGWVSFFILLYYKLPL 151
           RE+ERK     P KY GKWP   +YG+QE  SVAFSAL+LAM F GWVS+FIL+YYKLPL
Sbjct: 95  REEERKRNGERPTKYFGKWPLKHVYGIQEPVSVAFSALDLAMQFQGWVSYFILVYYKLPL 154

Query: 152 KDGKEAYYEYAGLWHIYGLLSLNSWFWSAVFHSRDVDLTETLDYSSAVILLGYSLILAIL 211
           +  ++ YYEY G+ HIY ++ +NS FWS++ HSRDV+LTE LDYSSA +L G+SLILAIL
Sbjct: 155 QPNRKTYYEYNGIVHIYAIIVMNSLFWSSICHSRDVELTERLDYSSATVLAGFSLILAIL 214

Query: 212 RSFNVRDEATRVMVSAPLIAFVITHVMYINFYKLDYGWNMIVCVVMAVVQLVIWAVWAGL 271
           RSF+++D++ ++MV+AP++A V TH++Y+NFY LD G +  V   +  ++LV+W +WA L
Sbjct: 215 RSFSIQDQSVKIMVTAPILAVVATHILYLNFYNLDEGLHWKVIFGIGGIELVVWGLWAAL 274

Query: 272 SGHPSRWKLWLVVIAGGLAMLLEIYDFPPYEGLLDAHALWHATTIPLTYIWWSFIRDDAE 331
           + HPS+WKL   +I+  L + L ++DFPPY+G +DAHALW    IPL+Y+WWSF+ DDA 
Sbjct: 275 TSHPSKWKLRAFLISSILTLCLRMFDFPPYKGYIDAHALWRGAGIPLSYLWWSFVCDDAV 334

Query: 332 FRTSIRVKKAK 342
           FRT++ +KK+K
Sbjct: 335 FRTTVNLKKSK 345


>AT1G16560.4 | Symbols:  | Per1-like family protein |
           chr1:5669234-5670343 FORWARD LENGTH=287
          Length = 287

 Score =  367 bits (943), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 173/216 (80%), Positives = 193/216 (89%)

Query: 120 EAASVAFSALNLAMHFHGWVSFFILLYYKLPLKDGKEAYYEYAGLWHIYGLLSLNSWFWS 179
           E ASVAFS LNLAMHFHGW+SFFI++YYKLPLK  + AYYEY GLWHIYGLLS+NSWFWS
Sbjct: 61  EPASVAFSVLNLAMHFHGWLSFFIMIYYKLPLKQDRTAYYEYVGLWHIYGLLSMNSWFWS 120

Query: 180 AVFHSRDVDLTETLDYSSAVILLGYSLILAILRSFNVRDEATRVMVSAPLIAFVITHVMY 239
           AVFHSRDVDLTE LDYSSAV +LG+SLILAILR+F++R EA RVMVSAP++AFV TH++Y
Sbjct: 121 AVFHSRDVDLTERLDYSSAVAILGFSLILAILRTFDIRVEAARVMVSAPILAFVTTHILY 180

Query: 240 INFYKLDYGWNMIVCVVMAVVQLVIWAVWAGLSGHPSRWKLWLVVIAGGLAMLLEIYDFP 299
           INFYKLDYGWNMIVCV M V QL +WA WA +S HPS WKLW+VVIAGGLAMLLEIYDFP
Sbjct: 181 INFYKLDYGWNMIVCVAMGVSQLFLWARWAAVSSHPSNWKLWVVVIAGGLAMLLEIYDFP 240

Query: 300 PYEGLLDAHALWHATTIPLTYIWWSFIRDDAEFRTS 335
           PYEG  DAH++WHA TIPLT +WWSFIRDDAEFRTS
Sbjct: 241 PYEGYFDAHSIWHAATIPLTILWWSFIRDDAEFRTS 276