Miyakogusa Predicted Gene

Lj3g3v0392790.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0392790.1 Non Chatacterized Hit- tr|I1MIA5|I1MIA5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.35449
PE,82.89,0,Adenine_glyco,Methyladenine glycosylase; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; no descrip,CUFF.40608.1
         (370 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G12710.1 | Symbols:  | DNA glycosylase superfamily protein | ...   355   3e-98
AT5G44680.1 | Symbols:  | DNA glycosylase superfamily protein | ...   326   1e-89
AT5G57970.2 | Symbols:  | DNA glycosylase superfamily protein | ...   219   2e-57
AT5G57970.1 | Symbols:  | DNA glycosylase superfamily protein | ...   219   2e-57
AT1G80850.1 | Symbols:  | DNA glycosylase superfamily protein | ...   219   3e-57
AT1G75090.1 | Symbols:  | DNA glycosylase superfamily protein | ...   218   4e-57
AT1G13635.2 | Symbols:  | DNA glycosylase superfamily protein | ...   214   1e-55
AT1G13635.1 | Symbols:  | DNA glycosylase superfamily protein | ...   214   1e-55
AT1G15970.1 | Symbols:  | DNA glycosylase superfamily protein | ...   211   1e-54

>AT3G12710.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr3:4040572-4041828 REVERSE LENGTH=312
          Length = 312

 Score =  355 bits (911), Expect = 3e-98,   Method: Compositional matrix adjust.
 Identities = 177/264 (67%), Positives = 204/264 (77%), Gaps = 17/264 (6%)

Query: 110 TLERKKSKSFKDTXXXXXXXXXXXXXXNLITDAPGSIAAVRREHMALQHAQRKMKISHYG 169
           +LERKKSKSFK+                LIT+APGSIAAVRRE +A Q A RK+KI+HYG
Sbjct: 46  SLERKKSKSFKEGDSYSSW---------LITEAPGSIAAVRREQVAAQQALRKLKIAHYG 96

Query: 170 RSKSA-NF--ERVVPLDSSINLTSKTIEEEKRCSFITANSDPIYVAYHDEQWGVPVHDDK 226
           RSKS  NF   +VVPL     L        +RCSF+T  SDPIYVAYHDE+WGVPVHDDK
Sbjct: 97  RSKSTINFTSSKVVPL-----LNPNPNPHPQRCSFLTPTSDPIYVAYHDEEWGVPVHDDK 151

Query: 227 MLFELLVLSGAQVGSDWTSILKKRQDFRTAFSEFDAATVANFTDKQMVSISLEYGIDISR 286
            LFELL LSGAQVGSDWTS L+KR D+R AF EF+A  VA  T+K+M +IS+EY I++S+
Sbjct: 152 TLFELLTLSGAQVGSDWTSTLRKRHDYRKAFMEFEAEVVAKLTEKEMNAISIEYKIEMSK 211

Query: 287 VRGVVDNANQILEIIKNFGSFDKYIWGFVNHKPISTQYKFSHKIPVKTSKSESISKDMIR 346
           VRGVV+NA +I+EI K F S +KY+WGFVNHKPIST YK  HKIPVKTSKSESISKDM+R
Sbjct: 212 VRGVVENAKKIVEIKKAFVSLEKYLWGFVNHKPISTNYKLGHKIPVKTSKSESISKDMVR 271

Query: 347 RGFRFVGPTVLHSFMQAAGLTNDH 370
           RGFRFVGPTV+HSFMQAAGLTNDH
Sbjct: 272 RGFRFVGPTVVHSFMQAAGLTNDH 295


>AT5G44680.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr5:18024461-18025893 REVERSE LENGTH=353
          Length = 353

 Score =  326 bits (836), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 178/373 (47%), Positives = 231/373 (61%), Gaps = 39/373 (10%)

Query: 1   MCSTKAKVTVGQEATTTIPWARINGRPVLQPTCNRVPNLVEGRNXXXXXXXXXXXXXXXX 60
           MCS+K K  + QE  +     +INGRPVLQP  N+VP L + RN                
Sbjct: 1   MCSSKLK-NLTQENIS-----QINGRPVLQPKSNQVPTL-DRRNSLKKSPPKPLNPIASK 53

Query: 61  XXXXXXXXXXXXXXXXXXXXXAVKRGNESNVLNSSSEK---IATPKNSTRTPTLERKKSK 117
                                    G+   +L SSS K   + +P+NS            
Sbjct: 54  IPSPRPISLISPPLSPNTKSLRKPAGSCKELLRSSSTKSKPVISPENS----------DG 103

Query: 118 SFKDTXXXXXXXXXXXXXXNLITDAPGSIAAVRREHMALQHAQRKMKISHYGRSKSANFE 177
            +K+                ++   PGSIAA RRE +A++  +RK KISHYGR KS    
Sbjct: 104 GYKEVMPMV-----------IVQKQPGSIAAARREEVAMKQEERKKKISHYGRIKSVKSN 152

Query: 178 RVVPLDSSINLTSKTIEEEKRCSFITANSDPIYVAYHDEQWGVPVHDDKMLFELLVLSGA 237
                + ++N+     E++KRCSFIT +SDPIYVAYHD++WGVPVHDD +LFELLVL+GA
Sbjct: 153 -----EKNLNVEH---EKKKRCSFITTSSDPIYVAYHDKEWGVPVHDDNLLFELLVLTGA 204

Query: 238 QVGSDWTSILKKRQDFRTAFSEFDAATVANFTDKQMVSISLEYGIDISRVRGVVDNANQI 297
           QVGSDWTS+LK+R  FR AFS F+A  VA+F +K++ SI  +YGI++S+V  VVDNA QI
Sbjct: 205 QVGSDWTSVLKRRNTFREAFSGFEAELVADFNEKKIQSIVNDYGINLSQVLAVVDNAKQI 264

Query: 298 LEIIKNFGSFDKYIWGFVNHKPISTQYKFSHKIPVKTSKSESISKDMIRRGFRFVGPTVL 357
           L++ ++ GSF+KYIWGF+ HKP++T+Y    KIPVKTSKSE+ISKDM+RRGFRFVGPTV+
Sbjct: 265 LKVKRDLGSFNKYIWGFMKHKPVTTKYTSCQKIPVKTSKSETISKDMVRRGFRFVGPTVI 324

Query: 358 HSFMQAAGLTNDH 370
           HS MQAAGLTNDH
Sbjct: 325 HSLMQAAGLTNDH 337


>AT5G57970.2 | Symbols:  | DNA glycosylase superfamily protein |
           chr5:23467316-23468910 FORWARD LENGTH=347
          Length = 347

 Score =  219 bits (559), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 95/179 (53%), Positives = 133/179 (74%), Gaps = 2/179 (1%)

Query: 194 EEEKRCSFITANSDPIYVAYHDEQWGVPVHDDKMLFELLVLSGAQVGSDWTSILKKRQDF 253
           E +KRC+++T NSDP Y+ +HDE+WGVPVHDDK LFELLVLSGA     W +IL KRQ F
Sbjct: 151 ETKKRCTWVTPNSDPCYIVFHDEEWGVPVHDDKRLFELLVLSGALAEHTWPTILSKRQAF 210

Query: 254 RTAFSEFDAATVANFTDKQMVSISLEYGIDIS--RVRGVVDNANQILEIIKNFGSFDKYI 311
           R  F++FD   +    +K+++         +S  ++R V++NA QIL++I+ +GSFDKYI
Sbjct: 211 REVFADFDPNAIVKINEKKIIGPGSPASTLLSDLKLRAVIENARQILKVIEEYGSFDKYI 270

Query: 312 WGFVNHKPISTQYKFSHKIPVKTSKSESISKDMIRRGFRFVGPTVLHSFMQAAGLTNDH 370
           W FV +K I +++++  ++P KT K+E ISKD++RRGFR VGPTV++SFMQAAG+TNDH
Sbjct: 271 WSFVKNKAIVSKFRYQRQVPAKTPKAEVISKDLVRRGFRSVGPTVVYSFMQAAGITNDH 329


>AT5G57970.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr5:23467316-23468910 FORWARD LENGTH=347
          Length = 347

 Score =  219 bits (559), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 95/179 (53%), Positives = 133/179 (74%), Gaps = 2/179 (1%)

Query: 194 EEEKRCSFITANSDPIYVAYHDEQWGVPVHDDKMLFELLVLSGAQVGSDWTSILKKRQDF 253
           E +KRC+++T NSDP Y+ +HDE+WGVPVHDDK LFELLVLSGA     W +IL KRQ F
Sbjct: 151 ETKKRCTWVTPNSDPCYIVFHDEEWGVPVHDDKRLFELLVLSGALAEHTWPTILSKRQAF 210

Query: 254 RTAFSEFDAATVANFTDKQMVSISLEYGIDIS--RVRGVVDNANQILEIIKNFGSFDKYI 311
           R  F++FD   +    +K+++         +S  ++R V++NA QIL++I+ +GSFDKYI
Sbjct: 211 REVFADFDPNAIVKINEKKIIGPGSPASTLLSDLKLRAVIENARQILKVIEEYGSFDKYI 270

Query: 312 WGFVNHKPISTQYKFSHKIPVKTSKSESISKDMIRRGFRFVGPTVLHSFMQAAGLTNDH 370
           W FV +K I +++++  ++P KT K+E ISKD++RRGFR VGPTV++SFMQAAG+TNDH
Sbjct: 271 WSFVKNKAIVSKFRYQRQVPAKTPKAEVISKDLVRRGFRSVGPTVVYSFMQAAGITNDH 329


>AT1G80850.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr1:30385607-30387272 REVERSE LENGTH=327
          Length = 327

 Score =  219 bits (557), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 98/176 (55%), Positives = 129/176 (73%), Gaps = 2/176 (1%)

Query: 197 KRCSFITANSDPIYVAYHDEQWGVPVHDDKMLFELLVLSGAQVGSDWTSILKKRQDFRTA 256
           KRC++IT  SD  Y+A+HDE+WGVPVHDDK LFELL LSGA     W  IL KRQ FR  
Sbjct: 134 KRCAWITPKSDQCYIAFHDEEWGVPVHDDKRLFELLSLSGALAELSWKDILSKRQLFREV 193

Query: 257 FSEFDAATVANFTDKQMVSISLEYGIDIS--RVRGVVDNANQILEIIKNFGSFDKYIWGF 314
           F +FD   ++  T+K++ S  +     +S  ++R +++NANQ+ +II  FGSFDKYIW F
Sbjct: 194 FMDFDPIAISELTNKKITSPEIAATTLLSEQKLRSILENANQVCKIIGAFGSFDKYIWNF 253

Query: 315 VNHKPISTQYKFSHKIPVKTSKSESISKDMIRRGFRFVGPTVLHSFMQAAGLTNDH 370
           VN KP  +Q+++  ++PVKTSK+E ISKD++RRGFR V PTV++SFMQ AGLTNDH
Sbjct: 254 VNQKPTQSQFRYPRQVPVKTSKAELISKDLVRRGFRSVSPTVIYSFMQTAGLTNDH 309


>AT1G75090.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr1:28187647-28189612 REVERSE LENGTH=329
          Length = 329

 Score =  218 bits (556), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 94/176 (53%), Positives = 131/176 (74%), Gaps = 2/176 (1%)

Query: 197 KRCSFITANSDPIYVAYHDEQWGVPVHDDKMLFELLVLSGAQVGSDWTSILKKRQDFRTA 256
           KRC +IT NSDPIYV +HDE+WGVPV DDK LFELLV S A     W SIL++R DFR  
Sbjct: 119 KRCHWITPNSDPIYVLFHDEEWGVPVRDDKKLFELLVFSQALAEFSWPSILRRRDDFRKL 178

Query: 257 FSEFDAATVANFTDKQMVSISLEYGIDIS--RVRGVVDNANQILEIIKNFGSFDKYIWGF 314
           F EFD + +A FT+K+++S+ +   + +S  ++R +V+NA  +L++ + FGSF  Y W F
Sbjct: 179 FEEFDPSAIAQFTEKRLMSLRVNGCLILSEQKLRAIVENAKSVLKVKQEFGSFSNYCWRF 238

Query: 315 VNHKPISTQYKFSHKIPVKTSKSESISKDMIRRGFRFVGPTVLHSFMQAAGLTNDH 370
           VNHKP+   Y++  ++PVK+ K+E ISKDM++RGFR VGPTV++SF+QA+G+ NDH
Sbjct: 239 VNHKPLRNGYRYGRQVPVKSPKAEYISKDMMQRGFRCVGPTVMYSFLQASGIVNDH 294


>AT1G13635.2 | Symbols:  | DNA glycosylase superfamily protein |
           chr1:4674248-4675784 FORWARD LENGTH=311
          Length = 311

 Score =  214 bits (544), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 93/179 (51%), Positives = 132/179 (73%), Gaps = 2/179 (1%)

Query: 194 EEEKRCSFITANSDPIYVAYHDEQWGVPVHDDKMLFELLVLSGAQVGSDWTSILKKRQDF 253
           +E KRC++IT  SD +YV +HD+QWGVPV+DD +LFE L +SG  +  +WT ILK+++ F
Sbjct: 112 DEPKRCNWITKKSDEVYVMFHDQQWGVPVYDDNLLFEFLAMSGMLMDYNWTEILKRKEHF 171

Query: 254 RTAFSEFDAATVANFTDKQMVSISLEYGIDI--SRVRGVVDNANQILEIIKNFGSFDKYI 311
           R AF EFD   VA   +K++  I+    I +  SRVR +VDNA  I +++  FGSF  ++
Sbjct: 172 REAFCEFDPNRVAKMGEKEIAEIASNKAIMLQESRVRCIVDNAKCITKVVNEFGSFSSFV 231

Query: 312 WGFVNHKPISTQYKFSHKIPVKTSKSESISKDMIRRGFRFVGPTVLHSFMQAAGLTNDH 370
           WGF+++KPI  ++K+S  +P+++ K+E ISKDMI+RGFRFVGP ++HSFMQAAGLT DH
Sbjct: 232 WGFMDYKPIINKFKYSRNVPLRSPKAEIISKDMIKRGFRFVGPVIVHSFMQAAGLTIDH 290


>AT1G13635.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr1:4674248-4675784 FORWARD LENGTH=311
          Length = 311

 Score =  214 bits (544), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 93/179 (51%), Positives = 132/179 (73%), Gaps = 2/179 (1%)

Query: 194 EEEKRCSFITANSDPIYVAYHDEQWGVPVHDDKMLFELLVLSGAQVGSDWTSILKKRQDF 253
           +E KRC++IT  SD +YV +HD+QWGVPV+DD +LFE L +SG  +  +WT ILK+++ F
Sbjct: 112 DEPKRCNWITKKSDEVYVMFHDQQWGVPVYDDNLLFEFLAMSGMLMDYNWTEILKRKEHF 171

Query: 254 RTAFSEFDAATVANFTDKQMVSISLEYGIDI--SRVRGVVDNANQILEIIKNFGSFDKYI 311
           R AF EFD   VA   +K++  I+    I +  SRVR +VDNA  I +++  FGSF  ++
Sbjct: 172 REAFCEFDPNRVAKMGEKEIAEIASNKAIMLQESRVRCIVDNAKCITKVVNEFGSFSSFV 231

Query: 312 WGFVNHKPISTQYKFSHKIPVKTSKSESISKDMIRRGFRFVGPTVLHSFMQAAGLTNDH 370
           WGF+++KPI  ++K+S  +P+++ K+E ISKDMI+RGFRFVGP ++HSFMQAAGLT DH
Sbjct: 232 WGFMDYKPIINKFKYSRNVPLRSPKAEIISKDMIKRGFRFVGPVIVHSFMQAAGLTIDH 290


>AT1G15970.1 | Symbols:  | DNA glycosylase superfamily protein |
           chr1:5486544-5488494 REVERSE LENGTH=352
          Length = 352

 Score =  211 bits (536), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 95/179 (53%), Positives = 126/179 (70%), Gaps = 8/179 (4%)

Query: 197 KRCSFITANSDPIYVAYHDEQWGVPVHDDKMLFELLVLSGAQVGSDWTSILKKRQDFRTA 256
           KRC++IT  +DP YVA+HDE+WGVPVHDDK LFELL LSGA     WT IL +R   R  
Sbjct: 145 KRCAWITPKADPCYVAFHDEEWGVPVHDDKKLFELLCLSGALAELSWTDILSRRHILREV 204

Query: 257 FSEFDAATVANFTDKQM-----VSISLEYGIDISRVRGVVDNANQILEIIKNFGSFDKYI 311
           F +FD   VA   DK++      +ISL   +   ++R ++DN+  + +II   GS  KY+
Sbjct: 205 FMDFDPVAVAELNDKKLTAPGTAAISLLSEV---KIRSILDNSRHVRKIIAECGSLKKYM 261

Query: 312 WGFVNHKPISTQYKFSHKIPVKTSKSESISKDMIRRGFRFVGPTVLHSFMQAAGLTNDH 370
           W FVN+KP  +Q+++  ++PVKTSK+E ISKD++RRGFR V PTV++SFMQAAGLTNDH
Sbjct: 262 WNFVNNKPTQSQFRYQRQVPVKTSKAEFISKDLVRRGFRSVSPTVIYSFMQAAGLTNDH 320