Miyakogusa Predicted Gene

Lj3g3v0382760.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0382760.1 Non Chatacterized Hit- tr|F6H9S6|F6H9S6_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,84.34,0,FYVE/PHD zinc finger,Zinc finger, FYVE/PHD-type; P-loop
containing nucleoside triphosphate hydrolase,CUFF.40602.1
         (582 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79350.1 | Symbols: EMB1135 | RING/FYVE/PHD zinc finger super...   989   0.0  

>AT1G79350.1 | Symbols: EMB1135 | RING/FYVE/PHD zinc finger
            superfamily protein | chr1:29844829-29853215 REVERSE
            LENGTH=1295
          Length = 1295

 Score =  989 bits (2556), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 465/585 (79%), Positives = 538/585 (91%), Gaps = 4/585 (0%)

Query: 1    MLQCSCCGKLVHSSCLMPPIGDIVPEEWSCHLCKEKTDEYLLARQAYIAELQKRYDAALE 60
            +L CS C KL H  C++PP+ D+  E W C  CKEKT+EY+ AR+ YIAELQKRY+AALE
Sbjct: 706  LLHCSECDKLFHPDCVVPPVIDLPSEAWICFSCKEKTEEYIQARRLYIAELQKRYEAALE 765

Query: 61   RRTKILEIIRSLDLPNNPLDDIIDQLGGPDKVAEITGRRGMLVRASTGKGVTYQARNTKD 120
            R++KI+EIIRSL+LPNNPLDDI+DQLGGP+KVAE+TGRRGMLVRAS GKGVTYQARNTKD
Sbjct: 766  RKSKIIEIIRSLNLPNNPLDDIVDQLGGPEKVAEMTGRRGMLVRASNGKGVTYQARNTKD 825

Query: 121  VTMEMVNMHEKQLFMDGKKLVAIISEAGSAGVSLQADRRAGNQKRRVHLTLELPWSADRA 180
            +TMEMVNMHEKQLFMDGKKLVAIISEAGSAGVSLQADRRA NQKRRVHLTLELPWSADRA
Sbjct: 826  ITMEMVNMHEKQLFMDGKKLVAIISEAGSAGVSLQADRRAVNQKRRVHLTLELPWSADRA 885

Query: 181  IQQFGRTHRSNQASAPEYRILFTNLGGERRFASIVAKRLESLGALTQGDRRAGPS---LS 237
            IQQFGRTHRSNQ SAPEYR+LFTNLGGERRFASIVAKRLE+LGALTQGDRRAGPS   LS
Sbjct: 886  IQQFGRTHRSNQTSAPEYRLLFTNLGGERRFASIVAKRLETLGALTQGDRRAGPSGPSLS 945

Query: 238  AYNYDSAYGKRALVIMYKGIMEQDSLPVVPPGCSSDRPDTIKDFIAQAKAALVSVGIVRD 297
            AYNYDS +GK++L++MY+GIMEQ+ LPV+PPGCS D P+T+K+F+ +A+AALV+VGIVRD
Sbjct: 946  AYNYDSNFGKKSLMVMYRGIMEQEKLPVLPPGCSIDEPETVKEFLTKARAALVAVGIVRD 1005

Query: 298  TILGNNGKDLGRLSGRIIDSDMHEVGRFLNRLLGLPPDIQNGLFELFVSILDLLIRNARI 357
            ++L N GKD+GR SGRIIDSDMH+VGRFLNRLLGLPPDIQN LFELF SILD+L+ NARI
Sbjct: 1006 SVLAN-GKDVGRFSGRIIDSDMHDVGRFLNRLLGLPPDIQNRLFELFTSILDVLVHNARI 1064

Query: 358  EGNLDTGIVDLKANVIELQGTPKTVHVDQMTGASTVLFTFILDRGITWELASNMLNEKQK 417
            EG+ D+GIVD+KAN +EL  TPKTVHVDQM+GAST+LFTF LDRG+TWE AS+ML  K++
Sbjct: 1065 EGSFDSGIVDMKANSVELLSTPKTVHVDQMSGASTMLFTFTLDRGVTWESASSMLEGKRR 1124

Query: 418  DGLGSAHDGFYESKREWLGKRHFILAFESSASGMYKIVRPPVGESNREMPLSELKSKYRK 477
            DGLGSA+DGF+ESKREWLG+RHFILAFES+ASG++KIVRP VGES REM LSELK+KYRK
Sbjct: 1125 DGLGSANDGFFESKREWLGRRHFILAFESAASGLFKIVRPAVGESIREMSLSELKTKYRK 1184

Query: 478  ISSLEKAQTGWEEEYEVSSKQCMHGPKCKIGDFCTVGRRLQEVNVLGGLILPVWGTIEKA 537
            +SSLEKA+TGWE+EYEVSSKQCMHGPKCK+G++CTVGRR+QEVNV+GGLILP+WGTIEKA
Sbjct: 1185 LSSLEKARTGWEDEYEVSSKQCMHGPKCKLGEYCTVGRRIQEVNVVGGLILPIWGTIEKA 1244

Query: 538  LAKQARLSHRRLRVVRIETTVDNQRIVGLLVPNSAVETVLEGLAW 582
            L+KQAR SH+R+RV+RIETT DNQRIVGL +PN+AVETVL+ LAW
Sbjct: 1245 LSKQARHSHKRIRVIRIETTTDNQRIVGLSIPNAAVETVLQDLAW 1289