Miyakogusa Predicted Gene
- Lj3g3v0381680.5
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0381680.5 Non Chatacterized Hit- tr|B9SD26|B9SD26_RICCO
Pentatricopeptide repeat-containing protein, putative
,31.31,2e-18,PPR_2,Pentatricopeptide repeat; PPR_1,Pentatricopeptide
repeat; PPR,Pentatricopeptide repeat; seg,NU,CUFF.40623.5
(645 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 6e-53
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 200 2e-51
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 195 8e-50
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 4e-49
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 192 6e-49
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 189 5e-48
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 188 1e-47
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 3e-47
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 3e-47
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 5e-47
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 186 5e-47
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 2e-46
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 5e-46
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 1e-45
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 177 2e-44
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 177 2e-44
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 176 3e-44
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 176 6e-44
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 175 8e-44
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 1e-42
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 170 2e-42
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 170 3e-42
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 7e-42
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 4e-41
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 2e-40
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 163 4e-40
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 162 5e-40
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 8e-40
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 9e-40
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 1e-39
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 161 1e-39
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 3e-39
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 159 4e-39
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 159 5e-39
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 2e-38
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 157 2e-38
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 157 2e-38
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 156 4e-38
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 6e-38
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 155 9e-38
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 5e-37
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 5e-37
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 5e-37
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 5e-37
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 151 1e-36
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 2e-36
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 2e-36
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 150 2e-36
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 148 1e-35
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 148 1e-35
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 6e-35
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 8e-35
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 1e-34
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 1e-34
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 145 1e-34
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 1e-34
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 143 3e-34
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 143 4e-34
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 7e-34
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 7e-34
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 9e-34
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 142 9e-34
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 2e-33
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 140 3e-33
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 4e-33
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 139 4e-33
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 139 8e-33
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 6e-32
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 135 8e-32
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 133 3e-31
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 133 5e-31
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 6e-31
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 132 8e-31
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 132 1e-30
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 126 4e-29
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 5e-29
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 8e-29
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 125 1e-28
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 124 1e-28
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 2e-28
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 124 2e-28
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 123 4e-28
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 4e-28
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 4e-28
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 8e-28
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 9e-28
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 121 1e-27
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 2e-27
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 5e-27
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 7e-27
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 8e-27
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 117 2e-26
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 115 1e-25
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 3e-25
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 9e-25
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 112 1e-24
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 2e-24
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 5e-24
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 5e-24
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 7e-24
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 8e-24
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 1e-23
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 6e-23
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 105 7e-23
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 7e-23
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 7e-23
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 2e-22
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 5e-22
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 5e-22
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 9e-22
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 1e-21
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 101 2e-21
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 100 3e-21
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 6e-21
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 9e-20
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 96 1e-19
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 5e-19
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 9e-19
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 92 1e-18
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 88 2e-17
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 87 5e-17
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 84 2e-16
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 84 2e-16
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 84 3e-16
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 83 5e-16
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 6e-16
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 2e-15
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 2e-15
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 81 2e-15
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 3e-15
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 3e-15
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 5e-15
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 80 6e-15
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 79 9e-15
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 79 1e-14
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 77 5e-14
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 8e-14
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 3e-13
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 73 7e-13
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 2e-12
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 71 2e-12
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 71 2e-12
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 71 3e-12
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 70 4e-12
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 4e-12
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 70 7e-12
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 9e-12
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 69 1e-11
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-11
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 68 2e-11
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 67 3e-11
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 67 6e-11
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 66 6e-11
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 8e-11
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 65 1e-10
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 65 2e-10
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 2e-10
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 2e-10
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 64 3e-10
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 64 3e-10
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 64 4e-10
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 5e-10
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 63 5e-10
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 7e-10
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 8e-10
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 62 1e-09
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 62 2e-09
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 2e-09
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 3e-09
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 60 6e-09
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 6e-09
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 1e-08
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 2e-08
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 58 2e-08
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 3e-08
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 58 3e-08
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 5e-08
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 8e-08
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 55 1e-07
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 55 1e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 55 1e-07
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 55 2e-07
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 54 2e-07
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 54 2e-07
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 4e-07
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 54 4e-07
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 6e-07
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 8e-07
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 52 9e-07
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 52 1e-06
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 52 2e-06
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 51 2e-06
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 50 3e-06
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 206 bits (523), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 131/463 (28%), Positives = 224/463 (48%), Gaps = 44/463 (9%)
Query: 206 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
N++TY+I+++C + LA +L K+ + G P +VT + + G C + A LV
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
++ + +S FN +IHG + +EA+ +++ M PD+ +Y +++N CK+
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 322 GDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 381
GD+ +I+P +V Y ++I + L + + +L ++ M IRPN
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTII----DALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 382 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMP 441
+ N ++R C G++ +A LL D E+ IN N +++ +I KE A +L
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 442 RMLKRNV-----------------------------------LPGVVNYSTLISGFAKEQ 466
M+KR++ P VV Y+TLI GF K +
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 410
Query: 467 SNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSY 526
E +E LF + + G+ NT TYTTLI + R+ A F +M+ + PD ++Y
Sbjct: 411 RVDEGME-LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 527 TALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 586
+ L+ CN ++ A +F+ + R P++YTY +I+G CK ++ LF +
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529
Query: 587 KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDG 629
KG+ P+VVTYT +++ + + G E + LF EMK L D G
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSG 572
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 148/554 (26%), Positives = 257/554 (46%), Gaps = 52/554 (9%)
Query: 73 KFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDD----SFEQFST 128
KF +W H F ++ I +H ++ L D+ D+ F+
Sbjct: 67 KFLNWANPHQF-FTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQE 125
Query: 129 LLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKC-LXXXXX 187
DL + + VF++++K ++ S+++ A + A+ G + S N +L +
Sbjct: 126 TYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRN 185
Query: 188 XXXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGT 243
++E+ PN+ TY I++ G+I +A + K+ G P VVTY T
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT 245
Query: 244 YIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSR 303
I G C+ +D KL+R + K N +N VI+G C+ G + E VL EM
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 304 TFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQL 362
D +YN L+ +CK+G+ + PS++ YTSLI +CK G
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCK---AGNM- 361
Query: 363 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 422
++++E + M + PN ++ ++G EA +L + ++ G + + +YN
Sbjct: 362 -NRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNA 420
Query: 423 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKA 482
+I+ C + A+ ++ M ++ + P VV+YST++SGF + ++++ E L
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCR---SYDVDEAL------- 470
Query: 483 GITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVA 542
R ++ EM++ + PD ++Y++LI FC R A
Sbjct: 471 -----------------RVKR---------EMVEKGIKPDTITYSSLIQGFCEQRRTKEA 504
Query: 543 CALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAW 602
C L++EM R+G P+ +TYT LI+ +C ++ A QL +EM KG+ PDVVTY+VLI
Sbjct: 505 CDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLING 564
Query: 603 YHKHGRIGEKNKLF 616
+K R E +L
Sbjct: 565 LNKQSRTREAKRLL 578
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 140/560 (25%), Positives = 247/560 (44%), Gaps = 47/560 (8%)
Query: 71 EKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLL 130
E F +E+ S +V + I+I F AG +++V L F++ T
Sbjct: 190 ENVFKEMLESQ-VSPNVFTYNILIRGFCFAG-NIDVALTL------------FDKMETKG 235
Query: 131 DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXX 190
LP+ V+ +N LI + ++ ++ S GLE ++ S N ++ L
Sbjct: 236 CLPN--VVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE 293
Query: 191 XXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIR 246
+ G + TY ++ G+ A + ++ R G P+V+TY + I
Sbjct: 294 VSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIH 353
Query: 247 GLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFP 306
+C+ G ++ A + + ++ + N + ++ GF Q+G +NEA VL EM + P
Sbjct: 354 SMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP 413
Query: 307 DVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDK 365
V +YN L+N C G + + P +V+Y++++ C++ D+
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRS-----YDVDE 468
Query: 366 SLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIH 425
+L V M++ I+P+TI + +++ C + + +EA L E+ G+ ++++Y +I+
Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALIN 528
Query: 426 MICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGIT 485
C E + AL+L M+++ VLP VV YS LI+G K QS +RL +L
Sbjct: 529 AYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK-QSRTREAKRLLLKLFYEESV 587
Query: 486 FNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACAL 545
+ TY TL I++C + S +LI FC M A +
Sbjct: 588 PSDVTYHTL--------------------IENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627
Query: 546 FQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHK 605
F+ M P+ Y +I G C+ I A L+ EM + G VT L+ HK
Sbjct: 628 FESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHK 687
Query: 606 HGRIGEKNKLFGEMKANCIL 625
G++ E N + + +C L
Sbjct: 688 EGKVNELNSVIVHVLRSCEL 707
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/372 (24%), Positives = 161/372 (43%), Gaps = 49/372 (13%)
Query: 273 SHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXX 332
S F+ V+ + + +++AL ++ ++ P V SYN +L+A
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDA--------------- 178
Query: 333 XXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVH 392
++ ++ + V+ ML++ + PN N ++R
Sbjct: 179 -----------------------TIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGF 215
Query: 393 CREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGV 452
C G ALTL + +G N +YN +I CK +L+ M + + P +
Sbjct: 216 CFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNL 275
Query: 453 VNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFG 512
++Y+ +I+G +E + V + T + + G + + TY TLI + + H+A
Sbjct: 276 ISYNVVINGLCRE-GRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHA 334
Query: 513 EMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 572
EM++ L P ++YT+LI C MN A +M G PN TYT L+DGF +
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 573 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKK 632
Y++ A ++ EM G P VVTY LI + + G+M+ +L+D +K
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHC----------VTGKMEDAIAVLEDMKEK 444
Query: 633 LQDPKLVQFKNV 644
P +V + V
Sbjct: 445 GLSPDVVSYSTV 456
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 195 bits (496), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 126/426 (29%), Positives = 215/426 (50%), Gaps = 10/426 (2%)
Query: 198 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++E PNI+TY M++ G++ A + + KI +G +P TY + I G C+
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
+D A K+ ++ K N + +IHG C ++EA+++ +MK FP V +Y +
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
L+ + C IKP+I YT LI + L Q ++K+ E+ M
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI----DSLCSQCKFEKARELLGQM 384
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
L+ + PN I N ++ +C+ G +A+ ++E + ++ N +YNE+I CK +
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH 444
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTT 493
K A+ ++ +ML+R VLP VV Y++LI G + NF+ RL + + G+ + TYT+
Sbjct: 445 K-AMGVLNKMLERKVLPDVVTYNSLIDGQCR-SGNFDSAYRLLSLMNDRGLVPDQWTYTS 502
Query: 494 LISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIG 553
+I ++++ +A F + Q + P+ V YTALI +C +++ A + ++M
Sbjct: 503 MIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKN 562
Query: 554 CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKN 613
CLPN T+ LI G C + AT L ++M + G+ P V T T+LI K G
Sbjct: 563 CLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAY 622
Query: 614 KLFGEM 619
F +M
Sbjct: 623 SRFQQM 628
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 136/550 (24%), Positives = 250/550 (45%), Gaps = 34/550 (6%)
Query: 100 AGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLP----HHSVLVFNVLIKVFASNSMLEH 155
AG+ + F I+GYC+ D F ++P + + + LI ++
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDE 306
Query: 156 AHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS 215
A +FV K+ +R+ L+K L + ETG PNIHTYT+++
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Query: 216 --CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPL 271
C + A E+LG++ G P V+TY I G C+ G ++ A +V + +
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426
Query: 272 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 331
N+ +N +I G+C + V++A+ VL +M + PDV +YN L++ C+ G+
Sbjct: 427 NTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 332 XXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 390
+ P YTS+I LCK+K +++ ++++S+ Q + PN ++ ++
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSK-----RVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 391 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 450
+C+ G+ EA +LE + N ++N +IH +C + K A L +M+K + P
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 451 GVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCR 510
V + LI K+ +F+ F +++ +G + TYTT I + R + A
Sbjct: 601 TVSTDTILIHRLLKD-GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDM 659
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
+M ++ + PD +Y++LI + ++ + N A + + M GC P+ +T+ LI +
Sbjct: 660 MAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLE 719
Query: 571 IDY------------------IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 612
+ Y D +L ++M + P+ +Y LI + G +
Sbjct: 720 MKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA 779
Query: 613 NKLFGEMKAN 622
K+F M+ N
Sbjct: 780 EKVFDHMQRN 789
Score = 165 bits (418), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 192/385 (49%), Gaps = 40/385 (10%)
Query: 275 CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 334
C+N +++ + G V+E +V EM + P++Y+YN ++N +CK G+V
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244
Query: 335 XXCQIKPSIVNYTSLIL-LCKNK-------------LKG-----------------QQLY 363
+ P YTSLI+ C+ K LKG +
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304
Query: 364 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 423
D++++++ M + P +++ C + EAL L+++ E GI N ++Y +
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 424 IHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKE---QSNFEMVERLFTRLV 480
I +C + + A EL+ +ML++ ++P V+ Y+ LI+G+ K + ++VE + +R
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR-- 422
Query: 481 KAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMN 540
++ NT+TY LI + ++ HKA +M++ + PD V+Y +LI C +
Sbjct: 423 --KLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFD 479
Query: 541 VACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
A L M+ G +P+ +TYT +ID CK ++ A LFD +++KG+ P+VV YT LI
Sbjct: 480 SAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALI 539
Query: 601 AWYHKHGRIGEKNKLFGEM-KANCI 624
Y K G++ E + + +M NC+
Sbjct: 540 DGYCKAGKVDEAHLMLEKMLSKNCL 564
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 125/554 (22%), Positives = 236/554 (42%), Gaps = 41/554 (7%)
Query: 94 IHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLD---LPHHSVLVFNVLIKVFASN 150
IHT+ + L+ + CK + + E +L+ +P+ V+ +N LI +
Sbjct: 358 IHTYTV---------LIDSLCSQCKFEKARELLGQMLEKGLMPN--VITYNALINGYCKR 406
Query: 151 SMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTY 210
M+E A V ++ L + R+ N L+K ++E LP++ TY
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKG-YCKSNVHKAMGVLNKMLERKVLPDVVTY 465
Query: 211 TIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHC 266
++ G+ A +L + G P TY + I LC+ V+ A L L
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 267 KLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXX 326
K N + A+I G+C+ G V+EA +LE+M S P+ ++N L++ C G +
Sbjct: 526 KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Query: 327 XXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICN 386
++P++ T LI ++L +D + + ML + +P+
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILI----HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 387 HILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKR 446
++ +CREG+ +A ++ E G++ + ++Y+ +I A +++ RM
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701
Query: 447 NVLPGVVNYSTLIS-----GFAKEQSN------------FEMVERLFTRLVKAGITFNTK 489
P + +LI + K++ + F+ V L ++V+ +T N K
Sbjct: 702 GCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAK 761
Query: 490 TYTTLISIHGRTRKRHKAYCRFGEMIQS-CLCPDEVSYTALIAVFCNIREMNVACALFQE 548
+Y LI A F M ++ + P E+ + AL++ C +++ N A + +
Sbjct: 762 SYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDD 821
Query: 549 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 608
M +G LP L + LI G K + T +F + + G + D + + ++I K G
Sbjct: 822 MICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGL 881
Query: 609 IGEKNKLFGEMKAN 622
+ +LF M+ N
Sbjct: 882 VEAFYELFNVMEKN 895
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 178/426 (41%), Gaps = 63/426 (14%)
Query: 200 ETGPLPNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 255
+ G +P+ TYT M+ C R+ A ++ + + G NP VV Y I G C+ G VD
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 256 VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLL 315
AH ++ K+ K NS FNA+IHG C G + EA + E+M P V + +L+
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILI 609
Query: 316 NAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQ 375
+ K GD KP YT+ I + + +L D ++ M +
Sbjct: 610 HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFI---QTYCREGRLLDAE-DMMAKMRE 665
Query: 376 NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 435
N + P+ + +++ + GQ A +L+ + G +Q+++ +I + + Y K
Sbjct: 666 NGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQ 725
Query: 436 ------------------ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFT 477
+EL+ +M++ +V P +Y LI G E N + E++F
Sbjct: 726 KGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGIC-EVGNLRVAEKVFD 784
Query: 478 RLVK-AGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMI--------QSC---LC----- 520
+ + GI+ + + L+S + +K ++A +MI +SC +C
Sbjct: 785 HMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKK 844
Query: 521 -------------------PDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTY 561
DE+++ +I + LF M + GC + TY
Sbjct: 845 GEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTY 904
Query: 562 TCLIDG 567
+ LI+G
Sbjct: 905 SLLIEG 910
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 193 bits (490), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 160/578 (27%), Positives = 252/578 (43%), Gaps = 13/578 (2%)
Query: 57 VVRVIKSLNWKIAREKKFGSWVET-HGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVG 115
V RV+ L KF W T +GF HSV + I+ H A M+ + ++L+++V
Sbjct: 111 VPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMV- 169
Query: 116 YCKCD-DSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRS 174
K D D F+ + ++ VF+ L V MLE A Q F K + RS
Sbjct: 170 LSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRS 229
Query: 175 CNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIY 230
CN LL ++ G P + TY IM+ C GD+ A + ++
Sbjct: 230 CNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMK 289
Query: 231 RSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVN 290
G P VTY + I G + G +D ++ + +NA+I+ FC+ G +
Sbjct: 290 FRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLP 349
Query: 291 EALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI 350
LE EMK + P+V SY+ L++AFCK+G + + P+ YTSLI
Sbjct: 350 IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLI 409
Query: 351 LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHE 410
K L D + + N MLQ + N + ++ C + +EA L
Sbjct: 410 ---DANCKIGNLSD-AFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDT 465
Query: 411 QGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFE 470
G+ N SYN +IH K ALEL+ + R + P ++ Y T I G + E
Sbjct: 466 AGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEK-IE 524
Query: 471 MVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALI 530
+ + + + GI N+ YTTL+ + ++ + EM + + V++ LI
Sbjct: 525 AAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLI 584
Query: 531 AVFCNIREMNVACALFQEMSR-IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 589
C + ++ A F +S G N +T +IDG CK + ++ AT LF++M +KG+
Sbjct: 585 DGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGL 644
Query: 590 FPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
PD YT L+ K G + E L +M + LD
Sbjct: 645 VPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLD 682
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 178/418 (42%), Gaps = 16/418 (3%)
Query: 236 PTVVTYGTYIRGLCECGYVDVAHKLVRKL-HCKLHPLNSHCFNAVIHGFCQRGAVNEALE 294
P + L + G ++ A + K+ ++ P C N ++H F + G ++
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSC-NGLLHRFAKLGKTDDVKR 248
Query: 295 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 354
++M + P V++YN++++ CK+GDV + P V Y S+I
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI---- 304
Query: 355 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 414
+ D ++ + M P+ I N ++ C+ G+ L + G+
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364
Query: 415 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVER 474
N SY+ ++ CKE + A++ M + ++P Y++LI K N R
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCK-IGNLSDAFR 423
Query: 475 LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFC 534
L +++ G+ +N TYT LI + +A FG+M + + P+ SY ALI F
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 535 NIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 594
+ M+ A L E+ G P+L Y I G C ++ I+ A + +EMK GI + +
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543
Query: 595 TYTVLIAWYHKHGRIGEKNKLFGEMK---------ANCILLDDGIKKLQDPKLVQFKN 643
YT L+ Y K G E L EMK C+L+D K K V + N
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN 601
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 192 bits (488), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 124/463 (26%), Positives = 220/463 (47%), Gaps = 44/463 (9%)
Query: 206 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
++++Y I+++C + LA +LGK+ + G P +VT + + G C + A LV
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
++ + N+ FN +IHG +EA+ +++ M + PD+++Y ++N CK+
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 322 GDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 381
GD+ +I+ +V YT++I + L + + +L ++ M IRPN
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTII----DALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 382 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMP 441
+ N ++R C G++ +A LL D E+ IN N +++ +I KE A +L
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 442 RMLKRNV-----------------------------------LPGVVNYSTLISGFAKEQ 466
M+KR++ P VV Y+TLI GF K +
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409
Query: 467 SNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSY 526
E +E LF + + G+ NT TY TLI + A F +M+ + PD ++Y
Sbjct: 410 RVEEGME-LFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468
Query: 527 TALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 586
+ L+ C ++ A +F+ + + P++YTY +I+G CK ++ LF +
Sbjct: 469 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 528
Query: 587 KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDG 629
KG+ P+V+ YT +I+ + + G E + LF EMK + L + G
Sbjct: 529 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSG 571
Score = 168 bits (426), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 132/556 (23%), Positives = 239/556 (42%), Gaps = 51/556 (9%)
Query: 109 LLRDIVGYCKCDDSFEQFSTLL-DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVG 167
L R+++ K DD+ + F ++ P S++ FN L+ A + + + +N+
Sbjct: 51 LSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR 110
Query: 168 LELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL---- 221
+ + S N L+ C +M+ G P+I T + +++ C R+
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170
Query: 222 ---------------------------------AAEILGKIYRSGGNPTVVTYGTYIRGL 248
A ++ ++ G P + TYGT + GL
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230
Query: 249 CECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDV 308
C+ G +D+A L++K+ + + +I C VN+AL + EM + P+V
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 309 YSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKL-KGQQLYDK 365
+YN L+ C G +I P++V +++LI + + KL + ++LYD+
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 366 SLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIH 425
M++ +I P+ + ++ C + EA + E + N +YN +I
Sbjct: 351 -------MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 403
Query: 426 MICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGIT 485
CK + +EL M +R ++ V Y+TLI G + + +M +++F ++V G+
Sbjct: 404 GFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLF-QAGDCDMAQKIFKKMVSDGVP 462
Query: 486 FNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACAL 545
+ TY+ L+ + K KA F + +S + PD +Y +I C ++ L
Sbjct: 463 PDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDL 522
Query: 546 FQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHK 605
F +S G PN+ YT +I GFC+ + A LF EMK G P+ TY LI +
Sbjct: 523 FCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLR 582
Query: 606 HGRIGEKNKLFGEMKA 621
G +L EM++
Sbjct: 583 DGDKAASAELIKEMRS 598
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 156/339 (46%), Gaps = 11/339 (3%)
Query: 108 ALLRDIVGYCKCDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNV 166
+L+R + Y + D+ S +++ + +V+ F+ LI F L A +++
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 167 GLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--A 222
++ I + + L+ ++ PN+ TY ++ C R+
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 223 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHG 282
E+ ++ + G VTY T I+GL + G D+A K+ +K+ P + ++ ++ G
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 283 FCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPS 342
C+ G + +AL V E ++ S+ PD+Y+YN+++ CK G V +KP+
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 343 IVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREA 401
++ YT++I C+ LK +++ ++ M ++ PN+ N ++R R+G +
Sbjct: 535 VIIYTTMISGFCRKGLK-----EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 589
Query: 402 LTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
L+++ G + + + +I+M+ K LE++
Sbjct: 590 AELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 628
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 117/254 (46%), Gaps = 7/254 (2%)
Query: 394 REGQFREALTLLEDFHEQGINLNQYSYN---EIIHMICKESYPKMALELMPRMLKRNVLP 450
R Q R+A L F +G+ + SY+ ++ + + A++L M++ LP
Sbjct: 22 RFAQLRKASPL---FSLRGVYFSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLP 78
Query: 451 GVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCR 510
+V ++ L+S AK + F++V L R+ I+++ +Y LI+ R + A
Sbjct: 79 SIVEFNKLLSAIAK-MNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
G+M++ PD V+ ++L+ +C+ + ++ A AL +M + PN T+ LI G
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 571 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 630
+ A L D M +G PD+ TY ++ K G I L +M+ I D I
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 631 KKLQDPKLVQFKNV 644
L +KNV
Sbjct: 258 YTTIIDALCNYKNV 271
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 189 bits (480), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 219/464 (47%), Gaps = 46/464 (9%)
Query: 206 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
N +TY+I+++C + LA +LGK+ + G P +VT + + G C + A LV
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
++ + N+ FN +IHG +EA+ +++ M + PD+ +Y +++N CK+
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 322 GDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 380
GD +++P ++ Y ++I LCK K D +L ++ M IRP
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH-----MDDALNLFKEMETKGIRP 289
Query: 381 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
N + + ++ C G++ +A LL D E+ IN + ++++ +I KE A +L
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 441 PRMLKRNVLPGVVNYSTLISGF--------AKEQSNFEMVER------------------ 474
M+KR++ P +V YS+LI+GF AK+ F MV +
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEF-MVSKHCFPDVVTYNTLIKGFCK 408
Query: 475 ---------LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVS 525
+F + + G+ NT TY LI + A F EM+ + P+ ++
Sbjct: 409 YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMT 468
Query: 526 YTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 585
Y L+ C ++ A +F+ + R P +YTY +I+G CK ++ LF +
Sbjct: 469 YNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLS 528
Query: 586 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDG 629
KG+ PDVV Y +I+ + + G E + LF EMK + L + G
Sbjct: 529 LKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 192/416 (46%), Gaps = 10/416 (2%)
Query: 198 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++ G P++ TY ++++ GD LA +L K+ + P V+ Y T I GLC+ +
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 271
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
+D A L +++ K N ++++I C G ++A +L +M + PDV++++
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
L++AF K+G + I PSIV Y+SLI N D++ +++ M
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI----NGFCMHDRLDEAKQMFEFM 387
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
+ P+ + N +++ C+ + E + + + ++G+ N +YN +I + +
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTT 493
MA E+ M+ V P ++ Y+TL+ G K E +F L ++ + TY
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK-NGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 494 LISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIG 553
+I + K + F + + PD V+Y +I+ FC A ALF+EM G
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDG 566
Query: 554 CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
LPN Y LI + + + +L EM+ G D T ++ H GR+
Sbjct: 567 TLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH-DGRL 621
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 186/405 (45%), Gaps = 9/405 (2%)
Query: 222 AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIH 281
A + G++ +S P+++ + + + + DV L ++ P N + ++ +I+
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 282 GFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKP 341
FC+R + AL VL +M P++ + + LLN +C + +P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 342 SIVNYTSLI--LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFR 399
+ V + +LI L NK +++ + + M+ +P+ + ++ C+ G
Sbjct: 185 NTVTFNTLIHGLFLHNKAS------EAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 400 EALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLI 459
A LL + + YN II +CK + AL L M + + P VV YS+LI
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
Query: 460 SGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCL 519
S + RL + +++ I + T++ LI + K +A + EM++ +
Sbjct: 299 SCLCN-YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357
Query: 520 CPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 579
P V+Y++LI FC ++ A +F+ M C P++ TY LI GFCK ++ +
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGME 417
Query: 580 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 624
+F EM ++G+ + VTY +LI + G ++F EM ++ +
Sbjct: 418 VFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 462
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 148/339 (43%), Gaps = 11/339 (3%)
Query: 108 ALLRDIVGYCKCDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNV 166
+L+ + Y + D+ S +++ + V F+ LI F L A +++
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 167 GLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--A 222
++ I + + L+ ++ P++ TY ++ C R+
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 223 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHG 282
E+ ++ + G VTY I+GL + G D+A ++ +++ P N +N ++ G
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 283 FCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPS 342
C+ G + +A+ V E ++ S+ P +Y+YN+++ CK G V +KP
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 343 IVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREA 401
+V Y ++I C+ KG + +++ ++ M ++ PN+ N ++R R+G +
Sbjct: 536 VVAYNTMISGFCR---KGSK--EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 402 LTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
L+++ G + + + +M+ K L+++
Sbjct: 591 AELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 629
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 126/430 (29%), Positives = 215/430 (50%), Gaps = 12/430 (2%)
Query: 206 NIHTYTIMMS--C--GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
N++TY+I ++ C + LA ILGK+ + G P++VT + + G C + A LV
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
++ + ++ F ++HG Q +EA+ ++E M PD+ +Y ++N CK+
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228
Query: 322 GDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 380
G+ +I+ +V Y ++I LCK K D + +++N M I+P
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKH-----MDDAFDLFNKMETKGIKP 283
Query: 381 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
+ N ++ C G++ +A LL D E+ IN + +N +I KE A +L
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 441 PRMLK-RNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHG 499
M+K ++ P VV Y+TLI GF K + E +E +F + + G+ NT TYTTLI
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGME-VFREMSQRGLVGNTVTYTTLIHGFF 402
Query: 500 RTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLY 559
+ R A F +M+ + PD ++Y L+ CN + A +F+ M + ++
Sbjct: 403 QARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIV 462
Query: 560 TYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
TYT +I+ CK ++ LF + KG+ P+VVTYT +++ + + G E + LF EM
Sbjct: 463 TYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEM 522
Query: 620 KANCILLDDG 629
K + L + G
Sbjct: 523 KEDGPLPNSG 532
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 141/341 (41%), Gaps = 36/341 (10%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
V+++N +I ++ A +F + G++ + + N L+ CL
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 196 XXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGG-NPTVVTYGTYIRGLCE 250
++E P++ + ++ G + A ++ ++ +S P VV Y T I+G C+
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Query: 251 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 310
V+ ++ R++ + N+ + +IHGF Q + A V ++M S PD+ +
Sbjct: 369 YKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMT 428
Query: 311 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--------------LLCKNK 356
YN+LL+ C G+V +K IV YT++I L C
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS 488
Query: 357 LKG-----------------QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFR 399
LKG + L +++ ++ M ++ PN+ N ++R R+G
Sbjct: 489 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEA 548
Query: 400 EALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
+ L+++ G + ++ + +M+ K L+++
Sbjct: 549 ASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSFLDML 589
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 1/192 (0%)
Query: 436 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
A+ L M+K P +V +S L+S AK + F++V L ++ GI+ N TY+ I
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAK-MNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 496 SIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCL 555
+ R + A G+M++ P V+ +L+ FC+ ++ A AL +M +G
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 556 PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL 615
P+ T+T L+ G + + A L + M KG PD+VTY +I K G L
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 616 FGEMKANCILLD 627
+M+ I D
Sbjct: 238 LNKMEKGKIEAD 249
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 134/526 (25%), Positives = 248/526 (47%), Gaps = 10/526 (1%)
Query: 109 LLRDIVGYCKCDDSFEQFSTLL-DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVG 167
L R+ + + K D++ + F ++ P S++ F+ L+ A + + +G
Sbjct: 36 LSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILG 95
Query: 168 LELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--AA 223
+ ++ + N ++ CL +M+ G P+I T +++ C R+ A
Sbjct: 96 VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155
Query: 224 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 283
++ ++ G P VT+ T + GL + A LV ++ K + + AVI+G
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215
Query: 284 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 343
C+RG + AL +L +M+ + DV Y+ ++++ CK V I+P +
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275
Query: 344 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 403
Y+SLI N + + + + + ML+ I PN + N ++ +EG+ EA
Sbjct: 276 FTYSSLISCLCNYGR----WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 404 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 463
L ++ ++ I+ N +YN +I+ C A ++ M+ ++ LP VV Y+TLI+GF
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 464 KEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDE 523
K + + +E LF + + G+ NT TYTTLI + A F +M+ + P+
Sbjct: 392 KAKKVVDGME-LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNI 450
Query: 524 VSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE 583
++Y L+ C ++ A +F+ + + P++YTY + +G CK ++ LF
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510
Query: 584 MKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDG 629
+ KG+ PDV+ Y +I+ + K G E LF +MK + L D G
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 126/493 (25%), Positives = 216/493 (43%), Gaps = 13/493 (2%)
Query: 135 HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXX 194
H++ +N++I S L A + +G I + N LL
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 195 XXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE 250
++E G P+ T+T ++ A ++ ++ G P +VTYG I GLC+
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 217
Query: 251 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 310
G D+A L+ K+ + ++ VI C+ V++AL + EM + PDV++
Sbjct: 218 RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 311 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVY 370
Y+ L++ C G +I P++V + SLI + + ++ +++
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLI----DAFAKEGKLIEAEKLF 333
Query: 371 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 430
+ M+Q +I PN + N ++ C + EA + + + +YN +I+ CK
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 431 SYPKMALELMPRMLKRNVLPGVVNYSTLISGF--AKEQSNFEMVERLFTRLVKAGITFNT 488
+EL M +R ++ V Y+TLI GF A + N +MV F ++V G+ N
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV---FKQMVSDGVHPNI 450
Query: 489 KTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQE 548
TY TL+ + K KA F + +S + PD +Y + C ++ LF
Sbjct: 451 MTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510
Query: 549 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 608
+S G P++ Y +I GFCK + A LF +MK G PD TY LI + + G
Sbjct: 511 LSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGD 570
Query: 609 IGEKNKLFGEMKA 621
+L EM++
Sbjct: 571 KAASAELIKEMRS 583
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 176/395 (44%), Gaps = 29/395 (7%)
Query: 234 GNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEAL 293
+P+ G Y GL GY KL R NA++H ++EA+
Sbjct: 13 ASPSFCLRGIYFSGLSYDGY---REKLSR--------------NALLHL-----KLDEAV 50
Query: 294 EVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LL 352
++ EM SR FP + ++ LL+A K + ++ Y +I L
Sbjct: 51 DLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCL 110
Query: 353 CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQG 412
C+ + Q + +L + M++ P+ + N +L C + EA+ L++ E G
Sbjct: 111 CR---RSQLSF--ALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 413 INLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV 472
+ ++ ++H + + + A+ L+ RM+ + P +V Y +I+G K + ++
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK-RGEPDLA 224
Query: 473 ERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAV 532
L ++ K I + Y+T+I + R A F EM + PD +Y++LI+
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 533 FCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPD 592
CN + A L +M PN+ T+ LID F K + A +LFDEM ++ I P+
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 593 VVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
+VTY LI + H R+ E ++F M + L D
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 155/350 (44%), Gaps = 16/350 (4%)
Query: 101 GMHLEVF---ALLRDIVGYCKCDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHA 156
G+ +VF +L+ + Y + D+ S +L+ + +V+ FN LI FA L A
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 157 HQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS- 215
++F ++ +I + N L+ ++ LP++ TY +++
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 216 -CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCK-LHPL 271
C ++ E+ + R G VTY T I G + D A + +++ +HP
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP- 448
Query: 272 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 331
N +N ++ G C+ G + +A+ V E ++ S+ PD+Y+YN++ CK G V
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Query: 332 XXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 390
+KP ++ Y ++I CK LK +++ ++ M ++ P++ N ++R
Sbjct: 509 CSLSLKGVKPDVIAYNTMISGFCKKGLK-----EEAYTLFIKMKEDGPLPDSGTYNTLIR 563
Query: 391 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
H R+G + L+++ + +Y + M+ K LE++
Sbjct: 564 AHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFLEVL 613
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 187 bits (474), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 130/527 (24%), Positives = 250/527 (47%), Gaps = 12/527 (2%)
Query: 109 LLRDIVGYCKCDDSFEQFSTLL-DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVG 167
+LR+ + K DD+ F ++ P S+ FN L+ A + + + +G
Sbjct: 56 ILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLG 115
Query: 168 LELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--AA 223
+ ++ + N L+ C +M+ G P+I T + +++ C R+ A
Sbjct: 116 ISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 224 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 283
++ ++ G P +T+ T I GL A LV ++ + N + V++G
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 284 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 343
C+RG ++ A +L +M++++ +V Y+ ++++ CK ++P++
Sbjct: 236 CKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 295
Query: 344 VNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREAL 402
+ Y+SLI LC + + + + + M++ I PN + N ++ +EG+ EA
Sbjct: 296 ITYSSLISCLCN-----YERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 403 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 462
L ++ ++ I+ + ++Y+ +I+ C A + M+ ++ P VV Y+TLI+GF
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410
Query: 463 AKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPD 522
K + E VE LF + + G+ NT TYTTLI + R A F +M+ + P+
Sbjct: 411 CKAKRIDEGVE-LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPN 469
Query: 523 EVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 582
++Y L+ C ++ A +F+ + R P +YTY +I+G CK ++ LF
Sbjct: 470 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 529
Query: 583 EMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDG 629
+ KG+ PDV+ Y +I+ + + G E + LF +M+ + L D G
Sbjct: 530 SLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSG 576
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 141/557 (25%), Positives = 240/557 (43%), Gaps = 55/557 (9%)
Query: 121 DSFEQFSTLLDLPHHSV----LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCN 176
DSF QF LL + VF+V +V +L A +VF N GL L + SCN
Sbjct: 155 DSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCN 214
Query: 177 -FLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYR 231
+L + E G N+ +Y I++ G I+ A +L +
Sbjct: 215 VYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMEL 274
Query: 232 SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 291
G P V++Y T + G C G +D KL+ + K NS+ + ++I C+ + E
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334
Query: 292 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL 351
A E EM PD Y L++ FCK+GD+ I P ++ YT++I
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 352 -LCKNKLKGQQLYD--KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 408
C Q+ D ++ ++++ M + P+++ ++ +C+ G ++A +
Sbjct: 395 GFC-------QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 409 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN 468
+ G + N +Y +I +CKE A EL+ M K + P + Y+++++G K N
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK-SGN 506
Query: 469 FEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKA--------------------- 507
E +L AG+ +T TYTTL+ + ++ + KA
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 508 ----YCRFG----------EMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIG 553
+C G M+ + P+ ++ +L+ +C + A A++++M G
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 554 CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKN 613
P+ TY L+ G CK + A LF EMK KG V TY+VLI + K + E
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 686
Query: 614 KLFGEMKANCILLDDGI 630
++F +M+ + D I
Sbjct: 687 EVFDQMRREGLAADKEI 703
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 141/557 (25%), Positives = 240/557 (43%), Gaps = 55/557 (9%)
Query: 121 DSFEQFSTLLDLPHHSV----LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCN 176
DSF QF LL + VF+V +V +L A +VF N GL L + SCN
Sbjct: 155 DSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCN 214
Query: 177 -FLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYR 231
+L + E G N+ +Y I++ G I+ A +L +
Sbjct: 215 VYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMEL 274
Query: 232 SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 291
G P V++Y T + G C G +D KL+ + K NS+ + ++I C+ + E
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334
Query: 292 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL 351
A E EM PD Y L++ FCK+GD+ I P ++ YT++I
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 352 -LCKNKLKGQQLYD--KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 408
C Q+ D ++ ++++ M + P+++ ++ +C+ G ++A +
Sbjct: 395 GFC-------QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 409 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN 468
+ G + N +Y +I +CKE A EL+ M K + P + Y+++++G K N
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK-SGN 506
Query: 469 FEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKA--------------------- 507
E +L AG+ +T TYTTL+ + ++ + KA
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 508 ----YCRFG----------EMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIG 553
+C G M+ + P+ ++ +L+ +C + A A++++M G
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRG 626
Query: 554 CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKN 613
P+ TY L+ G CK + A LF EMK KG V TY+VLI + K + E
Sbjct: 627 VGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAR 686
Query: 614 KLFGEMKANCILLDDGI 630
++F +M+ + D I
Sbjct: 687 EVFDQMRREGLAADKEI 703
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/464 (27%), Positives = 218/464 (46%), Gaps = 48/464 (10%)
Query: 206 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
+++T TIM++C + A +LG+ ++ G P +T+ T + G C G V A LV
Sbjct: 104 DMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALV 163
Query: 262 -RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 320
R + K P + + +I+G C +G V+EAL +++ M PD +Y +LN CK
Sbjct: 164 DRMVEMKQRP-DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCK 222
Query: 321 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIR 379
G+ IK S+V Y+ +I LCK+ +D +L ++N M I+
Sbjct: 223 SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD-----GSFDDALSLFNEMEMKGIK 277
Query: 380 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 439
+ + + ++ C +G++ + +L + + I + +++ +I + KE A EL
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 440 MPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHG 499
M+ R + P + Y++LI GF KE E ++F +V G + TY+ LI+ +
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHE-ANQMFDLMVSKGCEPDIVTYSILINSYC 396
Query: 500 RTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLY 559
+ ++ F E+ L P+ ++Y L+ FC ++N A LFQEM G P++
Sbjct: 397 KAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV 456
Query: 560 TYTCLIDGFCKIDYIDLATQLFDEMKR--------------------------------- 586
TY L+DG C ++ A ++F++M++
Sbjct: 457 TYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSL 516
Query: 587 --KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 628
KG+ PDVVTY V+I K G + E + LF +MK + DD
Sbjct: 517 SDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDD 560
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 149/351 (42%), Gaps = 7/351 (1%)
Query: 217 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 276
G A + ++ G VVTY + I GLC G D K++R++ + + F
Sbjct: 259 GSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTF 318
Query: 277 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 336
+A+I F + G + EA E+ EM + PD +YN L++ FCK+ +
Sbjct: 319 SALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVS 378
Query: 337 CQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
+P IV Y+ LI CK K D + ++ + + PNTI N ++ C+
Sbjct: 379 KGCEPDIVTYSILINSYCKAKR-----VDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
G+ A L ++ +G+ + +Y ++ +C ALE+ +M K + G+ Y
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493
Query: 456 STLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMI 515
+ +I G S + LF L G+ + TY +I + +A F +M
Sbjct: 494 NIIIHGMCN-ASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMK 552
Query: 516 QSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLID 566
+ PD+ +Y LI + + L +EM G + T +ID
Sbjct: 553 EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 152/359 (42%), Gaps = 18/359 (5%)
Query: 93 IIHTFAMAGMHLEVFALLRDIVGYC---KCDDSFEQFSTLLD---LPHHSVLVFNVLIKV 146
+ + M G+ +V I G C K DD + ++ +P V+ F+ LI V
Sbjct: 267 LFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPD--VVTFSALIDV 324
Query: 147 FASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPN 206
F L A +++ G+ + N L+ ++ G P+
Sbjct: 325 FVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPD 384
Query: 207 IHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVR 262
I TY+I+++ C R+ + +I G P +TY T + G C+ G ++ A +L +
Sbjct: 385 IVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQ 444
Query: 263 KLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKG 322
++ + P + + ++ G C G +N+ALE+ E+M+ SR + YN++++ C
Sbjct: 445 EMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNAS 504
Query: 323 DVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 381
V +KP +V Y +I LCK KG ++ ++ M ++ P+
Sbjct: 505 KVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK---KGS--LSEADMLFRKMKEDGCTPD 559
Query: 382 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
N ++R H ++ L+E+ G + + + +I M+ K L+++
Sbjct: 560 DFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDML 618
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 182 bits (463), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 129/525 (24%), Positives = 246/525 (46%), Gaps = 13/525 (2%)
Query: 110 LRDIVGYCKCDDSFEQFSTLL-DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGL 168
L DI+ K DD+ + F ++ P S++ FN L+ A + E + + +G+
Sbjct: 58 LSDII---KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 169 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--AAE 224
+ + + + C +M+ G P+I T + +++ C R+ A
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 225 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 284
++ ++ G P T+ T I GL A LV ++ + + + V++G C
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 285 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 344
+RG ++ AL +L++M+ + DV YN +++ CK + I+P +
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 345 NYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 404
Y+SLI N + + + + + M++ I PN + + ++ +EG+ EA L
Sbjct: 295 TYSSLISCLCNYGR----WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKL 350
Query: 405 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 464
++ ++ I+ + ++Y+ +I+ C A + M+ ++ P VV YSTLI GF K
Sbjct: 351 YDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK 410
Query: 465 EQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEV 524
+ E +E LF + + G+ NT TYTTLI + R A F +M+ + P+ +
Sbjct: 411 AKRVEEGME-LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 525 SYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM 584
+Y L+ C ++ A +F+ + R P++YTY +I+G CK ++ +LF +
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 585 KRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDG 629
KG+ P+V+ Y +I+ + + G E + L +MK + L + G
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 131/507 (25%), Positives = 228/507 (44%), Gaps = 21/507 (4%)
Query: 124 EQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLX 183
EQ TL H + +++ I F S L A V +G E I + + LL
Sbjct: 107 EQMQTLG--ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYC 164
Query: 184 XXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVV 239
++E G P+ T+T ++ A ++ ++ + G P +V
Sbjct: 165 HSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV 224
Query: 240 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 299
TYGT + GLC+ G +D+A L++K+ + +N +I G C+ +++AL + EM
Sbjct: 225 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Query: 300 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKL 357
+ PDV++Y+ L++ C G +I P++V +++LI + + KL
Sbjct: 285 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 344
Query: 358 -KGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLN 416
+ ++LYD+ M++ +I P+ + ++ C + EA + E + N
Sbjct: 345 VEAEKLYDE-------MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 417 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF--AKEQSNFEMVER 474
+Y+ +I CK + +EL M +R ++ V Y+TLI GF A++ N +MV
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV-- 455
Query: 475 LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFC 534
F ++V G+ N TY L+ + K KA F + +S + PD +Y +I C
Sbjct: 456 -FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 514
Query: 535 NIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 594
++ LF +S G PN+ Y +I GFC+ + A L +MK G P+
Sbjct: 515 KAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574
Query: 595 TYTVLIAWYHKHGRIGEKNKLFGEMKA 621
TY LI + G +L EM++
Sbjct: 575 TYNTLIRARLRDGDREASAELIKEMRS 601
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 141/268 (52%), Gaps = 1/268 (0%)
Query: 352 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 411
+ +N+L D +++++ M+++ P+ + N +L + +F ++L E
Sbjct: 53 ILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTL 112
Query: 412 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEM 471
GI+ + Y+Y+ I+ C+ S +AL ++ +M+K P +V S+L++G+ + +
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDA 172
Query: 472 VERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIA 531
V L ++V+ G +T T+TTLI K +A +M+Q PD V+Y ++
Sbjct: 173 VA-LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 532 VFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFP 591
C ++++A +L ++M + ++ Y +IDG CK ++D A LF EM KGI P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 592 DVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
DV TY+ LI+ +GR + ++L +M
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDM 319
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 151/350 (43%), Gaps = 16/350 (4%)
Query: 101 GMHLEVF---ALLRDIVGYCKCDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHA 156
G+ +VF +L+ + Y + D+ S +++ + +V+ F+ LI F L A
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 157 HQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS- 215
+++ ++ I + + L+ ++ PN+ TY+ ++
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 216 -CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKL-HCKLHPL 271
C R+ E+ ++ + G VTY T I G + D A + +++ +HP
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP- 466
Query: 272 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 331
N +N ++ G C+ G + +A+ V E ++ S PD+Y+YN+++ CK G V
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Query: 332 XXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 390
+ P+++ Y ++I C+ KG + SL M ++ PN+ N ++R
Sbjct: 527 CNLSLKGVSPNVIAYNTMISGFCR---KGSKEEADSL--LKKMKEDGPLPNSGTYNTLIR 581
Query: 391 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
R+G + L+++ G + + + +M+ K L+++
Sbjct: 582 ARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 631
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 181 bits (460), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 216/488 (44%), Gaps = 16/488 (3%)
Query: 139 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 198
VF++LI+ + L AH+ F ++ G + I +CN L+ L +
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 199 METGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 254
+G N++T IM++ G + L ++ G P +VTY T I G +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 255 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 314
+ A +L+ + K + +N VI+G C+ G A EV EM S PD +Y L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 315 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML 374
L CKKGDV + P +V ++S++ L DK+L +NS+
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGN----LDKALMYFNSVK 402
Query: 375 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 434
+ + P+ +I +++ +CR+G A+ L + +QG ++ +YN I+H +CK
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 435 MALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTL 494
A +L M +R + P + LI G K N + LF ++ + I + TY TL
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCK-LGNLQNAMELFQKMKEKRIRLDVVTYNTL 521
Query: 495 ISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGC 554
+ G+ A + +M+ + P +SY+ L+ C+ + A ++ EM
Sbjct: 522 LDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 555 LPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKN- 613
P + +I G+C+ ++M +G PD ++Y LI +G + E+N
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI-----YGFVREENM 636
Query: 614 -KLFGEMK 620
K FG +K
Sbjct: 637 SKAFGLVK 644
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 181/403 (44%), Gaps = 27/403 (6%)
Query: 233 GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEA 292
G N +V + IR + + AH+ L K ++ NA+I + G V A
Sbjct: 162 GSNDSV--FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELA 219
Query: 293 LEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL 352
V +E+ S +VY+ N+++NA CK G + + P IV Y +LI
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLI-- 277
Query: 353 CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQG 412
+ + L +++ E+ N+M P N ++ C+ G++ A + + G
Sbjct: 278 --SAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 413 INLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV 472
++ + +Y ++ CK+ ++ M R+V+P +V +S+++S F + N +
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTR-SGNLDKA 394
Query: 473 ERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFG----------EMIQSCLCPD 522
F + +AG+ + YT LI + YCR G EM+Q D
Sbjct: 395 LMYFNSVKEAGLIPDNVIYTILI----------QGYCRKGMISVAMNLRNEMLQQGCAMD 444
Query: 523 EVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 582
V+Y ++ C + + A LF EM+ P+ YT T LIDG CK+ + A +LF
Sbjct: 445 VVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQ 504
Query: 583 EMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 625
+MK K I DVVTY L+ + K G I +++ +M + IL
Sbjct: 505 KMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEIL 547
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/286 (22%), Positives = 117/286 (40%), Gaps = 57/286 (19%)
Query: 399 REALTLLEDFHEQ-GINLNQY-----SYNEIIHMICKESYPKMALELMPRMLKRNVLPGV 452
R LTL + F +Q G + + S + +IH++ + A + RM++R+ + +
Sbjct: 89 RNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGVSRL 148
Query: 453 VNYSTLISGFAKEQSN---FEMVER----------------------------------- 474
++L S F+ SN F+++ R
Sbjct: 149 EIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIG 208
Query: 475 -------------LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCP 521
++ + ++G+ N T +++ + K K ++ + + P
Sbjct: 209 SLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYP 268
Query: 522 DEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLF 581
D V+Y LI+ + + M A L M G P +YTY +I+G CK + A ++F
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328
Query: 582 DEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
EM R G+ PD TY L+ K G + E K+F +M++ ++ D
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPD 374
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/527 (25%), Positives = 245/527 (46%), Gaps = 12/527 (2%)
Query: 109 LLRDIVGYCKCDDSFEQFSTLL-DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVG 167
+LR+ + K DD+ F ++ P S++ FN L+ A + + + +
Sbjct: 56 ILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLE 115
Query: 168 LELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--AA 223
+ + + N L+ C +M+ G P+I T + +++ C R+ A
Sbjct: 116 IVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 224 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 283
++ ++ G P +T+ T I GL A LV ++ + N + V++G
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 284 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 343
C+RG + AL +L +M++++ DV +N ++++ CK V I+P++
Sbjct: 236 CKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 295
Query: 344 VNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREAL 402
V Y+SLI LC + + ++ + M++ I PN + N ++ +EG+F EA
Sbjct: 296 VTYSSLISCLCS-----YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 403 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 462
L +D ++ I+ + ++YN +++ C A ++ M+ ++ P VV Y+TLI GF
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 463 AKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPD 522
K + + E LF + G+ +T TYTTLI A F +M+ + PD
Sbjct: 411 CKSKRVEDGTE-LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPD 469
Query: 523 EVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 582
++Y+ L+ CN ++ A +F M + ++Y YT +I+G CK +D LF
Sbjct: 470 IMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFC 529
Query: 583 EMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDG 629
+ KG+ P+VVTY +I+ + E L +MK + L + G
Sbjct: 530 SLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 215/445 (48%), Gaps = 16/445 (3%)
Query: 206 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
++TY I+++C I LA +LGK+ + G P++VT + + G C + A LV
Sbjct: 119 GLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
++ + ++ F +IHG +EA+ +++ M P++ +Y +++N CK+
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 322 GDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 380
GD +I+ +V + ++I LCK + D +L ++ M IRP
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK-----YRHVDDALNLFKEMETKGIRP 293
Query: 381 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
N + + ++ C G++ +A LL D E+ IN N ++N +I KE A +L
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 441 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGR 500
M+KR++ P + Y++L++GF + +++F +V + TY TLI +
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCM-HDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 501 TRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYT 560
+++ F EM L D V+YT LI + + + A +F++M G P++ T
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 472
Query: 561 YTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM- 619
Y+ L+DG C ++ A ++FD M++ I D+ YT +I K G++ + LF +
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 532
Query: 620 ----KANCILLDDGIKKLQDPKLVQ 640
K N + + I L +L+Q
Sbjct: 533 LKGVKPNVVTYNTMISGLCSKRLLQ 557
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/491 (23%), Positives = 215/491 (43%), Gaps = 9/491 (1%)
Query: 135 HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXX 194
H + +N+LI F S + A + +G E I + + LL
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 195 XXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE 250
++E G P+ T+T ++ A ++ ++ + G P +VTYG + GLC+
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 251 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 310
G D+A L+ K+ + FN +I C+ V++AL + +EM++ P+V +
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297
Query: 311 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVY 370
Y+ L++ C G +I P++V + +LI + + + ++ ++Y
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI----DAFVKEGKFVEAEKLY 353
Query: 371 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 430
+ M++ +I P+ N ++ C + +A + E + + +YN +I CK
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 431 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKT 490
+ EL M R ++ V Y+TLI G + + + +++F ++V G+ + T
Sbjct: 414 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD-GDCDNAQKVFKQMVSDGVPPDIMT 472
Query: 491 YTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMS 550
Y+ L+ K KA F M +S + D YT +I C +++ LF +S
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 532
Query: 551 RIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIG 610
G PN+ TY +I G C + A L +MK G P+ TY LI + + G
Sbjct: 533 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKA 592
Query: 611 EKNKLFGEMKA 621
+L EM++
Sbjct: 593 ASAELIREMRS 603
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 1/209 (0%)
Query: 419 SYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTR 478
Y EI+ + A+ L M+K LP +V ++ L+S AK + F++V L +
Sbjct: 52 DYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMK-KFDVVISLGEK 110
Query: 479 LVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIRE 538
+ + I TY LI+ R + A G+M++ P V+ ++L+ +C+ +
Sbjct: 111 MQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 539 MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTV 598
++ A AL +M +G P+ T+T LI G + A L D M ++G P++VTY V
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 599 LIAWYHKHGRIGEKNKLFGEMKANCILLD 627
++ K G L +M+A I D
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEAD 259
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/502 (25%), Positives = 233/502 (46%), Gaps = 11/502 (2%)
Query: 133 PHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXX 192
P S+ FN L+ A + + + +G+ ++ + N L+ C
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 193 XXXXXLMETGPLPNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGL 248
+M+ G P+I T + +++ C R+ A ++ ++ G P +T+ T I GL
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 249 CECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDV 308
A LV ++ + N + V++G C+RG ++ A +L +M++++ DV
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 309 YSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSL 367
+N ++++ CK V I+P++V Y+SLI LC + +
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLC-----SYGRWSDAS 240
Query: 368 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
++ + M++ I PN + N ++ +EG+F EA L +D ++ I+ + ++YN +I+
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300
Query: 428 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFN 487
C A ++ M+ ++ P + Y+TLI GF K + + E LF + G+ +
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE-LFREMSHRGLVGD 359
Query: 488 TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQ 547
T TYTTLI A F +M+ + PD ++Y+ L+ CN ++ A +F
Sbjct: 360 TVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD 419
Query: 548 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 607
M + ++Y YT +I+G CK +D LF + KG+ P+VVTY +I+
Sbjct: 420 YMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKR 479
Query: 608 RIGEKNKLFGEMKANCILLDDG 629
+ E L +MK + L D G
Sbjct: 480 LLQEAYALLKKMKEDGPLPDSG 501
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/445 (26%), Positives = 217/445 (48%), Gaps = 16/445 (3%)
Query: 206 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
N++TY I+++C I LA +LGK+ + G P++VT + + G C + A LV
Sbjct: 44 NLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 103
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
++ + ++ F +IHG +EA+ +++ M P++ +Y +++N CK+
Sbjct: 104 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 163
Query: 322 GDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 380
GD+ +I+ +V + ++I LCK + D +L ++ M IRP
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK-----YRHVDDALNLFKEMETKGIRP 218
Query: 381 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
N + + ++ C G++ +A LL D E+ IN N ++N +I KE A +L
Sbjct: 219 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLH 278
Query: 441 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGR 500
M+KR++ P + Y++LI+GF + +++F +V + TY TLI +
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCM-HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Query: 501 TRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYT 560
+++ F EM L D V+YT LI + + + A +F++M G P++ T
Sbjct: 338 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMT 397
Query: 561 YTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM- 619
Y+ L+DG C ++ A ++FD M++ I D+ YT +I K G++ + LF +
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457
Query: 620 ----KANCILLDDGIKKLQDPKLVQ 640
K N + + I L +L+Q
Sbjct: 458 LKGVKPNVVTYNTMISGLCSKRLLQ 482
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 117/491 (23%), Positives = 217/491 (44%), Gaps = 9/491 (1%)
Query: 135 HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXX 194
H++ +N+LI F S + A + +G E I + + LL
Sbjct: 43 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 102
Query: 195 XXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE 250
++E G P+ T+T ++ A ++ ++ + G P +VTYG + GLC+
Sbjct: 103 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 162
Query: 251 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 310
G +D+A L+ K+ + FN +I C+ V++AL + +EM++ P+V +
Sbjct: 163 RGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 222
Query: 311 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVY 370
Y+ L++ C G +I P++V + +LI + + + ++ +++
Sbjct: 223 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI----DAFVKEGKFVEAEKLH 278
Query: 371 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 430
+ M++ +I P+ N ++ C + +A + E + + +YN +I CK
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 431 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKT 490
+ EL M R ++ V Y+TLI G + + + +++F ++V G+ + T
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD-GDCDNAQKVFKQMVSDGVPPDIMT 397
Query: 491 YTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMS 550
Y+ L+ K KA F M +S + D YT +I C +++ LF +S
Sbjct: 398 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 457
Query: 551 RIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIG 610
G PN+ TY +I G C + A L +MK G PD TY LI + + G
Sbjct: 458 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKA 517
Query: 611 EKNKLFGEMKA 621
+L EM++
Sbjct: 518 ASAELIREMRS 528
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 1/185 (0%)
Query: 443 MLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTR 502
M+K LP + ++ L+S AK + F++V L ++ + GI+ N TY LI+ R
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKK-FDLVISLGEKMQRLGISHNLYTYNILINCFCRRS 59
Query: 503 KRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYT 562
+ A G+M++ P V+ ++L+ +C+ + ++ A AL +M +G P+ T+T
Sbjct: 60 QISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFT 119
Query: 563 CLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
LI G + A L D M ++G P++VTY V++ K G I L +M+A
Sbjct: 120 TLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAA 179
Query: 623 CILLD 627
I D
Sbjct: 180 KIEAD 184
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 203/427 (47%), Gaps = 14/427 (3%)
Query: 198 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
L +G +P++ TY +M+S G+I A +L ++ S P VVTY T +R LC+ G
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGK 219
Query: 254 VDVAHKLV-RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 312
+ A +++ R L +P + + +I C+ V A+++L+EM+ PDV +YN
Sbjct: 220 LKQAMEVLDRMLQRDCYP-DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYN 278
Query: 313 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNS 372
+L+N CK+G + +P+++ + I+L G+ + + L
Sbjct: 279 VLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN--IILRSMCSTGRWMDAEKL--LAD 334
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
ML+ P+ + N ++ CR+G A+ +LE + G N SYN ++H CKE
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
A+E + RM+ R P +V Y+T+++ K+ + VE + +L G + TY
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE-ILNQLSSKGCSPVLITYN 453
Query: 493 TLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI 552
T+I + K KA EM L PD ++Y++L+ +++ A F E R+
Sbjct: 454 TVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERM 513
Query: 553 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 612
G PN T+ ++ G CK D A M +G P+ +YT+LI G E
Sbjct: 514 GIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEA 573
Query: 613 NKLFGEM 619
+L E+
Sbjct: 574 LELLNEL 580
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 192/423 (45%), Gaps = 47/423 (11%)
Query: 202 GPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 257
G +P+I T ++ G R AA+IL + SG P V+TY I G C+ G ++ A
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
++ ++ + +N ++ C G + +A+EVL+ M +PDV +Y +L+ A
Sbjct: 192 LSVLDRMSVSPDVVT---YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248
Query: 318 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 377
C+ V P +V Y L+ N + + D++++ N M +
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV----NGICKEGRLDEAIKFLNDMPSSG 304
Query: 378 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 437
+PN I N ILR C G++ +A LL D +G + + ++N +I+ +C++ A+
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAI 364
Query: 438 ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISI 497
+++ +M + P ++Y+ L+ GF KE+ +E L R+V G
Sbjct: 365 DILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYL-ERMVSRG-------------- 409
Query: 498 HGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPN 557
C PD V+Y ++ C ++ A + ++S GC P
Sbjct: 410 --------------------CY-PDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448
Query: 558 LYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFG 617
L TY +IDG K A +L DEM+ K + PD +TY+ L+ + G++ E K F
Sbjct: 449 LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH 508
Query: 618 EMK 620
E +
Sbjct: 509 EFE 511
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 171/346 (49%), Gaps = 12/346 (3%)
Query: 278 AVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXC 337
+I GFC+ G +A ++LE ++ S PDV +YN++++ +CK G++
Sbjct: 142 TLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM--- 198
Query: 338 QIKPSIVNYTSLIL-LCKN-KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
+ P +V Y +++ LC + KLK +++EV + MLQ P+ I ++ CR+
Sbjct: 199 SVSPDVVTYNTILRSLCDSGKLK------QAMEVLDRMLQRDCYPDVITYTILIEATCRD 252
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
A+ LL++ ++G + +YN +++ ICKE A++ + M P V+ +
Sbjct: 253 SGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITH 312
Query: 456 STLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMI 515
+ ++ + E+L +++ G + + T+ LI+ R +A +M
Sbjct: 313 NIILRSMC-STGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP 371
Query: 516 QSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 575
Q P+ +SY L+ FC ++M+ A + M GC P++ TY ++ CK ++
Sbjct: 372 QHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVE 431
Query: 576 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 621
A ++ +++ KG P ++TY +I K G+ G+ KL EM+A
Sbjct: 432 DAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/378 (23%), Positives = 157/378 (41%), Gaps = 36/378 (9%)
Query: 108 ALLRDIVGYCKCDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNV 166
+LR + K + E +L + V+ + +LI+ +S + HA ++ ++
Sbjct: 209 TILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR 268
Query: 167 GLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTI----MMSCGDIRLA 222
G + + N L+ + + +G PN+ T+ I M S G A
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 223 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHG 282
++L + R G +P+VVT+ I LC G + A ++ K+ NS +N ++HG
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHG 388
Query: 283 FCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPS 342
FC+ ++ A+E LE M S +PD+ +YN +L A CK G V P
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448
Query: 343 IVNYTSLI-LLCKNKLKGQQL------------------------------YDKSLEVYN 371
++ Y ++I L K G+ + D++++ ++
Sbjct: 449 LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH 508
Query: 372 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 431
+ IRPN + N I+ C+ Q A+ L +G N+ SY +I + E
Sbjct: 509 EFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEG 568
Query: 432 YPKMALELMPRMLKRNVL 449
K ALEL+ + + ++
Sbjct: 569 MAKEALELLNELCNKGLM 586
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 18/194 (9%)
Query: 436 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
+ + M+ +P ++ +TLI GF + ++ L +G + TY +I
Sbjct: 121 GFKFLENMVYHGNVPDIIPCTTLIRGFCR-LGKTRKAAKILEILEGSGAVPDVITYNVMI 179
Query: 496 SIHGRTRKRHKAYCRFGEMIQS-------CLCPDEVSYTALIAVFCNIREMNVACALFQE 548
S YC+ GE+ + + PD V+Y ++ C+ ++ A +
Sbjct: 180 S----------GYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 549 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 608
M + C P++ TYT LI+ C+ + A +L DEM+ +G PDVVTY VL+ K GR
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 289
Query: 609 IGEKNKLFGEMKAN 622
+ E K +M ++
Sbjct: 290 LDEAIKFLNDMPSS 303
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 126/305 (41%), Gaps = 23/305 (7%)
Query: 73 KFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDL 132
KF + + + G +V II+ + G ++ LL D++ + FS
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML--------RKGFSP---- 342
Query: 133 PHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXX 192
SV+ FN+LI +L A + G + + S N LL
Sbjct: 343 ---SVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 193 XXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGL 248
++ G P+I TY M++ G + A EIL ++ G +P ++TY T I GL
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 249 CECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDV 308
+ G A KL+ ++ K ++ +++++ G + G V+EA++ E + P+
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 309 YSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLE 368
++N ++ CK KP+ +YT LI L + + ++LE
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI----EGLAYEGMAKEALE 575
Query: 369 VYNSM 373
+ N +
Sbjct: 576 LLNEL 580
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 206/408 (50%), Gaps = 11/408 (2%)
Query: 206 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
N++TY I+++C + LA +LGK+ + G P +VT + + G C + A LV
Sbjct: 112 NLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALV 171
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
++ + ++ F +IHG +EA+ +++ M PD+ +Y ++N CK+
Sbjct: 172 DQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKR 231
Query: 322 GDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 380
GD +I+ ++V Y+++I LCK + + D +L ++ M +RP
Sbjct: 232 GDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE-----DDALNLFTEMENKGVRP 286
Query: 381 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
N I + ++ C G++ +A LL D E+ IN N +++ +I K+ A +L
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 441 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGR 500
M+KR++ P + YS+LI+GF E +++ +++ N TY TLI+ +
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFCMLDRLGE-AKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Query: 501 TRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYT 560
++ K F EM Q L + V+YT LI F R+ + A +F++M +G PN+ T
Sbjct: 406 AKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILT 465
Query: 561 YTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 608
Y L+DG CK + A +F+ ++R + PD+ TY ++I K G+
Sbjct: 466 YNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGK 513
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 186/406 (45%), Gaps = 11/406 (2%)
Query: 218 DIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHC 275
DI L A + G + +S P+++ + + + + D+ K+ N +
Sbjct: 56 DIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYT 115
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
+N +I+ FC+ ++ AL +L +M PD+ + N LLN FC +
Sbjct: 116 YNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175
Query: 336 XCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 393
KP V +T+LI L NK +++ + + M+Q +P+ + ++ C
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKAS------EAVALIDRMVQRGCQPDLVTYGAVVNGLC 229
Query: 394 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 453
+ G AL LL I N Y+ +I +CK + AL L M + V P V+
Sbjct: 230 KRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 289
Query: 454 NYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE 513
YS+LIS + RL + +++ I N T++ LI + K KA + E
Sbjct: 290 TYSSLISCLC-NYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEE 348
Query: 514 MIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 573
MI+ + P+ +Y++LI FC + + A + + M R CLPN+ TY LI+GFCK
Sbjct: 349 MIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKR 408
Query: 574 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
+D +LF EM ++G+ + VTYT LI + + +F +M
Sbjct: 409 VDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 454
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 104/470 (22%), Positives = 189/470 (40%), Gaps = 69/470 (14%)
Query: 74 FGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKC---DDSFEQFSTLL 130
FG +E G SH++ + I+I+ F C+C + ++
Sbjct: 100 FGEKMEILGISHNLYTYNILINCF-------------------CRCSRLSLALALLGKMM 140
Query: 131 DLPHH-SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXX 189
L + ++ N L+ F + + A + +G + + L+ L
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 190 XXXXXXXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLC 249
+++ G P++ TY G + GLC
Sbjct: 201 EAVALIDRMVQRGCQPDLVTY-------------------------------GAVVNGLC 229
Query: 250 ECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 309
+ G D+A L+ K+ N ++ VI C+ ++AL + EM++ P+V
Sbjct: 230 KRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVI 289
Query: 310 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKL-KGQQLYDKS 366
+Y+ L++ C G +I P++V +++LI + K KL K ++LY++
Sbjct: 290 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEE- 348
Query: 367 LEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHM 426
M++ +I PN + ++ C + EA +LE + N +YN +I+
Sbjct: 349 ------MIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLING 402
Query: 427 ICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF--AKEQSNFEMVERLFTRLVKAGI 484
CK +EL M +R ++ V Y+TLI GF A++ N +MV F ++V G+
Sbjct: 403 FCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV---FKQMVSVGV 459
Query: 485 TFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFC 534
N TY L+ + K KA F + +S + PD +Y +I C
Sbjct: 460 HPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 509
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 109/239 (45%), Gaps = 8/239 (3%)
Query: 202 GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 257
G PN+ TY+ ++SC G A+ +L + NP +VT+ I + G + A
Sbjct: 283 GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA 342
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
KL ++ + N ++++I+GFC + EA ++LE M P+V +YN L+N
Sbjct: 343 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLING 402
Query: 318 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 377
FCK V + + V YT+LI + + D + V+ M+
Sbjct: 403 FCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI----HGFFQARDCDNAQMVFKQMVSVG 458
Query: 378 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMA 436
+ PN + N +L C+ G+ +A+ + E + + Y+YN +I +CK KM
Sbjct: 459 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 1/205 (0%)
Query: 417 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLF 476
Y Y E++ + A+ L M + P ++ +S L+S AK + F++V
Sbjct: 43 SYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAK-MNKFDLVISFG 101
Query: 477 TRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNI 536
++ GI+ N TY LI+ R + A G+M++ PD V+ +L+ FC+
Sbjct: 102 EKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHG 161
Query: 537 REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTY 596
++ A AL +M +G P+ T+T LI G + A L D M ++G PD+VTY
Sbjct: 162 NRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTY 221
Query: 597 TVLIAWYHKHGRIGEKNKLFGEMKA 621
++ K G L +M+A
Sbjct: 222 GAVVNGLCKRGDTDLALNLLNKMEA 246
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 127/313 (40%), Gaps = 81/313 (25%)
Query: 364 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 423
D ++ ++ M Q+ P+ I + +L + +F ++ E GI+ N Y+YN +
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 424 IHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAG 483
I+ C+ S +AL L+ +M+K P +V ++L++GF
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFC-------------------- 159
Query: 484 ITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVAC 543
HG + A +M++ PD V++T LI + + A
Sbjct: 160 --------------HGN--RISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAV 203
Query: 544 ALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDL--------------------------- 576
AL M + GC P+L TY +++G CK DL
Sbjct: 204 ALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSL 263
Query: 577 --------ATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 628
A LF EM+ KG+ P+V+TY+ LI+ +GR + ++L +M
Sbjct: 264 CKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDM--------- 314
Query: 629 GIKKLQDPKLVQF 641
I++ +P LV F
Sbjct: 315 -IERKINPNLVTF 326
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 175 bits (444), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 119/460 (25%), Positives = 214/460 (46%), Gaps = 14/460 (3%)
Query: 167 GLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLA 222
G++ + + N L+K L + G +P+ T+T +M GD+ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 223 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCK--LHPLNSHCFNAVI 280
I ++ G + + V+ + G C+ G V+ A ++++ + P + + FN ++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFP-DQYTFNTLV 302
Query: 281 HGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIK 340
+G C+ G V A+E+++ M PDVY+YN +++ CK G+V
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 341 PSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFR 399
P+ V Y +LI LCK + +++ E+ + I P+ N +++ C R
Sbjct: 363 PNTVTYNTLISTLCK-----ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 400 EALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLI 459
A+ L E+ +G ++++YN +I +C + AL ++ +M V+ Y+TLI
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 460 SGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCL 519
GF K E E +F + G++ N+ TY TLI ++R+ A +MI
Sbjct: 478 DGFCKANKTRE-AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 520 CPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 579
PD+ +Y +L+ FC ++ A + Q M+ GC P++ TY LI G CK +++A++
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 580 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
L ++ KGI Y +I + + E LF EM
Sbjct: 597 LLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/432 (27%), Positives = 194/432 (44%), Gaps = 14/432 (3%)
Query: 202 GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 257
G P++ T+ +++ +R A +L + G P T+ T ++G E G +D A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF-PDVYSYNMLLN 316
++ ++ ++ N ++HGFC+ G V +AL ++EM + F PD Y++N L+N
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303
Query: 317 AFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCK-NKLKGQQLYDKSLEVYNSML 374
CK G V P + Y S+I LCK ++K +++EV + M+
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK------EAVEVLDQMI 357
Query: 375 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 434
PNT+ N ++ C+E Q EA L +GI + ++N +I +C +
Sbjct: 358 TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 435 MALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTL 494
+A+EL M + P Y+ LI + + + ++ +G + TY TL
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCS-KGKLDEALNMLKQMELSGCARSVITYNTL 476
Query: 495 ISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGC 554
I + K +A F EM + + V+Y LI C R + A L +M G
Sbjct: 477 IDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ 536
Query: 555 LPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNK 614
P+ YTY L+ FC+ I A + M G PD+VTY LI+ K GR+ +K
Sbjct: 537 KPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASK 596
Query: 615 LFGEMKANCILL 626
L ++ I L
Sbjct: 597 LLRSIQMKGINL 608
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 176/417 (42%), Gaps = 69/417 (16%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSR------TF------------------------ 305
+ ++ + G+ ++ ++LE+MKSSR TF
Sbjct: 86 YEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMI 145
Query: 306 ------PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCK-NKL 357
PD + YN +LN + IKP + + LI LC+ ++L
Sbjct: 146 DEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQL 205
Query: 358 KGQQLY-----------------------------DKSLEVYNSMLQNAIRPNTIICNHI 388
+ L D +L + M++ + + N I
Sbjct: 206 RPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVI 265
Query: 389 LRVHCREGQFREALTLLEDFHEQ-GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 447
+ C+EG+ +AL +++ Q G +QY++N +++ +CK + K A+E+M ML+
Sbjct: 266 VHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEG 325
Query: 448 VLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKA 507
P V Y+++ISG K E VE + +++ + NT TY TLIS + + +A
Sbjct: 326 YDPDVYTYNSVISGLCKLGEVKEAVE-VLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 508 YCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDG 567
+ + PD ++ +LI C R VA LF+EM GC P+ +TY LID
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444
Query: 568 FCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 624
C +D A + +M+ G V+TY LI + K + E ++F EM+ + +
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGV 501
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 93/193 (48%), Gaps = 5/193 (2%)
Query: 135 HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXX 194
SV+ +N LI F + A ++F + G+ + + N L+ L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 195 XXXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE 250
++ G P+ +TY +++ GDI+ AA+I+ + +G P +VTYGT I GLC+
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 251 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM-KSSRTFPDVY 309
G V+VA KL+R + K L H +N VI G ++ EA+ + EM + + PD
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAV 647
Query: 310 SYNMLLNAFCKKG 322
SY ++ C G
Sbjct: 648 SYRIVFRGLCNGG 660
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 149/379 (39%), Gaps = 48/379 (12%)
Query: 93 IIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHH----SVLVFNVLIKVFA 148
I+ G +V+ I G CK + E L + + + +N LI
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC 376
Query: 149 SNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIH 208
+ +E A ++ + G+ + + N L++ L + G P+
Sbjct: 377 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436
Query: 209 TYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKL 264
TY +++ S G + A +L ++ SG +V+TY T I G C+ A ++ ++
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 265 HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDV 324
NS +N +I G C+ V +A +++++M PD Y+YN LL FC+ GD+
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI 556
Query: 325 XXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTII 384
K+ ++ +M N P+ +
Sbjct: 557 K---------------------------------------KAADIVQAMTSNGCEPDIVT 577
Query: 385 CNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRML 444
++ C+ G+ A LL +GINL ++YN +I + ++ A+ L ML
Sbjct: 578 YGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREML 637
Query: 445 KRN-VLPGVVNYSTLISGF 462
++N P V+Y + G
Sbjct: 638 EQNEAPPDAVSYRIVFRGL 656
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/287 (22%), Positives = 134/287 (46%), Gaps = 11/287 (3%)
Query: 347 TSLILLCKNKLKGQQLYDKSLEVYNSMLQN-AIRPNTIICNHILRVHCREGQFREALTLL 405
TS L+ +L D+ L V + M+ ++P+T N +L + +G +L L+
Sbjct: 118 TSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLV-DGN---SLKLV 173
Query: 406 EDFHEQ----GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISG 461
E H + GI + ++N +I +C+ + A+ ++ M ++P ++T++ G
Sbjct: 174 EISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQG 233
Query: 462 FAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMI-QSCLC 520
+ E+ + + R+ ++V+ G +++ + ++ + + A EM Q
Sbjct: 234 YI-EEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFF 292
Query: 521 PDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQL 580
PD+ ++ L+ C + A + M + G P++YTY +I G CK+ + A ++
Sbjct: 293 PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEV 352
Query: 581 FDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
D+M + P+ VTY LI+ K ++ E +L + + IL D
Sbjct: 353 LDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 204/457 (44%), Gaps = 46/457 (10%)
Query: 206 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
N++T +IM++C + LA +GKI + G P +T+ T I GLC G V A +LV
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
++ H + N +++G C G EA+ ++++M P+ +Y +LN CK
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 241
Query: 322 GDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRP 380
G IK V Y+ +I LCK D + ++N M I
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK-----HGSLDNAFNLFNEMEMKGITT 296
Query: 381 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
N I N ++ C G++ + LL D ++ IN N +++ +I KE + A EL
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 441 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGR 500
M+ R + P + Y++LI GF KE ++ + ++ +V G N +T+ LI+ + +
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKE-NHLDKANQMVDLMVSKGCDPNIRTFNILINGYCK 415
Query: 501 TRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYT 560
+ F +M + D V+Y LI FC + ++NVA LFQEM PN+ T
Sbjct: 416 ANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVT 475
Query: 561 YTCLIDGFC-------------KIDY----------------------IDLATQLFDEMK 585
Y L+DG C KI+ +D A LF +
Sbjct: 476 YKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 535
Query: 586 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
KG+ P V TY ++I K G + E LF +M+ +
Sbjct: 536 LKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 200/429 (46%), Gaps = 13/429 (3%)
Query: 198 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++E G P++ T +++ G A ++ K+ G P VTYG + +C+ G
Sbjct: 184 MVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQ 243
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
+A +L+RK+ + L++ ++ +I G C+ G+++ A + EM+ ++ +YN+
Sbjct: 244 TALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNI 303
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLEVYN 371
L+ FC G +I P++V ++ LI + + KL+ + E++
Sbjct: 304 LIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE------ELHK 357
Query: 372 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 431
M+ I P+TI ++ C+E +A +++ +G + N ++N +I+ CK +
Sbjct: 358 EMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKAN 417
Query: 432 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
LEL +M R V+ V Y+TLI GF E + + LF +V + N TY
Sbjct: 418 RIDDGLELFRKMSLRGVVADTVTYNTLIQGFC-ELGKLNVAKELFQEMVSRKVPPNIVTY 476
Query: 492 TTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR 551
L+ + KA F ++ +S + D Y +I CN +++ A LF +
Sbjct: 477 KILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 552 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
G P + TY +I G CK + A LF +M+ G PD TY +LI + G +
Sbjct: 537 KGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATK 596
Query: 612 KNKLFGEMK 620
KL E+K
Sbjct: 597 SVKLIEELK 605
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 180/385 (46%), Gaps = 7/385 (1%)
Query: 236 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 295
PTV+ + + + D+ L +++ K N + + +I+ FC+ + A
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 296 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCK 354
+ ++ P+ +++ L+N C +G V KP ++ +L+ LC
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLC- 204
Query: 355 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 414
L G++ +++ + + M++ +PN + +L V C+ GQ A+ LL E+ I
Sbjct: 205 --LSGKEA--EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIK 260
Query: 415 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVER 474
L+ Y+ II +CK A L M + + ++ Y+ LI GF ++ +
Sbjct: 261 LDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN-AGRWDDGAK 319
Query: 475 LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFC 534
L ++K I N T++ LI + K +A EMI + PD ++YT+LI FC
Sbjct: 320 LLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFC 379
Query: 535 NIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 594
++ A + M GC PN+ T+ LI+G+CK + ID +LF +M +G+ D V
Sbjct: 380 KENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTV 439
Query: 595 TYTVLIAWYHKHGRIGEKNKLFGEM 619
TY LI + + G++ +LF EM
Sbjct: 440 TYNTLIQGFCELGKLNVAKELFQEM 464
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 201/438 (45%), Gaps = 11/438 (2%)
Query: 198 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++ + PLP + ++ + S L + ++ G + T I C C
Sbjct: 79 MIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRK 138
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
+ +A + K+ + N+ F+ +I+G C G V+EALE+++ M PD+ + N
Sbjct: 139 LCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINT 198
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNS 372
L+N C G +P+ V Y ++ ++CK+ GQ ++E+
Sbjct: 199 LVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS---GQTAL--AMELLRK 253
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
M + I+ + + + I+ C+ G A L + +GI N +YN +I C
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGR 313
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
+L+ M+KR + P VV +S LI F KE E L ++ GI +T TYT
Sbjct: 314 WDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKE-GKLREAEELHKEMIHRGIAPDTITYT 372
Query: 493 TLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI 552
+LI + KA M+ P+ ++ LI +C ++ LF++MS
Sbjct: 373 SLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR 432
Query: 553 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 612
G + + TY LI GFC++ +++A +LF EM + + P++VTY +L+ +G +
Sbjct: 433 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 492
Query: 613 NKLFGEMKANCILLDDGI 630
++F +++ + + LD GI
Sbjct: 493 LEIFEKIEKSKMELDIGI 510
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 159/368 (43%), Gaps = 25/368 (6%)
Query: 78 VETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSV 137
+E G + ++ + I+I F AG + LLRD++ + +V
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR---------------KINPNV 333
Query: 138 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 197
+ F+VLI F L A ++ + G+ + L+
Sbjct: 334 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDL 393
Query: 198 LMETGPLPNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++ G PNI T+ I+++ C R+ E+ K+ G VTY T I+G CE G
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
++VA +L +++ + P N + ++ G C G +ALE+ E+++ S+ D+ YN+
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNS 372
+++ C V +KP + Y +I LCK KG L + L ++
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCK---KGP-LSEAEL-LFRK 568
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
M ++ P+ N ++R H +G +++ L+E+ G +++ + +I M+
Sbjct: 569 MEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRL 628
Query: 433 PKMALELM 440
K L+++
Sbjct: 629 KKSFLDML 636
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 131/525 (24%), Positives = 249/525 (47%), Gaps = 16/525 (3%)
Query: 110 LRDIVGYCKCDDSFEQFSTLL-DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGL 168
L DI+ K DD+ + F ++ P S++ FN L+ A + E + + +G+
Sbjct: 58 LSDII---KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 169 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--AAE 224
+ + + + C +M+ G P+I T + +++ C R+ A
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 225 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 284
++ ++ G P T+ T I GL A LV ++ + + + V++G C
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 285 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 344
+RG ++ AL +L +M+++R +V +N ++++ CK V I+P++V
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294
Query: 345 NYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 404
Y SLI N L + + + ++ML+ I PN + N ++ +EG+ EA L
Sbjct: 295 TYNSLI----NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKL 350
Query: 405 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 464
E+ ++ I+ + +YN +I+ C + A ++ M+ ++ LP + Y+TLI+GF K
Sbjct: 351 HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Query: 465 EQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEV 524
+ + VE LF + + G+ NT TYTT+I + A F +M+ + + D +
Sbjct: 411 CKRVEDGVE-LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIM 469
Query: 525 SYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM 584
+Y+ L+ C+ +++ A +F+ + + N++ Y +I+G CK + A LF +
Sbjct: 470 TYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL 529
Query: 585 KRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDG 629
K PDVVTY +I+ + E + LF +MK + L + G
Sbjct: 530 SIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSG 571
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 110/442 (24%), Positives = 214/442 (48%), Gaps = 13/442 (2%)
Query: 206 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
+++TY+I ++C + LA +L K+ + G P +VT + + G C + A LV
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
++ + ++ F +IHG +EA+ ++++M PD+ +Y ++N CK+
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 322 GDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 380
GD+ +IK ++V + ++I LCK + + +++++ M IRP
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRH-----VEVAVDLFTEMETKGIRP 291
Query: 381 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
N + N ++ C G++ +A LL + E+ IN N ++N +I KE A +L
Sbjct: 292 NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLH 351
Query: 441 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGR 500
M++R++ P + Y+ LI+GF + + +++F +V N +TY TLI+ +
Sbjct: 352 EEMIQRSIDPDTITYNLLINGFCM-HNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCK 410
Query: 501 TRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYT 560
++ F EM Q L + V+YT +I F + + A +F++M ++ T
Sbjct: 411 CKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMT 470
Query: 561 YTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM- 619
Y+ L+ G C +D A +F +++ + ++ Y +I K G++GE LF +
Sbjct: 471 YSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS 530
Query: 620 -KANCILLDDGIKKLQDPKLVQ 640
K + + + I L +L+Q
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQ 552
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 128/526 (24%), Positives = 221/526 (42%), Gaps = 48/526 (9%)
Query: 124 EQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLX 183
EQ TL H + +++ I F S L A V +G E I + + LL
Sbjct: 107 EQMQTLG--ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYC 164
Query: 184 XXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVV 239
++E G P+ T+T ++ A ++ ++ + G P +V
Sbjct: 165 HSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV 224
Query: 240 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 299
TYGT + GLC+ G +D+A L+ K+ N FN +I C+ V A+++ EM
Sbjct: 225 TYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM 284
Query: 300 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 359
++ P+V +YN L+N C G +I P++V + +LI K
Sbjct: 285 ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI---DAFFKE 341
Query: 360 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 419
+L + +++ M+Q +I P+TI N ++ C + EA + + + N +
Sbjct: 342 GKLVEAE-KLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQT 400
Query: 420 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF--AKEQSNFEMVER--- 474
YN +I+ CK + +EL M +R ++ V Y+T+I GF A + + +MV +
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 475 -----------------------------LFTRLVKAGITFNTKTYTTLISIHGRTRKRH 505
+F L K+ + N Y T+I + K
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG 520
Query: 506 KAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLI 565
+A+ F + + PD V+Y +I+ C+ R + A LF++M G LPN TY LI
Sbjct: 521 EAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLI 577
Query: 566 DGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
+ + +L EM+ G D T +++ H GR+ +
Sbjct: 578 RANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLH-DGRLDK 622
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 144/288 (50%), Gaps = 11/288 (3%)
Query: 354 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 413
+N+L D +++++ M+++ P+ + N +L + +F ++L E GI
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 414 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 473
+ + Y+Y+ I+ C+ S +AL ++ +M+K P +V S+L++G+ + + V
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 474 RLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVF 533
L ++V+ G +T T+TTLI K +A +M+Q PD V+Y ++
Sbjct: 175 -LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233
Query: 534 CNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 593
C ++++A L +M N+ + +ID CK ++++A LF EM+ KGI P+V
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293
Query: 594 VTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKLQDPKLVQF 641
VTY LI +GR + ++L M ++K +P +V F
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNM----------LEKKINPNVVTF 331
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/425 (26%), Positives = 208/425 (48%), Gaps = 21/425 (4%)
Query: 205 PNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 260
P++ Y +++ C R+ A +L ++ +P VTY I LC G +D+A K+
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 261 VRKLHCKLHPLNSHC------FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 314
+ +L L+ +C + +I G V+EAL++++EM S PD+++YN +
Sbjct: 216 LNQL------LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTI 269
Query: 315 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML 374
+ CK+G V +P +++Y L+ L Q +++ ++ M
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILL----RALLNQGKWEEGEKLMTKMF 325
Query: 375 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 434
PN + + ++ CR+G+ EA+ LL+ E+G+ + YSY+ +I C+E
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 435 MALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTL 494
+A+E + M+ LP +VNY+T+++ K + +E +F +L + G + N+ +Y T+
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE-IFGKLGEVGCSPNSSSYNTM 444
Query: 495 ISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGC 554
S + + +A EM+ + + PDE++Y ++I+ C ++ A L +M
Sbjct: 445 FSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEF 504
Query: 555 LPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNK 614
P++ TY ++ GFCK I+ A + + M G P+ TYTVLI G E +
Sbjct: 505 HPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAME 564
Query: 615 LFGEM 619
L ++
Sbjct: 565 LANDL 569
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/404 (25%), Positives = 176/404 (43%), Gaps = 41/404 (10%)
Query: 225 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 284
+L + R G NP V+ I+G + A +++ L K + +NA+I+GFC
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILE-KFGQPDVFAYNALINGFC 169
Query: 285 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 344
+ +++A VL+ M+S PD +YN+++ + C +G +
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKL-------------------- 209
Query: 345 NYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 404
D +L+V N +L + +P I ++ EG EAL L
Sbjct: 210 -------------------DLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 250
Query: 405 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 464
+++ +G+ + ++YN II +CKE A E++ + + P V++Y+ L+
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLN 310
Query: 465 EQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEV 524
Q +E E+L T++ N TY+ LI+ R K +A M + L PD
Sbjct: 311 -QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAY 369
Query: 525 SYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM 584
SY LIA FC ++VA + M GCLP++ Y ++ CK D A ++F ++
Sbjct: 370 SYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKL 429
Query: 585 KRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 628
G P+ +Y + + G + EM +N I D+
Sbjct: 430 GEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDE 473
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 178/462 (38%), Gaps = 93/462 (20%)
Query: 93 IIHTFAMAGMHLEVFALLRDIV--GYCK----CDDSFEQFSTLLDLP------------- 133
I H +G ++E LL +V GY C + F TL ++P
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 134 HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXX 193
V +N LI F + ++ A +V ++ + N ++ L
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 194 XXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLC 249
L+ P + TYTI++ G + A +++ ++ G P + TY T IRG+C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 250 ECGYVDVAHKLVRKLHCK------------LHPL-----------------------NSH 274
+ G VD A ++VR L K L L N
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 275 CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKG--DVXXXXXXXX 332
++ +I C+ G + EA+ +L+ MK PD YSY+ L+ AFC++G DV
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 333 XXXXCQIKPSIVNY-TSLILLCKNKLKGQ--QLYDKSLEV--------YNSM-------- 373
C P IVNY T L LCKN Q +++ K EV YN+M
Sbjct: 395 ISDGCL--PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452
Query: 374 ------------LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYN 421
+ N I P+ I N ++ CREG EA LL D + + +YN
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512
Query: 422 EIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 463
++ CK + A+ ++ M+ P Y+ LI G
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIG 554
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 2/201 (0%)
Query: 409 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN 468
H Q + +I H C+ +L L+ M+++ P V+ + LI GF + N
Sbjct: 81 HSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLR-N 139
Query: 469 FEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTA 528
R+ L K G + Y LI+ + + A M PD V+Y
Sbjct: 140 IPKAVRVMEILEKFGQP-DVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNI 198
Query: 529 LIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKG 588
+I C+ ++++A + ++ C P + TYT LI+ +D A +L DEM +G
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258
Query: 589 IFPDVVTYTVLIAWYHKHGRI 609
+ PD+ TY +I K G +
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMV 279
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 214/431 (49%), Gaps = 21/431 (4%)
Query: 202 GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 257
G NI+T IM++C A +LGK+ + G P T+ T I+GL G V A
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
LV ++ + +N++++G C+ G + AL++L +M+ DV++Y+ ++++
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 318 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 377
C+ G + IK S+V Y SL+ + K + D +L + M+
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV---RGLCKAGKWNDGAL-LLKDMVSRE 293
Query: 378 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 437
I PN I N +L V +EG+ +EA L ++ +GI+ N +YN ++ C ++ A
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 438 ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL------FTRLVKAGITFNTKTY 491
++ M++ P +V +++LI G+ MV+R+ F + K G+ N TY
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYC-------MVKRVDDGMKVFRNISKRGLVANAVTY 406
Query: 492 TTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR 551
+ L+ ++ K A F EM+ + PD ++Y L+ C+ ++ A +F+++ +
Sbjct: 407 SILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQK 466
Query: 552 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
+ YT +I+G CK ++ A LF + KG+ P+V+TYTV+I+ K G + E
Sbjct: 467 SKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSE 526
Query: 612 KNKLFGEMKAN 622
N L +M+ +
Sbjct: 527 ANILLRKMEED 537
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 116/492 (23%), Positives = 216/492 (43%), Gaps = 23/492 (4%)
Query: 124 EQFSTLLDLPH--------HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSC 175
+QF+ +LD H++ N++I F A+ V +G E +
Sbjct: 102 KQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTF 161
Query: 176 NFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYR 231
N L+K L ++E G P++ TY +++ GD LA ++L K+
Sbjct: 162 NTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEE 221
Query: 232 SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 291
V TY T I LC G +D A L +++ K + +N+++ G C+ G N+
Sbjct: 222 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWND 281
Query: 292 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL 351
+L++M S P+V ++N+LL+ F K+G + I P+I+ Y +L
Sbjct: 282 GALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL-- 339
Query: 352 LCKNKLKGQQLYDKSLEVYNS---MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 408
+ G + ++ E N M++N P+ + +++ +C + + + + +
Sbjct: 340 -----MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 409 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN 468
++G+ N +Y+ ++ C+ K+A EL M+ VLP V+ Y L+ G +
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC-DNGK 453
Query: 469 FEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTA 528
E +F L K+ + YTT+I + K A+ F + + P+ ++YT
Sbjct: 454 LEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTV 513
Query: 529 LIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKG 588
+I+ C ++ A L ++M G PN TY LI + + + +L +EMK G
Sbjct: 514 MISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCG 573
Query: 589 IFPDVVTYTVLI 600
D + ++I
Sbjct: 574 FSADASSIKMVI 585
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 199/427 (46%), Gaps = 44/427 (10%)
Query: 198 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++ + PLP++ ++ S L + ++ +G + T I C C
Sbjct: 79 MIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCK 138
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
A+ ++ K+ + ++ FN +I G G V+EA+ +++ M + PDV +YN
Sbjct: 139 TCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNS 198
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
++N C+ GD TSL +L++ M
Sbjct: 199 IVNGICRSGD-----------------------TSL----------------ALDLLRKM 219
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
+ ++ + + I+ CR+G A++L ++ +GI + +YN ++ +CK
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTT 493
L+ M+ R ++P V+ ++ L+ F KE + L+ ++ GI+ N TY T
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKE-GKLQEANELYKEMITRGISPNIITYNT 338
Query: 494 LISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIG 553
L+ + + +A M+++ PD V++T+LI +C ++ ++ +F+ +S+ G
Sbjct: 339 LMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRG 398
Query: 554 CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKN 613
+ N TY+ L+ GFC+ I LA +LF EM G+ PDV+TY +L+ +G++ +
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458
Query: 614 KLFGEMK 620
++F +++
Sbjct: 459 EIFEDLQ 465
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 164/355 (46%), Gaps = 11/355 (3%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
F+ + N L+ ++++ + ++Y+ N+++N FC+
Sbjct: 91 FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLE---VYNSMLQNAIRPNTIICNHILRVH 392
+P + +LI KG L K E + + M++N +P+ + N I+
Sbjct: 151 KLGYEPDTTTFNTLI-------KGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGI 203
Query: 393 CREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGV 452
CR G AL LL E+ + + ++Y+ II +C++ A+ L M + + V
Sbjct: 204 CRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSV 263
Query: 453 VNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFG 512
V Y++L+ G K + L +V I N T+ L+ + + K +A +
Sbjct: 264 VTYNSLVRGLCK-AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYK 322
Query: 513 EMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 572
EMI + P+ ++Y L+ +C ++ A + M R C P++ T+T LI G+C +
Sbjct: 323 EMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVK 382
Query: 573 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
+D ++F + ++G+ + VTY++L+ + + G+I +LF EM ++ +L D
Sbjct: 383 RVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 151/385 (39%), Gaps = 85/385 (22%)
Query: 78 VETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSV 137
+ET G SV + ++ AG + LL+D+V S E +P+ V
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV-------SREI------VPN--V 298
Query: 138 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 197
+ FNVL+ VF L+ A++++
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELY-----------------------------------KE 323
Query: 198 LMETGPLPNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++ G PNI TY +M C RL A +L + R+ +P +VT+ + I+G C
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
VD K+ R + + N+ ++ ++ GFCQ G + A E+ +EM S PDV +Y +
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--------------LLCKNKLKG 359
LL+ C G + ++ IV YT++I L C KG
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKG 503
Query: 360 QQ-------------LYDKSLEVYNSML----QNAIRPNTIICNHILRVHCREGQFREAL 402
+ SL N +L ++ PN N ++R H R+G +
Sbjct: 504 VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASA 563
Query: 403 TLLEDFHEQGINLNQYSYNEIIHMI 427
L+E+ G + + S +I M+
Sbjct: 564 KLIEEMKSCGFSADASSIKMVIDML 588
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 87/189 (46%), Gaps = 1/189 (0%)
Query: 436 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
A+ L M++ LP +V++S S A+ + F +V +L GI N T +I
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTK-QFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 496 SIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCL 555
+ R K AY G++++ PD ++ LI +++ A L M GC
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 556 PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL 615
P++ TY +++G C+ LA L +M+ + + DV TY+ +I + G I L
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 616 FGEMKANCI 624
F EM+ I
Sbjct: 251 FKEMETKGI 259
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 65/157 (41%), Gaps = 5/157 (3%)
Query: 466 QSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVS 525
S F ER F+ + + F + + ++ I K+ A F EMI+S P V
Sbjct: 36 SSFFSSCERDFSSISNGNVCFRERLRSGIVDI-----KKDDAIALFQEMIRSRPLPSLVD 90
Query: 526 YTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 585
++ + ++ N+ +++ G N+YT +I+ FC+ A + ++
Sbjct: 91 FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150
Query: 586 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
+ G PD T+ LI G++ E L M N
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 124/457 (27%), Positives = 206/457 (45%), Gaps = 46/457 (10%)
Query: 206 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
N++T +IM++C + LA +GKI + G P VT+ T I GLC G V A +LV
Sbjct: 106 NLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV 165
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
++ H NA+++G C G V++A+ +++ M + P+ +Y +L CK
Sbjct: 166 DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225
Query: 322 GDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRP 380
G +IK V Y+ +I LCK+ D + ++N M +
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD-----GSLDNAFNLFNEMEIKGFKA 280
Query: 381 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
+ II ++R C G++ + LL D ++ I + +++ +I KE + A EL
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 441 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGR 500
M++R + P V Y++LI GF KE + + + +V G N +T+ LI+ + +
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKE-NQLDKANHMLDLMVSKGCGPNIRTFNILINGYCK 399
Query: 501 TRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYT 560
F +M + D V+Y LI FC + ++ VA LFQEM P++ +
Sbjct: 400 ANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVS 459
Query: 561 YTCLIDGFC-------------KIDY----------------------IDLATQLFDEMK 585
Y L+DG C KI+ +D A LF +
Sbjct: 460 YKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 519
Query: 586 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
KG+ PDV TY ++I K G + E + LF +M+ +
Sbjct: 520 LKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 202/429 (47%), Gaps = 13/429 (3%)
Query: 198 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++E G P + T +++ G + A ++ ++ +G P VTYG ++ +C+ G
Sbjct: 168 MVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQ 227
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
+A +L+RK+ + L++ ++ +I G C+ G+++ A + EM+ D+ Y
Sbjct: 228 TALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLEVYN 371
L+ FC G +I P +V +++LI + + KL+ + E++
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE------ELHK 341
Query: 372 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 431
M+Q I P+T+ ++ C+E Q +A +L+ +G N ++N +I+ CK +
Sbjct: 342 EMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKAN 401
Query: 432 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
LEL +M R V+ V Y+TLI GF E E+ + LF +V + + +Y
Sbjct: 402 LIDDGLELFRKMSLRGVVADTVTYNTLIQGFC-ELGKLEVAKELFQEMVSRRVRPDIVSY 460
Query: 492 TTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR 551
L+ + KA F ++ +S + D Y +I CN +++ A LF +
Sbjct: 461 KILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 552 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
G P++ TY +I G CK + A LF +M+ G P+ TY +LI + G +
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATK 580
Query: 612 KNKLFGEMK 620
KL E+K
Sbjct: 581 SAKLIEEIK 589
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 150/368 (40%), Gaps = 25/368 (6%)
Query: 78 VETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSV 137
+E GF + + +I F AG + LLRD++ D V
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD---------------V 317
Query: 138 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 197
+ F+ LI F L A ++ G+ + L+
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 198 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++ G PNI T+ I+++ I E+ K+ G VTY T I+G CE G
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
++VA +L +++ + + + ++ G C G +ALE+ E+++ S+ D+ YN+
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNS 372
+++ C V +KP + Y +I LCK KG L + L ++
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK---KGS-LSEADL-LFRK 552
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
M ++ PN N ++R H EG ++ L+E+ G +++ + ++ M+
Sbjct: 553 MEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRL 612
Query: 433 PKMALELM 440
K L+++
Sbjct: 613 KKSFLDML 620
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 96/212 (45%), Gaps = 1/212 (0%)
Query: 416 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 475
+ SY E + + A++L M + P ++++S L S A+ + +++V L
Sbjct: 36 GKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTK-QYDLVLDL 94
Query: 476 FTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCN 535
++ GI N T + +I+ R RK A+ G++I+ PD V+++ LI C
Sbjct: 95 CKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCL 154
Query: 536 IREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVT 595
++ A L M +G P L T L++G C + A L D M G P+ VT
Sbjct: 155 EGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVT 214
Query: 596 YTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
Y ++ K G+ +L +M+ I LD
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLD 246
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 166 bits (421), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 122/508 (24%), Positives = 231/508 (45%), Gaps = 12/508 (2%)
Query: 118 KCDDSFEQFSTLL-DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCN 176
K DD+ + F ++ P +V+ FN L A E + ++ G+ I + +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 177 FLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--AAEILGKIYRS 232
++ C +M+ G P+ + +++ C + R+ A E++ ++
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 233 GGNPTVVTYGTYIRGLCECGYVDVAHKLV-RKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 291
G PT++T T + GLC G V A L+ R + P N + V++ C+ G
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQP-NEVTYGPVLNVMCKSGQTAL 246
Query: 292 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL 351
A+E+L +M+ D Y+++++ CK G + K I+ Y +LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI- 305
Query: 352 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 411
+D ++ M++ I PN + + ++ +EG+ REA LL++ ++
Sbjct: 306 ---GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Query: 412 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEM 471
GI N +YN +I CKE+ + A++++ M+ + P ++ ++ LI+G+ K +
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDG 422
Query: 472 VERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIA 531
+E LF + G+ NT TY TL+ ++ K A F EM+ + PD VSY L+
Sbjct: 423 LE-LFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLD 481
Query: 532 VFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFP 591
C+ E+ A +F ++ + ++ Y +I G C +D A LF + KG+
Sbjct: 482 GLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKL 541
Query: 592 DVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
D Y ++I+ + + + + LF +M
Sbjct: 542 DARAYNIMISELCRKDSLSKADILFRKM 569
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 120/494 (24%), Positives = 223/494 (45%), Gaps = 13/494 (2%)
Query: 135 HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXX 194
HS+ +++I F L +A +G E N LL L
Sbjct: 121 HSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALEL 180
Query: 195 XXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE 250
++E G P + T +++ G + A ++ ++ +G P VTYG + +C+
Sbjct: 181 VDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCK 240
Query: 251 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 310
G +A +L+RK+ + L++ ++ +I G C+ G+++ A + EM+ D+ +
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIT 300
Query: 311 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLE 368
YN L+ FC G +I P++V ++ LI + + KL+ ++ +
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR------EADQ 354
Query: 369 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 428
+ M+Q I PNTI N ++ C+E + EA+ +++ +G + + ++N +I+ C
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Query: 429 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNT 488
K + LEL M R V+ V Y+TL+ GF + E+ ++LF +V + +
Sbjct: 415 KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFC-QSGKLEVAKKLFQEMVSRRVRPDI 473
Query: 489 KTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQE 548
+Y L+ + KA FG++ +S + D Y +I CN +++ A LF
Sbjct: 474 VSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCS 533
Query: 549 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 608
+ G + Y +I C+ D + A LF +M +G PD +TY +LI +
Sbjct: 534 LPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDD 593
Query: 609 IGEKNKLFGEMKAN 622
+L EMK++
Sbjct: 594 ATTAAELIEEMKSS 607
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 204/438 (46%), Gaps = 11/438 (2%)
Query: 198 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++++ PLP + + + S L + ++ G ++ T I C C
Sbjct: 79 MIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRK 138
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
+ A + K+ + ++ FN +++G C V+EALE+++ M P + + N
Sbjct: 139 LSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNT 198
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNS 372
L+N C G V +P+ V Y ++ ++CK+ GQ ++E+
Sbjct: 199 LVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKS---GQTAL--AMELLRK 253
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
M + I+ + + + I+ C++G A L + +G + +YN +I C
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGR 313
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
+L+ M+KR + P VV +S LI F KE ++L +++ GI NT TY
Sbjct: 314 WDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKE-GKLREADQLLKEMMQRGIAPNTITYN 372
Query: 493 TLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI 552
+LI + + +A MI PD +++ LI +C ++ LF+EMS
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR 432
Query: 553 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 612
G + N TY L+ GFC+ +++A +LF EM + + PD+V+Y +L+ +G + +
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492
Query: 613 NKLFGEMKANCILLDDGI 630
++FG+++ + + LD GI
Sbjct: 493 LEIFGKIEKSKMELDIGI 510
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 130/553 (23%), Positives = 238/553 (43%), Gaps = 42/553 (7%)
Query: 78 VETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTL---LDLPH 134
+E+ G +HS+ I+I+ F C+C FST+ + L +
Sbjct: 114 MESKGIAHSIYTLSIMINCF-------------------CRCRKLSYAFSTMGKIMKLGY 154
Query: 135 H-SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXX 193
++FN L+ + A ++ +G + + + N L+ L
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 194 XXXXLMETGPLPNIHTY----TIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLC 249
++ETG PN TY +M G LA E+L K+ V Y I GLC
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 250 ECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 309
+ G +D A L ++ K + +N +I GFC G ++ ++L +M + P+V
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 310 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLE 368
++++L+++F K+G + I P+ + Y SLI CK + +++++
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK-----ENRLEEAIQ 389
Query: 369 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 428
+ + M+ P+ + N ++ +C+ + + L L + +G+ N +YN ++ C
Sbjct: 390 MVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFC 449
Query: 429 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNT 488
+ ++A +L M+ R V P +V+Y L+ G + E +F ++ K+ + +
Sbjct: 450 QSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC-DNGELEKALEIFGKIEKSKMELDI 508
Query: 489 KTYTTLISIHG--RTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALF 546
Y +I IHG K A+ F + + D +Y +I+ C ++ A LF
Sbjct: 509 GIY--MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILF 566
Query: 547 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 606
++M+ G P+ TY LI D A +L +EMK G DV T ++I
Sbjct: 567 RKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS- 625
Query: 607 GRIGEKNKLFGEM 619
GE +K F +M
Sbjct: 626 ---GELDKSFLDM 635
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 200/428 (46%), Gaps = 13/428 (3%)
Query: 206 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLC-ECGYVDVAHKL 260
+I+T +IM++C + A +GKI + G P V + T + GLC EC V A +L
Sbjct: 122 SIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC-RVSEALEL 180
Query: 261 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 320
V ++ H N +++G C G V++A+ +++ M + P+ +Y +LN CK
Sbjct: 181 VDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCK 240
Query: 321 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIR 379
G IK V Y+ +I LCK+ D + ++N M +
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD-----GSLDNAFNLFNEMEIKGFK 295
Query: 380 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 439
+ I N ++ C G++ + LL D ++ I+ N +++ +I KE + A +L
Sbjct: 296 ADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL 355
Query: 440 MPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHG 499
+ M++R + P + Y++LI GF KE E ++ + ++ G + T+ LI+ +
Sbjct: 356 LKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQ-MVDLMISKGCDPDIMTFNILINGYC 414
Query: 500 RTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLY 559
+ + F EM + + V+Y L+ FC ++ VA LFQEM P++
Sbjct: 415 KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIV 474
Query: 560 TYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
+Y L+DG C ++ A ++F ++++ + D+ Y ++I ++ + LF +
Sbjct: 475 SYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSL 534
Query: 620 KANCILLD 627
+ LD
Sbjct: 535 PLKGVKLD 542
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/398 (21%), Positives = 153/398 (38%), Gaps = 85/398 (21%)
Query: 78 VETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSV 137
+E GF + + +I F AG + LLRD++ + S +V
Sbjct: 289 MEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIK--------RKISP-------NV 333
Query: 138 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 197
+ F+VLI F L A Q LLK
Sbjct: 334 VTFSVLIDSFVKEGKLREADQ-------------------LLK----------------E 358
Query: 198 LMETGPLPNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
+M+ G PN TY ++ C + RL A +++ + G +P ++T+ I G C+
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
+D +L R++ + N+ +N ++ GFCQ G + A ++ +EM S R PD+ SY +
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--------------LLCKNKLKG 359
LL+ C G++ +++ I Y +I L C LKG
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 360 QQLYDKSLEV-----------------YNSMLQNAIRPNTIICNHILRVHCREGQFREAL 402
+L ++ + + M + P+ + N ++R H + A
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAA 598
Query: 403 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
L+E+ G + + +I+M+ K L+++
Sbjct: 599 ELIEEMKSSGFPADVSTVKMVINMLSSGELDKSFLDML 636
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 201/451 (44%), Gaps = 68/451 (15%)
Query: 199 METGPLP-NIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLC---- 249
ME +P NI+++ I++ C + + GK+ + G P VVT+ T + GLC
Sbjct: 132 MEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191
Query: 250 ------------ECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 297
E G+++ + + L P+ FN +I+G C G V EA ++
Sbjct: 192 ISEALALFGYMVETGFLEAVALFDQMVEIGLTPV-VITFNTLINGLCLEGRVLEAAALVN 250
Query: 298 EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNK 356
+M DV +Y ++N CK GD IKP +V Y+++I LCK+
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310
Query: 357 LKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLN 416
Y +++ ML+ I PN N ++ C G++ +A LL D E+ IN +
Sbjct: 311 HHSDAQY-----LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365
Query: 417 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLF 476
++N +I KE A +L ML R + P V Y+++I GF K + F+ + +F
Sbjct: 366 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK-HNRFDDAKHMF 424
Query: 477 TRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNI 536
+ PD V++ +I V+C
Sbjct: 425 DLMAS---------------------------------------PDVVTFNTIIDVYCRA 445
Query: 537 REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTY 596
+ ++ L +E+SR G + N TY LI GFC++D ++ A LF EM G+ PD +T
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 597 TVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
+L+ + ++ ++ E +LF ++ + I LD
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 128/530 (24%), Positives = 220/530 (41%), Gaps = 51/530 (9%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
++ FN+LIK F L + F +G + + + N LL L
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 196 XXLMETGPLPNIHTYTIMMSCG-------------------DIRLAAEILGKIYRSGGNP 236
++ETG L + + M+ G + AA ++ K+ G +
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 237 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL 296
VVTYGT + G+C+ G A L+ K+ + ++A+I C+ G ++A +
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 297 EEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNK 356
EM P+V++YN +++ FC G +I P ++ + +LI +
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 357 LK---GQQLYDKSLE--------VYNSMLQNAIR----------------PNTIICNHIL 389
K ++L D+ L YNSM+ + P+ + N I+
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTII 439
Query: 390 RVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL 449
V+CR + E + LL + +G+ N +YN +IH C+ A +L M+ V
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 450 PGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYC 509
P + + L+ GF + + E +E LF + + I +T Y +I + K +A+
Sbjct: 500 PDTITCNILLYGFCENEKLEEALE-LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558
Query: 510 RFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 569
F + + PD +Y +I+ FC ++ A LF +M G P+ TY LI G
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 618
Query: 570 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
K ID + +L EM+ G D T ++A GR+ +K F +M
Sbjct: 619 KAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRL---DKSFSDM 664
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 149/342 (43%), Gaps = 29/342 (8%)
Query: 288 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK--KGDVXXXXXXXXXXXXCQIKPSIVN 345
++++A++ + M SR F N ++ F + + DV +I+ +N
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKM-----EIRRIPLN 140
Query: 346 YTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLL 405
S +L K +L SL + + + +P+ + N +L C E + EAL L
Sbjct: 141 IYSFNILIKCFCDCHKL-SFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 406 EDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKE 465
E G A+ L +M++ + P V+ ++TLI+G E
Sbjct: 200 GYMVETGF--------------------LEAVALFDQMVEIGLTPVVITFNTLINGLCLE 239
Query: 466 QSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVS 525
E L ++V G+ + TY T+++ + A +M ++ + PD V
Sbjct: 240 GRVLEAAA-LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVI 298
Query: 526 YTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 585
Y+A+I C + A LF EM G PN++TY C+IDGFC A +L +M
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 586 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
+ I PDV+T+ LI+ K G++ E KL EM CI D
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 400
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 201/451 (44%), Gaps = 68/451 (15%)
Query: 199 METGPLP-NIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLC---- 249
ME +P NI+++ I++ C + + GK+ + G P VVT+ T + GLC
Sbjct: 132 MEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDR 191
Query: 250 ------------ECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 297
E G+++ + + L P+ FN +I+G C G V EA ++
Sbjct: 192 ISEALALFGYMVETGFLEAVALFDQMVEIGLTPV-VITFNTLINGLCLEGRVLEAAALVN 250
Query: 298 EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNK 356
+M DV +Y ++N CK GD IKP +V Y+++I LCK+
Sbjct: 251 KMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDG 310
Query: 357 LKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLN 416
Y +++ ML+ I PN N ++ C G++ +A LL D E+ IN +
Sbjct: 311 HHSDAQY-----LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365
Query: 417 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLF 476
++N +I KE A +L ML R + P V Y+++I GF K + F+ + +F
Sbjct: 366 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCK-HNRFDDAKHMF 424
Query: 477 TRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNI 536
+ PD V++ +I V+C
Sbjct: 425 DLMAS---------------------------------------PDVVTFNTIIDVYCRA 445
Query: 537 REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTY 596
+ ++ L +E+SR G + N TY LI GFC++D ++ A LF EM G+ PD +T
Sbjct: 446 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 505
Query: 597 TVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
+L+ + ++ ++ E +LF ++ + I LD
Sbjct: 506 NILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 122/506 (24%), Positives = 209/506 (41%), Gaps = 47/506 (9%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
++ FN+LIK F L + F +G + + + N LL L
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 196 XXLMETGPLPNIHTYTIMMSCG-------------------DIRLAAEILGKIYRSGGNP 236
++ETG L + + M+ G + AA ++ K+ G +
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 237 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL 296
VVTYGT + G+C+ G A L+ K+ + ++A+I C+ G ++A +
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 297 EEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNK 356
EM P+V++YN +++ FC G +I P ++ + +LI +
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 357 LK---GQQLYDKSLE--------VYNSMLQNAIR----------------PNTIICNHIL 389
K ++L D+ L YNSM+ + P+ + N I+
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTII 439
Query: 390 RVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL 449
V+CR + E + LL + +G+ N +YN +IH C+ A +L M+ V
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 450 PGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYC 509
P + + L+ GF + + E +E LF + + I +T Y +I + K +A+
Sbjct: 500 PDTITCNILLYGFCENEKLEEALE-LFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWD 558
Query: 510 RFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 569
F + + PD +Y +I+ FC ++ A LF +M G P+ TY LI G
Sbjct: 559 LFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCL 618
Query: 570 KIDYIDLATQLFDEMKRKGIFPDVVT 595
K ID + +L EM+ G D T
Sbjct: 619 KAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 149/342 (43%), Gaps = 29/342 (8%)
Query: 288 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK--KGDVXXXXXXXXXXXXCQIKPSIVN 345
++++A++ + M SR F N ++ F + + DV +I+ +N
Sbjct: 86 SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKM-----EIRRIPLN 140
Query: 346 YTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLL 405
S +L K +L SL + + + +P+ + N +L C E + EAL L
Sbjct: 141 IYSFNILIKCFCDCHKL-SFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 406 EDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKE 465
E G A+ L +M++ + P V+ ++TLI+G E
Sbjct: 200 GYMVETGF--------------------LEAVALFDQMVEIGLTPVVITFNTLINGLCLE 239
Query: 466 QSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVS 525
E L ++V G+ + TY T+++ + A +M ++ + PD V
Sbjct: 240 GRVLEAAA-LVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVI 298
Query: 526 YTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 585
Y+A+I C + A LF EM G PN++TY C+IDGFC A +L +M
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 586 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
+ I PDV+T+ LI+ K G++ E KL EM CI D
Sbjct: 359 EREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPD 400
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 125/475 (26%), Positives = 216/475 (45%), Gaps = 14/475 (2%)
Query: 139 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 198
V +++ F+ L A + + +N GL + N +L+ +
Sbjct: 149 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 208
Query: 199 METGPLPNIHTYTIM-MSC---GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 254
G +P+ +Y +M + C G I+ A L + + G P T + LCE G V
Sbjct: 209 SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLV 268
Query: 255 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 314
+ A RK+ N F ++I G C++G++ +A E+LEEM + P+VY++ L
Sbjct: 269 NRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 328
Query: 315 LNAFCKKGDVXXXXXXXXXXXXCQI-KPSIVNYTSLIL-LCK-NKLKGQQLYDKSLEVYN 371
++ CK+G KP++ YTS+I CK +KL ++ +++
Sbjct: 329 IDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEM------LFS 382
Query: 372 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 431
M + + PN ++ HC+ G F A L+ ++G N Y+YN I +CK+S
Sbjct: 383 RMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKS 442
Query: 432 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
A EL+ + + V Y+ LI K Q++ F R+ K G + +
Sbjct: 443 RAPEAYELLNKAFSCGLEADGVTYTILIQEQCK-QNDINQALAFFCRMNKTGFEADMRLN 501
Query: 492 TTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR 551
LI+ R +K ++ F ++ L P + +YT++I+ +C ++++A F M R
Sbjct: 502 NILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKR 561
Query: 552 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 606
GC+P+ +TY LI G CK +D A +L++ M +G+ P VT L Y K
Sbjct: 562 HGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKR 616
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 172/406 (42%), Gaps = 8/406 (1%)
Query: 217 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 276
G + A ++ + G P+ +T + E G ++ A + ++ + +S +
Sbjct: 161 GRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSY 220
Query: 277 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 336
++ G + G + EA L M PD + ++L A C+ G V
Sbjct: 221 KLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMID 280
Query: 337 CQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
KP+++N+TSLI LCK KG ++ E+ M++N +PN ++ C+
Sbjct: 281 LGFKPNLINFTSLIDGLCK---KGS--IKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKR 335
Query: 396 GQFREALTL-LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 454
G +A L L+ N ++Y +I CKE A L RM ++ + P V
Sbjct: 336 GWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNT 395
Query: 455 YSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEM 514
Y+TLI+G K S F L + G N TY I + + +AY +
Sbjct: 396 YTTLINGHCKAGS-FGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKA 454
Query: 515 IQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 574
L D V+YT LI C ++N A A F M++ G ++ LI FC+ +
Sbjct: 455 FSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKM 514
Query: 575 DLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
+ +LF + G+ P TYT +I+ Y K G I K F MK
Sbjct: 515 KESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMK 560
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 160/374 (42%), Gaps = 8/374 (2%)
Query: 245 IRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRT 304
+R E G ++ A +V + + +S N V+ + G + A V +EM
Sbjct: 154 LRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRGV 213
Query: 305 FPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYT-SLILLCKNKLKGQQLY 363
PD SY +++ + G + P T L LC+N L
Sbjct: 214 VPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGL-----V 268
Query: 364 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 423
++++ + M+ +PN I ++ C++G ++A +LE+ G N Y++ +
Sbjct: 269 NRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 328
Query: 424 IHMICKESYPKMALELMPRMLKRNVL-PGVVNYSTLISGFAKEQSNFEMVERLFTRLVKA 482
I +CK + + A L ++++ + P V Y+++I G+ KE E LF+R+ +
Sbjct: 329 IDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKED-KLNRAEMLFSRMKEQ 387
Query: 483 GITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVA 542
G+ N TYTTLI+ H + +AY M P+ +Y A I C A
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEA 447
Query: 543 CALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAW 602
L + G + TYT LI CK + I+ A F M + G D+ +LIA
Sbjct: 448 YELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAA 507
Query: 603 YHKHGRIGEKNKLF 616
+ + ++ E +LF
Sbjct: 508 FCRQKKMKESERLF 521
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 120/484 (24%), Positives = 209/484 (43%), Gaps = 49/484 (10%)
Query: 146 VFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLP 205
V+ SM E F G +R+CN +LK L ++E G +P
Sbjct: 177 VYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMP 236
Query: 206 NIHTYTIMM-SC---GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
+ T+ M+ SC GD+ +I ++ R + VTY I G + G ++ A +
Sbjct: 237 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 296
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
+ + + FN +I G+C++G ++A V +EM ++ +P +YN+ + A C
Sbjct: 297 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF 356
Query: 322 GDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 381
G + D + E+ +SM P+
Sbjct: 357 GRI---------------------------------------DDARELLSSMAA----PD 373
Query: 382 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMP 441
+ N ++ + + G+F EA L +D I+ + +YN +I +C+ + A L
Sbjct: 374 VVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKE 433
Query: 442 RMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRT 501
M + + P V+ Y+TL+ GF K N M ++ +++ GI + YTT R
Sbjct: 434 EMTTQLIFPDVITYTTLVKGFVK-NGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRL 492
Query: 502 RKRHKAYCRFGEMIQSCL-CPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYT 560
KA+ EM+ + PD Y I C + + A +++ R+G +P+ T
Sbjct: 493 GDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVT 552
Query: 561 YTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
YT +I G+ + +A L+DEM RK ++P V+TY VLI + K GR+ + + EMK
Sbjct: 553 YTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMK 612
Query: 621 ANCI 624
+
Sbjct: 613 KRGV 616
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 90/440 (20%), Positives = 168/440 (38%), Gaps = 33/440 (7%)
Query: 63 SLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVG------- 115
S N K+ ++F + GF+ + F +I + G+ + + + +++
Sbjct: 284 SKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTT 343
Query: 116 ------------YCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSA 163
+ + DD+ E S++ V+ +N L+ + A +F
Sbjct: 344 STYNIYICALCDFGRIDDARELLSSM---AAPDVVSYNTLMHGYIKMGKFVEASLLFDDL 400
Query: 164 KNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDI 219
+ + I + N L+ L + P++ TYT ++ G++
Sbjct: 401 RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNL 460
Query: 220 RLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKL-HCKLHPLNSHCFNA 278
+A E+ ++ R G P Y T G G D A +L ++ H + +N
Sbjct: 461 SMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNV 520
Query: 279 VIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ 338
I G C+ G + +A+E ++ PD +Y ++ + + G +
Sbjct: 521 RIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR 580
Query: 339 IKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 398
+ PS++ Y LI + +Q + S E M + +RPN + N +L C+ G
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTE----MKKRGVRPNVMTHNALLYGMCKAGNI 636
Query: 399 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 458
EA L E+GI N+YSY +I C + ++L ML + + P + L
Sbjct: 637 DEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 696
Query: 459 ISGFAK--EQSNFEMVERLF 476
K E E +ERL
Sbjct: 697 FKHLEKDHESREVEFLERLL 716
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 5/268 (1%)
Query: 360 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 419
+ + +K L + M++ P+ CN +L+V +A + E E GI +
Sbjct: 181 KSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVIT 240
Query: 420 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRL 479
+N ++ K + ++ M +RN+ V Y+ LI+GF+K E R +
Sbjct: 241 FNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSK-NGKMEEARRFHGDM 299
Query: 480 VKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREM 539
++G ++ LI + + A+ EM+ + + P +Y I C+ +
Sbjct: 300 RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRI 359
Query: 540 NVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 599
+ A L M+ P++ +Y L+ G+ K+ A+ LFD+++ I P +VTY L
Sbjct: 360 DDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTL 415
Query: 600 IAWYHKHGRIGEKNKLFGEMKANCILLD 627
I + G + +L EM I D
Sbjct: 416 IDGLCESGNLEGAQRLKEEMTTQLIFPD 443
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 162 bits (409), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 110/410 (26%), Positives = 192/410 (46%), Gaps = 11/410 (2%)
Query: 205 PNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 260
PN +Y+I++ G + A + ++ G P+ TY I+ LC+ G +D A L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 261 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 320
++ + N H + +I G C+ G + EA V +M R FP V +YN L+N +CK
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 321 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIR 379
G V KP++ + L+ LC+ G+ K++ + ML N +
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR---VGKPY--KAVHLLKRMLDNGLS 438
Query: 380 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 439
P+ + N ++ CREG A LL + I + ++ II+ CK+ +A
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAF 498
Query: 440 MPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHG 499
+ ML++ + V +TLI G K + + L T LVK I + ++ +
Sbjct: 499 LGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILET-LVKMRILTTPHSLNVILDMLS 557
Query: 500 RTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLY 559
+ K + G++ + L P V+YT L+ ++ + + + M GCLPN+Y
Sbjct: 558 KGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVY 617
Query: 560 TYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
YT +I+G C+ ++ A +L M+ G+ P+ VTYTV++ Y +G++
Sbjct: 618 PYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL 667
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 191/389 (49%), Gaps = 13/389 (3%)
Query: 236 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 295
P V+Y I GLCE G ++ A L ++ K ++ + +I C RG +++A +
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 296 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCK 354
+EM P+V++Y +L++ C+ G + +I PS++ Y +LI CK
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 355 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 414
+ G+ + + E+ M + A +PN N ++ CR G+ +A+ LL+ + G++
Sbjct: 384 D---GRVV--PAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLS 438
Query: 415 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVER 474
+ SYN +I +C+E + A +L+ M ++ P + ++ +I+ F K Q ++
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK-QGKADVASA 497
Query: 475 LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVF- 533
+++ GI+ + T TTLI + K A +++ + S ++ +
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLS 557
Query: 534 --CNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFP 591
C ++E A+ +++++G +P++ TYT L+DG + I + ++ + MK G P
Sbjct: 558 KGCKVKE---ELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLP 614
Query: 592 DVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
+V YT++I + GR+ E KL M+
Sbjct: 615 NVYPYTIIINGLCQFGRVEEAEKLLSAMQ 643
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 191/433 (44%), Gaps = 9/433 (2%)
Query: 140 FNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLM 199
+++LI LE A + G + R+ L+K L ++
Sbjct: 269 YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI 328
Query: 200 ETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 255
G PN+HTYT+++ G I A + K+ + P+V+TY I G C+ G V
Sbjct: 329 PRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVV 388
Query: 256 VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLL 315
A +L+ + + N FN ++ G C+ G +A+ +L+ M + PD+ SYN+L+
Sbjct: 389 PAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLI 448
Query: 316 NAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQ 375
+ C++G + I+P + +T++I N Q D + ML+
Sbjct: 449 DGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII----NAFCKQGKADVASAFLGLMLR 504
Query: 376 NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 435
I + + ++ C+ G+ R+AL +LE + I +S N I+ M+ K K
Sbjct: 505 KGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKE 564
Query: 436 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
L ++ ++ K ++P VV Y+TL+ G + + R+ + +G N YT +I
Sbjct: 565 ELAMLGKINKLGLVPSVVTYTTLVDGLIR-SGDITGSFRILELMKLSGCLPNVYPYTIII 623
Query: 496 SIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCL 555
+ + + +A M S + P+ V+YT ++ + N +++ A + M G
Sbjct: 624 NGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYE 683
Query: 556 PNLYTYTCLIDGF 568
N Y+ L+ GF
Sbjct: 684 LNDRIYSSLLQGF 696
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/360 (22%), Positives = 151/360 (41%), Gaps = 8/360 (2%)
Query: 271 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 330
LN C+++++ + A M++ + Y ++NA CK G
Sbjct: 158 LNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMF 217
Query: 331 XXXXXXCQ-IKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAI-RPNTIICNHI 388
+ S + + L+ C+ G L D +L+V++ M + PN++ + +
Sbjct: 218 MSKILKIGFVLDSHIGTSLLLGFCR----GLNLRD-ALKVFDVMSKEVTCAPNSVSYSIL 272
Query: 389 LRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV 448
+ C G+ EA L + E+G + +Y +I +C A L M+ R
Sbjct: 273 IHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGC 332
Query: 449 LPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAY 508
P V Y+ LI G ++ E + ++VK I + TY LI+ + + + A+
Sbjct: 333 KPNVHTYTVLIDGLCRD-GKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAF 391
Query: 509 CRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGF 568
M + P+ ++ L+ C + + A L + M G P++ +Y LIDG
Sbjct: 392 ELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGL 451
Query: 569 CKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 628
C+ +++ A +L M I PD +T+T +I + K G+ + G M I LD+
Sbjct: 452 CREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDE 511
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 104/226 (46%), Gaps = 6/226 (2%)
Query: 399 REALTLLEDFHEQ----GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 454
+E L L+ F E G LN Y+ ++ + K +A RM + G+++
Sbjct: 138 KEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMID 197
Query: 455 YSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEM 514
Y T+++ K E E ++++K G ++ T+L+ R A F M
Sbjct: 198 YRTIVNALCKNGYT-EAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVM 256
Query: 515 IQSCLC-PDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 573
+ C P+ VSY+ LI C + + A L +M GC P+ TYT LI C
Sbjct: 257 SKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGL 316
Query: 574 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
ID A LFDEM +G P+V TYTVLI + G+I E N + +M
Sbjct: 317 IDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM 362
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 119/297 (40%), Gaps = 30/297 (10%)
Query: 202 GPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 257
G +P++ TYT ++ GDI + IL + SG P V Y I GLC+ G V+ A
Sbjct: 576 GLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEA 635
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
KL+ + N + ++ G+ G ++ ALE + M + Y+ LL
Sbjct: 636 EKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQG 695
Query: 318 F--CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQ 375
F +KG + P +N LI S+++
Sbjct: 696 FVLSQKGIDNSEESTVSDIALRETDPECIN--ELI---------------------SVVE 732
Query: 376 NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 435
+ +C ++ C+EG+ E+ L+++ E+G+ L + + + I+ C +
Sbjct: 733 QLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTK 791
Query: 436 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
+EL+ +LK +P ++ +I G KE E + L G+ + T
Sbjct: 792 CMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSNGVVEKSGVLT 848
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/439 (26%), Positives = 204/439 (46%), Gaps = 50/439 (11%)
Query: 202 GPLPNIHTYTIMMSCG----DIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 257
G +++T+ I+++C + LA ILGK+ + G P VT G+
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGS-------------- 160
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
+++GFC+R V++A+ ++++M PD+ +YN ++++
Sbjct: 161 ---------------------LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDS 199
Query: 318 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 377
CK V I+P++V YT+L+ N L + + + + M++
Sbjct: 200 LCKTKRVNDAFDFFKEIERKGIRPNVVTYTALV----NGLCNSSRWSDAARLLSDMIKKK 255
Query: 378 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 437
I PN I + +L + G+ EA L E+ I+ + +Y+ +I+ +C A
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 438 ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISI 497
++ M+ + L VV+Y+TLI+GF K + E +LF + + G+ NT TY TLI
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAK-RVEDGMKLFREMSQRGLVSNTVTYNTLIQG 374
Query: 498 HGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPN 557
+ KA F +M + PD +Y L+ C+ E+ A +F++M + +
Sbjct: 375 FFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLD 434
Query: 558 LYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF- 616
+ TYT +I G CK ++ A LF + KG+ PD+VTYT +++ G + E L+
Sbjct: 435 IVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYT 494
Query: 617 -----GEMKANCILLDDGI 630
G MK +C L D I
Sbjct: 495 KMKQEGLMKNDCTLSDGDI 513
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 159/333 (47%), Gaps = 9/333 (2%)
Query: 289 VNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTS 348
+N+A+++ +M SR FP + +N LL+A K I+ + +
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 349 LI--LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLE 406
+I C ++ +L + ML+ P+ + ++ CR + +A++L++
Sbjct: 126 VINCFCCCFQVS------LALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 407 DFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ 466
E G + +YN II +CK A + + ++ + P VV Y+ L++G
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC-NS 238
Query: 467 SNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSY 526
S + RL + ++K IT N TY+ L+ + K +A F EM++ + PD V+Y
Sbjct: 239 SRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTY 298
Query: 527 TALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 586
++LI C ++ A +F M GCL ++ +Y LI+GFCK ++ +LF EM +
Sbjct: 299 SSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQ 358
Query: 587 KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
+G+ + VTY LI + + G + + + F +M
Sbjct: 359 RGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 111/490 (22%), Positives = 211/490 (43%), Gaps = 22/490 (4%)
Query: 110 LRDIVGYCKCDDSFEQFSTLL-DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGL 168
LRDI K +D+ + FS ++ P S++ FN L+ + + + +G+
Sbjct: 61 LRDI----KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGI 116
Query: 169 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--AAE 224
+ + N ++ C +++ G P+ T +++ C R+ A
Sbjct: 117 RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 176
Query: 225 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 284
++ K+ G P +V Y I LC+ V+ A +++ K N + A+++G C
Sbjct: 177 LVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 236
Query: 285 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 344
++A +L +M + P+V +Y+ LL+AF K G V I P IV
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 296
Query: 345 NYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 404
Y+SLI N L D++ ++++ M+ + + N ++ C+ + + + L
Sbjct: 297 TYSSLI----NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352
Query: 405 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 464
+ ++G+ N +YN +I + A E +M + P + Y+ L+ G
Sbjct: 353 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLC- 411
Query: 465 EQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEV 524
+ E +F + K + + TYTT+I +T K +A+ F + L PD V
Sbjct: 412 DNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIV 471
Query: 525 SYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM 584
+YT +++ C ++ AL+ +M + G + N T L DG I L+ +L +M
Sbjct: 472 TYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT---LSDG-----DITLSAELIKKM 523
Query: 585 KRKGIFPDVV 594
G P ++
Sbjct: 524 LSCGYAPSLL 533
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 143/276 (51%), Gaps = 2/276 (0%)
Query: 352 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 411
L K +L+ +L D ++++++ M+++ P+ + N +L + ++ ++L +
Sbjct: 56 LSKTRLRDIKLND-AIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVL 114
Query: 412 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEM 471
GI + Y++N +I+ C +AL ++ +MLK P V +L++GF + +
Sbjct: 115 GIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDA 174
Query: 472 VERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIA 531
V L ++V+ G + Y +I +T++ + A+ F E+ + + P+ V+YTAL+
Sbjct: 175 VS-LVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVN 233
Query: 532 VFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFP 591
CN + A L +M + PN+ TY+ L+D F K + A +LF+EM R I P
Sbjct: 234 GLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDP 293
Query: 592 DVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
D+VTY+ LI H RI E N++F M + L D
Sbjct: 294 DIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLAD 329
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 134/561 (23%), Positives = 252/561 (44%), Gaps = 31/561 (5%)
Query: 84 SHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCK-----CDDSFEQFSTLLDL--PHHS 136
S+ + F +IH A + L++ ++ K + S F+ L D+ P S
Sbjct: 72 SNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFS 131
Query: 137 VLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXX 196
+ VF++LI F + E A V ++ + ++C +L L
Sbjct: 132 IGVFSLLIMEFLEMGLFEEALWV---SREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQ 188
Query: 197 XLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECG 252
++ G +P++H Y ++ C G ++L ++ G P V Y YI LC
Sbjct: 189 LMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDN 248
Query: 253 YVDVAHKLVRKLHCKLHPL--NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 310
++ A K+ + K H + N + ++A+I G+C+ G V +A + +E+ + P+V
Sbjct: 249 KMEEAEKMFELM--KKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306
Query: 311 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL-CKNKLKGQQLYDKSLEV 369
+ L++ FCK ++ + P++ Y LI CK+ G L +++ +
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKS---GNML--EAVGL 361
Query: 370 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 429
+ M + P+ ++ C E Q EA L + + I + +YN +IH CK
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK 421
Query: 430 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTK 489
E + AL+L M V P ++ +STLI G+ + + + L+ + GI +
Sbjct: 422 EYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVR-DIKAAMGLYFEMTIKGIVPDVV 480
Query: 490 TYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM 549
TYT LI H + +A + +M+++ + P++ ++ L+ F ++VA +QE
Sbjct: 481 TYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQEN 540
Query: 550 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
++ N +TCLI+G C+ YI A++ F +M+ GI PD+ +Y ++ + + RI
Sbjct: 541 NQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRI 600
Query: 610 GEKNKLFGEMKANCILLDDGI 630
+ M C ++ GI
Sbjct: 601 TDT------MMLQCDMIKTGI 615
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 167/363 (46%), Gaps = 13/363 (3%)
Query: 202 GPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 257
G LPN++TY+ M+ G++R A + +I + P VV +GT + G C+ + A
Sbjct: 264 GVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTA 323
Query: 258 HKL-VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLN 316
L V + + P N + +N +IHG C+ G + EA+ +L EM+S PDV++Y +L+N
Sbjct: 324 RSLFVHMVKFGVDP-NLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
Query: 317 AFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQ 375
C + V +I PS Y SLI CK + +++L++ + M
Sbjct: 383 GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK-----EYNMEQALDLCSEMTA 437
Query: 376 NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 435
+ + PN I + ++ +C + A+ L + +GI + +Y +I KE+ K
Sbjct: 438 SGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKE 497
Query: 436 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
AL L ML+ + P ++ L+ GF KE + + + +N +T LI
Sbjct: 498 ALRLYSDMLEAGIHPNDHTFACLVDGFWKE-GRLSVAIDFYQENNQQRSCWNHVGFTCLI 556
Query: 496 SIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCL 555
+ +A F +M + PD SY +++ + + L +M + G L
Sbjct: 557 EGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGIL 616
Query: 556 PNL 558
PNL
Sbjct: 617 PNL 619
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 135/598 (22%), Positives = 252/598 (42%), Gaps = 48/598 (8%)
Query: 73 KFGSWV-ETHGF--SHSVNYFRIIIHTFAMAGMHLEVFALLRDI-VGYCKCDDSFEQFST 128
KF WV + G H V I H A M+ +L+++ + K F T
Sbjct: 95 KFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMT 154
Query: 129 LLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXX 188
L + + V+++LI+V+ M++ + ++F G + +CN +L +
Sbjct: 155 TYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGED 214
Query: 189 XXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTY 244
+++ P++ T+ I+++ G ++ ++ K+ +SG PT+VTY T
Sbjct: 215 VSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTV 274
Query: 245 IRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRT 304
+ C+ G A +L+ + K + +N +IH C+ + + +L +M+
Sbjct: 275 LHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMI 334
Query: 305 FPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYD 364
P+ +YN L+N F +G V + P+ V + +LI + + +
Sbjct: 335 HPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALI----DGHISEGNFK 390
Query: 365 KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEII 424
++L+++ M + P+ + +L C+ +F A G+ + + +Y +I
Sbjct: 391 EALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMI 450
Query: 425 HMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGI 484
+CK + A+ L+ M K + P +V YS LI+GF K F+ + + R+ + G+
Sbjct: 451 DGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCK-VGRFKTAKEIVCRIYRVGL 509
Query: 485 TFNTKTYTTLIS-------------------IHGRTRKRH------KAYCRFGE------ 513
+ N Y+TLI + G TR + C+ G+
Sbjct: 510 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 569
Query: 514 ----MIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 569
M + P+ VS+ LI + N E A ++F EM+++G P +TY L+ G C
Sbjct: 570 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 629
Query: 570 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
K ++ A + + D V Y L+ K G + + LFGEM IL D
Sbjct: 630 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPD 687
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/434 (21%), Positives = 170/434 (39%), Gaps = 78/434 (17%)
Query: 198 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
+ + G P+I TY+ +++ G + A EI+ +IYR G +P + Y T I C G
Sbjct: 469 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 528
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
+ A ++ + + H + FN ++ C+ G V EA E + M S P+ S++
Sbjct: 529 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 588
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
L+N + G+ K+ V++ M
Sbjct: 589 LINGYGNSGEGL---------------------------------------KAFSVFDEM 609
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
+ P +L+ C+ G REA L+ H ++ YN ++ +CK
Sbjct: 610 TKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNL 669
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTT 493
A+ L M++R++LP Y++LISG ++ ++ LF + +A
Sbjct: 670 AKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKT--VIAILFAKEAEA----------- 716
Query: 494 LISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIG 553
+ + P++V YT + + ++M +G
Sbjct: 717 ----------------------RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLG 754
Query: 554 CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKN 613
P++ T +IDG+ ++ I+ L EM + P++ TY +L+ Y K +
Sbjct: 755 HTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSF 814
Query: 614 KLFGEMKANCILLD 627
L+ + N IL D
Sbjct: 815 LLYRSIILNGILPD 828
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 92/424 (21%), Positives = 179/424 (42%), Gaps = 10/424 (2%)
Query: 198 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
+ G LPN ++ +++ G+ A + ++ + G +PT TYG+ ++GLC+ G+
Sbjct: 574 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 633
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
+ A K ++ LH +++ +N ++ C+ G + +A+ + EM PD Y+Y
Sbjct: 634 LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 693
Query: 314 LLNAFCKKGD-VXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNS 372
L++ C+KG V + P+ V YT + K Q + +
Sbjct: 694 LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFV---DGMFKAGQ-WKAGIYFREQ 749
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
M P+ + N ++ + R G+ + LL + Q N +YN ++H K
Sbjct: 750 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 809
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
+ L ++ +LP + +L+ G E + E+ ++ + G+ + T+
Sbjct: 810 VSTSFLLYRSIILNGILPDKLTCHSLVLGIC-ESNMLEIGLKILKAFICRGVEVDRYTFN 868
Query: 493 TLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI 552
LIS + + A+ M + D+ + A+++V + + EMS+
Sbjct: 869 MLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQ 928
Query: 553 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 612
G P Y LI+G C++ I A + +EM I P V + ++ K G+ E
Sbjct: 929 GISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEA 988
Query: 613 NKLF 616
L
Sbjct: 989 TLLL 992
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 117/565 (20%), Positives = 225/565 (39%), Gaps = 62/565 (10%)
Query: 67 KIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQF 126
K+A ++F + + G + F +I+ + +G L+ F++ F
Sbjct: 563 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSV----------------F 606
Query: 127 STLLDLPHH-SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXX 185
+ + HH + + L+K L A + S V + N LL +
Sbjct: 607 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 666
Query: 186 XXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRLAAEIL-GKIYRSGGN--PTVVT 240
+++ LP+ +TYT ++S C + IL K + GN P V
Sbjct: 667 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVM 726
Query: 241 YGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMK 300
Y ++ G+ + G ++ H + NA+I G+ + G + + ++L EM
Sbjct: 727 YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 786
Query: 301 SSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQ 360
+ P++ +YN+LL+ + K+ DV TS +L
Sbjct: 787 NQNGGPNLTTYNILLHGYSKRKDVS---------------------TSFLL--------- 816
Query: 361 QLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSY 420
Y S++ N I P+ + C+ ++ C L +L+ F +G+ +++Y++
Sbjct: 817 ---------YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 867
Query: 421 NEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLV 480
N +I C A +L+ M + ++S + F+ + +
Sbjct: 868 NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNH-RFQESRMVLHEMS 926
Query: 481 KAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMN 540
K GI+ ++ Y LI+ R A+ EMI +CP V+ +A++ + +
Sbjct: 927 KQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKAD 986
Query: 541 VACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
A L + M ++ +P + ++T L+ CK + A +L M G+ D+V+Y VLI
Sbjct: 987 EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1046
Query: 601 AWYHKHGRIGEKNKLFGEMKANCIL 625
G + +L+ EMK + L
Sbjct: 1047 TGLCAKGDMALAFELYEEMKGDGFL 1071
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/318 (21%), Positives = 118/318 (37%), Gaps = 43/318 (13%)
Query: 205 PNIHTYTIMMSCGDIRLAAEILGKIYRS----GGNPTVVTYGTYIRGLCECGYVDVAHKL 260
PN+ TY I++ R +YRS G P +T + + G+CE +++ K+
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 851
Query: 261 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE-------------------------- 294
++ C+ ++ + FN +I C G +N A +
Sbjct: 852 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 911
Query: 295 ---------VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVN 345
VL EM P+ Y L+N C+ GD+ +I P V
Sbjct: 912 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 971
Query: 346 YTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLL 405
++++ L D++ + ML+ + P ++ + C+ G EAL L
Sbjct: 972 ESAMV----RALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELR 1027
Query: 406 EDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKE 465
G+ L+ SYN +I +C + +A EL M L Y LI G
Sbjct: 1028 VVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLAR 1087
Query: 466 QSNFEMVERLFTRLVKAG 483
++ F + + L+ G
Sbjct: 1088 ETAFSGADIILKDLLARG 1105
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 178/375 (47%), Gaps = 26/375 (6%)
Query: 235 NPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE 294
NPT +G Y+ + + G+ PLN + FN +++ FC+ G +++A +
Sbjct: 219 NPTGTIWGFYME-ILDAGF----------------PLNVYVFNILMNKFCKEGNISDAQK 261
Query: 295 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLC 353
V +E+ P V S+N L+N +CK G++ + +P + Y++LI LC
Sbjct: 262 VFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALC 321
Query: 354 K-NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQG 412
K NK+ G +++ M + + PN +I ++ H R G+ + +G
Sbjct: 322 KENKMDGAH------GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKG 375
Query: 413 INLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV 472
+ + YN +++ CK A ++ M++R + P + Y+TLI GF + + E
Sbjct: 376 LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCR-GGDVETA 434
Query: 473 ERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAV 532
+ + + GI + ++ L+ + + A EM+++ + PD+V+YT ++
Sbjct: 435 LEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDA 494
Query: 533 FCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPD 592
FC + L +EM G +P++ TY L++G CK+ + A L D M G+ PD
Sbjct: 495 FCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPD 554
Query: 593 VVTYTVLIAWYHKHG 607
+TY L+ +H+H
Sbjct: 555 DITYNTLLEGHHRHA 569
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/493 (22%), Positives = 208/493 (42%), Gaps = 55/493 (11%)
Query: 82 GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDL---PHHSVL 138
GF +V + ++ A+ M E +L+ +V + + F +L+++ P L
Sbjct: 113 GFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFL 172
Query: 139 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 198
V + L+ + + A Q F ++ ++ IR C LL + +
Sbjct: 173 V-DALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEI 231
Query: 199 METGPLPNIHTYTIMMS--C--GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 254
++ G N++ + I+M+ C G+I A ++ +I + PTVV++ T I G C+ G +
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL 291
Query: 255 DVAHKLVRKLH------------------CKLHPL-----------------NSHCFNAV 279
D +L ++ CK + + N F +
Sbjct: 292 DEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTL 351
Query: 280 IHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQI 339
IHG + G ++ E ++M S PD+ YN L+N FCK GD+ +
Sbjct: 352 IHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGL 411
Query: 340 KPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFR 399
+P + YT+LI +G + + +LE+ M QN I + + + ++ C+EG+
Sbjct: 412 RPDKITYTTLI---DGFCRGGDV-ETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVI 467
Query: 400 EALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLI 459
+A L + GI + +Y ++ CK+ + +L+ M +P VV Y+ L+
Sbjct: 468 DAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLL 527
Query: 460 SGFAK--EQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQS 517
+G K + N +M L ++ G+ + TY TL+ H R K Y + E+
Sbjct: 528 NGLCKLGQMKNADM---LLDAMLNIGVVPDDITYNTLLEGHHRHANSSKRYIQKPEI--- 581
Query: 518 CLCPDEVSYTALI 530
+ D SY +++
Sbjct: 582 GIVADLASYKSIV 594
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 147/319 (46%), Gaps = 41/319 (12%)
Query: 305 FP-DVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLY 363
FP +VY +N+L+N FCK+G++
Sbjct: 236 FPLNVYVFNILMNKFCKEGNIS-------------------------------------- 257
Query: 364 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 423
+ +V++ + + +++P + N ++ +C+ G E L + + ++Y+ +
Sbjct: 258 -DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSAL 316
Query: 424 IHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAG 483
I+ +CKE+ A L M KR ++P V ++TLI G ++ ++++ + +++ G
Sbjct: 317 INALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR-NGEIDLMKESYQKMLSKG 375
Query: 484 ITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVAC 543
+ + Y TL++ + A MI+ L PD+++YT LI FC ++ A
Sbjct: 376 LQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETAL 435
Query: 544 ALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWY 603
+ +EM + G + ++ L+ G CK + A + EM R GI PD VTYT+++ +
Sbjct: 436 EIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAF 495
Query: 604 HKHGRIGEKNKLFGEMKAN 622
K G KL EM+++
Sbjct: 496 CKKGDAQTGFKLLKEMQSD 514
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 117/259 (45%), Gaps = 1/259 (0%)
Query: 370 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 429
Y +L N + N ++ C+EG +A + ++ ++ + S+N +I+ CK
Sbjct: 228 YMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCK 287
Query: 430 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTK 489
L +M K P V YS LI+ KE + + LF + K G+ N
Sbjct: 288 VGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKE-NKMDGAHGLFDEMCKRGLIPNDV 346
Query: 490 TYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM 549
+TTLI H R + + +M+ L PD V Y L+ FC ++ A + M
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 550 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
R G P+ TYT LIDGFC+ ++ A ++ EM + GI D V ++ L+ K GR+
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466
Query: 610 GEKNKLFGEMKANCILLDD 628
+ + EM I DD
Sbjct: 467 IDAERALREMLRAGIKPDD 485
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 137/333 (41%), Gaps = 27/333 (8%)
Query: 113 IVGYCKCDDSFEQFSTLLDLPHH--------SVLVFNVLIKVFASNSMLEHAHQVFVSAK 164
I GYCK + E F L H V ++ LI + ++ AH +F
Sbjct: 282 INGYCKVGNLDEGFR----LKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMC 337
Query: 165 NVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIR 220
GL + L+ ++ G P+I Y +++ GD+
Sbjct: 338 KRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLV 397
Query: 221 LAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVI 280
A I+ + R G P +TY T I G C G V+ A ++ +++ L+ F+A++
Sbjct: 398 AARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALV 457
Query: 281 HGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIK 340
G C+ G V +A L EM + PD +Y M+++AFCKKGD
Sbjct: 458 CGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV 517
Query: 341 PSIVNYTSLI-LLCK-NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 398
PS+V Y L+ LCK ++K + + ++ML + P+ I N +L H R
Sbjct: 518 PSVVTYNVLLNGLCKLGQMKNADM------LLDAMLNIGVVPDDITYNTLLEGHHRHANS 571
Query: 399 REALTLLEDFHEQGINLNQYSYNEIIHMICKES 431
+ E GI + SY I++ + + S
Sbjct: 572 SKRYIQKP---EIGIVADLASYKSIVNELDRAS 601
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 55/105 (52%)
Query: 526 YTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 585
+ L+ FC ++ A +F E+++ P + ++ LI+G+CK+ +D +L +M+
Sbjct: 243 FNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME 302
Query: 586 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 630
+ PDV TY+ LI K ++ + LF EM ++ +D I
Sbjct: 303 KSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVI 347
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 139/574 (24%), Positives = 241/574 (41%), Gaps = 57/574 (9%)
Query: 121 DSFEQFSTLLDL-----PHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSC 175
D E S LL L P +V+ F LI F ++ A +F + G+E + +
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 176 NFLLKCLXXXXXXXXXXXXXXXLMETGPLPNI----HTYTIMMSCGDIRLAAEILGKIYR 231
+ L+ + G ++ T + + GD+ A+ + ++
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 232 SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 291
G +P VVTY I+GLC+ G + A + ++ + + ++++I GFC+ G +
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 292 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI- 350
+ E+M PDV Y +L++ K+G + I+ ++V + SLI
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 351 LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHE 410
C+ +D++L+V+ M I+P+ ++RV EG+ EAL L +
Sbjct: 505 GWCR-----LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559
Query: 411 QGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL--------------------- 449
G+ + +Y +I CK P + L+L +++RN +
Sbjct: 560 MGLEPDALAYCTLIDAFCKHMKPTIGLQLFD-LMQRNKISADIAVCNVVIHLLFKCHRIE 618
Query: 450 ---------------PGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTL 494
P +V Y+T+I G+ + + ER+F L NT T T L
Sbjct: 619 DASKFFNNLIEGKMEPDIVTYNTMICGYCSLR-RLDEAERIFELLKVTPFGPNTVTLTIL 677
Query: 495 ISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGC 554
I + + A F M + P+ V+Y L+ F ++ + LF+EM G
Sbjct: 678 IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGI 737
Query: 555 LPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNK 614
P++ +Y+ +IDG CK +D AT +F + + PDVV Y +LI Y K GR+ E
Sbjct: 738 SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAAL 797
Query: 615 LFGEMKANCILLDD----GIKKLQDPKLVQFKNV 644
L+ M N + DD + + PK + K V
Sbjct: 798 LYEHMLRNGVKPDDLLQRALSEYNPPKWLMSKGV 831
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/475 (24%), Positives = 206/475 (43%), Gaps = 13/475 (2%)
Query: 151 SMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPN---I 207
M++ A ++FV + +G+ + S +L L L G P+
Sbjct: 160 GMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSA 219
Query: 208 HTYTI--MMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVR-KL 264
H + + + G++ A + + G +V+ ++GL ++VA +L+ L
Sbjct: 220 HGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVL 278
Query: 265 HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDV 324
C P N F +I+GFC+RG ++ A ++ + M+ PD+ +Y+ L++ + K G +
Sbjct: 279 DCGPAP-NVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML 337
Query: 325 XXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTII 384
+K +V ++S I + +K L S+ VY ML I PN +
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDV---YVKSGDLATASV-VYKRMLCQGISPNVVT 393
Query: 385 CNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRML 444
+++ C++G+ EA + ++G+ + +Y+ +I CK + L M+
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 445 KRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKR 504
K P VV Y L+ G +K+ + R +++ I N + +LI R +
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAM-RFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 505 HKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCL 564
+A F M + PD ++T ++ V + A LF M ++G P+ Y L
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTL 572
Query: 565 IDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
ID FCK + QLFD M+R I D+ V+I K RI + +K F +
Sbjct: 573 IDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNL 627
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 108/219 (49%), Gaps = 13/219 (5%)
Query: 426 MICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGIT 485
+ CK K AL+ +++R G+V+ + ++ G + +Q E+ RL + ++ G
Sbjct: 227 LFCKGEVTK-ALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ--IEVASRLLSLVLDCGPA 283
Query: 486 FNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACAL 545
N T+ TLI+ + + +A+ F M Q + PD ++Y+ LI + + + L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 546 FQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHK 605
F + G ++ ++ ID + K + A+ ++ M +GI P+VVTYT+LI +
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 606 HGRIGEKNKLFGEMKANCILLDDGIKKLQDPKLVQFKNV 644
GRI E ++G++ +K+ +P +V + ++
Sbjct: 404 DGRIYEAFGMYGQI----------LKRGMEPSIVTYSSL 432
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 113/449 (25%), Positives = 205/449 (45%), Gaps = 31/449 (6%)
Query: 198 LMETGPLPNIHTYTIMMS--CGD--------IRLAAEILGKIYRSGGNPTVVTYGTYIRG 247
+++ G +P Y I++ CGD + LA + ++ +G + ++ R
Sbjct: 398 MVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRC 457
Query: 248 LCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 307
LC G + A ++R++ + ++ ++ V++ C + A + EEMK D
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 308 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSL 367
VY+Y +++++FCK G + P++V YT+LI LK +++ +
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI---HAYLKAKKV-SYAN 573
Query: 368 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLE------DFHEQGINLNQY--- 418
E++ +ML PN + + ++ HC+ GQ +A + E D + + QY
Sbjct: 574 ELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDN 633
Query: 419 -------SYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEM 471
+Y ++ CK + A +L+ M P + Y LI G K +
Sbjct: 634 SERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCK-VGKLDE 692
Query: 472 VERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIA 531
+ + T + + G TY++LI + + +++ A +M+++ P+ V YT +I
Sbjct: 693 AQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMID 752
Query: 532 VFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFP 591
C + + + A L Q M GC PN+ TYT +IDGF I I+ +L + M KG+ P
Sbjct: 753 GLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAP 812
Query: 592 DVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
+ VTY VLI K+G + + L EMK
Sbjct: 813 NYVTYRVLIDHCCKNGALDVAHNLLEEMK 841
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/408 (25%), Positives = 176/408 (43%), Gaps = 47/408 (11%)
Query: 217 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 276
G +A E LG++ P+ TY I+ + +D A + R++ ++
Sbjct: 214 GSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTL 273
Query: 277 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 336
+ C+ G EAL ++E + PD Y L++ C+
Sbjct: 274 RCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRA 330
Query: 337 CQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREG 396
P++V Y++L+ C NK +QL + V N M+ P+ I N ++ +C G
Sbjct: 331 TSCLPNVVTYSTLLCGCLNK---KQL-GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386
Query: 397 QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYS 456
+SY A +L+ +M+K +PG V Y+
Sbjct: 387 --------------------DHSY---------------AYKLLKKMVKCGHMPGYVVYN 411
Query: 457 TLISGFAKEQSN-----FEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRF 511
LI ++ + ++ E+ ++ ++ AG+ N ++ K KA+
Sbjct: 412 ILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVI 471
Query: 512 GEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKI 571
EMI PD +Y+ ++ CN +M +A LF+EM R G + ++YTYT ++D FCK
Sbjct: 472 REMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKA 531
Query: 572 DYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
I+ A + F+EM+ G P+VVTYT LI Y K ++ N+LF M
Sbjct: 532 GLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 173/402 (43%), Gaps = 19/402 (4%)
Query: 236 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 295
P V Y I GLCE + A + ++ N ++ ++ G + + V
Sbjct: 300 PDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRV 359
Query: 296 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCK 354
L M +P +N L++A+C GD C P V Y LI +C
Sbjct: 360 LNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICG 419
Query: 355 NKLKGQ-QLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 413
+K L D + + Y+ ML + N I + R C G++ +A +++ + QG
Sbjct: 420 DKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGF 479
Query: 414 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 473
+ +Y+++++ +C S ++A L M + ++ V Y+ ++ F K E
Sbjct: 480 IPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCK-AGLIEQAR 538
Query: 474 RLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVF 533
+ F + + G T N TYT LI + + +K A F M+ P+ V+Y+ALI
Sbjct: 539 KWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGH 598
Query: 534 CNIREMNVACALFQEMSRIGCL----------------PNLYTYTCLIDGFCKIDYIDLA 577
C ++ AC +F+ M + PN+ TY L+DGFCK ++ A
Sbjct: 599 CKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEA 658
Query: 578 TQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
+L D M +G P+ + Y LI K G++ E ++ EM
Sbjct: 659 RKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 126/552 (22%), Positives = 233/552 (42%), Gaps = 53/552 (9%)
Query: 67 KIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQF 126
++ R K+ + + G S F ++H + +G H + LL+ +V KC
Sbjct: 352 QLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMV---KCG------ 402
Query: 127 STLLDLPHHSVLVFNVLIKVFASN------SMLEHAHQVFVSAKNVGLELHIRSCNFLLK 180
+P + +V+N+LI + +L+ A + + G+ L+ + + +
Sbjct: 403 ----HMPGY--VVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTR 456
Query: 181 CLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNP 236
CL ++ G +P+ TY+ ++ + + LA + ++ R G
Sbjct: 457 CLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVA 516
Query: 237 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL 296
V TY + C+ G ++ A K ++ N + A+IH + + V+ A E+
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 297 EEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNK 356
E M S P++ +Y+ L++ CK G V CQI +C +K
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQV---------EKACQI---------FERMCGSK 618
Query: 357 -LKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 415
+ +Y K + N+ RPN + +L C+ + EA LL+ +G
Sbjct: 619 DVPDVDMYFKQYD------DNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEP 672
Query: 416 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 475
NQ Y+ +I +CK A E+ M + + YS+LI + K + ++ ++
Sbjct: 673 NQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ-DLASKV 731
Query: 476 FTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLC-PDEVSYTALIAVFC 534
+++++ N YT +I + K +AY + +M++ C P+ V+YTA+I F
Sbjct: 732 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAY-KLMQMMEEKGCQPNVVTYTAMIDGFG 790
Query: 535 NIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 594
I ++ L + M G PN TY LID CK +D+A L +EMK+
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850
Query: 595 TYTVLIAWYHKH 606
Y +I ++K
Sbjct: 851 GYRKVIEGFNKE 862
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 124/534 (23%), Positives = 224/534 (41%), Gaps = 44/534 (8%)
Query: 100 AGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQV 159
AG + + F+++R+++G + F +P S ++ ++ + S +E A +
Sbjct: 461 AGKYEKAFSVIREMIG--------QGF-----IPDTST--YSKVLNYLCNASKMELAFLL 505
Query: 160 FVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIM----MS 215
F K GL + + ++ + E G PN+ TYT + +
Sbjct: 506 FEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLK 565
Query: 216 CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKL----------- 264
+ A E+ + G P +VTY I G C+ G V+ A ++ ++
Sbjct: 566 AKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDM 625
Query: 265 HCKLHPLNSH-----CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 319
+ K + NS + A++ GFC+ V EA ++L+ M P+ Y+ L++ C
Sbjct: 626 YFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLC 685
Query: 320 KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIR 379
K G + ++ Y+SLI K+K Q L K V + ML+N+
Sbjct: 686 KVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDR-YFKVKRQDLASK---VLSKMLENSCA 741
Query: 380 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 439
PN +I ++ C+ G+ EA L++ E+G N +Y +I + LEL
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 801
Query: 440 MPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHG 499
+ RM + V P V Y LI K + ++ L + + +T Y +I G
Sbjct: 802 LERMGSKGVAPNYVTYRVLIDHCCKNGA-LDVAHNLLEEMKQTHWPTHTAGYRKVI--EG 858
Query: 500 RTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLY 559
++ ++ E+ Q P Y LI + + +A L +E++ Y
Sbjct: 859 FNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDY 918
Query: 560 --TYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
TY LI+ C + ++ A QLF EM +KG+ P++ ++ LI ++ +I E
Sbjct: 919 SSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISE 972
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 133/536 (24%), Positives = 212/536 (39%), Gaps = 51/536 (9%)
Query: 122 SFEQFSTLLDL---PHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFL 178
+ E+ L D P S +N LI+ F L+ A + + + L ++R F
Sbjct: 219 ALEELGRLKDFRFRPSRST--YNCLIQAFLKADRLDSASLIH---REMSLA-NLRMDGFT 272
Query: 179 LKCLXXXXXXXXXXXXXXXLMETGP-LPNIHTYTIMMS----CGDIRLAAEILGKIYRSG 233
L+C L+ET +P+ YT ++S A + L ++ +
Sbjct: 273 LRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATS 332
Query: 234 GNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKL----HPLNSHCFNAVIHGFCQRGAV 289
P VVTY T LC C + R L+ + +P + FN+++H +C G
Sbjct: 333 CLPNVVTYSTL---LCGCLNKKQLGRCKRVLNMMMMEGCYP-SPKIFNSLVHAYCTSGDH 388
Query: 290 NEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGD------VXXXXXXXXXXXXCQIKPSI 343
+ A ++L++M P YN+L+ + C D + + +
Sbjct: 389 SYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNK 448
Query: 344 VNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREAL 402
+N +S LC G+ Y+K+ V M+ P+T + +L C + A
Sbjct: 449 INVSSFTRCLCS---AGK--YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAF 503
Query: 403 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 462
L E+ G+ + Y+Y ++ CK + A + M + P VV Y+ LI +
Sbjct: 504 LLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAY 563
Query: 463 AKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPD 522
K + LF ++ G N TY+ LI H + + KA F M S PD
Sbjct: 564 LKAK-KVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD 622
Query: 523 E----------------VSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLID 566
V+Y AL+ FC + A L MS GC PN Y LID
Sbjct: 623 VDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALID 682
Query: 567 GFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
G CK+ +D A ++ EM G + TY+ LI Y K R +K+ +M N
Sbjct: 683 GLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLEN 738
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 143/358 (39%), Gaps = 49/358 (13%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
N ++ C+ G+ + ALE L +K R P +YN L+ AF
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAF----------------- 245
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
LK +L SL ++ M +R + C+
Sbjct: 246 ---------------------LKADRLDSASL-IHREMSLANLRMDGFTLRCFAYSLCKV 283
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
G++REALTL+E + + Y ++I +C+ S + A++ + RM + LP VV Y
Sbjct: 284 GKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTY 340
Query: 456 STLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMI 515
STL+ G ++ +R+ ++ G + K + +L+ + + AY +M+
Sbjct: 341 STLLCGCLNKK-QLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMV 399
Query: 516 QSCLCPDEVSYTALIAVFCNIRE------MNVACALFQEMSRIGCLPNLYTYTCLIDGFC 569
+ P V Y LI C ++ +++A + EM G + N + C
Sbjct: 400 KCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLC 459
Query: 570 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
+ A + EM +G PD TY+ ++ + ++ LF EMK ++ D
Sbjct: 460 SAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/348 (29%), Positives = 170/348 (48%), Gaps = 4/348 (1%)
Query: 277 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 336
+A+I + G V A + E + VY+++ L++A+ + G
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 337 CQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREG 396
++P++V Y ++I C KG + + + ++ M +N ++P+ I N +L V R G
Sbjct: 297 YGLRPNLVTYNAVIDACG---KGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 397 QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYS 456
+ A L ++ + I + +SYN ++ ICK +A E++ +M + ++P VV+YS
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 457 TLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQ 516
T+I GFAK F+ LF + GI + +Y TL+SI+ + + +A EM
Sbjct: 414 TVIDGFAK-AGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 517 SCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDL 576
+ D V+Y AL+ + + + +F EM R LPNL TY+ LIDG+ K
Sbjct: 473 VGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKE 532
Query: 577 ATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 624
A ++F E K G+ DVV Y+ LI K+G +G L EM I
Sbjct: 533 AMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/456 (20%), Positives = 197/456 (43%), Gaps = 24/456 (5%)
Query: 135 HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLK-CLXXXXXXXXXXX 193
++V F+ LI + + + E A VF S K GL ++ + N ++ C
Sbjct: 266 NTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK 325
Query: 194 XXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLC 249
+ G P+ T+ +++ G A + ++ V +Y T + +C
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 250 ECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 309
+ G +D+A +++ ++ K N ++ VI GF + G +EAL + EM+ D
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 310 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEV 369
SYN LL+ + K G IK +V Y +L+ Q YD+ +V
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALL----GGYGKQGKYDEVKKV 501
Query: 370 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 429
+ M + + PN + + ++ + + G ++EA+ + +F G+ + Y+ +I +CK
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Query: 430 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTK 489
A+ L+ M K + P VV Y+++I F + + ++R + F++
Sbjct: 562 NGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSAT----MDRSADYSNGGSLPFSSS 617
Query: 490 TYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM 549
+ L G ++ FG++ E + ++E++ +F++M
Sbjct: 618 ALSALTETEG-----NRVIQLFGQLTT------ESNNRTTKDCEEGMQELSCILEVFRKM 666
Query: 550 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 585
++ PN+ T++ +++ + + + A+ L +E++
Sbjct: 667 HQLEIKPNVVTFSAILNACSRCNSFEDASMLLEELR 702
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 119/266 (44%), Gaps = 2/266 (0%)
Query: 364 DKSLEVYNSMLQNAIRPNTI--ICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYN 421
DK++ Y ++ R N + + ++ R G+ A + E G Y+++
Sbjct: 213 DKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFS 272
Query: 422 EIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVK 481
+I + + A+ + M + + P +V Y+ +I K F+ V + F + +
Sbjct: 273 ALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQR 332
Query: 482 AGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNV 541
G+ + T+ +L+++ R A F EM + D SY L+ C +M++
Sbjct: 333 NGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDL 392
Query: 542 ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 601
A + +M +PN+ +Y+ +IDGF K D A LF EM+ GI D V+Y L++
Sbjct: 393 AFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLS 452
Query: 602 WYHKHGRIGEKNKLFGEMKANCILLD 627
Y K GR E + EM + I D
Sbjct: 453 IYTKVGRSEEALDILREMASVGIKKD 478
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 119/428 (27%), Positives = 202/428 (47%), Gaps = 11/428 (2%)
Query: 202 GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 257
GP PN T+++++ G++ A E K+ G P+V T I+G + + A
Sbjct: 369 GPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEA 428
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
KL + + N N ++ C++G +EA E+L +M+S P+V SYN ++
Sbjct: 429 LKLFDE-SFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLG 487
Query: 318 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 377
C++ ++ +KP+ Y+ LI C Q +LEV N M +
Sbjct: 488 HCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQN----ALEVVNHMTSSN 543
Query: 378 IRPNTIICNHILRVHCREGQFREALTLLEDF-HEQGINLNQYSYNEIIHMICKESYPKMA 436
I N ++ I+ C+ GQ +A LL + E+ + ++ SYN II KE A
Sbjct: 544 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSA 603
Query: 437 LELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLIS 496
+ M + P V+ Y++L++G K + +E + + G+ + Y LI
Sbjct: 604 VAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALE-MRDEMKNKGVKLDIPAYGALID 662
Query: 497 IHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLP 556
+ A F E+++ L P + Y +LI+ F N+ M A L+++M + G
Sbjct: 663 GFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRC 722
Query: 557 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 616
+L TYT LIDG K + LA++L+ EM+ G+ PD + YTV++ K G+ + K+F
Sbjct: 723 DLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMF 782
Query: 617 GEMKANCI 624
EMK N +
Sbjct: 783 EEMKKNNV 790
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 131/520 (25%), Positives = 225/520 (43%), Gaps = 22/520 (4%)
Query: 101 GMHLEVFALLRDIVGYCKCDDSFEQFSTLLDL-----PHHSVLVFNVLIKVFASNSMLEH 155
G+ + V A I G+CK +D L D P + + F+VLI+ F N +E
Sbjct: 334 GISMNVVAATSLITGHCKNNDLVSAL-VLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEK 392
Query: 156 AHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS 215
A + + + +GL + + +++ ETG L N+ ++S
Sbjct: 393 ALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-LANVFVCNTILS 451
Query: 216 C----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPL 271
G A E+L K+ G P VV+Y + G C +D+A + + K
Sbjct: 452 WLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKP 511
Query: 272 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 331
N++ ++ +I G + ALEV+ M SS + Y ++N CK G
Sbjct: 512 NNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELL 571
Query: 332 XXX-XXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 390
++ S ++Y S+I + + D ++ Y M N I PN I ++
Sbjct: 572 ANMIEEKRLCVSCMSYNSII----DGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMN 627
Query: 391 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 450
C+ + +AL + ++ +G+ L+ +Y +I CK S + A L +L+ + P
Sbjct: 628 GLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNP 687
Query: 451 GVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCR 510
Y++LISGF + N L+ +++K G+ + TYTTLI + A
Sbjct: 688 SQPIYNSLISGF-RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASEL 746
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
+ EM L PDE+ YT ++ + +F+EM + PN+ Y +I G +
Sbjct: 747 YTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYR 806
Query: 571 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIG 610
+D A +L DEM KGI PD T+ +L++ G++G
Sbjct: 807 EGNLDEAFRLHDEMLDKGILPDGATFDILVS-----GQVG 841
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/464 (25%), Positives = 210/464 (45%), Gaps = 52/464 (11%)
Query: 222 AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKL-HCKLHPLNSHCFNAVI 280
A E+L + G P + Y ++ C+ + +A+ L+R++ KL + + +VI
Sbjct: 252 ALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVI 311
Query: 281 HGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIK 340
++G +++A+ + +EM S +V + L+ CK D+
Sbjct: 312 LASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPS 371
Query: 341 PSIVNYTSLI--------------------------------LLCKNKLKGQQLYDKSLE 368
P+ V ++ LI + + LKGQ+ ++++L+
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQK-HEEALK 430
Query: 369 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 428
+++ + + N +CN IL C++G+ EA LL +GI N SYN ++ C
Sbjct: 431 LFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHC 489
Query: 429 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK---EQSNFEMVERLFTRLVKAGIT 485
++ +A + +L++ + P YS LI G + EQ+ E+V + + I
Sbjct: 490 RQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV----NHMTSSNIE 545
Query: 486 FNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSC-LCPDEVSYTALIAVFCNIREMNVACA 544
N Y T+I+ + + KA MI+ LC +SY ++I F EM+ A A
Sbjct: 546 VNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVA 605
Query: 545 LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYH 604
++EM G PN+ TYT L++G CK + +D A ++ DEMK KG+ D+ Y LI +
Sbjct: 606 AYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFC 665
Query: 605 KHGRIGEKNKLFGEMKANCILLDDGIKKLQ---DPKLVQFKNVG 645
K + + LF E LL++G+ Q + + F+N+G
Sbjct: 666 KRSNMESASALFSE------LLEEGLNPSQPIYNSLISGFRNLG 703
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 193/435 (44%), Gaps = 54/435 (12%)
Query: 236 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 295
P+ TY + I + G +D A +L ++ +N ++I G C+ + AL +
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 296 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 355
++M+ P+ ++++L+ F K G++ + PS+ + ++I +
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTII---QG 418
Query: 356 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 415
LKGQ+ ++++L++++ + + N +CN IL C++G+ EA LL +GI
Sbjct: 419 WLKGQK-HEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGP 476
Query: 416 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK---EQSNFEMV 472
N SYN ++ C++ +A + +L++ + P YS LI G + EQ+ E+V
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV 536
Query: 473 ERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSC-LCPDEVSYTALIA 531
+ + I N Y T+I+ + + KA MI+ LC +SY ++I
Sbjct: 537 ----NHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIID 592
Query: 532 VFCNIREMNVACALFQEMSRIGCLPNLYTYT----------------------------- 562
F EM+ A A ++EM G PN+ TYT
Sbjct: 593 GFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKL 652
Query: 563 ------CLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 616
LIDGFCK ++ A+ LF E+ +G+ P Y LI+ + G + L+
Sbjct: 653 DIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLY 712
Query: 617 GEMKANCILLDDGIK 631
+M L DG++
Sbjct: 713 KKM------LKDGLR 721
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 143/330 (43%), Gaps = 7/330 (2%)
Query: 291 EALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQI-KPSIVNYTSL 349
EALEVL PD Y++ + A CK D+ ++ PS YTS+
Sbjct: 251 EALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSV 310
Query: 350 ILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFH 409
IL Q D ++ + + ML + I N + ++ HC+ AL L +
Sbjct: 311 ILASVK----QGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKME 366
Query: 410 EQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNF 469
++G + N +++ +I K + ALE +M + P V + T+I G+ K Q +
Sbjct: 367 KEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHE 426
Query: 470 EMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTAL 529
E + +LF + G+ N T++S + K +A +M + P+ VSY +
Sbjct: 427 EAL-KLFDESFETGLA-NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNV 484
Query: 530 IAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 589
+ C + M++A +F + G PN YTY+ LIDG + A ++ + M I
Sbjct: 485 MLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNI 544
Query: 590 FPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
+ V Y +I K G+ + +L M
Sbjct: 545 EVNGVVYQTIINGLCKVGQTSKARELLANM 574
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 148/338 (43%), Gaps = 21/338 (6%)
Query: 310 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKP--SIVNYTSLILLCKNKLKGQQLYDKSL 367
++N LLNA+ K + P VN T L+ +N L ++
Sbjct: 165 AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLT------EAK 218
Query: 368 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
E+Y+ M+ + + + ++R RE + EAL +L E+G + Y+ +
Sbjct: 219 ELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQAC 278
Query: 428 CKESYPKMALELMPRMLKRNV-LPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITF 486
CK MA L+ M ++ + +P Y+++I K Q N + RL ++ GI+
Sbjct: 279 CKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVK-QGNMDDAIRLKDEMLSDGISM 337
Query: 487 NTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALF 546
N T+LI+ H + A F +M + P+ V+++ LI F EM A +
Sbjct: 338 NVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFY 397
Query: 547 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 606
++M +G P+++ +I G+ K + A +LFDE G+ +V +++W K
Sbjct: 398 KKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQ 456
Query: 607 GRIGEKNKLFGEMKANCILLDDGIKKLQDPKLVQFKNV 644
G+ E +L +M++ I P +V + NV
Sbjct: 457 GKTDEATELLSKMESRGI----------GPNVVSYNNV 484
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 110/245 (44%), Gaps = 37/245 (15%)
Query: 412 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEM 471
G +N ++N +++ K+ A++++ +ML+ +V+P + +S + S E
Sbjct: 158 GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEA 217
Query: 472 VERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIA 531
E L++R+V G+ + T L+ R K +A I+ PD + Y+ +
Sbjct: 218 KE-LYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQ 276
Query: 532 VFCNIREMNVACALFQEMSRIG-CLPNLYTY----------------------------- 561
C ++ +A +L +EM C+P+ TY
Sbjct: 277 ACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGIS 336
Query: 562 ------TCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL 615
T LI G CK + + A LFD+M+++G P+ VT++VLI W+ K+G + + +
Sbjct: 337 MNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEF 396
Query: 616 FGEMK 620
+ +M+
Sbjct: 397 YKKME 401
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 189/427 (44%), Gaps = 50/427 (11%)
Query: 206 NIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
+++++TI++ C + A +LGK+ + G P++VT+G+ + G C + A LV
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
+ + N +N +I G C+ G +N ALE+L EM+ DV +YN LL C
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 322 GDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 381
G + + + M++ +I P+
Sbjct: 225 GR---------------------------------------WSDAARMLRDMMKRSINPD 245
Query: 382 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMP 441
+ ++ V ++G EA L ++ + ++ N +YN II+ +C A +
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305
Query: 442 RMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE---RLFTRLVKAGITFNTKTYTTLISIH 498
M + P VV Y+TLISGF K F MV+ +LF R+ G + TY TLI +
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCK----FRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGY 361
Query: 499 GRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNL 558
+ K A F M+ + PD +++ L+ C E+ A F +M +
Sbjct: 362 CQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGI 421
Query: 559 YTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE 618
Y +I G CK D ++ A +LF + +G+ PD TYT++I K+G E ++L
Sbjct: 422 VAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRR 481
Query: 619 MKANCIL 625
MK I+
Sbjct: 482 MKEEGII 488
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/330 (26%), Positives = 144/330 (43%), Gaps = 9/330 (2%)
Query: 282 GFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKP 341
GF +A + EM S+ P + + LL A I
Sbjct: 45 GFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISH 104
Query: 342 SIVNYTSLI-LLCK-NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFR 399
+ ++T LI C+ ++L +L V M++ P+ + +L C +
Sbjct: 105 DLYSFTILIHCFCRCSRLS------FALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIG 158
Query: 400 EALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLI 459
+A +L+ + G N YN +I +CK +ALEL+ M K+ + VV Y+TL+
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 460 SGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCL 519
+G + R+ ++K I + T+T LI + + +A + EMIQS +
Sbjct: 219 TGLCY-SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277
Query: 520 CPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 579
P+ V+Y ++I C + A F M+ GC PN+ TY LI GFCK +D +
Sbjct: 278 DPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMK 337
Query: 580 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
LF M +G D+ TY LI Y + G++
Sbjct: 338 LFQRMSCEGFNADIFTYNTLIHGYCQVGKL 367
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 137/284 (48%), Gaps = 9/284 (3%)
Query: 338 QIKPSIVNYTSLILLCKNKLKGQQL--YDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
Q PSIV++T L+ N + + + + + +E+Y + + + TI+ + CR
Sbjct: 66 QPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG--ISHDLYSFTIL----IHCFCRC 119
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
+ AL++L + G + ++ ++H C + A L+ M+K P VV Y
Sbjct: 120 SRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVY 179
Query: 456 STLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMI 515
+TLI G K + L + K G+ + TY TL++ + + A +M+
Sbjct: 180 NTLIDGLCK-NGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMM 238
Query: 516 QSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 575
+ + PD V++TALI VF ++ A L++EM + PN TY +I+G C +
Sbjct: 239 KRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLY 298
Query: 576 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
A + FD M KG FP+VVTY LI+ + K + E KLF M
Sbjct: 299 DAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/435 (22%), Positives = 174/435 (40%), Gaps = 64/435 (14%)
Query: 74 FGSWVETHGFSHSVNYFRIIIH--------TFAMA--------GMHLEVFALLRDIVGYC 117
F +E +G SH + F I+IH +FA++ G + + G+C
Sbjct: 93 FSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFC 152
Query: 118 KCDDSFEQFSTLLDLPHH----SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIR 173
+ + FS ++ + +V+V+N LI N L A ++ + GL +
Sbjct: 153 LVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVV 212
Query: 174 SCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKI 229
+ N LL L +M+ P++ T+T ++ G++ A E+ ++
Sbjct: 213 TYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272
Query: 230 YRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAV 289
+S +P VTY + I GLC G + A K + K N +N +I GFC+ V
Sbjct: 273 IQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMV 332
Query: 290 NEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSL 349
+E +++ + M D+++YN L++ +C+ G +
Sbjct: 333 DEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRV----------------------- 369
Query: 350 ILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFH 409
+L+++ M+ + P+ I +L C G+ AL +D
Sbjct: 370 ----------------ALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMR 413
Query: 410 EQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNF 469
E + +YN +IH +CK + A EL R+ V P Y+ +I G K
Sbjct: 414 ESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 473
Query: 470 EMVERLFTRLVKAGI 484
E + L R+ + GI
Sbjct: 474 E-ADELIRRMKEEGI 487
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 101/206 (49%), Gaps = 11/206 (5%)
Query: 436 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
A L M+ LP +V+++ L++ A + +E V ++ GI+ + ++T LI
Sbjct: 55 AFALFFEMVHSQPLPSIVDFTRLLTATANLR-RYETVIYFSQKMELYGISHDLYSFTILI 113
Query: 496 SIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCL 555
R + A G+M++ P V++ +L+ FC + + A +L M + G
Sbjct: 114 HCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYE 173
Query: 556 PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL 615
PN+ Y LIDG CK +++A +L +EM++KG+ DVVTY L+ GR + +
Sbjct: 174 PNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAAR- 232
Query: 616 FGEMKANCILLDDGIKKLQDPKLVQF 641
+L D +K+ +P +V F
Sbjct: 233 ---------MLRDMMKRSINPDVVTF 249
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 210/434 (48%), Gaps = 16/434 (3%)
Query: 198 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++++ PLP+I ++ ++S + L + + G + +Y I LC C
Sbjct: 60 MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 119
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
+A +V K+ + + +++I+GFCQ V +A++++ +M+ PDV YN
Sbjct: 120 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 179
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLEVYN 371
+++ CK G V ++ V Y SL+ L C + + + +
Sbjct: 180 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR------WSDAARLMR 233
Query: 372 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 431
M+ I PN I ++ V +EG+F EA+ L E+ + ++ + ++YN +I+ +C
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 432 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
A +++ M+ + LP VV Y+TLI+GF K + E +LF + + G+ +T TY
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT-KLFREMAQRGLVGDTITY 352
Query: 492 TTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR 551
T+I + + + A F M P+ +Y+ L+ C + A LF+ M +
Sbjct: 353 NTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLFENMQK 409
Query: 552 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
++ TY +I G CKI ++ A LF + KG+ PDVV+YT +I+ + + + +
Sbjct: 410 SEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDK 469
Query: 612 KNKLFGEMKANCIL 625
+ L+ +M+ + +L
Sbjct: 470 SDLLYRKMQEDGLL 483
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 155/339 (45%), Gaps = 7/339 (2%)
Query: 285 QRGAVN--EALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPS 342
+R ++N E +++ +M SR P + ++ +L+ K + C I
Sbjct: 44 KRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHD 103
Query: 343 IVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREAL 402
+ +Y +I N L + +L V M++ P+ + + ++ C+ + +A+
Sbjct: 104 LYSYNIVI----NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAI 159
Query: 403 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 462
L+ E G + YN II CK A+EL RM + V V Y++L++G
Sbjct: 160 DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 219
Query: 463 AKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPD 522
+ RL +V I N T+T +I + + K +A + EM + C+ PD
Sbjct: 220 CC-SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 278
Query: 523 EVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 582
+Y +LI C ++ A + M GCLP++ TY LI+GFCK +D T+LF
Sbjct: 279 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 338
Query: 583 EMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 621
EM ++G+ D +TY +I Y + GR ++F M +
Sbjct: 339 EMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS 377
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 174/371 (46%), Gaps = 18/371 (4%)
Query: 264 LHCKL---HPLNSHC-FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 319
L CK+ PL S F+ V+ + + + + M+ D+YSYN+++N C
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 320 KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIR 379
+ +P +V +SLI +G +++D ++++ + M + R
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLI---NGFCQGNRVFD-AIDLVSKMEEMGFR 171
Query: 380 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 439
P+ +I N I+ C+ G +A+ L + G+ + +YN ++ +C A L
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231
Query: 440 MPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLIS--- 496
M M+ R+++P V+ ++ +I F KE F +L+ + + + + TY +LI+
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKE-GKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290
Query: 497 IHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLP 556
+HGR +A M+ PD V+Y LI FC + ++ LF+EM++ G +
Sbjct: 291 MHGRV---DEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVG 347
Query: 557 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 616
+ TY +I G+ + D A ++F M + P++ TY++L+ + R+ + LF
Sbjct: 348 DTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEKALVLF 404
Query: 617 GEMKANCILLD 627
M+ + I LD
Sbjct: 405 ENMQKSEIELD 415
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 188/430 (43%), Gaps = 16/430 (3%)
Query: 133 PHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXX 192
P S++ F+ ++ A + + +F + G+ + S N ++ CL
Sbjct: 65 PLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIAL 124
Query: 193 XXXXXLMETGPLPNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGL 248
+M+ G P++ T + +++ C R+ A +++ K+ G P VV Y T I G
Sbjct: 125 SVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGS 184
Query: 249 CECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDV 308
C+ G V+ A +L ++ ++ +N+++ G C G ++A ++ +M P+V
Sbjct: 185 CKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNV 244
Query: 309 YSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLE 368
++ +++ F K+G + P + Y SLI N L D++ +
Sbjct: 245 ITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLI----NGLCMHGRVDEAKQ 300
Query: 369 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 428
+ + M+ P+ + N ++ C+ + E L + ++G+ + +YN II
Sbjct: 301 MLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYF 360
Query: 429 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNT 488
+ P A E+ RM R P + YS L+ G E LF + K+ I +
Sbjct: 361 QAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNW-RVEKALVLFENMQKSEIELDI 416
Query: 489 KTYTTLISIHG--RTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALF 546
TY I IHG + A+ F + L PD VSYT +I+ FC R+ + + L+
Sbjct: 417 TTYN--IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLY 474
Query: 547 QEMSRIGCLP 556
++M G LP
Sbjct: 475 RKMQEDGLLP 484
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 131/264 (49%), Gaps = 1/264 (0%)
Query: 364 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 423
++ ++++ M+Q+ P+ + + +L + + ++L GI + YSYN +
Sbjct: 51 EEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIV 110
Query: 424 IHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAG 483
I+ +C+ S +AL ++ +M+K P VV S+LI+GF + F+ ++ L +++ + G
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAID-LVSKMEEMG 169
Query: 484 ITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVAC 543
+ Y T+I + + A F M + + D V+Y +L+A C + A
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229
Query: 544 ALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWY 603
L ++M +PN+ T+T +ID F K A +L++EM R+ + PDV TY LI
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289
Query: 604 HKHGRIGEKNKLFGEMKANCILLD 627
HGR+ E ++ M L D
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPD 313
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 120/489 (24%), Positives = 219/489 (44%), Gaps = 11/489 (2%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
V+ N L+ + + L A +V+ + G + S L+K +
Sbjct: 169 DVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLI 228
Query: 196 XXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
G +PNI Y ++ GDI A + ++ G PT+ T+GT I G C+
Sbjct: 229 EGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKE 288
Query: 252 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 311
G + +L+ ++ + ++ N +I + G + E + + ++ PDV +Y
Sbjct: 289 GDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATY 348
Query: 312 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVY 370
N+L+N CK+G + P+ ++Y LI CK+K YD + ++
Sbjct: 349 NILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKE-----YDIASKLL 403
Query: 371 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 430
M + +P+ + ++ G +A+ + ++G++ + YN ++ +CK
Sbjct: 404 LQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKT 463
Query: 431 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKT 490
A L ML RN+LP Y+TLI GF + +F+ ++F+ V+ G+ +
Sbjct: 464 GRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIR-SGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 491 YTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMS 550
+ +I R+ +A M + L PD+ +Y+ +I + ++M A +F+ M
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 551 RIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIG 610
+ C PN+ TYT LI+GFC +A + F EM+ + + P+VVTYT LI K
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTL 642
Query: 611 EKNKLFGEM 619
EK + E+
Sbjct: 643 EKAVYYWEL 651
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 172/388 (44%), Gaps = 7/388 (1%)
Query: 237 TVVTYGT--YIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE 294
+V Y T ++G+C G V+V KL+ K N +N +I G+C+ G + A
Sbjct: 202 SVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYL 261
Query: 295 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 354
V +E+K P + ++ ++N FCK+GD ++ S+ ++I
Sbjct: 262 VFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNII---D 318
Query: 355 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 414
K + D + E ++ N +P+ N ++ C+EG+ A+ L++ ++G+
Sbjct: 319 AKYRHGYKVDPA-ESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLI 377
Query: 415 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVER 474
N SY +I CK +A +L+ +M +R P +V Y LI G + +
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVV-SGHMDDAVN 436
Query: 475 LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFC 534
+ +L+ G++ + Y L+S +T + A F EM+ + PD Y LI F
Sbjct: 437 MKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFI 496
Query: 535 NIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 594
+ + A +F G ++ + +I GFC+ +D A + M + + PD
Sbjct: 497 RSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKF 556
Query: 595 TYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
TY+ +I Y K + K+F M+ N
Sbjct: 557 TYSTIIDGYVKQQDMATAIKIFRYMEKN 584
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/511 (21%), Positives = 210/511 (41%), Gaps = 28/511 (5%)
Query: 113 IVGYCKCDDSFEQFSTLLDLPHHSVL----VFNVLIKVFASNSMLEHAHQVFVSAKNVGL 168
I GYCK D + +L + F +I F + ++ K GL
Sbjct: 247 IGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGL 306
Query: 169 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--C--GDIRLAAE 224
+ + N ++ ++ P++ TY I+++ C G +A
Sbjct: 307 RVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVG 366
Query: 225 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 284
L + + G P ++Y I+ C+ D+A KL+ ++ + + + +IHG
Sbjct: 367 FLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLV 426
Query: 285 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 344
G +++A+ + ++ PD YNML++ CK G I P
Sbjct: 427 VSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAY 486
Query: 345 NYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 404
Y +LI + +D++ +V++ ++ ++ + + N +++ CR G EAL
Sbjct: 487 VYATLI----DGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALAC 542
Query: 405 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 464
+ +E+ + ++++Y+ II K+ A+++ M K P VV Y++LI+GF
Sbjct: 543 MNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCC 602
Query: 465 EQSNFEMVERLFTRLVKAGITFNTKTYTTLI-SIHGRTRKRHKAYCRFGEMIQSCLCPDE 523
Q +F+M E F + + N TYTTLI S+ + KA + M+ + P+E
Sbjct: 603 -QGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNE 661
Query: 524 VSYTALIAVF--------------CNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 569
V++ L+ F N + ++ F M G + Y + C
Sbjct: 662 VTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLC 721
Query: 570 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
+ A D+M +KG PD V++ ++
Sbjct: 722 VHGMVKTACMFQDKMVKKGFSPDPVSFAAIL 752
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/389 (22%), Positives = 165/389 (42%), Gaps = 24/389 (6%)
Query: 200 ETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 255
+ G +PN +Y ++ + +A+++L ++ G P +VTYG I GL G++D
Sbjct: 373 KKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD 432
Query: 256 VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLL 315
A + KL + ++ +N ++ G C+ G A + EM PD Y Y L+
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLI 492
Query: 316 NAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSML 374
+ F + GD +K +V++ ++I C++ + D++L N M
Sbjct: 493 DGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRS-----GMLDEALACMNRMN 547
Query: 375 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 434
+ + P+ + I+ + ++ A+ + + N +Y +I+ C + K
Sbjct: 548 EEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFK 607
Query: 435 MALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV----ERLFT-RLVKAGITFN-- 487
MA E M R+++P VV Y+TLI AKE S E E + T + V +TFN
Sbjct: 608 MAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCL 667
Query: 488 ------TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPD-EVSYTALIAVFCNIREMN 540
+ L G + + F ++S D +Y + + C +
Sbjct: 668 LQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVK 727
Query: 541 VACALFQEMSRIGCLPNLYTYTCLIDGFC 569
AC +M + G P+ ++ ++ GFC
Sbjct: 728 TACMFQDKMVKKGFSPDPVSFAAILHGFC 756
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 159/365 (43%), Gaps = 20/365 (5%)
Query: 271 LNSHCFNAVIHGFCQRGAVNEALEVLEEM-KSSRTFPDVYSYNMLLNAFCKK---GDVXX 326
L + V+H + + G++++A+E+ + + + + PDV + N LL+ K GD
Sbjct: 132 LTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARK 191
Query: 327 XXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQN----AIRPNT 382
C S+ NY++ IL+ KG + +EV +++ PN
Sbjct: 192 VYDEM-----CDRGDSVDNYSTCILV-----KGM-CNEGKVEVGRKLIEGRWGKGCIPNI 240
Query: 383 IICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPR 442
+ N I+ +C+ G A + ++ +G ++ +I+ CKE + L+
Sbjct: 241 VFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSE 300
Query: 443 MLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTR 502
+ +R + V + +I + + E + ++ + TY LI+ +
Sbjct: 301 VKERGLRVSVWFLNNIIDAKYRHGYKVDPAESI-GWIIANDCKPDVATYNILINRLCKEG 359
Query: 503 KRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYT 562
K+ A E + L P+ +SY LI +C +E ++A L +M+ GC P++ TY
Sbjct: 360 KKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYG 419
Query: 563 CLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
LI G ++D A + ++ +G+ PD Y +L++ K GR LF EM
Sbjct: 420 ILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDR 479
Query: 623 CILLD 627
IL D
Sbjct: 480 NILPD 484
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/372 (19%), Positives = 150/372 (40%), Gaps = 25/372 (6%)
Query: 113 IVGYCKCDDSFEQFSTLLDLPHH----SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGL 168
I YCK + LL + ++ + +LI + ++ A + V + G+
Sbjct: 387 IQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGV 446
Query: 169 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLAAE 224
N L+ L +++ LP+ + Y ++ GD A +
Sbjct: 447 SPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARK 506
Query: 225 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 284
+ G VV + I+G C G +D A + +++ + + ++ +I G+
Sbjct: 507 VFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYV 566
Query: 285 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 344
++ + A+++ M+ ++ P+V +Y L+N FC +GD + P++V
Sbjct: 567 KQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVV 626
Query: 345 NYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR---------- 394
YT+LI ++ K +K++ + M+ N PN + N +L+ +
Sbjct: 627 TYTTLI---RSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEP 683
Query: 395 EGQFREALTLLEDF----HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 450
+G +L +F G + + +YN + +C K A +M+K+ P
Sbjct: 684 DGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSP 743
Query: 451 GVVNYSTLISGF 462
V+++ ++ GF
Sbjct: 744 DPVSFAAILHGF 755
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 112/267 (41%), Gaps = 37/267 (13%)
Query: 355 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 414
++++ ++ K + +S ++ N C+ L++ R F E +L + + +
Sbjct: 72 DRIQDVEIGVKLFDWLSSEKKDEFFSNGFACSSFLKLLARYRIFNEIEDVLGNLRNENVK 131
Query: 415 LNQYSYNEIIHMICKESYPKMALELMPRMLK-RNVLPGVVNYSTLISGFAKEQSNFEMVE 473
L + + ++H + A+E+ +++ + +P V+ ++L+S K +
Sbjct: 132 LTHEALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSR------- 184
Query: 474 RLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVF 533
RL G RK + C G+ + D S L+
Sbjct: 185 RL-----------------------GDARKVYDEMCDRGDSV------DNYSTCILVKGM 215
Query: 534 CNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 593
CN ++ V L + GC+PN+ Y +I G+CK+ I+ A +F E+K KG P +
Sbjct: 216 CNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTL 275
Query: 594 VTYTVLIAWYHKHGRIGEKNKLFGEMK 620
T+ +I + K G ++L E+K
Sbjct: 276 ETFGTMINGFCKEGDFVASDRLLSEVK 302
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 139/608 (22%), Positives = 248/608 (40%), Gaps = 68/608 (11%)
Query: 57 VVRVIKSLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAG---MHLEVFALLRDI 113
V VIK + + F S + GF H+++ +R +I G EV +R+
Sbjct: 10 VTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMREN 69
Query: 114 VGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIR 173
VG H V+ +K + ++ A VF E +
Sbjct: 70 VG-----------------NHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVF 112
Query: 174 SCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIR--LAAEILGKI 229
S N ++ L + + G P+++++TI M C R A +L +
Sbjct: 113 SYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNM 172
Query: 230 YRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAV 289
G VV Y T + G E + ++L K+ L FN ++ C++G V
Sbjct: 173 SSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDV 232
Query: 290 NEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSL 349
E ++L+++ P++++YN+ + C++G++ KP ++ Y +L
Sbjct: 233 KECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNL 292
Query: 350 IL-LCKNKLKGQQLYDKSLEVY-NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 407
I LCKN K Q+ EVY M+ + P++ N ++ +C+ G + A ++ D
Sbjct: 293 IYGLCKNS-KFQEA-----EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD 346
Query: 408 FHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS 467
G +Q++Y +I +C E AL L L + + P V+ Y+TLI G + +
Sbjct: 347 AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGM 406
Query: 468 NFEMVERLFTRLVKAGITFNTKTYTTLIS------------------------------- 496
E + L + + G+ +T+ L++
Sbjct: 407 ILEAAQ-LANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465
Query: 497 --IHGRTR--KRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI 552
IHG + K A M+ + + PD +Y +L+ C + ++ M
Sbjct: 466 ILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Query: 553 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 612
GC PNL+T+ L++ C+ +D A L +EMK K + PD VT+ LI + K+G +
Sbjct: 526 GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGA 585
Query: 613 NKLFGEMK 620
LF +M+
Sbjct: 586 YTLFRKME 593
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 185/404 (45%), Gaps = 14/404 (3%)
Query: 198 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++ G P+ +TY +++ G ++LA I+G +G P TY + I GLC G
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE 371
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
+ A L + K N +N +I G +G + EA ++ EM P+V ++N+
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNI 431
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
L+N CK G V P I + LI +LK + +LE+ + M
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLK----MENALEILDVM 487
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
L N + P+ N +L C+ +F + + + E+G N +++N ++ +C+
Sbjct: 488 LDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKL 547
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKA-GITFNTKTYT 492
AL L+ M ++V P V + TLI GF K + + LF ++ +A ++ +T TY
Sbjct: 548 DEALGLLEEMKNKSVNPDAVTFGTLIDGFCK-NGDLDGAYTLFRKMEEAYKVSSSTPTYN 606
Query: 493 TLISIHGRTRKRHKAYCR--FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMS 550
I IH T K + F EM+ CL PD +Y ++ FC +N+ EM
Sbjct: 607 --IIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMM 664
Query: 551 RIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 594
G +P+L T +I+ C D + A + M +KG+ P+ V
Sbjct: 665 ENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 115/263 (43%), Gaps = 1/263 (0%)
Query: 365 KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEII 424
+++ V+ M P N I+ V G F +A + ++GI + YS+ +
Sbjct: 94 EAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRM 153
Query: 425 HMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGI 484
CK S P AL L+ M + VV Y T++ GF +E E E LF +++ +G+
Sbjct: 154 KSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE-LFGKMLASGV 212
Query: 485 TFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACA 544
+ T+ L+ + + + ++I+ + P+ +Y I C E++ A
Sbjct: 213 SLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVR 272
Query: 545 LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYH 604
+ + G P++ TY LI G CK A +M +G+ PD TY LIA Y
Sbjct: 273 MVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYC 332
Query: 605 KHGRIGEKNKLFGEMKANCILLD 627
K G + ++ G+ N + D
Sbjct: 333 KGGMVQLAERIVGDAVFNGFVPD 355
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%)
Query: 491 YTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMS 550
Y + +GR K +A F M P SY A+++V + + A ++ M
Sbjct: 79 YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMR 138
Query: 551 RIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIG 610
G P++Y++T + FCK A +L + M +G +VV Y ++ +++
Sbjct: 139 DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKA 198
Query: 611 EKNKLFGEMKANCILL 626
E +LFG+M A+ + L
Sbjct: 199 EGYELFGKMLASGVSL 214
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 155 bits (392), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 131/536 (24%), Positives = 227/536 (42%), Gaps = 57/536 (10%)
Query: 90 FRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFAS 149
F ++ + A + + L +V +C S + F+++L NV+I
Sbjct: 115 FIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVL----------NVIINEGLY 164
Query: 150 NSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHT 209
+ LE V S N+ + + S N ++K L + E LP+ +T
Sbjct: 165 HRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYT 224
Query: 210 YTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH 265
Y +M C + R+ A +L ++ G +P+ V Y I GLC+ G + KLV +
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284
Query: 266 CKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVX 325
K N +N +IHG C +G +++A+ +LE M SS+ P+ +Y L+N K
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVK----- 339
Query: 326 XXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIIC 385
Q+ ++ + +SM + N I
Sbjct: 340 ----------------------------------QRRATDAVRLLSSMEERGYHLNQHIY 365
Query: 386 NHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLK 445
+ ++ +EG+ EA++L E+G N Y+ ++ +C+E P A E++ RM+
Sbjct: 366 SVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIA 425
Query: 446 RNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRH 505
LP YS+L+ GF K E V+ ++ + K G + N Y+ LI +
Sbjct: 426 SGCLPNAYTYSSLMKGFFKTGLCEEAVQ-VWKEMDKTGCSRNKFCYSVLIDGLCGVGRVK 484
Query: 506 KAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM---SRIGCLPNLYTYT 562
+A + +M+ + PD V+Y+++I C I M+ A L+ EM P++ TY
Sbjct: 485 EAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYN 544
Query: 563 CLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE 618
L+DG C I A L + M +G PDV+T + + +K + F E
Sbjct: 545 ILLDGLCMQKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLE 600
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 182/386 (47%), Gaps = 42/386 (10%)
Query: 235 NPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE 294
+P +++ I+ LC+ +VD A ++ R + + + + + ++ G C+ ++EA+
Sbjct: 184 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 243
Query: 295 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLC 353
+L+EM+S P YN+L++ CKKGD+ P+ V Y +LI LC
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 303
Query: 354 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 413
LKG+ DK++ + M+ + PN + ++ ++ + +A+ LL E+G
Sbjct: 304 ---LKGK--LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 414 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 473
+LNQ+ Y+ +I + KE + A+ L +M ++ P +V YS L+ G +E E E
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 474 RLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVF 533
+ R++ +G N TY++L+ K + + G LC + V
Sbjct: 419 -ILNRMIASGCLPNAYTYSSLM----------KGFFKTG------LCEEAVQ-------- 453
Query: 534 CNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 593
+++EM + GC N + Y+ LIDG C + + A ++ +M GI PD
Sbjct: 454 -----------VWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDT 502
Query: 594 VTYTVLIAWYHKHGRIGEKNKLFGEM 619
V Y+ +I G + KL+ EM
Sbjct: 503 VAYSSIIKGLCGIGSMDAALKLYHEM 528
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 167/382 (43%), Gaps = 46/382 (12%)
Query: 238 VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 297
++ G Y RGL YV + ++ + P N FN VI C+ V+ A+EV
Sbjct: 158 IINEGLYHRGLEFYDYV-----VNSNMNMNISP-NGLSFNLVIKALCKLRFVDRAIEVFR 211
Query: 298 EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKL 357
M + PD Y+Y L++ CK
Sbjct: 212 GMPERKCLPDGYTYCTLMDGLCK------------------------------------- 234
Query: 358 KGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQ 417
++ D+++ + + M P+ +I N ++ C++G L+++ +G N+
Sbjct: 235 --EERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNE 292
Query: 418 YSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFT 477
+YN +IH +C + A+ L+ RM+ +P V Y TLI+G K++ + V RL +
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAV-RLLS 351
Query: 478 RLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIR 537
+ + G N Y+ LIS + K +A + +M + P+ V Y+ L+ C
Sbjct: 352 SMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREG 411
Query: 538 EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYT 597
+ N A + M GCLPN YTY+ L+ GF K + A Q++ EM + G + Y+
Sbjct: 412 KPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYS 471
Query: 598 VLIAWYHKHGRIGEKNKLFGEM 619
VLI GR+ E ++ +M
Sbjct: 472 VLIDGLCGVGRVKEAMMVWSKM 493
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 124/287 (43%), Gaps = 9/287 (3%)
Query: 340 KPSIVNYTSLILLCKNKLKGQQLYDKSLEVY----NSMLQNAIRPNTIICNHILRVHCRE 395
K S+ ++ S++ N + + LY + LE Y NS + I PN + N +++ C+
Sbjct: 145 KRSVKSFNSVL----NVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKL 200
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
A+ + E+ + Y+Y ++ +CKE A+ L+ M P V Y
Sbjct: 201 RFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIY 260
Query: 456 STLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMI 515
+ LI G K + + V +L + G N TY TLI K KA M+
Sbjct: 261 NVLIDGLCK-KGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319
Query: 516 QSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 575
S P++V+Y LI R A L M G N + Y+ LI G K +
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379
Query: 576 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
A L+ +M KG P++V Y+VL+ + G+ E ++ M A+
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIAS 426
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 99/247 (40%), Gaps = 5/247 (2%)
Query: 386 NHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLK 445
+ ++ + G F LL + + + S+ + K P A++L RM+
Sbjct: 81 SSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVD 140
Query: 446 R-NVLPGVVNYSTLISGFAKE---QSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRT 501
V +++++++ E E + + + I+ N ++ +I +
Sbjct: 141 EFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKL 200
Query: 502 RKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTY 561
R +A F M + PD +Y L+ C ++ A L EM GC P+ Y
Sbjct: 201 RFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIY 260
Query: 562 TCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM-K 620
LIDG CK + T+L D M KG P+ VTY LI G++ + L M
Sbjct: 261 NVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVS 320
Query: 621 ANCILLD 627
+ CI D
Sbjct: 321 SKCIPND 327
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 144/607 (23%), Positives = 240/607 (39%), Gaps = 79/607 (13%)
Query: 82 GFSHSVNYFRIIIHTFAMAGMHLEVFALLR---------DIVGYCKCDDSFEQFSTLLDL 132
G+ +V+ F +I FA G +LL DIV Y C DSF + + D+
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKV-DM 256
Query: 133 P---HHSV---------LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIR-SCNFLL 179
H + + + +I V + L+ A ++F LE + R C +
Sbjct: 257 AWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH-----LEKNRRVPCTYAY 311
Query: 180 KCLXXXXXXXXXXXXXXXLME----TGPLPNIHTYTIMMSC----GDIRLAAEILGKIYR 231
+ L+E G +P++ Y +++C G + A ++ ++ +
Sbjct: 312 NTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK 371
Query: 232 SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH-CKLHPLNSHCFNAVIHGFCQRGAVN 290
P + TY I LC G +D A +L + L P N N ++ C+ ++
Sbjct: 372 DAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFP-NVRTVNIMVDRLCKSQKLD 429
Query: 291 EALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI 350
EA + EEM PD ++ L++ K G V + + + YTSLI
Sbjct: 430 EACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLI 489
Query: 351 LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED--- 407
KN + D ++Y M+ P+ + N + + G+ + + E+
Sbjct: 490 ---KNFFNHGRKEDGH-KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKA 545
Query: 408 --------------------------------FHEQGINLNQYSYNEIIHMICKESYPKM 435
EQG L+ +YN +I CK
Sbjct: 546 RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 605
Query: 436 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
A +L+ M + P VV Y ++I G AK + LF I N Y++LI
Sbjct: 606 AYQLLEEMKTKGFEPTVVTYGSVIDGLAK-IDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664
Query: 496 SIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCL 555
G+ + +AY E++Q L P+ ++ +L+ E+N A FQ M + C
Sbjct: 665 DGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCT 724
Query: 556 PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL 615
PN TY LI+G CK+ + A + EM+++G+ P ++YT +I+ K G I E L
Sbjct: 725 PNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGAL 784
Query: 616 FGEMKAN 622
F KAN
Sbjct: 785 FDRFKAN 791
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 125/537 (23%), Positives = 222/537 (41%), Gaps = 24/537 (4%)
Query: 113 IVGYCKCDDSFEQFSTLLDLPHH-----SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVG 167
I+GY F++ +LL+ SV+ +N ++ ++ A +VF K
Sbjct: 315 IMGYGSAG-KFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA 373
Query: 168 LELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--AA 223
++ + N L+ L + + G PN+ T IM+ C +L A
Sbjct: 374 AP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC 432
Query: 224 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 283
+ ++ P +T+ + I GL + G VD A+K+ K+ NS + ++I F
Sbjct: 433 AMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 492
Query: 284 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 343
G + ++ ++M + PD+ N ++ K G+ + P
Sbjct: 493 FNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDA 552
Query: 344 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 403
+Y+ LI + L +++ E++ SM + +T N ++ C+ G+ +A
Sbjct: 553 RSYSILI----HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 404 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 463
LLE+ +G +Y +I + K A L + + VV YS+LI GF
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 464 KEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDE 523
K + + L++ G+T N T+ +L+ + + ++A F M + P++
Sbjct: 669 K-VGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQ 727
Query: 524 VSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE 583
V+Y LI C +R+ N A +QEM + G P+ +YT +I G K I A LFD
Sbjct: 728 VTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDR 787
Query: 584 MKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK--------ANCILLDDGIKK 632
K G PD Y +I R + LF E + C++L D + K
Sbjct: 788 FKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHK 844
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 179/413 (43%), Gaps = 10/413 (2%)
Query: 217 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 276
G + +A + +I +G P VTY + I LC+ +D A ++ L ++ +
Sbjct: 252 GKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAY 311
Query: 277 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 336
N +I G+ G +EA +LE ++ + P V +YN +L K G V
Sbjct: 312 NTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKK 371
Query: 337 CQIKPSIVNYTSLI-LLCK-NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 394
P++ Y LI +LC+ KL D + E+ +SM + + PN N ++ C+
Sbjct: 372 -DAAPNLSTYNILIDMLCRAGKL------DTAFELRDSMQKAGLFPNVRTVNIMVDRLCK 424
Query: 395 EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 454
+ EA + E+ + ++ ++ +I + K A ++ +ML + +
Sbjct: 425 SQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIV 484
Query: 455 YSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEM 514
Y++LI F E +++ ++ + + + T + + + K F E+
Sbjct: 485 YTSLIKNFFNHGRK-EDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEI 543
Query: 515 IQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 574
PD SY+ LI N LF M GC+ + Y +IDGFCK +
Sbjct: 544 KARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKV 603
Query: 575 DLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
+ A QL +EMK KG P VVTY +I K R+ E LF E K+ I L+
Sbjct: 604 NKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELN 656
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 187/429 (43%), Gaps = 45/429 (10%)
Query: 236 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 295
P Y T I + D+ L +++ + H F +I GF + G V+ AL +
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSL 225
Query: 296 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCK 354
L+EMKSS D+ YN+ +++F K G V +KP V YTS+I +LCK
Sbjct: 226 LDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCK 285
Query: 355 -NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 413
N+L D+++E++ + +N P T N ++ + G+F EA +LLE +G
Sbjct: 286 ANRL------DEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 414 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 473
+ +YN I+ + K AL++ M K++ P + Y+ LI + +
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCR-AGKLDTAF 397
Query: 474 RLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVF 533
L + KAG+ N +T ++ +++K +A F EM PDE+++ +LI
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Query: 534 CNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGF--------------------CKID- 572
+ ++ A ++++M C N YT LI F C D
Sbjct: 458 GKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDL 517
Query: 573 -----YIDL---------ATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE 618
Y+D +F+E+K + PD +Y++LI K G E +LF
Sbjct: 518 QLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYS 577
Query: 619 MKANCILLD 627
MK +LD
Sbjct: 578 MKEQGCVLD 586
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 154/357 (43%), Gaps = 13/357 (3%)
Query: 228 KIYRSGGN----PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 283
KIY+ N P + TY+ + + G + + ++ + ++ ++ +IHG
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Query: 284 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 343
+ G NE E+ MK D +YN++++ FCK G V +P++
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 344 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 403
V Y S+I + L D++ ++ I N +I + ++ + G+ EA
Sbjct: 623 VTYGSVI----DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYL 678
Query: 404 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 463
+LE+ ++G+ N Y++N ++ + K AL M + P V Y LI+G
Sbjct: 679 ILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLC 738
Query: 464 KEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDE 523
K + F + + K G+ +T +YTT+IS + +A F + PD
Sbjct: 739 KVRK-FNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDS 797
Query: 524 VSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTC--LIDGFCKIDYIDLAT 578
Y A+I N A +LF+E R G LP ++ TC L+D K D ++ A
Sbjct: 798 ACYNAMIEGLSNGNRAMDAFSLFEETRRRG-LP-IHNKTCVVLLDTLHKNDCLEQAA 852
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 17/284 (5%)
Query: 345 NYTSLILL---CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREA 401
+Y SL+L+ C+N +D ++ M P+ C ++ + + RE
Sbjct: 100 SYNSLLLVMARCRN-------FDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREG 152
Query: 402 LTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISG 461
+++ + +Y +I ++ M L L +M + P V ++TLI G
Sbjct: 153 YDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRG 212
Query: 462 FAKE---QSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSC 518
FAKE S +++ + + + A I Y I G+ K A+ F E+ +
Sbjct: 213 FAKEGRVDSALSLLDEMKSSSLDADIVL----YNVCIDSFGKVGKVDMAWKFFHEIEANG 268
Query: 519 LCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLAT 578
L PDEV+YT++I V C ++ A +F+ + + +P Y Y +I G+ D A
Sbjct: 269 LKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAY 328
Query: 579 QLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
L + + KG P V+ Y ++ K G++ E K+F EMK +
Sbjct: 329 SLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKD 372
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%)
Query: 468 NFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYT 527
NF+ ++++ + AG + T ++ + K + Y M + P +YT
Sbjct: 113 NFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYT 172
Query: 528 ALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK 587
LI F + ++ LFQ+M +G P ++ +T LI GF K +D A L DEMK
Sbjct: 173 TLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSS 232
Query: 588 GIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 628
+ D+V Y V I + K G++ K F E++AN + D+
Sbjct: 233 SLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 103/250 (41%), Gaps = 11/250 (4%)
Query: 386 NHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLK 445
N +L V R F +L + G + + E++ K + + +++ M K
Sbjct: 102 NSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRK 161
Query: 446 RNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRH 505
P Y+TLI F+ + +M+ LF ++ + G +TTLI + +
Sbjct: 162 FKFRPAFSAYTTLIGAFSAVNHS-DMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVD 220
Query: 506 KAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLI 565
A EM S L D V Y I F + ++++A F E+ G P+ TYT +I
Sbjct: 221 SALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMI 280
Query: 566 DGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA---- 621
CK + +D A ++F+ +++ P Y +I Y G+ E L +A
Sbjct: 281 GVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSI 340
Query: 622 ------NCIL 625
NCIL
Sbjct: 341 PSVIAYNCIL 350
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/490 (24%), Positives = 203/490 (41%), Gaps = 13/490 (2%)
Query: 140 FNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLM 199
++VLI LE A + V ++G+ L + + L+ L ++
Sbjct: 280 YDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMV 339
Query: 200 ETGPLPNIHTYT------IMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
G NI Y +M G + A + + SG P Y + I G C
Sbjct: 340 SHGI--NIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKN 397
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
V ++L+ ++ + ++ + + V+ G C G ++ A +++EM +S P+V Y
Sbjct: 398 VRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTT 457
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
L+ F + I P I Y SLI+ L + D++ M
Sbjct: 458 LIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLII----GLSKAKRMDEARSFLVEM 513
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
++N ++PN + + +F A +++ E G+ N+ +I+ CK+
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTT 493
A M+ + +L Y+ L++G K + E +F + GI + +Y
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFK-NDKVDDAEEIFREMRGKGIAPDVFSYGV 632
Query: 494 LISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIG 553
LI+ + KA F EM++ L P+ + Y L+ FC E+ A L EMS G
Sbjct: 633 LINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG 692
Query: 554 CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKN 613
PN TY +IDG+CK + A +LFDEMK KG+ PD YT L+ + +
Sbjct: 693 LHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAI 752
Query: 614 KLFGEMKANC 623
+FG K C
Sbjct: 753 TIFGTNKKGC 762
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 103/355 (29%), Positives = 164/355 (46%), Gaps = 5/355 (1%)
Query: 273 SHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXX 332
+ + ++I G+C+ V + E+L EMK Y+Y ++ C GD+
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441
Query: 333 XXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVH 392
+P++V YT+LI K L+ + D ++ V M + I P+ N ++
Sbjct: 442 EMIASGCRPNVVIYTTLI---KTFLQNSRFGD-AMRVLKEMKEQGIAPDIFCYNSLIIGL 497
Query: 393 CREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGV 452
+ + EA + L + E G+ N ++Y I + S A + + M + VLP
Sbjct: 498 SKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNK 557
Query: 453 VNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFG 512
V + LI+ + K+ E + +V GI + KTYT L++ + K A F
Sbjct: 558 VLCTGLINEYCKKGKVIEACSA-YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFR 616
Query: 513 EMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 572
EM + PD SY LI F + M A ++F EM G PN+ Y L+ GFC+
Sbjct: 617 EMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSG 676
Query: 573 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
I+ A +L DEM KG+ P+ VTY +I Y K G + E +LF EMK ++ D
Sbjct: 677 EIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPD 731
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 131/541 (24%), Positives = 224/541 (41%), Gaps = 39/541 (7%)
Query: 113 IVGYCKCDDSFEQFSTLLDLPHHSVLV----FNVLIKVFASNSMLEHAHQVFVSAKNVGL 168
I GYC+ + + + L+++ ++++ + ++K S+ L+ A+ + G
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448
Query: 169 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLAAE 224
++ L+K + E G P+I Y ++ + A
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 225 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKL-HCKLHPLNSHCFNAVIHGF 283
L ++ +G P TYG +I G E A K V+++ C + P C +I+ +
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC-TGLINEY 567
Query: 284 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 343
C++G V EA M D +Y +L+N K V I P +
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 344 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 403
+Y LI N K+ +++ M++ + PN II N +L CR G+ +A
Sbjct: 628 FSYGVLI----NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 404 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 463
LL++ +G++ N +Y II CK A L M + ++P Y+TL+ G
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Query: 464 KEQSNFEMVERLFTRLV--KAGITFNTKTYTTLISI---HGRT--------RKRHKAYCR 510
+ VER T K G +T + LI+ G+T R ++ R
Sbjct: 744 R----LNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDR 799
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
FG+ P++V+Y +I C + A LF +M +P + TYT L++G+ K
Sbjct: 800 FGK-------PNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDK 852
Query: 571 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 630
+ +FDE GI PD + Y+V+I + K G + L +M A +DDG
Sbjct: 853 MGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNA-VDDGC 911
Query: 631 K 631
K
Sbjct: 912 K 912
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 113/508 (22%), Positives = 207/508 (40%), Gaps = 84/508 (16%)
Query: 198 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++ +G +P Y ++ ++R E+L ++ + + TYGT ++G+C G
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
+D A+ +V+++ N + +I F Q +A+ VL+EMK PD++ YN
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
L+ K + +KP+ Y + I ++ + + + + M
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI---SGYIEASE-FASADKYVKEM 548
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
+ + PN ++C ++ +C++G+ EA + +QGI + +Y +++ + K
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTT 493
A E+ M + + P V +Y LI+GF+K N + +F +V+ G+T N Y
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSK-LGNMQKASSIFDEMVEEGLTPNVIIYNM 667
Query: 494 LISIHGRTRKRHKA-------------------------YCRFGEMIQS----------C 518
L+ R+ + KA YC+ G++ ++
Sbjct: 668 LLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKG 727
Query: 519 LCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCL----------------------- 555
L PD YT L+ C + ++ A +F ++ GC
Sbjct: 728 LVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFGKTELKT 786
Query: 556 ----------------PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 599
PN TY +ID CK ++ A +LF +M+ + P V+TYT L
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846
Query: 600 IAWYHKHGRIGEKNKLFGEMKANCILLD 627
+ Y K GR E +F E A I D
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGIEPD 874
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 118/515 (22%), Positives = 214/515 (41%), Gaps = 58/515 (11%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
+V+++ LIK F NS A +V K G+ I N L+ L
Sbjct: 451 NVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFL 510
Query: 196 XXLMETGPLPNIHTYTIMMS--------------------CGDIRLAAEIL--------- 226
++E G PN TY +S CG L ++L
Sbjct: 511 VEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECG--VLPNKVLCTGLINEYC 568
Query: 227 --GKI------YRSGGNPTVV----TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSH 274
GK+ YRS + ++ TY + GL + VD A ++ R++ K +
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVF 628
Query: 275 CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 334
+ +I+GF + G + +A + +EM P+V YNMLL FC+ G++
Sbjct: 629 SYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM 688
Query: 335 XXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 394
+ P+ V Y ++I K L + + +++ M + P++ + ++ CR
Sbjct: 689 SVKGLHPNAVTYCTII---DGYCKSGDLAE-AFRLFDEMKLKGLVPDSFVYTTLVDGCCR 744
Query: 395 EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLK----RNVLP 450
A+T+ +++G + +N +I+ + K ++ E++ R++ R P
Sbjct: 745 LNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKP 803
Query: 451 GVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCR 510
V Y+ +I KE N E + LF ++ A + TYT+L++ + + +R + +
Sbjct: 804 NDVTYNIMIDYLCKE-GNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPV 862
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM-----SRIGCLPNLYTYTCLI 565
F E I + + PD + Y+ +I F A L +M GC ++ T L+
Sbjct: 863 FDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALL 922
Query: 566 DGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
GF K+ +++A ++ + M R PD T LI
Sbjct: 923 SGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 161/402 (40%), Gaps = 53/402 (13%)
Query: 269 HPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFP--DVYS---------------- 310
L+S F A+ C G+ +AL V+E M R +P +V+S
Sbjct: 95 QKLDSFSFLAL--DLCNFGSFEKALSVVERM-IERNWPVAEVWSSIVRCSQEFVGKSDDG 151
Query: 311 --YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKS 366
+ +L + + KG + ++ P + L+ LL N+L D
Sbjct: 152 VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRL------DLF 205
Query: 367 LEVYNSMLQNAIRPNTIICNHILRVHCREG--------------QFREA-------LTLL 405
+VY M++ + + + ++ HCR G +FR A L L
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 406 EDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKE 465
E +G+ +Y+Y+ +I +CK + A L+ M V YS LI G K
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 466 QSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVS 525
+ N + + L +V GI Y I + + KA F MI S L P +
Sbjct: 326 R-NADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384
Query: 526 YTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 585
Y +LI +C + + L EM + + + YTY ++ G C +D A + EM
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444
Query: 586 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
G P+VV YT LI + ++ R G+ ++ EMK I D
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPD 486
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 115/475 (24%), Positives = 212/475 (44%), Gaps = 16/475 (3%)
Query: 132 LPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXX 191
L S ++F++L++ M++ A + F K G +CN +L L
Sbjct: 150 LETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENA 209
Query: 192 XXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRG 247
+ N++T+ IM++ G ++ A LG + G PT+VTY T ++G
Sbjct: 210 WVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQG 269
Query: 248 LCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 307
G ++ A ++ ++ K + +N ++ C G A EVL EMK PD
Sbjct: 270 FSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPD 326
Query: 308 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDK 365
SYN+L+ GD+ + P+ Y +LI L +NK++ ++ +
Sbjct: 327 SVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIR 386
Query: 366 SLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIH 425
+ + I +++ N ++ +C+ G ++A L ++ GI Q++Y +I+
Sbjct: 387 EIR------EKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIY 440
Query: 426 MICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGIT 485
++C+++ + A EL +++ + + P +V +TL+ G N + L + I
Sbjct: 441 VLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA-IGNMDRAFSLLKEMDMMSIN 499
Query: 486 FNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACAL 545
+ TY L+ K +A GEM + + PD +SY LI+ + + A +
Sbjct: 500 PDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMV 559
Query: 546 FQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
EM +G P L TY L+ G K +LA +L EMK +GI P+ ++ +I
Sbjct: 560 RDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/400 (26%), Positives = 172/400 (43%), Gaps = 47/400 (11%)
Query: 265 HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFP------------------ 306
H +L ++ F+ ++ CQ V+EA+E MK +P
Sbjct: 147 HDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRI 206
Query: 307 -----------------DVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSL 349
+VY++N+++N CK+G + IKP+IV Y +L
Sbjct: 207 ENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTL 266
Query: 350 I--LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 407
+ + +++G +L + + M +P+ N IL C EG+ E +L +
Sbjct: 267 VQGFSLRGRIEGARL------IISEMKSKGFQPDMQTYNPILSWMCNEGRASE---VLRE 317
Query: 408 FHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS 467
E G+ + SYN +I +MA M+K+ ++P Y+TLI G E +
Sbjct: 318 MKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFME-N 376
Query: 468 NFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYT 527
E E L + + GI ++ TY LI+ + + KA+ EM+ + P + +YT
Sbjct: 377 KIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYT 436
Query: 528 ALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK 587
+LI V C + A LF+++ G P+L L+DG C I +D A L EM
Sbjct: 437 SLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMM 496
Query: 588 GIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
I PD VTY L+ G+ E +L GEMK I D
Sbjct: 497 SINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPD 536
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 193/441 (43%), Gaps = 47/441 (10%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
+V FN++I V L+ A + G++ I + N L++
Sbjct: 224 NVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLII 283
Query: 196 XXLMETGPLPNIHTYTIMMS--CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
+ G P++ TY ++S C + R A+E+L ++ G P V+Y IRG G
Sbjct: 284 SEMKSKGFQPDMQTYNPILSWMCNEGR-ASEVLREMKEIGLVPDSVSYNILIRGCSNNGD 342
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
+++A ++ + + +N +IHG + A ++ E++ D +YN+
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLC-KNKLKGQQLYDKSLEVYN 371
L+N +C+ GD I+P+ YTSLI +LC KNK + ++ E++
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTR------EADELFE 456
Query: 372 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 431
++ ++P+ ++ N ++ HC G A +LL++ IN + +YN ++ +C E
Sbjct: 457 KVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEG 516
Query: 432 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
+ A ELM M +R + P ++Y+TLISG++K+
Sbjct: 517 KFEEARELMGEMKRRGIKPDHISYNTLISGYSKK-------------------------- 550
Query: 492 TTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR 551
G T+ A+ EM+ P ++Y AL+ +E +A L +EM
Sbjct: 551 -------GDTK---HAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKS 600
Query: 552 IGCLPNLYTYTCLIDGFCKID 572
G +PN ++ +I+ +D
Sbjct: 601 EGIVPNDSSFCSVIEAMSNLD 621
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 153 bits (386), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 195/431 (45%), Gaps = 49/431 (11%)
Query: 202 GPLPNIHTYT--IMMSCGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 257
G +P+ T+ I+ C R+ AA+++ ++ G P +TYG + GLC+ G VD A
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA 341
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF-PDVYSYNMLLN 316
+ L ++ FN +IHGF G +++A VL +M +S PDV +YN L+
Sbjct: 342 ----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 317 AFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQN 376
+ K+G L +LEV + M
Sbjct: 398 GYWKEG---------------------------------------LVGLALEVLHDMRNK 418
Query: 377 AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMA 436
+PN ++ C+ G+ EA +L + G+ N +N +I CKE A
Sbjct: 419 GCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 478
Query: 437 LELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLIS 496
+E+ M ++ P V +++LISG E + L ++ G+ NT TY TLI+
Sbjct: 479 VEIFREMPRKGCKPDVYTFNSLISGLC-EVDEIKHALWLLRDMISEGVVANTVTYNTLIN 537
Query: 497 IHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLP 556
R + +A EM+ DE++Y +LI C E++ A +LF++M R G P
Sbjct: 538 AFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAP 597
Query: 557 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 616
+ + LI+G C+ ++ A + EM +G PD+VT+ LI + GRI + +F
Sbjct: 598 SNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMF 657
Query: 617 GEMKANCILLD 627
+++A I D
Sbjct: 658 RKLQAEGIPPD 668
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 120/505 (23%), Positives = 201/505 (39%), Gaps = 58/505 (11%)
Query: 134 HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXX 193
HS V+ VLI +N + ++ + K+ G+ + + + +
Sbjct: 108 RHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGI---VFKESLFISIMRDYDKAGFPGQ 164
Query: 194 XXXXLMETGPL----PNIHTYT----IMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYI 245
++E + P +Y I++S ++AA + + PT+ T+G +
Sbjct: 165 TTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVM 224
Query: 246 RGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF 305
+ C +D A L+R + NS + +IH + VNEAL++LEEM
Sbjct: 225 KAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 284
Query: 306 PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYD 364
PD ++N ++ CK + P + Y L+ LCK
Sbjct: 285 PDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIG-------- 336
Query: 365 KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF-HEQGINLNQYSYNEI 423
++ + +P +I N ++ G+ +A +L D GI + +YN +
Sbjct: 337 -RVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395
Query: 424 IHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAG 483
I+ KE +ALE++ M + P V +Y+ L+ GF K
Sbjct: 396 IYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK------------------- 436
Query: 484 ITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVAC 543
K +AY EM L P+ V + LI+ FC + A
Sbjct: 437 -----------------LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 479
Query: 544 ALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWY 603
+F+EM R GC P++YT+ LI G C++D I A L +M +G+ + VTY LI +
Sbjct: 480 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 539
Query: 604 HKHGRIGEKNKLFGEMKANCILLDD 628
+ G I E KL EM LD+
Sbjct: 540 LRRGEIKEARKLVNEMVFQGSPLDE 564
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 173/380 (45%), Gaps = 14/380 (3%)
Query: 203 PLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGG-NPTVVTYGTYIRGLCECGYVDVA 257
P P I + ++ + G + A +L + S G P V TY + I G + G V +A
Sbjct: 349 PKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
+++ + K N + + ++ GFC+ G ++EA VL EM + P+ +N L++A
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468
Query: 318 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCK-NKLKGQQLYDKSLEVYNSMLQ 375
FCK+ + KP + + SLI LC+ +++K +L + M+
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK------HALWLLRDMIS 522
Query: 376 NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 435
+ NT+ N ++ R G+ +EA L+ + QG L++ +YN +I +C+
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582
Query: 436 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
A L +ML+ P ++ + LI+G + E VE +V G T + T+ +LI
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE-FQKEMVLRGSTPDIVTFNSLI 641
Query: 496 SIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCL 555
+ R + F ++ + PD V++ L++ C + AC L E G +
Sbjct: 642 NGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFV 701
Query: 556 PNLYTYTCLIDGFCKIDYID 575
PN T++ L+ + +D
Sbjct: 702 PNHRTWSILLQSIIPQETLD 721
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 160/382 (41%), Gaps = 22/382 (5%)
Query: 90 FRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFAS 149
F +IH F G + A+L D+V + + D V +N LI +
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMV---------TSYGIVPD-----VCTYNSLIYGYWK 401
Query: 150 NSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHT 209
++ A +V +N G + ++ S L+ + G PN
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 210 YTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH 265
+ ++S C + R+ A EI ++ R G P V T+ + I GLCE + A L+R +
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 266 CKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVX 325
+ N+ +N +I+ F +RG + EA +++ EM + D +YN L+ C+ G+V
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVD 581
Query: 326 XXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIIC 385
PS ++ LI N L + ++++E M+ P+ +
Sbjct: 582 KARSLFEKMLRDGHAPSNISCNILI----NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTF 637
Query: 386 NHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLK 445
N ++ CR G+ + LT+ +GI + ++N ++ +CK + A L+ ++
Sbjct: 638 NSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIE 697
Query: 446 RNVLPGVVNYSTLISGFAKEQS 467
+P +S L+ +++
Sbjct: 698 DGFVPNHRTWSILLQSIIPQET 719
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 102/250 (40%), Gaps = 12/250 (4%)
Query: 76 SWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHH 135
++ + H +V FR G +V+ I G C+ D+ L D+
Sbjct: 468 AFCKEHRIPEAVEIFR----EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 136 SVLV----FNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXX 191
V+ +N LI F ++ A ++ G L + N L+K L
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKA 583
Query: 192 XXXXXXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRG 247
++ G P+ + I+++ G + A E ++ G P +VT+ + I G
Sbjct: 584 RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 643
Query: 248 LCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 307
LC G ++ + RKL + P ++ FN ++ C+ G V +A +L+E P+
Sbjct: 644 LCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
Query: 308 VYSYNMLLNA 317
++++LL +
Sbjct: 704 HRTWSILLQS 713
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 133/544 (24%), Positives = 236/544 (43%), Gaps = 26/544 (4%)
Query: 121 DSFEQFSTLLDL-----PHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSC 175
D E S LL L P +V+ F LI F ++ A +F + G+E + +
Sbjct: 265 DQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 176 NFLLKCLXXXXXXXXXXXXXXXLMETGPLPNI----HTYTIMMSCGDIRLAAEILGKIYR 231
+ L+ + G ++ T + + GD+ A+ + ++
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLC 384
Query: 232 SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 291
G +P VVTY I+GLC+ G + A + ++ + + ++++I GFC+ G +
Sbjct: 385 QGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS 444
Query: 292 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI- 350
+ E+M PDV Y +L++ K+G + I+ ++V + SLI
Sbjct: 445 GFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLID 504
Query: 351 LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFRE------ALTL 404
C+ +D++L+V+ M I+P+ ++RV E F + L L
Sbjct: 505 GWCR-----LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQL 559
Query: 405 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 464
+ I+ + N +IH++ K + A + +++ + P +V Y+T+I G+
Sbjct: 560 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 619
Query: 465 EQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEV 524
+ + ER+F L NT T T LI + + A F M + P+ V
Sbjct: 620 LR-RLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 678
Query: 525 SYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM 584
+Y L+ F ++ + LF+EM G P++ +Y+ +IDG CK +D AT +F +
Sbjct: 679 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 738
Query: 585 KRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD----GIKKLQDPKLVQ 640
+ PDVV Y +LI Y K GR+ E L+ M N + DD + + PK +
Sbjct: 739 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYNPPKWLM 798
Query: 641 FKNV 644
K V
Sbjct: 799 SKGV 802
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/475 (24%), Positives = 198/475 (41%), Gaps = 73/475 (15%)
Query: 214 MSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA---------------- 257
+S I +A+ +L + G P VVT+ T I G C+ G +D A
Sbjct: 262 LSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDL 321
Query: 258 -------------------HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEE 298
HKL + K L+ F++ I + + G + A V +
Sbjct: 322 IAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKR 381
Query: 299 MKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI---LLCKN 355
M P+V +Y +L+ C+ G + ++PSIV Y+SLI C N
Sbjct: 382 MLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGN 441
Query: 356 KLKGQQLYDKSLE--------VYN--------------------SMLQNAIRPNTIICNH 387
G LY+ ++ +Y ML +IR N ++ N
Sbjct: 442 LRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNS 501
Query: 388 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHM------ICKESYPKMALELMP 441
++ CR +F EAL + GI + ++ ++ + CK P + L+L
Sbjct: 502 LIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFD 561
Query: 442 RMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRT 501
+++RN + + ++ + E + F L++ + + TY T+I +
Sbjct: 562 -LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSL 620
Query: 502 RKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTY 561
R+ +A F + + P+ V+ T LI V C +M+ A +F M+ G PN TY
Sbjct: 621 RRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTY 680
Query: 562 TCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 616
CL+D F K I+ + +LF+EM+ KGI P +V+Y+++I K GR+ E +F
Sbjct: 681 GCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIF 735
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 144/332 (43%), Gaps = 62/332 (18%)
Query: 362 LYDKSLEVYNSMLQN---------AIRPNTI---ICNHILRVHCREGQFREALTLLEDFH 409
++D + +V++ M+ N +IR ++ +C ++ CR G +AL +
Sbjct: 114 MFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYST 173
Query: 410 EQGINLNQYSYNEIIH-------------------------------------MICKESY 432
+ G+ + Q S +++ + CK
Sbjct: 174 QLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEV 233
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
K AL+ +++R G+V+ + ++ G + +Q E+ RL + ++ G N T+
Sbjct: 234 TK-ALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ--IEVASRLLSLVLDCGPAPNVVTFC 290
Query: 493 TLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI 552
TLI+ + + +A+ F M Q + PD ++Y+ LI + + + LF +
Sbjct: 291 TLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHK 350
Query: 553 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 612
G ++ ++ ID + K + A+ ++ M +GI P+VVTYT+LI + GRI E
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEA 410
Query: 613 NKLFGEMKANCILLDDGIKKLQDPKLVQFKNV 644
++G++ +K+ +P +V + ++
Sbjct: 411 FGMYGQI----------LKRGMEPSIVTYSSL 432
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 140/574 (24%), Positives = 250/574 (43%), Gaps = 22/574 (3%)
Query: 81 HGFSHSVNYFRIIIHTFAMAGMHLEVFA-LLRDIVGYCKCDDSFE-QFSTLLDLPHHSVL 138
GF HS F I+IH A + + L ++ K D F FS S
Sbjct: 98 RGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSS 157
Query: 139 VFNVLIKVFASNSMLEHAHQVF-VSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 197
F++LI+ + + + VF + V L +R+ + LL L
Sbjct: 158 SFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFND 217
Query: 198 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++ G P+++ YT ++ D+ A E++ + +G + +V Y I GLC+
Sbjct: 218 MVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 277
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
V A + + L K + + +++G C+ LE+++EM R P + +
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNS 372
L+ K+G + + P++ Y +LI LC KG++ ++ L +++
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLC----KGRKFHEAEL-LFDR 392
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
M + +RPN + + ++ + CR G+ AL+ L + + G+ L+ Y YN +I+ CK
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
A M M+ + + P VV Y++L+ G+ + RL+ + GI + T+T
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYC-SKGKINKALRLYHEMTGKGIAPSIYTFT 511
Query: 493 TLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI 552
TL+S R A F EM + + P+ V+Y +I +C +M+ A +EM+
Sbjct: 512 TLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEK 571
Query: 553 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 612
G +P+ Y+Y LI G C A D + + + + YT L+ + + G++ E
Sbjct: 572 GIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEA 631
Query: 613 NKLFGEMKANCILLD--------DGIKKLQDPKL 638
+ EM + LD DG K +D KL
Sbjct: 632 LSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/469 (24%), Positives = 204/469 (43%), Gaps = 44/469 (9%)
Query: 198 LMETGPLPNIHTYTIMMSC---GDIRLAAEIL-GKIYRSGGNPTVVTYGTYIRGLCECGY 253
+++ G PN+ Y ++ G AE+L ++ + G P VTY I C G
Sbjct: 358 VVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGK 417
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
+D A + ++ L+ + +N++I+G C+ G ++ A + EM + + P V +Y
Sbjct: 418 LDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTS 477
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
L+ +C KG + I PSI +T+L+ + L L +++++N M
Sbjct: 478 LMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLL----SGLFRAGLIRDAVKLFNEM 533
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
+ ++PN + N ++ +C EG +A L++ E+GI + YSY +IH +C
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQA 593
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTT 493
A + + K N + Y+ L+ GF +E E + +V+ G+ + Y
Sbjct: 594 SEAKVFVDGLHKGNCELNEICYTGLLHGFCRE-GKLEEALSVCQEMVQRGVDLDLVCYGV 652
Query: 494 LISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIG 553
LI + + R + EM L PD+V YT++I + A ++ M G
Sbjct: 653 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712
Query: 554 CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR--------------------------- 586
C+PN TYT +I+G CK +++ A L +M+
Sbjct: 713 CVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKA 772
Query: 587 --------KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
KG+ + TY +LI + + GRI E ++L M + + D
Sbjct: 773 VELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPD 821
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/491 (23%), Positives = 203/491 (41%), Gaps = 38/491 (7%)
Query: 138 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 197
+ +++LI +F L+ A + GL+L + N L+
Sbjct: 403 VTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAE 462
Query: 198 LMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++ P + TYT +M S G I A + ++ G P++ T+ T + GL G
Sbjct: 463 MINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Query: 254 VDVAHKLVRKL-HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 312
+ A KL ++ + P N +N +I G+C+ G +++A E L+EM PD YSY
Sbjct: 523 IRDAVKLFNEMAEWNVKP-NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYR 581
Query: 313 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI---------------------- 350
L++ C G + + + YT L+
Sbjct: 582 PLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQR 641
Query: 351 -----LLCKNKLKGQQLYDKSLEVYNSMLQN----AIRPNTIICNHILRVHCREGQFREA 401
L+C L L K +++ +L+ ++P+ +I ++ + G F+EA
Sbjct: 642 GVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEA 701
Query: 402 LTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISG 461
+ + +G N+ +Y +I+ +CK + A L +M + +P V Y +
Sbjct: 702 FGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDI 761
Query: 462 FAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCP 521
K + + + L ++K G+ NT TY LI R + +A MI + P
Sbjct: 762 LTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSP 820
Query: 522 DEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLF 581
D ++YT +I C ++ A L+ M+ G P+ Y LI G C + AT+L
Sbjct: 821 DCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELR 880
Query: 582 DEMKRKGIFPD 592
+EM R+G+ P+
Sbjct: 881 NEMLRQGLIPN 891
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 195/467 (41%), Gaps = 15/467 (3%)
Query: 100 AGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHH----SVLVFNVLIKVFASNSMLEH 155
G+ L V+ I G+CK D + ++ + +V+ + L+ + S +
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 156 AHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS 215
A +++ G+ I + LL L + E PN TY +M+
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 216 C----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPL 271
GD+ A E L ++ G P +Y I GLC G A V LH L
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 272 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 331
N C+ ++HGFC+ G + EAL V +EM D+ Y +L++ K D
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 670
Query: 332 XXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRV 391
+KP V YTS+I K+K + ++ +++ M+ PN + ++
Sbjct: 671 KEMHDRGLKPDDVIYTSMI-DAKSKTGD---FKEAFGIWDLMINEGCVPNEVTYTAVING 726
Query: 392 HCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK-ESYPKMALELMPRMLKRNVLP 450
C+ G EA L NQ +Y + ++ K E + A+EL +LK +L
Sbjct: 727 LCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLA 785
Query: 451 GVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCR 510
Y+ LI GF + Q E L TR++ G++ + TYTT+I+ R KA
Sbjct: 786 NTATYNMLIRGFCR-QGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIEL 844
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPN 557
+ M + + PD V+Y LI C EM A L EM R G +PN
Sbjct: 845 WNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/405 (27%), Positives = 176/405 (43%), Gaps = 7/405 (1%)
Query: 217 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKL-HCKLHPLNSHC 275
G I A ++ ++ G +P + Y I LC+ A L ++ L P N
Sbjct: 346 GKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRP-NDVT 404
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
++ +I FC+RG ++ AL L EM + VY YN L+N CK GD+
Sbjct: 405 YSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMI 464
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
+++P++V YTSL+ +K K +K+L +Y+ M I P+ +L R
Sbjct: 465 NKKLEPTVVTYTSLMGGYCSKGK----INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRA 520
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
G R+A+ L + E + N+ +YN +I C+E A E + M ++ ++P +Y
Sbjct: 521 GLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSY 580
Query: 456 STLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMI 515
LI G E + L K N YT L+ R K +A EM+
Sbjct: 581 RPLIHGLCLTGQASE-AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMV 639
Query: 516 QSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 575
Q + D V Y LI ++ + L +EM G P+ YT +ID K
Sbjct: 640 QRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFK 699
Query: 576 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
A ++D M +G P+ VTYT +I K G + E L +M+
Sbjct: 700 EAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/524 (22%), Positives = 216/524 (41%), Gaps = 46/524 (8%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
++ V+N LI A +F +GL + + + L+
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 196 XXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
+++TG +++ Y +++ GDI A + ++ PTVVTY + + G C
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Query: 252 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 311
G ++ A +L ++ K + + F ++ G + G + +A+++ EM P+ +Y
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 312 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVY 370
N+++ +C++GD+ I P +Y LI LC L GQ K
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLC---LTGQASEAKVF--V 600
Query: 371 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 430
+ + + N I +L CREG+ EAL++ ++ ++G++L+ Y +I K
Sbjct: 601 DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKH 660
Query: 431 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKT 490
K+ L+ M R + P V Y+++I +K +F+ ++ ++ G N T
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSK-TGDFKEAFGIWDLMINEGCVPNEVT 719
Query: 491 YTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSY------------------------ 526
YT +I+ + ++A +M P++V+Y
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAI 779
Query: 527 -----------TALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 575
LI FC + A L M G P+ TYT +I+ C+ + +
Sbjct: 780 LKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVK 839
Query: 576 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
A +L++ M KGI PD V Y LI G +G+ +L EM
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 125/500 (25%), Positives = 211/500 (42%), Gaps = 50/500 (10%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
S++ + +LI F ++ A K +GLE + L++
Sbjct: 211 SLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALF 270
Query: 196 XXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
++E G P TY ++ G ++ A+EI + G P V TY I GLC
Sbjct: 271 DEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGV 330
Query: 252 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 311
G A +L+ + K N+ +N +I+ C+ G V +A+E++E MK RT PD +Y
Sbjct: 331 GKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITY 390
Query: 312 NMLLNAFCKKGDVXXXXXXX--XXXXXCQIKPSIVNYTSLI-LLCK-NKLKGQQLYDKSL 367
N+LL C KGD+ P +++Y +LI LCK N+L ++L
Sbjct: 391 NILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH------QAL 444
Query: 368 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
++Y+ +++ + + N +L + G +A+ L + + I N +Y +I
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504
Query: 428 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFN 487
CK +A L+ +M + P V +Y+ L+S KE S
Sbjct: 505 CKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGS-------------------- 544
Query: 488 TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQ 547
+A+ F EM + PD VS+ +I ++ A +L
Sbjct: 545 ----------------LDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLV 588
Query: 548 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 607
MSR G P+L+TY+ LI+ F K+ Y+D A FD+M G PD ++ + G
Sbjct: 589 GMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQG 648
Query: 608 RIGEKNKLFGEMKANCILLD 627
+ +L ++ I+LD
Sbjct: 649 ETDKLTELVKKLVDKDIVLD 668
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/456 (23%), Positives = 211/456 (46%), Gaps = 11/456 (2%)
Query: 167 GLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLA 222
G ++ + N LLK L + +P++ +Y ++ ++ A
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 223 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHG 282
E+ ++ SG + ++VT+G I C+ G +D A ++++ + + ++I G
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 283 FCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPS 342
FC G ++ + +E+ P +YN L+ FCK G + ++P+
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPN 316
Query: 343 IVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREAL 402
+ YT LI + L G ++L++ N M++ PN + N I+ C++G +A+
Sbjct: 317 VYTYTGLI----DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372
Query: 403 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN--VLPGVVNYSTLIS 460
++E ++ + +YN ++ +C + A +L+ MLK + P V++Y+ LI
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH 432
Query: 461 GFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLC 520
G KE + ++ ++ LV+ + T L++ + +KA + ++ S +
Sbjct: 433 GLCKENRLHQALD-IYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491
Query: 521 PDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQL 580
+ +YTA+I FC +NVA L +M P+++ Y CL+ CK +D A +L
Sbjct: 492 RNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRL 551
Query: 581 FDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 616
F+EM+R FPDVV++ ++I K G I L
Sbjct: 552 FEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLL 587
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 129/272 (47%), Gaps = 11/272 (4%)
Query: 370 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 429
Y ML+ N + + +L + + + A +L ++G N Y++N ++ +C+
Sbjct: 95 YRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCR 154
Query: 430 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTK 489
A+ L+ M + +++P V +Y+T+I GF E E L + +G +++
Sbjct: 155 NLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFC-EGKELEKALELANEMKGSGCSWSLV 213
Query: 490 TYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM 549
T+ LI + K +A EM L D V YT+LI FC+ E++ ALF E+
Sbjct: 214 TWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273
Query: 550 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
G P TY LI GFCK+ + A+++F+ M +G+ P+V TYT LI G+
Sbjct: 274 LERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKT 333
Query: 610 GEKNKLFGEMKANCILLDDGIKKLQDPKLVQF 641
E +L M I+K ++P V +
Sbjct: 334 KEALQLLNLM----------IEKDEEPNAVTY 355
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 114/249 (45%), Gaps = 3/249 (1%)
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
ML+ N N +L+ CR + +A++LL + + + +SYN +I C+
Sbjct: 133 MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKE 192
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVK-AGITFNTKTY 491
+ ALEL M +V + LI F K E + F + +K G+ + Y
Sbjct: 193 LEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMG--FLKEMKFMGLEADLVVY 250
Query: 492 TTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR 551
T+LI + + F E+++ P ++Y LI FC + ++ A +F+ M
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 552 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
G PN+YTYT LIDG C + A QL + M K P+ VTY ++I K G + +
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVAD 370
Query: 612 KNKLFGEMK 620
++ MK
Sbjct: 371 AVEIVELMK 379
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 108/234 (46%), Gaps = 6/234 (2%)
Query: 389 LRVHCREG--QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKR 446
LR C + Q + A+++ + + G +L ++ N ++ + + ++A +ML+
Sbjct: 43 LRSLCEDSNPQLKNAVSVFQQAVDSGSSL-AFAGNNLMAKLVRSRNHELAFSFYRKMLET 101
Query: 447 NVLPGVVNYSTLISGFAK-EQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRH 505
+ V+ S L+ + + ++ F + ++K G FN + L+ R +
Sbjct: 102 DTFINFVSLSGLLECYVQMRKTGFAF--GVLALMLKRGFAFNVYNHNILLKGLCRNLECG 159
Query: 506 KAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLI 565
KA EM ++ L PD SY +I FC +E+ A L EM GC +L T+ LI
Sbjct: 160 KAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILI 219
Query: 566 DGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
D FCK +D A EMK G+ D+V YT LI + G + LF E+
Sbjct: 220 DAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEV 273
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/518 (23%), Positives = 221/518 (42%), Gaps = 72/518 (13%)
Query: 109 LLRDIVGYCKCDDSFEQFSTLLDL-PHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVG 167
+LR+ + + K DDS + F ++ P S+ F+ L+ + + ++ + +G
Sbjct: 52 MLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG 111
Query: 168 LELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCGDIRLAAEILG 227
+ ++ +CN LL C C + LA LG
Sbjct: 112 IPHNLCTCNILLNCFC-------------------------------RCSQLSLALSFLG 140
Query: 228 KIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRG 287
K+ + G P++VT+G+ +++GFC+
Sbjct: 141 KMIKLGHEPSIVTFGS-----------------------------------LLNGFCRGD 165
Query: 288 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYT 347
V +AL + ++M P+V YN +++ CK V I P +V Y
Sbjct: 166 RVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYN 225
Query: 348 SLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 407
SLI + L + + + + M + I P+ N ++ +EG+ EA E+
Sbjct: 226 SLI----SGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 408 FHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS 467
+ ++ + +Y+ +I+ +C S A E+ M+ + P VV YS LI+G+ K +
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSK- 340
Query: 468 NFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYT 527
E +LF + + G+ NT TYT LI + R K + A F M+ + P+ ++Y
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYN 400
Query: 528 ALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK 587
L+ C+ ++ A + +M + G ++ TY +I G CK + A ++ + +
Sbjct: 401 VLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ 460
Query: 588 GIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 625
G+ PD+ TYT ++ +K G E + LF +MK + IL
Sbjct: 461 GLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 186/393 (47%), Gaps = 7/393 (1%)
Query: 236 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 295
P++ + + + + DV L ++ P N N +++ FC+ ++ AL
Sbjct: 79 PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138
Query: 296 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCK 354
L +M P + ++ LLN FC+ V KP++V Y ++I LCK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198
Query: 355 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 414
+K D +L++ N M ++ I P+ + N ++ C G++ +A ++ ++ I
Sbjct: 199 SKQ-----VDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIY 253
Query: 415 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVER 474
+ +++N +I KE A E M++R++ P +V YS LI G S + E
Sbjct: 254 PDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM-YSRLDEAEE 312
Query: 475 LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFC 534
+F +V G + TY+ LI+ + +++K F EM Q + + V+YT LI +C
Sbjct: 313 MFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYC 372
Query: 535 NIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 594
++NVA +F+ M G PN+ TY L+ G C I+ A + +M++ G+ D+V
Sbjct: 373 RAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIV 432
Query: 595 TYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
TY ++I K G + + ++ + ++ D
Sbjct: 433 TYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPD 465
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/504 (25%), Positives = 211/504 (41%), Gaps = 80/504 (15%)
Query: 156 AHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS 215
A VF N G+ +CN LL L + + G P+++ +T ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 268
Query: 216 C----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPL 271
G + A ++ K+ +G P VVT+ T I GL CG D A K+ +
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 272 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 331
++ ++ G + + +A VL+EM P+V YN L+++F + G +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL------- 381
Query: 332 XXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRV 391
+K++E+ + M+ + + N +++
Sbjct: 382 --------------------------------NKAIEIKDLMVSKGLSLTSSTYNTLIKG 409
Query: 392 HCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPG 451
+C+ GQ A LL++ G N+NQ S+ +I ++C AL + ML RN+ PG
Sbjct: 410 YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPG 469
Query: 452 VVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKT--------------------- 490
+TLISG K + + +E F L K G +T+T
Sbjct: 470 GGLLTTLISGLCKHGKHSKALELWFQFLNK-GFVVDTRTSNALLHGLCEAGKLDEAFRIQ 528
Query: 491 --------------YTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNI 536
Y TLIS +K +A+ EM++ L PD +Y+ LI N+
Sbjct: 529 KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNM 588
Query: 537 REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTY 596
++ A + + R G LP++YTY+ +IDG CK + + + FDEM K + P+ V Y
Sbjct: 589 NKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 648
Query: 597 TVLIAWYHKHGRIGEKNKLFGEMK 620
LI Y + GR+ +L +MK
Sbjct: 649 NHLIRAYCRSGRLSMALELREDMK 672
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 122/498 (24%), Positives = 206/498 (41%), Gaps = 71/498 (14%)
Query: 200 ETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 255
E G PN+ T+ ++ CG A K+ G PT++TY ++GL +
Sbjct: 288 EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIG 347
Query: 256 VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLL 315
A+ +++++ K P N +N +I F + G++N+A+E+ + M S +YN L+
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Query: 316 NAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKN-------KLKGQQL----- 362
+CK G + ++TS+I LLC + + G+ L
Sbjct: 408 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS 467
Query: 363 ------------------YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 404
+ K+LE++ L +T N +L C G+ EA +
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 405 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV---------------- 448
++ +G +++ SYN +I C + A + M+KR +
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 449 -------------------LPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTK 489
LP V YS +I G K + E E F ++ + NT
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE-FFDEMMSKNVQPNTV 646
Query: 490 TYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM 549
Y LI + R+ + A +M + P+ +YT+LI I + A LF+EM
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Query: 550 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
G PN++ YT LIDG+ K+ + L EM K + P+ +TYTV+I Y + G +
Sbjct: 707 RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Query: 610 GEKNKLFGEMKANCILLD 627
E ++L EM+ I+ D
Sbjct: 767 TEASRLLNEMREKGIVPD 784
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 135/576 (23%), Positives = 232/576 (40%), Gaps = 50/576 (8%)
Query: 101 GMHLEVFALLRDIVGYCK---CDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHA 156
G+ +V+ I +CK +++ + FS + + +V+ FN +I + A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 157 HQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS- 215
G+E + + + L+K L + + G PN+ Y ++
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 216 ---CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLN 272
G + A EI + G + T TY T I+G C+ G D A +L++++ +N
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 273 SHCFNAVI-----------------------------------HGFCQRGAVNEALEVLE 297
F +VI G C+ G ++ALE+
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 298 EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKL 357
+ + D + N LL+ C+ G + V+Y +LI C K
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 358 KGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQ 417
K D++ + M++ ++P+ + ++ + EA+ +D G+ +
Sbjct: 555 K----LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 610
Query: 418 YSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFT 477
Y+Y+ +I CK + E M+ +NV P V Y+ LI + + M L
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR-SGRLSMALELRE 669
Query: 478 RLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIR 537
+ GI+ N+ TYT+LI + +A F EM L P+ YTALI + +
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729
Query: 538 EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYT 597
+M L +EM PN TYT +I G+ + + A++L +EM+ KGI PD +TY
Sbjct: 730 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 789
Query: 598 VLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKL 633
I Y K G + E K G + N + +G KL
Sbjct: 790 EFIYGYLKQGGVLEAFK--GSDEENYAAIIEGWNKL 823
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 126/504 (25%), Positives = 211/504 (41%), Gaps = 80/504 (15%)
Query: 156 AHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS 215
A VF N G+ +CN LL L + + G P+++ +T ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 268
Query: 216 C----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPL 271
G + A ++ K+ +G P VVT+ T I GL CG D A K+ +
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 272 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 331
++ ++ G + + +A VL+EM P+V YN L+++F + G +
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSL------- 381
Query: 332 XXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRV 391
+K++E+ + M+ + + N +++
Sbjct: 382 --------------------------------NKAIEIKDLMVSKGLSLTSSTYNTLIKG 409
Query: 392 HCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPG 451
+C+ GQ A LL++ G N+NQ S+ +I ++C AL + ML RN+ PG
Sbjct: 410 YCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPG 469
Query: 452 VVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKT--------------------- 490
+TLISG K + + +E F L K G +T+T
Sbjct: 470 GGLLTTLISGLCKHGKHSKALELWFQFLNK-GFVVDTRTSNALLHGLCEAGKLDEAFRIQ 528
Query: 491 --------------YTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNI 536
Y TLIS +K +A+ EM++ L PD +Y+ LI N+
Sbjct: 529 KEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNM 588
Query: 537 REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTY 596
++ A + + R G LP++YTY+ +IDG CK + + + FDEM K + P+ V Y
Sbjct: 589 NKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVY 648
Query: 597 TVLIAWYHKHGRIGEKNKLFGEMK 620
LI Y + GR+ +L +MK
Sbjct: 649 NHLIRAYCRSGRLSMALELREDMK 672
Score = 149 bits (376), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 122/498 (24%), Positives = 206/498 (41%), Gaps = 71/498 (14%)
Query: 200 ETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 255
E G PN+ T+ ++ CG A K+ G PT++TY ++GL +
Sbjct: 288 EAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIG 347
Query: 256 VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLL 315
A+ +++++ K P N +N +I F + G++N+A+E+ + M S +YN L+
Sbjct: 348 DAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLI 407
Query: 316 NAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKN-------KLKGQQL----- 362
+CK G + ++TS+I LLC + + G+ L
Sbjct: 408 KGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMS 467
Query: 363 ------------------YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 404
+ K+LE++ L +T N +L C G+ EA +
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 405 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV---------------- 448
++ +G +++ SYN +I C + A + M+KR +
Sbjct: 528 QKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFN 587
Query: 449 -------------------LPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTK 489
LP V YS +I G K + E E F ++ + NT
Sbjct: 588 MNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE-FFDEMMSKNVQPNTV 646
Query: 490 TYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM 549
Y LI + R+ + A +M + P+ +YT+LI I + A LF+EM
Sbjct: 647 VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM 706
Query: 550 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
G PN++ YT LIDG+ K+ + L EM K + P+ +TYTV+I Y + G +
Sbjct: 707 RMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNV 766
Query: 610 GEKNKLFGEMKANCILLD 627
E ++L EM+ I+ D
Sbjct: 767 TEASRLLNEMREKGIVPD 784
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 135/576 (23%), Positives = 232/576 (40%), Gaps = 50/576 (8%)
Query: 101 GMHLEVFALLRDIVGYCK---CDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHA 156
G+ +V+ I +CK +++ + FS + + +V+ FN +I + A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 157 HQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS- 215
G+E + + + L+K L + + G PN+ Y ++
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 216 ---CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLN 272
G + A EI + G + T TY T I+G C+ G D A +L++++ +N
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 273 SHCFNAVI-----------------------------------HGFCQRGAVNEALEVLE 297
F +VI G C+ G ++ALE+
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 298 EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKL 357
+ + D + N LL+ C+ G + V+Y +LI C K
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 358 KGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQ 417
K D++ + M++ ++P+ + ++ + EA+ +D G+ +
Sbjct: 555 K----LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDV 610
Query: 418 YSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFT 477
Y+Y+ +I CK + E M+ +NV P V Y+ LI + + M L
Sbjct: 611 YTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCR-SGRLSMALELRE 669
Query: 478 RLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIR 537
+ GI+ N+ TYT+LI + +A F EM L P+ YTALI + +
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729
Query: 538 EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYT 597
+M L +EM PN TYT +I G+ + + A++L +EM+ KGI PD +TY
Sbjct: 730 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYK 789
Query: 598 VLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKL 633
I Y K G + E K G + N + +G KL
Sbjct: 790 EFIYGYLKQGGVLEAFK--GSDEENYAAIIEGWNKL 823
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 189/411 (45%), Gaps = 38/411 (9%)
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
+D+ ++ R++ + + V+ G C+RG V ++ ++++E P+ Y+YN
Sbjct: 205 IDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNT 264
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
++NA+ K+ D + + V YT L+ L +K ++ D ++++ M
Sbjct: 265 IINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELS---VKNGKMSDAE-KLFDEM 320
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
+ I + + ++ +CR+G + A L ++ E+G++ + Y+Y +I +CK
Sbjct: 321 RERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM 380
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAK--------------EQSNFEM-------- 471
A LM M + V V ++TLI G+ + EQ F+
Sbjct: 381 GAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTI 440
Query: 472 ------------VERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCL 519
++ R+++ G+ +T +YT LI ++ + +A F EM +
Sbjct: 441 ASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGV 500
Query: 520 CPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 579
P+ ++Y +I +C ++ A L M G P+ YTYT LI G C D +D A +
Sbjct: 501 QPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMR 560
Query: 580 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 630
LF EM KG+ + VTYTV+I+ K G+ E L+ EMK +D+ +
Sbjct: 561 LFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKV 611
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 201/470 (42%), Gaps = 13/470 (2%)
Query: 141 NVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLME 200
+++ +V+ N M E +VF GL + RSC L +++
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 201 TGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDV 256
+G +++ TI++ G++ + +++ + G P TY T I +
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277
Query: 257 AHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLN 316
+++ + N + ++ + G +++A ++ +EM+ DV+ Y L++
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337
Query: 317 AFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCK-NKLKGQQLYDKSLEVYNSML 374
C+KG++ + PS Y +LI +CK ++ ++ + N M
Sbjct: 338 WNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEI------LMNEMQ 391
Query: 375 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 434
+ ++ N ++ +CR+G EA + + ++G + ++ N I +
Sbjct: 392 SKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYD 451
Query: 435 MALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTL 494
A + + RM++ V V+Y+ LI + KE N E +RLF + G+ N TY +
Sbjct: 452 EAKQWLFRMMEGGVKLSTVSYTNLIDVYCKE-GNVEEAKRLFVEMSSKGVQPNAITYNVM 510
Query: 495 ISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGC 554
I + + K +A M + + PD +YT+LI C ++ A LF EM G
Sbjct: 511 IYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGL 570
Query: 555 LPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYH 604
N TYT +I G K D A L+DEMKRKG D YT LI H
Sbjct: 571 DQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMH 620
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 189/435 (43%), Gaps = 54/435 (12%)
Query: 206 NIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
+++++ I++ G+I + ++L ++ G +P VV Y T I G C+ G ++ A L
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
++ N + +I+G + G + E+ E+M+ FP++Y+YN ++N CK
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 322 GDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 381
G + +V++ M + + N
Sbjct: 282 GRT---------------------------------------KDAFQVFDEMRERGVSCN 302
Query: 382 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMP 441
+ N ++ CRE + EA +++ GIN N +YN +I C AL L
Sbjct: 303 IVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 442 RMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRT 501
+ R + P +V Y+ L+SGF + + + ++ + + GI + TYT LI R+
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCR-KGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS 421
Query: 502 RKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTY 561
KA M + L PD +Y+ LI FC +MN A LF+ M C PN Y
Sbjct: 422 DNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIY 481
Query: 562 TCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 621
+I G+CK A +L EM+ K + P+V +Y +I K + E +L +M
Sbjct: 482 NTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKM-- 539
Query: 622 NCILLDDGIKKLQDP 636
+D GI DP
Sbjct: 540 ----IDSGI----DP 546
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 168/352 (47%), Gaps = 7/352 (1%)
Query: 273 SHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXX 332
S+CFN ++ + N+ E KS + DVYS+ +L+ C+ G++
Sbjct: 129 SNCFNYLLTFVVGSSSFNQWWSFFNENKS-KVVLDVYSFGILIKGCCEAGEIEKSFDLLI 187
Query: 333 XXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVH 392
P++V YT+LI C K + ++ D E+ L R T++ N + +
Sbjct: 188 ELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK-- 245
Query: 393 CREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGV 452
G ++ + E E G+ N Y+YN +++ +CK+ K A ++ M +R V +
Sbjct: 246 --NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNI 303
Query: 453 VNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFG 512
V Y+TLI G +E E ++ ++ GI N TY TLI K KA
Sbjct: 304 VTYNTLIGGLCREMKLNE-ANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 513 EMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 572
++ L P V+Y L++ FC + + A + +EM G P+ TYT LID F + D
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 573 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM-KANC 623
++ A QL M+ G+ PDV TY+VLI + G++ E ++LF M + NC
Sbjct: 423 NMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNC 474
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/465 (22%), Positives = 204/465 (43%), Gaps = 21/465 (4%)
Query: 76 SWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHH 135
S+V++ + S++YF ++ + G + + LL +VG SF Q+ + +
Sbjct: 103 SYVQSQSLNLSISYFNEMVDNGFVPGSNCFNY-LLTFVVG----SSSFNQWWSFFNENKS 157
Query: 136 SVLV----FNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXX 191
V++ F +LIK +E + + + G ++ L+
Sbjct: 158 KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 192 XXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRG 247
+ + G + N TYT++++ G + E+ K+ G P + TY +
Sbjct: 218 KDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 248 LCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 307
LC+ G A ++ ++ + N +N +I G C+ +NEA +V+++MKS P+
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 308 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKS 366
+ +YN L++ FC G + + PS+V Y L+ C+ KG +
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCR---KGDT--SGA 392
Query: 367 LEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHM 426
++ M + I+P+ + ++ R +A+ L E G+ + ++Y+ +IH
Sbjct: 393 AKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHG 452
Query: 427 ICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITF 486
C + A L M+++N P V Y+T+I G+ KE S++ + +L + + +
Sbjct: 453 FCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRAL-KLLKEMEEKELAP 511
Query: 487 NTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIA 531
N +Y +I + + RK +A +MI S + P S +LI+
Sbjct: 512 NVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS-TSILSLIS 555
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/461 (24%), Positives = 199/461 (43%), Gaps = 82/461 (17%)
Query: 206 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
+++T ++M+C LA+ LGK+ + G P +VT
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVT--------------------- 144
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
F ++I+GFC + EA+ ++ +M PDV Y ++++ CK
Sbjct: 145 --------------FTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKN 190
Query: 322 GDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 381
G V I+P +V YTSL+ N L + + + M + I+P+
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLV----NGLCNSGRWRDADSLLRGMTKRKIKPD 246
Query: 382 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMP 441
I N ++ +EG+F +A L + I N ++Y +I+ C E A ++
Sbjct: 247 VITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFY 306
Query: 442 RMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRT 501
M + P VV Y++LI+GF K + + ++F + + G+T NT TYTTLI G+
Sbjct: 307 LMETKGCFPDVVAYTSLINGFCKCKK-VDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 502 RKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR---IGCLPNL 558
K + A F M+ + P+ +Y L+ C ++ A +F++M + G PN+
Sbjct: 366 GKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNI 425
Query: 559 YTYTCLIDGFCKIDYIDLATQLFDEMKR-------------------------------- 586
+TY L+ G C ++ A +F++M++
Sbjct: 426 WTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCS 485
Query: 587 ---KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 624
KG+ P+VVTYT +I+ + G E + LF +MK + +
Sbjct: 486 LPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/480 (23%), Positives = 206/480 (42%), Gaps = 20/480 (4%)
Query: 125 QFSTLLDL--------PHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCN 176
QF+ LDL P S++ F L+ V A + + + +G+ + +CN
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 177 FLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--AAEILGKIYRS 232
L+ C +M+ G P+I T+T +++ C R+ A ++ ++
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 233 GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEA 292
G P VV Y T I LC+ G+V+ A L ++ + + ++++G C G +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 293 LEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL 352
+L M + PDV ++N L++AF K+G I P+I YTSLI
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI-- 289
Query: 353 CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQG 412
N + D++ +++ M P+ + ++ C+ + +A+ + + ++G
Sbjct: 290 --NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 413 INLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF---AKEQSNF 469
+ N +Y +I + P +A E+ M+ R V P + Y+ L+ K +
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKAL 407
Query: 470 EMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTAL 529
+ E + R + G+ N TY L+ K KA F +M + + ++YT +
Sbjct: 408 MIFEDMQKREMD-GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTII 466
Query: 530 IAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 589
I C ++ A LF + G PN+ TYT +I G + A LF +MK G+
Sbjct: 467 IQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 148/310 (47%), Gaps = 40/310 (12%)
Query: 345 NYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 404
NY ++ +N L Q ++++L+++ M+++ P+ I +L V + +F + L
Sbjct: 39 NYREIL---RNGLHSLQ-FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINL 94
Query: 405 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 464
+ G++ + Y+ N +++ C+ S P +A + +M+K P +V +++LI+GF
Sbjct: 95 CDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCL 154
Query: 465 EQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEV 524
+ E + ++V+ GI + YTT+I + + A F +M + PD V
Sbjct: 155 -GNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVV 213
Query: 525 SYTALIAVFCN----------IREMNV-------------------------ACALFQEM 549
YT+L+ CN +R M A L+ EM
Sbjct: 214 MYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Query: 550 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
R+ PN++TYT LI+GFC +D A Q+F M+ KG FPDVV YT LI + K ++
Sbjct: 274 IRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKV 333
Query: 610 GEKNKLFGEM 619
+ K+F EM
Sbjct: 334 DDAMKIFYEM 343
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 122/288 (42%), Gaps = 15/288 (5%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
V+ FN LI F A +++ + + +I + L+
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 196 XXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
+ G P++ YT +++ C + A +I ++ + G +TY T I+G +
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 252 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSR---TFPDV 308
G +VA ++ + + P N +N ++H C G V +AL + E+M+ P++
Sbjct: 366 GKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNI 425
Query: 309 YSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCK-NKLKGQQLYDKS 366
++YN+LL+ C G + ++ I+ YT +I +CK K+K +
Sbjct: 426 WTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVK------NA 479
Query: 367 LEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 414
+ ++ S+ ++PN + ++ REG EA L E G++
Sbjct: 480 VNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 198/436 (45%), Gaps = 44/436 (10%)
Query: 205 PNIHTYTIMMSCGD-----IRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHK 259
P++ TY +++ LA + ++ + +P + T+G + GL + G A K
Sbjct: 160 PDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQK 219
Query: 260 LVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 319
+ + + N + +I G CQRG+ ++A ++ EM++S +PD ++N LL+ FC
Sbjct: 220 MFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFC 279
Query: 320 KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIR 379
K G + + Y+SLI + L + Y ++ E+Y +ML+ I+
Sbjct: 280 KLGRMVEAFELLRLFEKDGFVLGLRGYSSLI----DGLFRARRYTQAFELYANMLKKNIK 335
Query: 380 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 439
P+ I+ +++ + G+ +AL LL +GI+ + Y YN +I +C + L
Sbjct: 336 PDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSL 395
Query: 440 MPRMLKRNVLPGVVNYSTLI-----SGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTL 494
M + P ++ LI +G +E E +FT + K+G + + T+ L
Sbjct: 396 QLEMSETESFPDACTHTILICSMCRNGLVRE------AEEIFTEIEKSGCSPSVATFNAL 449
Query: 495 ISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIR-----------EMNVAC 543
I C+ GE+ ++ L ++ ++F + E
Sbjct: 450 ID----------GLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSIL 499
Query: 544 ALFQEMSRI---GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
+++++ G P++ +Y LI+GFC+ ID A +L + ++ KG+ PD VTY LI
Sbjct: 500 KAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLI 559
Query: 601 AWYHKHGRIGEKNKLF 616
H+ GR E KLF
Sbjct: 560 NGLHRVGREEEAFKLF 575
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 151/351 (43%), Gaps = 9/351 (2%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
F VI + + + LEE+KS D Y + +L++A+ K G
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
+P + Y ++ + ++ + + + VYN ML+ PN ++ ++
Sbjct: 155 EFDCRPDVFTYNVIL---RVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKK 211
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
G+ +A + +D +GI+ N+ +Y +I +C+ A +L M P V +
Sbjct: 212 GRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAH 271
Query: 456 STLISGFAKEQSNFEMVE--RLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE 513
+ L+ GF K E E RLF K G + Y++LI R R+ +A+ +
Sbjct: 272 NALLDGFCKLGRMVEAFELLRLFE---KDGFVLGLRGYSSLIDGLFRARRYTQAFELYAN 328
Query: 514 MIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 573
M++ + PD + YT LI ++ A L M G P+ Y Y +I C
Sbjct: 329 MLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGL 388
Query: 574 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM-KANC 623
++ L EM FPD T+T+LI ++G + E ++F E+ K+ C
Sbjct: 389 LEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGC 439
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 178/453 (39%), Gaps = 84/453 (18%)
Query: 241 YGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMK 300
+G I L E D+ + + +L ++S+CF +I + + G +A+E MK
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 301 SSRTFPDVYSYN------------------------------------MLLNAFCKKGDV 324
PDV++YN +L++ KKG
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 325 XXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTI 383
I P+ V YT LI LC+ +G D + +++ M + P+++
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQ---RGSA--DDARKLFYEMQTSGNYPDSV 269
Query: 384 ICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRM 443
N +L C+ G+ EA LL F + G L Y+ +I + + A EL M
Sbjct: 270 AHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANM 329
Query: 444 LKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI-SIHGRTR 502
LK+N+ P ++ Y+ LI G +K E +L + + GI+ +T Y +I ++ GR
Sbjct: 330 LKKNIKPDIILYTILIQGLSK-AGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGL 388
Query: 503 KRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYT 562
+ EM ++ PD ++T LI C + A +F E+ + GC P++ T+
Sbjct: 389 LEEGRSLQL-EMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFN 447
Query: 563 CLIDGFCKIDYIDLATQL-----------------------FDEMKRKGIF--------- 590
LIDG CK + A L FD M G
Sbjct: 448 ALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAH 507
Query: 591 -------PDVVTYTVLIAWYHKHGRIGEKNKLF 616
PD+V+Y VLI + + G I KL
Sbjct: 508 FADTGSSPDIVSYNVLINGFCRAGDIDGALKLL 540
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 160/380 (42%), Gaps = 26/380 (6%)
Query: 222 AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIH 281
A E+ + + P ++ Y I+GL + G ++ A KL+ + K +++C+NAVI
Sbjct: 322 AFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIK 381
Query: 282 GFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKP 341
C RG + E + EM + +FPD ++ +L+ + C+ G V P
Sbjct: 382 ALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSP 441
Query: 342 SIVNYTSLI-LLCKN-KLKGQQLYDKSLEVYNSMLQNAIRPNTIIC------NHILRVHC 393
S+ + +LI LCK+ +LK +L +EV RP ++ N
Sbjct: 442 SVATFNALIDGLCKSGELKEARLLLHKMEVG--------RPASLFLRLSHSGNRSFDTMV 493
Query: 394 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 453
G +A L F + G + + SYN +I+ C+ AL+L+ + + + P V
Sbjct: 494 ESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSV 553
Query: 454 NYSTLISGF---AKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCR 510
Y+TLI+G +E+ F++ K + Y +L++ R RK A+
Sbjct: 554 TYNTLINGLHRVGREEEAFKLF------YAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNL 607
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
+ + ++ C D+ + + F L + +R L L YT + G C+
Sbjct: 608 WMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDEL-TLGPYTIWLIGLCQ 666
Query: 571 IDYIDLATQLFDEMKRKGIF 590
A +F ++ K I
Sbjct: 667 SGRFHEALMVFSVLREKKIL 686
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 104/230 (45%), Gaps = 30/230 (13%)
Query: 421 NEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYST----------------------- 457
E+I ++ K+ + ALE + L +N++ V+
Sbjct: 35 GEVISILAKKKPIEPALEPLVPFLSKNIITSVIKDEVNRQLGFRFFIWASRRERLRSRES 94
Query: 458 --LISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMI 515
L+ E + ++ + L G++ ++ + LIS + + KA FG M
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 516 QSCLCPDEVSYTALIAVFCNIRE---MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 572
+ PD +Y ++ V +RE +A A++ EM + C PNLYT+ L+DG K
Sbjct: 155 EFDCRPDVFTYNVILRVM--MREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKG 212
Query: 573 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
A ++FD+M +GI P+ VTYT+LI+ + G + KLF EM+ +
Sbjct: 213 RTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTS 262
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 150/375 (40%), Gaps = 22/375 (5%)
Query: 141 NVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLME 200
+LI N ++ A ++F + G + + N L+ L ME
Sbjct: 412 TILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHK-ME 470
Query: 201 TGPLPNI---------HTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
G ++ ++ M+ G I A L +G +P +V+Y I G C
Sbjct: 471 VGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRA 530
Query: 252 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 311
G +D A KL+ L K +S +N +I+G + G EA ++ R P V Y
Sbjct: 531 GDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV--Y 588
Query: 312 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYN 371
L+ C+K V +I + I C + + ++ + +E+
Sbjct: 589 RSLMTWSCRKRKVLVAFNLWMKYLK-KISCLDDETANEIEQCFKEGETERALRRLIELDT 647
Query: 372 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 431
+ + P TI + C+ G+F EAL + E+ I + S ++IH +CK
Sbjct: 648 RKDELTLGPYTIWLIGL----CQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKRE 703
Query: 432 YPKMALELMPRMLKRN--VLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTK 489
A+E+ L N ++P V NY L+S + E+V +L R+ +AG ++
Sbjct: 704 QLDAAIEVFLYTLDNNFKLMPRVCNY--LLSSLLESTEKMEIVSQLTNRMERAGYNVDSM 761
Query: 490 TYTTLISIHGRTRKR 504
++ H R RK+
Sbjct: 762 LRFEILKYH-RHRKQ 775
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/375 (27%), Positives = 174/375 (46%), Gaps = 21/375 (5%)
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
DV + + K+ P N FN VI+ C+ G +N+A +V+E+MK P+V SYN
Sbjct: 205 ADVEYVYKEMIRRKIQP-NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 263
Query: 314 LLNAFCK---KGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLE 368
L++ +CK G + + P++ + LI + L G S++
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPG------SMK 317
Query: 369 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 428
V+ ML ++PN I N ++ C G+ EA+++ + G+ N +YN +I+ C
Sbjct: 318 VFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFC 377
Query: 429 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGF---AKEQSNFEMVERLFTRLVKAGIT 485
K K AL++ + + +P Y+ LI + K F + E + + GI
Sbjct: 378 KNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKE----EMEREGIV 433
Query: 486 FNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACAL 545
+ TY LI+ R A F ++ L PD V++ L+ +C E A L
Sbjct: 434 PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAML 492
Query: 546 FQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM-KRKGIFPDVVTYTVLIAWYH 604
+EMS++G P TY ++ G+CK + AT + +M K + + +V +Y VL+ Y
Sbjct: 493 LKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYS 552
Query: 605 KHGRIGEKNKLFGEM 619
+ G++ + N L EM
Sbjct: 553 QKGKLEDANMLLNEM 567
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 105/472 (22%), Positives = 203/472 (43%), Gaps = 53/472 (11%)
Query: 138 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 197
++ ++L+ +A+NS E + F + G +L SC L+ L
Sbjct: 154 IIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKE 213
Query: 198 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++ PN+ T+ ++++ G + A +++ + G +P VV+Y T I G C+ G
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 254 VDVAHK----LVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 309
+K L + + P N FN +I GF + + +++V +EM P+V
Sbjct: 274 NGKMYKADAVLKEMVENDVSP-NLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVI 332
Query: 310 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLE 368
SYN L+N C G + ++P+++ Y +LI CKN + ++L+
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKN-----DMLKEALD 387
Query: 369 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 428
++ S+ P T + N ++ +C+ G+ + L E+ +GI
Sbjct: 388 MFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGI--------------- 432
Query: 429 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNT 488
+P V Y+ LI+G + N E ++LF +L G+ +
Sbjct: 433 --------------------VPDVGTYNCLIAGLCR-NGNIEAAKKLFDQLTSKGLP-DL 470
Query: 489 KTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQE 548
T+ L+ + R + KA EM + L P ++Y ++ +C + A + +
Sbjct: 471 VTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQ 530
Query: 549 MSRIGCLP-NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 599
M + L N+ +Y L+ G+ + ++ A L +EM KG+ P+ +TY ++
Sbjct: 531 MEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 121/247 (48%), Gaps = 2/247 (0%)
Query: 385 CNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRML 444
C ++ +E + + + ++ + I N +++N +I+ +CK A ++M M
Sbjct: 191 CKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMK 250
Query: 445 KRNVLPGVVNYSTLISGFAKEQSNFEM--VERLFTRLVKAGITFNTKTYTTLISIHGRTR 502
P VV+Y+TLI G+ K N +M + + +V+ ++ N T+ LI +
Sbjct: 251 VYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDD 310
Query: 503 KRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYT 562
+ F EM+ + P+ +SY +LI CN +++ A ++ +M G PNL TY
Sbjct: 311 NLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYN 370
Query: 563 CLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
LI+GFCK D + A +F +K +G P Y +LI Y K G+I + L EM+
Sbjct: 371 ALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE 430
Query: 623 CILLDDG 629
I+ D G
Sbjct: 431 GIVPDVG 437
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 129/290 (44%), Gaps = 16/290 (5%)
Query: 103 HLEVFALLRDIVGYCKCDD---SFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQ 158
+L F +L D G+ K D+ S + F +LD +V+ +N LI + + A
Sbjct: 295 NLTTFNILID--GFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAIS 352
Query: 159 VFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC-- 216
+ + G++ ++ + N L+ + G +P Y +++
Sbjct: 353 MRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYC 412
Query: 217 --GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSH 274
G I + ++ R G P V TY I GLC G ++ A KL +L K P +
Sbjct: 413 KLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLV 471
Query: 275 CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXX-XXXXX 333
F+ ++ G+C++G +A +L+EM P +YN+++ +CK+G++
Sbjct: 472 TFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQM 531
Query: 334 XXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTI 383
+++ ++ +Y +LL KG +L D ++ + N ML+ + PN I
Sbjct: 532 EKERRLRMNVASYN--VLLQGYSQKG-KLEDANM-LLNEMLEKGLVPNRI 577
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 128/540 (23%), Positives = 239/540 (44%), Gaps = 52/540 (9%)
Query: 133 PHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLX---XXXXXX 189
P S +F++ + + A Q+F + L+ ++ +CN LL L
Sbjct: 127 PPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIS 186
Query: 190 XXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRLAAEILGKIYRSGG----NPTVVTYGT 243
+++ G N+ T+ ++++ C + +L + LG + R NP VTY T
Sbjct: 187 SAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLE-DALGMLERMVSEFKVNPDNVTYNT 245
Query: 244 YIRGLCECGYV-DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSS 302
++ + + G + D+ L+ L P N +N +++G+C+ G++ EA +++E MK +
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVP-NRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 303 RTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLC--------K 354
PD+ +YN+L+N C G + +++P +V Y +LI C
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 355 NKLKGQQLYD--KSLEV-YNSMLQ---------------------NAIRPNTIICNHILR 390
KL Q D K+ +V +N L+ + P+ + + +++
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424
Query: 391 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 450
+ + G AL ++ + ++GI +N + N I+ +CKE A L+ KR +
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484
Query: 451 GVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISI---HGRTRKRHKA 507
V Y TLI GF +E+ E ++ + K IT T+ +LI HG+T A
Sbjct: 485 DEVTYGTLIMGFFREE-KVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKT---ELA 540
Query: 508 YCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDG 567
+F E+ +S L PD+ ++ ++I +C + A + E + P+ YT L++G
Sbjct: 541 MEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNG 600
Query: 568 FCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
CK + A F+ + + D VTY +I+ + K ++ E L EM+ + D
Sbjct: 601 LCKEGMTEKALNFFNTLIEEREV-DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPD 659
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 129/528 (24%), Positives = 230/528 (43%), Gaps = 62/528 (11%)
Query: 147 FASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLK--CLXXXXXXXXXXXXXXXLMETGPL 204
+ S+ + A +VF +G+ L++++ N L+ CL + E
Sbjct: 179 YPSSFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERM-VSEFKVN 237
Query: 205 PNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 260
P+ TY ++ G + E+L + ++G P VTY + G C+ G + A ++
Sbjct: 238 PDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQI 297
Query: 261 VRKLHCKLHPLNSHC-FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 319
V +L + + L C +N +I+G C G++ E LE+++ MKS + PDV +YN L++
Sbjct: 298 V-ELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCF 356
Query: 320 KKGDVXXXXXXXXXXXXCQIKPSIVNYT-SLILLCKNKLKGQQLYDKSLEVYNSMLQNAI 378
+ G +K + V + SL LCK + K + + K E+ + +
Sbjct: 357 ELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEE-KREAVTRKVKELVD---MHGF 412
Query: 379 RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 438
P+ + + +++ + + G AL ++ + ++GI +N + N I+ +CKE A
Sbjct: 413 SPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHN 472
Query: 439 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISI- 497
L+ KR + V Y TLI GF +E+ E ++ + K IT T+ +LI
Sbjct: 473 LLNSAHKRGFIVDEVTYGTLIMGFFREE-KVEKALEMWDEMKKVKITPTVSTFNSLIGGL 531
Query: 498 --HGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCL 555
HG+T A +F E+ +S L PD+ ++ ++I +C + A + E +
Sbjct: 532 CHHGKT---ELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFK 588
Query: 556 PNLYT----------------------------------YTCLIDGFCKIDYIDLATQLF 581
P+ YT Y +I FCK + A L
Sbjct: 589 PDNYTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTVTYNTMISAFCKDKKLKEAYDLL 648
Query: 582 DEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL-------FGEMKAN 622
EM+ KG+ PD TY I+ + G++ E ++L FG MK +
Sbjct: 649 SEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFGSMKRD 696
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/439 (25%), Positives = 189/439 (43%), Gaps = 18/439 (4%)
Query: 202 GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLC---ECGYV 254
P P+ + I +S G +A +I K+ R P ++T T + GL +
Sbjct: 126 SPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSI 185
Query: 255 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSS-RTFPDVYSYNM 313
A ++ + LN FN +++G+C G + +AL +LE M S + PD +YN
Sbjct: 186 SSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNT 245
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCK-NKLKGQQLYDKSLEVYN 371
+L A KKG + + P+ V Y +L+ CK LK ++ ++
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLK------EAFQIVE 299
Query: 372 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 431
M Q + P+ N ++ C G RE L L++ + + +YN +I +
Sbjct: 300 LMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELG 359
Query: 432 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKA-GITFNTKT 490
A +LM +M V V ++ + KE+ E V R LV G + + T
Sbjct: 360 LSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKR-EAVTRKVKELVDMHGFSPDIVT 418
Query: 491 YTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMS 550
Y TLI + + A EM Q + + ++ ++ C R+++ A L
Sbjct: 419 YHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAH 478
Query: 551 RIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIG 610
+ G + + TY LI GF + + ++ A +++DEMK+ I P V T+ LI HG+
Sbjct: 479 KRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTE 538
Query: 611 EKNKLFGEMKANCILLDDG 629
+ F E+ + +L DD
Sbjct: 539 LAMEKFDELAESGLLPDDS 557
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 145 bits (366), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 151/649 (23%), Positives = 270/649 (41%), Gaps = 111/649 (17%)
Query: 74 FGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDL- 132
F ++ HG S +VN + ++ G+ +++ ++L +++ + E+ T++DL
Sbjct: 76 FLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELI------KNEERGFTVMDLI 129
Query: 133 ---------PHHSVLVFNV---LIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLK 180
S ++ V L+K + S M + A V +K + + I++CNFL+
Sbjct: 130 EVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMN 189
Query: 181 CLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNP 236
+ L + G N +TY I++ G++ AA +L + N
Sbjct: 190 RMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIE------NE 243
Query: 237 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSH---CFNAVIHGFCQRGAVNEAL 293
+V Y T+I GLC G + A L+ +L + + V+ GFC + A
Sbjct: 244 SVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAE 303
Query: 294 EVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLC 353
V+ EM+ DVY+ +++ +CK ++ +K + V SLIL C
Sbjct: 304 SVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCV-IVSLILQC 362
Query: 354 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 413
K+ + ++LE + I + + N + G+ EA LL++ ++GI
Sbjct: 363 YCKM---DMCLEALEKFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGI 419
Query: 414 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK---EQSNFE 470
+ +Y +I C + AL+L+ M+ + P ++ Y+ L+SG A+ E+ E
Sbjct: 420 VPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLE 479
Query: 471 MVERL--------------------FTRLVKAGITF----------NTKTYTTLISIHGR 500
+ ER+ F R VK F N ++ G
Sbjct: 480 IYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGL 539
Query: 501 TRKRHKAYCRFGEMIQSC--------LC---------------------PDEVSYTALIA 531
++K +KA+ R ++ LC P +I
Sbjct: 540 SKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIG 599
Query: 532 VFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFP 591
FC + + A LF M G +P+L+TYT +I +C+++ + A LF++MK++GI P
Sbjct: 600 AFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKP 659
Query: 592 DVVTYTVLIAWYHK-----------HGRIGEK--NKLFGEMKANCILLD 627
DVVTYTVL+ Y K G +G++ +++ E A I LD
Sbjct: 660 DVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLD 708
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 170/381 (44%), Gaps = 48/381 (12%)
Query: 271 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 330
L+ C+N + G V EA E+L+EMK PDV +Y L++ +C +G V
Sbjct: 386 LDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDL 445
Query: 331 XXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHIL 389
+ P ++ Y L+ L +N G + ++ LE+Y M +PN + + I+
Sbjct: 446 IDEMIGNGMSPDLITYNVLVSGLARN---GHE--EEVLEIYERMKAEGPKPNAVTNSVII 500
Query: 390 RVHCREGQFREA---------------LTLLEDFHEQGINLNQYS-------------YN 421
C + +EA + ++ + E G++ Y Y
Sbjct: 501 EGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYI 560
Query: 422 EIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVK 481
++ +C E Y + A +++ +M V PG +I F K +N + LF +V+
Sbjct: 561 KLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCK-LNNVREAQVLFDTMVE 619
Query: 482 AGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVF-------- 533
G+ + TYT +I + R + KA F +M Q + PD V+YT L+ +
Sbjct: 620 RGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHH 679
Query: 534 --CNIRE---MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKG 588
C+++ A + +E S G ++ YT LID CK++ ++ A +LFD M G
Sbjct: 680 ETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSG 739
Query: 589 IFPDVVTYTVLIAWYHKHGRI 609
+ PD+V YT LI+ Y + G I
Sbjct: 740 LEPDMVAYTTLISSYFRKGYI 760
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 155/385 (40%), Gaps = 36/385 (9%)
Query: 209 TYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKL 268
+ + G + A E+L ++ G P V+ Y T I G C G V A L+ ++
Sbjct: 394 AFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNG 453
Query: 269 HPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC--KKGDVXX 326
+ +N ++ G + G E LE+ E MK+ P+ + ++++ C +K
Sbjct: 454 MSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAE 513
Query: 327 XXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG----------------------QQLYD 364
+ K S V L K K + +
Sbjct: 514 DFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLE 573
Query: 365 KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEII 424
K+ +V M + P +C ++ C+ REA L + E+G+ + ++Y +I
Sbjct: 574 KAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMI 633
Query: 425 HMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNF--------EMVERLF 476
H C+ + + A L M +R + P VV Y+ L+ + K E+ +R
Sbjct: 634 HTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKA 693
Query: 477 TRLVK----AGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAV 532
+ +++ AGI + YT LI + +A F MI S L PD V+YT LI+
Sbjct: 694 SEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISS 753
Query: 533 FCNIREMNVACALFQEMSRIGCLPN 557
+ +++A L E+S+ +P+
Sbjct: 754 YFRKGYIDMAVTLVTELSKKYNIPS 778
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 101/447 (22%), Positives = 161/447 (36%), Gaps = 72/447 (16%)
Query: 218 DIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFN 277
D LA L ++ G +P V Y T +R L G L KL +
Sbjct: 69 DPNLALSFLRQLKEHGVSPNVNAYATLVRILTTWG-----------LDIKLDSVLVELIK 117
Query: 278 AVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKG--DVXXXXXXXXXXX 335
GF + E EE K R+F + L+ A+ G D
Sbjct: 118 NEERGFTVMDLIEVIGEQAEEKK--RSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRL 175
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
C + N+ N++ + ++ + Q + N +++ CR+
Sbjct: 176 DCVVDIKACNFLM------NRMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRK 229
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
G EA LL + N + + Y I+ +C + A+ L+ ++ R L G
Sbjct: 230 GNLEEAAMLLIE------NESVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLR 283
Query: 456 STL---ISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTR---------- 502
+ L + GF E + E + + + G F Y L I +
Sbjct: 284 AVLGMVVRGFCNEM-KMKAAESVIIEMEEIG--FGLDVYACLAVIDRYCKNMNLPEALGF 340
Query: 503 ------KRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNV--------------- 541
K K C +I C C ++ AL F R+MN+
Sbjct: 341 LDKMLGKGLKVNCVIVSLILQCYCKMDMCLEAL-EKFKEFRDMNIFLDRVCYNVAFDALS 399
Query: 542 -------ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 594
A L QEM G +P++ YT LIDG+C + A L DEM G+ PD++
Sbjct: 400 KLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLI 459
Query: 595 TYTVLIAWYHKHGRIGEKNKLFGEMKA 621
TY VL++ ++G E +++ MKA
Sbjct: 460 TYNVLVSGLARNGHEEEVLEIYERMKA 486
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 190/413 (46%), Gaps = 19/413 (4%)
Query: 206 NIHTYTIMMS--CGDIRLAAEIL---GKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 260
N HTY+ ++ C +L +L ++ G P+VV++ + + G C+ G+VD+A
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIG-PSVVSFNSIMSGYCKLGFVDMAKSF 244
Query: 261 V-RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 319
L C L P + + N +I+G C G++ EALE+ +M PD +YN+L F
Sbjct: 245 FCTVLKCGLVP-SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFH 303
Query: 320 KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIR 379
G + + P ++ YT ILLC G D L + ML
Sbjct: 304 LLGMISGAWEVIRDMLDKGLSPDVITYT--ILLCGQCQLGN--IDMGLVLLKDMLSRGFE 359
Query: 380 PNTII-CNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 438
N+II C+ +L C+ G+ EAL+L G++ + +Y+ +IH +CK MAL
Sbjct: 360 LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW 419
Query: 439 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIH 498
L M + +LP + L+ G ++ E L L+ +G T + Y +I +
Sbjct: 420 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLE-ARSLLDSLISSGETLDIVLYNIVIDGY 478
Query: 499 GRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNL 558
++ +A F +I++ + P ++ +LI +C + + A + + G P++
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 538
Query: 559 YTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI-----AWYHKH 606
+YT L+D + +L EMK +GI P VTY+V+ W H++
Sbjct: 539 VSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHEN 591
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/503 (23%), Positives = 220/503 (43%), Gaps = 26/503 (5%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
SV+ FN ++ + ++ A F + GL + S N L+ L
Sbjct: 221 SVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELA 280
Query: 196 XXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
+ + G P+ TY I+ G I A E++ + G +P V+TY + G C+
Sbjct: 281 SDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 340
Query: 252 GYVDVAHKLVRKLHCKLHPLNS--HCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 309
G +D+ L++ + + LNS C + ++ G C+ G ++EAL + +MK+ PD+
Sbjct: 341 GNIDMGLVLLKDMLSRGFELNSIIPC-SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 310 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLE 368
+Y+++++ CK G +I P+ + +L+L LC+ KG L +SL
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ---KGMLLEARSL- 455
Query: 369 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 428
+S++ + + ++ N ++ + + G EAL L + E GI + ++N +I+ C
Sbjct: 456 -LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 429 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNT 488
K A +++ + + P VV+Y+TL+ +A N + ++ L + GI
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYAN-CGNTKSIDELRREMKAEGIPPTN 573
Query: 489 KTYTTLISIHGRT----------RKRHKAYCRFG--EMIQSCLCPDEVSYTALIAVFCNI 536
TY+ + R R+R C+ G +M + PD+++Y +I C +
Sbjct: 574 VTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRV 633
Query: 537 REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTY 596
+ ++ A + M + TY LID C YI A ++ + + Y
Sbjct: 634 KHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAY 693
Query: 597 TVLIAWYHKHGRIGEKNKLFGEM 619
T LI + G KLF ++
Sbjct: 694 TTLIKAHCVKGDPEMAVKLFHQL 716
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 144/346 (41%), Gaps = 41/346 (11%)
Query: 272 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 331
N H ++ V+ G C++ + +A+ L + P V S+N +++ +CK G V
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 332 XXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRV 391
C + PS+ ++ LI N L
Sbjct: 246 CTVLKCGLVPSVYSHNILI----NGL---------------------------------- 267
Query: 392 HCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPG 451
C G EAL L D ++ G+ + +YN + A E++ ML + + P
Sbjct: 268 -CLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPD 326
Query: 452 VVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY-TTLISIHGRTRKRHKAYCR 510
V+ Y+ L+ G + N +M L ++ G N+ + ++S +T + +A
Sbjct: 327 VITYTILLCGQC-QLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSL 385
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
F +M L PD V+Y+ +I C + + ++A L+ EM LPN T+ L+ G C+
Sbjct: 386 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ 445
Query: 571 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 616
+ A L D + G D+V Y ++I Y K G I E +LF
Sbjct: 446 KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 491
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 118/511 (23%), Positives = 191/511 (37%), Gaps = 79/511 (15%)
Query: 113 IVGYCKCDDSFEQFSTLLDLPHHSV----LVFNVLIKVFASNSMLEHAHQVFVSAKNVGL 168
I G C E D+ H V + +N+L K F M+ A +V + GL
Sbjct: 264 INGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGL 323
Query: 169 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETG-PLPNIHTYTIMMS----CGDIRLAA 223
+ + LL ++ G L +I ++M+S G I A
Sbjct: 324 SPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEAL 383
Query: 224 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 283
+ ++ G +P +V Y I GLC+ G D+A L ++ K NS A++ G
Sbjct: 384 SLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGL 443
Query: 284 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 343
CQ+G + EA +L+ + SS D+ YN++++ + K G + I PS+
Sbjct: 444 CQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSV 503
Query: 344 VNYTSLIL-LCK--NKLKGQQLYD---------------------------KSL-EVYNS 372
+ SLI CK N + +++ D KS+ E+
Sbjct: 504 ATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRRE 563
Query: 373 MLQNAIRPNTII----------------CNHILRVHCREGQFREALTLLEDFHEQGINLN 416
M I P + CNH+L RE F + L D +GI +
Sbjct: 564 MKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVL----RERIFEKCKQGLRDMESEGIPPD 619
Query: 417 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS-----GFAKEQSNFEM 471
Q +YN II +C+ + A + M RN+ Y+ LI G+ ++ +F
Sbjct: 620 QITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF-- 677
Query: 472 VERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIA 531
L + ++ + YTTLI H A F +++ Y+A+I
Sbjct: 678 ----IYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 733
Query: 532 VFCNIREMN--------VACALFQEMSRIGC 554
C MN V C + E S + C
Sbjct: 734 RLCRRHLMNCFPGQSNGVCCLISNERSFVYC 764
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/508 (21%), Positives = 208/508 (40%), Gaps = 45/508 (8%)
Query: 68 IAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIV------------- 114
IA + S + HG + I+ F + GM + ++RD++
Sbjct: 273 IAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTI 332
Query: 115 ---GYCKCDDSFEQFSTLLDLPH-----HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNV 166
G C+ + L D+ +S++ +V++ ++ A +F K
Sbjct: 333 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 167 GLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLA 222
GL + + + ++ L + + LPN T+ ++ G + A
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 223 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVR-KLHCKLHPLNSHCFNAVIH 281
+L + SG +V Y I G + G ++ A +L + + + P + FN++I+
Sbjct: 453 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP-SVATFNSLIY 511
Query: 282 GFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKP 341
G+C+ + EA ++L+ +K P V SY L++A+ G+ I P
Sbjct: 512 GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Query: 342 SIVNYTSLIL-LCK-------NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 393
+ V Y+ + LC+ N + +++++K + M I P+ I N I++ C
Sbjct: 572 TNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLC 631
Query: 394 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 453
R A LE + ++ + +YN +I +C Y + A + + ++NV
Sbjct: 632 RVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKF 691
Query: 454 NYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE 513
Y+TLI + + EM +LF +L+ G + + Y+ +I+ R +RH C G+
Sbjct: 692 AYTTLIKAHCV-KGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN---RLCRRHLMNCFPGQ 747
Query: 514 MIQ-SCLCPDEVSYTALIAVFCNIREMN 540
CL +E S+ V+C I N
Sbjct: 748 SNGVCCLISNERSF-----VYCPILSAN 770
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 160/375 (42%), Gaps = 48/375 (12%)
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
VD + +++K+ + +++ +N+V++ F + ++ +V +E+K + ++Y+
Sbjct: 140 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRE---TDKMWDVYKEIKD----KNEHTYST 192
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNS 372
+++ C++ + I PS+V++ S++ CK D + + +
Sbjct: 193 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCK-----LGFVDMAKSFFCT 247
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
+L+ + P+ N ++ C G EAL L D ++ G+ + +YN +
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
A E++ ML + + P V+ Y+ L+ G + N +M L ++ G N+
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQC-QLGNIDMGLVLLKDMLSRGFELNS---- 362
Query: 493 TLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI 552
I C + +++ C ++ A +LF +M
Sbjct: 363 ----------------------IIPC--------SVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 553 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 612
G P+L Y+ +I G CK+ D+A L+DEM K I P+ T+ L+ + G + E
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 613 NKLFGEMKANCILLD 627
L + ++ LD
Sbjct: 453 RSLLDSLISSGETLD 467
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 121/255 (47%), Gaps = 22/255 (8%)
Query: 381 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS-----YNEIIHMICKESYPKM 435
+T++ +H+L R F+E +LE ++ ++ ++ ++ + +
Sbjct: 86 STLLVSHVLAGQRR---FKELQVILEQLLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDD 142
Query: 436 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
+L ++ +M +N+ +Y++++ F + +++ + + + N TY+T++
Sbjct: 143 SLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDK--------NEHTYSTVV 194
Query: 496 SIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCL 555
R +K A + P VS+ ++++ +C + +++A + F + + G +
Sbjct: 195 DGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLV 254
Query: 556 PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL 615
P++Y++ LI+G C + I A +L +M + G+ PD VTY +L +H G I ++
Sbjct: 255 PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEV 314
Query: 616 FGEMKANCILLDDGI 630
+M LD G+
Sbjct: 315 IRDM------LDKGL 323
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 137/577 (23%), Positives = 238/577 (41%), Gaps = 39/577 (6%)
Query: 74 FGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLP 133
F S ++ F H+ F ++I AM G V LL+ + + F
Sbjct: 63 FKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQM--------KLQGF------- 107
Query: 134 HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXX 193
H S +F +I V+ + E A ++F K G + ++ N +L L
Sbjct: 108 HCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYM 167
Query: 194 XXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLC 249
+ G PN+ TY +++ + A ++L ++ G P V+Y T I +C
Sbjct: 168 VYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMC 227
Query: 250 ECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 309
E G V K R+L + P+ S +NA+I+G C+ A E++ EM P+V
Sbjct: 228 EVGLV----KEGRELAERFEPVVS-VYNALINGLCKEHDYKGAFELMREMVEKGISPNVI 282
Query: 310 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEV 369
SY+ L+N C G + P+I +SL+ C L+G +L++
Sbjct: 283 SYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCF--LRGTTF--DALDL 338
Query: 370 YNSMLQN-AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 428
+N M++ ++PN + N +++ C G +A+++ E G + N +Y +I+
Sbjct: 339 WNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFA 398
Query: 429 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNT 488
K A+ + +ML P VV Y+ ++ + S F+ E L + K +
Sbjct: 399 KRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCR-HSKFKEAESLIEIMSKENCAPSV 457
Query: 489 KTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDE-VSYTALIAVFCNIREMNVACALFQ 547
T+ I + A F +M Q CP V+Y L+ + A L +
Sbjct: 458 PTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTR 517
Query: 548 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 607
E+ G + TY L+ G C +A QL +M G PD +T ++I Y K G
Sbjct: 518 EIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQG 577
Query: 608 RIGEKNKLFGEMKANCILLDDGIKKLQDPKLVQFKNV 644
+ ++ L+ G +K + P ++ + NV
Sbjct: 578 KAERAAQMLD-------LVSCGRRKWR-PDVISYTNV 606
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 121/623 (19%), Positives = 240/623 (38%), Gaps = 140/623 (22%)
Query: 54 FHVVVRVIKSLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMH---LEVFALL 110
F V++R + +++ ++ + ++ GF S + F +I + G+ +E+F +
Sbjct: 79 FEVMIRKL-AMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 111 RDIVGYCKCDDSFEQFSTLLDLP---------------------HHSVLVFNVLIKVFAS 149
++ CD S + ++ +LD +V +NVL+K
Sbjct: 138 KEF----GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCK 193
Query: 150 NSMLEHAHQVFVSAKNVG------------------------------LELHIRSCNFLL 179
N+ ++ A ++ V N G E + N L+
Sbjct: 194 NNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALI 253
Query: 180 KCLXXXXXXXXXXXXXXXLMETGPLPNIHTYT----IMMSCGDIRLAAEILGKIYRSGGN 235
L ++E G PN+ +Y+ ++ + G I LA L ++ + G +
Sbjct: 254 NGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCH 313
Query: 236 PTVVTYGTYIRGLCECG----YVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 291
P + T + ++G G +D+ ++++R L P N +N ++ GFC G + +
Sbjct: 314 PNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF--GLQP-NVVAYNTLVQGFCSHGNIVK 370
Query: 292 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI- 350
A+ V M+ P++ +Y L+N F K+G + P++V YT+++
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430
Query: 351 LLCKN----------KLKGQQLYDKSLEVYNSML---------------------QNAIR 379
LC++ ++ ++ S+ +N+ + Q+
Sbjct: 431 ALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490
Query: 380 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 439
PN + N +L + + EA L + +G+ + +YN ++H C P +AL+L
Sbjct: 491 PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQL 550
Query: 440 MPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHG 499
+ +M+ P + + +I + K+ + L L+S G
Sbjct: 551 VGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML-----------------DLVSC-G 592
Query: 500 RTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFC--NIREMNVACALFQEMSRIGCLPN 557
R + R PD +SYT +I C N RE V L + M G +P+
Sbjct: 593 RRKWR----------------PDVISYTNVIWGLCRSNCREDGV--ILLERMISAGIVPS 634
Query: 558 LYTYTCLIDGFCKIDYIDLATQL 580
+ T++ LI+ F D + Q
Sbjct: 635 IATWSVLINCFILDDIVRAHDQF 657
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 190/413 (46%), Gaps = 19/413 (4%)
Query: 206 NIHTYTIMMS--CGDIRLAAEIL---GKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 260
N HTY+ ++ C +L +L ++ G P+VV++ + + G C+ G+VD+A
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIG-PSVVSFNSIMSGYCKLGFVDMAKSF 244
Query: 261 V-RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 319
L C L P + + N +I+G C G++ EALE+ +M PD +YN+L F
Sbjct: 245 FCTVLKCGLVP-SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFH 303
Query: 320 KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIR 379
G + + P ++ YT ILLC G D L + ML
Sbjct: 304 LLGMISGAWEVIRDMLDKGLSPDVITYT--ILLCGQCQLGN--IDMGLVLLKDMLSRGFE 359
Query: 380 PNTII-CNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 438
N+II C+ +L C+ G+ EAL+L G++ + +Y+ +IH +CK MAL
Sbjct: 360 LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW 419
Query: 439 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIH 498
L M + +LP + L+ G ++ E L L+ +G T + Y +I +
Sbjct: 420 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLE-ARSLLDSLISSGETLDIVLYNIVIDGY 478
Query: 499 GRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNL 558
++ +A F +I++ + P ++ +LI +C + + A + + G P++
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSV 538
Query: 559 YTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI-----AWYHKH 606
+YT L+D + +L EMK +GI P VTY+V+ W H++
Sbjct: 539 VSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHEN 591
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 118/503 (23%), Positives = 220/503 (43%), Gaps = 26/503 (5%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
SV+ FN ++ + ++ A F + GL + S N L+ L
Sbjct: 221 SVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELA 280
Query: 196 XXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
+ + G P+ TY I+ G I A E++ + G +P V+TY + G C+
Sbjct: 281 SDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQL 340
Query: 252 GYVDVAHKLVRKLHCKLHPLNS--HCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 309
G +D+ L++ + + LNS C + ++ G C+ G ++EAL + +MK+ PD+
Sbjct: 341 GNIDMGLVLLKDMLSRGFELNSIIPC-SVMLSGLCKTGRIDEALSLFNQMKADGLSPDLV 399
Query: 310 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLE 368
+Y+++++ CK G +I P+ + +L+L LC+ KG L +SL
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ---KGMLLEARSL- 455
Query: 369 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 428
+S++ + + ++ N ++ + + G EAL L + E GI + ++N +I+ C
Sbjct: 456 -LDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYC 514
Query: 429 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNT 488
K A +++ + + P VV+Y+TL+ +A N + ++ L + GI
Sbjct: 515 KTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYAN-CGNTKSIDELRREMKAEGIPPTN 573
Query: 489 KTYTTLISIHGRT----------RKRHKAYCRFG--EMIQSCLCPDEVSYTALIAVFCNI 536
TY+ + R R+R C+ G +M + PD+++Y +I C +
Sbjct: 574 VTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRV 633
Query: 537 REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTY 596
+ ++ A + M + TY LID C YI A ++ + + Y
Sbjct: 634 KHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAY 693
Query: 597 TVLIAWYHKHGRIGEKNKLFGEM 619
T LI + G KLF ++
Sbjct: 694 TTLIKAHCVKGDPEMAVKLFHQL 716
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 144/346 (41%), Gaps = 41/346 (11%)
Query: 272 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 331
N H ++ V+ G C++ + +A+ L + P V S+N +++ +CK G V
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 332 XXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRV 391
C + PS+ ++ LI N L
Sbjct: 246 CTVLKCGLVPSVYSHNILI----NGL---------------------------------- 267
Query: 392 HCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPG 451
C G EAL L D ++ G+ + +YN + A E++ ML + + P
Sbjct: 268 -CLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPD 326
Query: 452 VVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY-TTLISIHGRTRKRHKAYCR 510
V+ Y+ L+ G + N +M L ++ G N+ + ++S +T + +A
Sbjct: 327 VITYTILLCGQC-QLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSL 385
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
F +M L PD V+Y+ +I C + + ++A L+ EM LPN T+ L+ G C+
Sbjct: 386 FNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQ 445
Query: 571 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 616
+ A L D + G D+V Y ++I Y K G I E +LF
Sbjct: 446 KGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELF 491
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 118/511 (23%), Positives = 191/511 (37%), Gaps = 79/511 (15%)
Query: 113 IVGYCKCDDSFEQFSTLLDLPHHSV----LVFNVLIKVFASNSMLEHAHQVFVSAKNVGL 168
I G C E D+ H V + +N+L K F M+ A +V + GL
Sbjct: 264 INGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGL 323
Query: 169 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETG-PLPNIHTYTIMMS----CGDIRLAA 223
+ + LL ++ G L +I ++M+S G I A
Sbjct: 324 SPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEAL 383
Query: 224 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 283
+ ++ G +P +V Y I GLC+ G D+A L ++ K NS A++ G
Sbjct: 384 SLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGL 443
Query: 284 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 343
CQ+G + EA +L+ + SS D+ YN++++ + K G + I PS+
Sbjct: 444 CQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSV 503
Query: 344 VNYTSLIL-LCK--NKLKGQQLYD---------------------------KSL-EVYNS 372
+ SLI CK N + +++ D KS+ E+
Sbjct: 504 ATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRRE 563
Query: 373 MLQNAIRPNTII----------------CNHILRVHCREGQFREALTLLEDFHEQGINLN 416
M I P + CNH+L RE F + L D +GI +
Sbjct: 564 MKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVL----RERIFEKCKQGLRDMESEGIPPD 619
Query: 417 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS-----GFAKEQSNFEM 471
Q +YN II +C+ + A + M RN+ Y+ LI G+ ++ +F
Sbjct: 620 QITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF-- 677
Query: 472 VERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIA 531
L + ++ + YTTLI H A F +++ Y+A+I
Sbjct: 678 ----IYSLQEQNVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 733
Query: 532 VFCNIREMN--------VACALFQEMSRIGC 554
C MN V C + E S + C
Sbjct: 734 RLCRRHLMNCFPGQSNGVCCLISNERSFVYC 764
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 108/508 (21%), Positives = 208/508 (40%), Gaps = 45/508 (8%)
Query: 68 IAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIV------------- 114
IA + S + HG + I+ F + GM + ++RD++
Sbjct: 273 IAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTI 332
Query: 115 ---GYCKCDDSFEQFSTLLDLPH-----HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNV 166
G C+ + L D+ +S++ +V++ ++ A +F K
Sbjct: 333 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 167 GLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLA 222
GL + + + ++ L + + LPN T+ ++ G + A
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 223 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVR-KLHCKLHPLNSHCFNAVIH 281
+L + SG +V Y I G + G ++ A +L + + + P + FN++I+
Sbjct: 453 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP-SVATFNSLIY 511
Query: 282 GFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKP 341
G+C+ + EA ++L+ +K P V SY L++A+ G+ I P
Sbjct: 512 GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Query: 342 SIVNYTSLIL-LCK-------NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 393
+ V Y+ + LC+ N + +++++K + M I P+ I N I++ C
Sbjct: 572 TNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLC 631
Query: 394 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 453
R A LE + ++ + +YN +I +C Y + A + + ++NV
Sbjct: 632 RVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKF 691
Query: 454 NYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE 513
Y+TLI + + EM +LF +L+ G + + Y+ +I+ R +RH C G+
Sbjct: 692 AYTTLIKAHCV-KGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN---RLCRRHLMNCFPGQ 747
Query: 514 MIQ-SCLCPDEVSYTALIAVFCNIREMN 540
CL +E S+ V+C I N
Sbjct: 748 SNGVCCLISNERSF-----VYCPILSAN 770
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 159/375 (42%), Gaps = 48/375 (12%)
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
VD + +++K+ + +++ +N+V++ F + ++ +V +E+K ++Y+
Sbjct: 140 VDDSLYILKKMKDQNLNVSTQSYNSVLYHFRE---TDKMWDVYKEIKDKNE----HTYST 192
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNS 372
+++ C++ + I PS+V++ S++ CK D + + +
Sbjct: 193 VVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCK-----LGFVDMAKSFFCT 247
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
+L+ + P+ N ++ C G EAL L D ++ G+ + +YN +
Sbjct: 248 VLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGM 307
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
A E++ ML + + P V+ Y+ L+ G + N +M L ++ G N+
Sbjct: 308 ISGAWEVIRDMLDKGLSPDVITYTILLCGQC-QLGNIDMGLVLLKDMLSRGFELNS---- 362
Query: 493 TLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI 552
I C + +++ C ++ A +LF +M
Sbjct: 363 ----------------------IIPC--------SVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 553 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 612
G P+L Y+ +I G CK+ D+A L+DEM K I P+ T+ L+ + G + E
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 613 NKLFGEMKANCILLD 627
L + ++ LD
Sbjct: 453 RSLLDSLISSGETLD 467
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 121/255 (47%), Gaps = 22/255 (8%)
Query: 381 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS-----YNEIIHMICKESYPKM 435
+T++ +H+L R F+E +LE ++ ++ ++ ++ + +
Sbjct: 86 STLLVSHVLAGQRR---FKELQVILEQLLQEEGTFRKWESTGLVWDMLLFLSSRLRMVDD 142
Query: 436 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
+L ++ +M +N+ +Y++++ F + +++ + + + N TY+T++
Sbjct: 143 SLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWDVYKEIKDK--------NEHTYSTVV 194
Query: 496 SIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCL 555
R +K A + P VS+ ++++ +C + +++A + F + + G +
Sbjct: 195 DGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLV 254
Query: 556 PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL 615
P++Y++ LI+G C + I A +L +M + G+ PD VTY +L +H G I ++
Sbjct: 255 PSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEV 314
Query: 616 FGEMKANCILLDDGI 630
+M LD G+
Sbjct: 315 IRDM------LDKGL 323
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/529 (23%), Positives = 216/529 (40%), Gaps = 72/529 (13%)
Query: 95 HTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLL-DLPHHSVLVFNVLIKVFASNSML 153
+F+ A H LR+ + K DD+F F +L P S++ F ++ V A +
Sbjct: 36 RSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKF 95
Query: 154 EHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIM 213
+ ++ +N+G+ + S L+ C
Sbjct: 96 DIVIYLYHKMENLGISHDLYSFTILIHCFC------------------------------ 125
Query: 214 MSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNS 273
C + LA +LGK+ + G P++VT G+
Sbjct: 126 -RCSRLSLALALLGKMMKLGFRPSIVTLGS------------------------------ 154
Query: 274 HCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXX 333
+++GFCQ EA+ +++ M P+V YN ++N CK D+
Sbjct: 155 -----LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYC 209
Query: 334 XXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 393
I+ V Y +LI + L + + + M++ I PN I ++
Sbjct: 210 MEKKGIRADAVTYNTLI----SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 265
Query: 394 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 453
+EG EA L ++ + + N ++YN +I+ C A + M+ + P VV
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 325
Query: 454 NYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE 513
Y+TLI+GF K + E +LF + G+ + TY TLI + + K + A F
Sbjct: 326 TYNTLITGFCKSK-RVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNR 384
Query: 514 MIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 573
M+ + PD V+Y L+ CN ++ A + +++ + ++ TY +I G C+ D
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444
Query: 574 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
+ A LF + RKG+ PD + Y +I+ + G E +KL MK +
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 176/448 (39%), Gaps = 70/448 (15%)
Query: 78 VETHGFSHSVNYFRIIIHTFAMA----------------GMHLEVFALLRDIVGYCKCDD 121
+E G SH + F I+IH F G + L + G+C+ +
Sbjct: 105 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQ-GN 163
Query: 122 SFEQFSTLLD-------LPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRS 174
F++ +L+D +P+ V+++N +I N L +A +VF + G+ +
Sbjct: 164 RFQEAVSLVDSMDGFGFVPN--VVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVT 221
Query: 175 CNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIY 230
N L+ L +++ PN+ +T ++ G++ A + ++
Sbjct: 222 YNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMI 281
Query: 231 RSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVN 290
R P V TY + I G C G + A + + K + +N +I GFC+ V
Sbjct: 282 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 341
Query: 291 EALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI 350
+ +++ EM D ++YN L++ +C+ G + C + P IV Y
Sbjct: 342 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTY---- 397
Query: 351 LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHE 410
N +L C G+ +AL ++ED +
Sbjct: 398 -----------------------------------NILLDCLCNNGKIEKALVMVEDLQK 422
Query: 411 QGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFE 470
++++ +YN II +C+ K A L + ++ V P + Y T+ISG ++ E
Sbjct: 423 SEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQRE 482
Query: 471 MVERLFTRLVKAGITFNTKTYTTLISIH 498
++L R+ + G + + Y + H
Sbjct: 483 -ADKLCRRMKEDGFMPSERIYDETLRDH 509
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 88/241 (36%), Gaps = 81/241 (33%)
Query: 436 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
A L ML+ +P +V+++ +++ AK + F++V L+ ++ GI+
Sbjct: 63 AFSLFCEMLQSRPIPSIVDFTRVLTVIAK-MNKFDIVIYLYHKMENLGIS---------- 111
Query: 496 SIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNI------------------- 536
H Y S+T LI FC
Sbjct: 112 ---------HDLY----------------SFTILIHCFCRCSRLSLALALLGKMMKLGFR 146
Query: 537 ----------------REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQL 580
A +L M G +PN+ Y +I+G CK ++ A ++
Sbjct: 147 PSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEV 206
Query: 581 FDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKLQDPKLVQ 640
F M++KGI D VTY LI+ GR + + LL D +K+ DP ++
Sbjct: 207 FYCMEKKGIRADAVTYNTLISGLSNSGRWTDAAR----------LLRDMVKRKIDPNVIF 256
Query: 641 F 641
F
Sbjct: 257 F 257
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 183/419 (43%), Gaps = 44/419 (10%)
Query: 206 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
+++++T ++ C + LA LGK+ + G P++VT+G+ + G C A LV
Sbjct: 113 DLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLV 172
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
++ + N +N +I C++G VN AL+VL+ MK PDV +YN L+
Sbjct: 173 DQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHS 232
Query: 322 GDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 381
G I P ++ +++LI + +GQ L K + YN M+Q ++ PN
Sbjct: 233 GTWGVSARILSDMMRMGISPDVITFSALIDVYGK--EGQLLEAK--KQYNEMIQRSVNPN 288
Query: 382 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMP 441
+ N ++ C G EA +L +G N +YN +I+ CK ++++
Sbjct: 289 IVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILC 348
Query: 442 RMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRT 501
M + V Y+TL G+ + F E++ R+V G+
Sbjct: 349 VMSRDGVDGDTFTYNTLYQGYC-QAGKFSAAEKVLGRMVSCGVH---------------- 391
Query: 502 RKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTY 561
PD ++ L+ C+ ++ A +++ + + + TY
Sbjct: 392 -------------------PDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITY 432
Query: 562 TCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
+I G CK D ++ A LF + KG+ PDV+TY ++ + E ++L+ +M+
Sbjct: 433 NIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQ 491
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 154/389 (39%), Gaps = 58/389 (14%)
Query: 82 GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFN 141
GF S+ F +++ F E +L+ IVG +E +V+++N
Sbjct: 144 GFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL-----GYEP----------NVVIYN 188
Query: 142 VLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMET 201
+I + A V K +G+ + + N L+ L +M
Sbjct: 189 TIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRM 248
Query: 202 GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 257
G P++ T++ ++ G + A + ++ + NP +VTY + I GLC G +D A
Sbjct: 249 GISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEA 308
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
K++ L K N+ +N +I+G+C+ V++ +++L M D ++YN L
Sbjct: 309 KKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQG 368
Query: 318 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 377
+C+ G + + +V M+
Sbjct: 369 YCQAGK---------------------------------------FSAAEKVLGRMVSCG 389
Query: 378 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 437
+ P+ N +L C G+ +AL LED + + +YN II +CK + A
Sbjct: 390 VHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAW 449
Query: 438 ELMPRMLKRNVLPGVVNYSTLISGFAKEQ 466
L + + V P V+ Y T++ G +++
Sbjct: 450 YLFCSLALKGVSPDVITYITMMIGLRRKR 478
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 122/254 (48%), Gaps = 1/254 (0%)
Query: 363 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 422
++ +L ++ M ++ P+ + + +L + ++ ++L GI+ + YS+
Sbjct: 60 FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTT 119
Query: 423 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKA 482
+I C+ + +AL + +M+K P +V + +L++GF +E + L ++V
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMS-LVDQIVGL 178
Query: 483 GITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVA 542
G N Y T+I + + A M + + PD V+Y +LI + V+
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 543 CALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAW 602
+ +M R+G P++ T++ LID + K + A + ++EM ++ + P++VTY LI
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 603 YHKHGRIGEKNKLF 616
HG + E K+
Sbjct: 299 LCIHGLLDEAKKVL 312
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 92/184 (50%), Gaps = 1/184 (0%)
Query: 436 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
AL L M + + LP +V++S L+ AK + +E V LF L GI+ + ++TTLI
Sbjct: 63 ALTLFCDMAESHPLPSIVDFSRLLIAIAK-LNKYEAVISLFRHLEMLGISHDLYSFTTLI 121
Query: 496 SIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCL 555
R + A G+M++ P V++ +L+ FC++ A +L ++ +G
Sbjct: 122 DCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYE 181
Query: 556 PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL 615
PN+ Y +ID C+ ++ A + MK+ GI PDVVTY LI G G ++
Sbjct: 182 PNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARI 241
Query: 616 FGEM 619
+M
Sbjct: 242 LSDM 245
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 49/98 (50%)
Query: 503 KRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYT 562
K + A F +M +S P V ++ L+ + + +LF+ + +G +LY++T
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 563 CLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
LID FC+ + LA +M + G P +VT+ L+
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLV 156
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 124/522 (23%), Positives = 221/522 (42%), Gaps = 16/522 (3%)
Query: 111 RDIVGYCKCDDSFEQFSTL---LDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVG 167
R + + D SF F ++ L+L H + N +++ + LE VF +
Sbjct: 90 RGLKSFPDTDSSFSYFKSVAGNLNLVH-TTETCNYMLEALRVDGKLEEMAYVFDLMQKRI 148
Query: 168 LELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYT----IMMSCGDIRLAA 223
++ + + K L + E G + N ++Y +++ A
Sbjct: 149 IKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAM 208
Query: 224 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 283
E+ ++ G P++ TY + + GL + +D L++++ N + F I
Sbjct: 209 EVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVL 268
Query: 284 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 343
+ G +NEA E+L+ M PDV +Y +L++A C + + KP
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDR 328
Query: 344 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 403
V Y +L+ ++ + D + ++ M ++ P+ + ++ C+ G F EA
Sbjct: 329 VTYITLL----DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFD 384
Query: 404 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 463
L+ +QGI N ++YN +I + + ALEL M V P Y I +
Sbjct: 385 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG 444
Query: 464 KEQSNFEMVERLFTRLVKAGITFN-TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPD 522
K + +E F ++ GI N +L S+ R R +G + L PD
Sbjct: 445 KSGDSVSALET-FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYG-LKDIGLVPD 502
Query: 523 EVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 582
V+Y ++ + + E++ A L EM GC P++ LI+ K D +D A ++F
Sbjct: 503 SVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFM 562
Query: 583 EMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF-GEMKANC 623
MK + P VVTY L+A K+G+I E +LF G ++ C
Sbjct: 563 RMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGC 604
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 116/461 (25%), Positives = 197/461 (42%), Gaps = 38/461 (8%)
Query: 199 MET-GPLPNIHTYTI----MMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
MET G PN++T+TI + G I A EIL ++ G P VVTY I LC
Sbjct: 249 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
+D A ++ K+ H + + ++ F ++ + EM+ PDV ++ +
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQ----------- 360
L++A CK G+ I P++ Y +LI LL ++L
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428
Query: 361 ------------QLYDKS------LEVYNSMLQNAIRPNTIICNHILRVHCREGQFREAL 402
Y KS LE + M I PN + CN L + G+ REA
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 488
Query: 403 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 462
+ + G+ + +YN ++ K A++L+ M++ P V+ ++LI+
Sbjct: 489 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTL 548
Query: 463 AKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPD 522
K + ++F R+ + + TY TL++ G+ K +A F M+Q P+
Sbjct: 549 YK-ADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607
Query: 523 EVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 582
+++ L C E+ +A + +M +GC+P+++TY +I G K + A F
Sbjct: 608 TITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFH 667
Query: 583 EMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANC 623
+MK K ++PD VT L+ K I + K+ NC
Sbjct: 668 QMK-KLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNC 707
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 161/687 (23%), Positives = 257/687 (37%), Gaps = 127/687 (18%)
Query: 63 SLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALL---RD------- 112
S N + K+F S +E G V F I++ AG E F L RD
Sbjct: 339 SDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNL 398
Query: 113 ------IVGYCKC---DDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVS 162
I G + DD+ E F + L + + V I + + A + F
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 458
Query: 163 AKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GD 218
K G+ +I +CN L L L + G +P+ TY +MM C G+
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518
Query: 219 IRLAAEILGKIYRSGGNP-----------------------------------TVVTYGT 243
I A ++L ++ +G P TVVTY T
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 244 YIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSR 303
+ GL + G + A +L + K P N+ FN + C+ V AL++L +M
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Query: 304 TFPDVYSYNMLLNAFCKKGDVXXXX---------XXXXXXXXCQIKPSIVNY-------- 346
PDV++YN ++ K G V C + P +V
Sbjct: 639 CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYK 698
Query: 347 --TSLILLCKNK------------LKGQQLYDKSLEVYNSMLQNAI-RPNTIICNHILRV 391
T+ + C ++ + + D ++ ++ N I R I I+R
Sbjct: 699 IITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRY 758
Query: 392 HCREGQFREALTLLEDFHEQ-GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 450
C+ A TL E F + G+ +YN +I + + ++A ++ ++ +P
Sbjct: 759 SCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIP 818
Query: 451 GVVNYSTLISGFAKE---QSNFEMVERLFTR---------------LVKAG--------- 483
V Y+ L+ + K FE+ + + T LVKAG
Sbjct: 819 DVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLY 878
Query: 484 --------ITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCN 535
+ TY LI ++ + ++A F M+ P+ Y LI F
Sbjct: 879 YDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGK 938
Query: 536 IREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVT 595
E + ACALF+ M + G P+L TY+ L+D C + +D F E+K G+ PDVV
Sbjct: 939 AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVC 998
Query: 596 YTVLIAWYHKHGRIGEKNKLFGEMKAN 622
Y ++I K R+ E LF EMK +
Sbjct: 999 YNLIINGLGKSHRLEEALVLFNEMKTS 1025
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 122/518 (23%), Positives = 218/518 (42%), Gaps = 17/518 (3%)
Query: 118 KCDDSFEQFSTLLDLPHHSVLV--FNVLIKVFASNSM---LEHAHQVFVSAKNVGLELHI 172
+ D E+ + + DL ++ N + +F S S+ L+ A + G L+
Sbjct: 129 RVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNA 188
Query: 173 RSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYT-IMMSCG---DIRLAAEILGK 228
S N L+ L ++ G P++ TY+ +M+ G DI +L +
Sbjct: 189 YSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKE 248
Query: 229 IYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGA 288
+ G P V T+ IR L G ++ A+++++++ + + + +I C
Sbjct: 249 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308
Query: 289 VNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTS 348
++ A EV E+MK+ R PD +Y LL+ F D+ P +V +T
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368
Query: 349 LI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 407
L+ LCK G+ + +L N NT+IC +LRVH + +AL L +
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICG-LLRVH----RLDDALELFGN 423
Query: 408 FHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS 467
G+ Y+Y I K ALE +M + + P +V + + AK
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483
Query: 468 NFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYT 527
+ E +++F L G+ ++ TY ++ + + + +A EM+++ PD +
Sbjct: 484 DRE-AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVN 542
Query: 528 ALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK 587
+LI ++ A +F M + P + TY L+ G K I A +LF+ M +K
Sbjct: 543 SLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQK 602
Query: 588 GIFPDVVTYTVLIAWYHKHGRIGEKNK-LFGEMKANCI 624
G P+ +T+ L K+ + K LF M C+
Sbjct: 603 GCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCV 640
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 124/257 (48%), Gaps = 1/257 (0%)
Query: 369 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 428
V++ M + I+ +T I + +G ++A L E G LN YSYN +IH++
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199
Query: 429 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNT 488
K + A+E+ RM+ P + YS+L+ G K + + + V L + G+ N
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRR-DIDSVMGLLKEMETLGLKPNV 258
Query: 489 KTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQE 548
T+T I + GR K ++AY M PD V+YT LI C R+++ A +F++
Sbjct: 259 YTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEK 318
Query: 549 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 608
M P+ TY L+D F +D Q + EM++ G PDVVT+T+L+ K G
Sbjct: 319 MKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGN 378
Query: 609 IGEKNKLFGEMKANCIL 625
GE M+ IL
Sbjct: 379 FGEAFDTLDVMRDQGIL 395
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 129/607 (21%), Positives = 244/607 (40%), Gaps = 70/607 (11%)
Query: 78 VETHGFSHSVNYFRIIIHTFAMAGMHLE---VFALLRDI------VGY---CKC------ 119
++T G + ++ +++ A AG E +F L+DI V Y KC
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518
Query: 120 -DDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNF 177
D++ + S +++ V+V N LI ++ A ++F+ K + L+ + + N
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNT 578
Query: 178 LLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSG 233
LL L +++ G PN T+ + C ++ LA ++L K+ G
Sbjct: 579 LLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMG 638
Query: 234 GNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEAL 293
P V TY T I GL + G V A ++ ++P + ++ G + + +A
Sbjct: 639 CVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYP-DFVTLCTLLPGVVKASLIEDAY 697
Query: 294 EVL-------EEMKSSRTFPDV---------------YSYNMLLNAFCKKGDVX------ 325
+++ + ++ + D+ +S ++ N C+ GD
Sbjct: 698 KIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIR 757
Query: 326 ----------XXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQ 375
++P + Y LI L + + + +V+ +
Sbjct: 758 YSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLI----GGLLEADMIEIAQDVFLQVKS 813
Query: 376 NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 435
P+ N +L + + G+ E L ++ N ++N +I + K
Sbjct: 814 TGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDD 873
Query: 436 ALELM-PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTL 494
AL+L M R+ P Y LI G +K +E ++LF ++ G N Y L
Sbjct: 874 ALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYE-AKQLFEGMLDYGCRPNCAIYNIL 932
Query: 495 ISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGC 554
I+ G+ + A F M++ + PD +Y+ L+ C + ++ F+E+ G
Sbjct: 933 INGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGL 992
Query: 555 LPNLYTYTCLIDGFCKIDYIDLATQLFDEMK-RKGIFPDVVTYTVLIAWYHKHGRIGEKN 613
P++ Y +I+G K ++ A LF+EMK +GI PD+ TY LI G + E
Sbjct: 993 NPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAG 1052
Query: 614 KLFGEMK 620
K++ E++
Sbjct: 1053 KIYNEIQ 1059
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 141/335 (42%), Gaps = 42/335 (12%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
+N +I G + + A +V ++KS+ PDV +YN LL+A+ K G +
Sbjct: 788 YNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI----------- 836
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
D+ E+Y M + NTI N ++ +
Sbjct: 837 ----------------------------DELFELYKEMSTHECEANTITHNIVISGLVKA 868
Query: 396 GQFREALTLLEDF-HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 454
G +AL L D ++ + +Y +I + K A +L ML P
Sbjct: 869 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAI 928
Query: 455 YSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEM 514
Y+ LI+GF K + LF R+VK G+ + KTY+ L+ + + F E+
Sbjct: 929 YNILINGFGK-AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKEL 987
Query: 515 IQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM-SRIGCLPNLYTYTCLIDGFCKIDY 573
+S L PD V Y +I + A LF EM + G P+LYTY LI
Sbjct: 988 KESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGM 1047
Query: 574 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 608
++ A ++++E++R G+ P+V T+ LI Y G+
Sbjct: 1048 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGK 1082
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 162/414 (39%), Gaps = 9/414 (2%)
Query: 214 MSCGDIRL-AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPL- 271
M C + + +++ G + R P + + RGL D + + + L+ +
Sbjct: 57 MRCSVVSMKSSDFSGSMIRKSSKPDLSSSEEVTRGLKSFPDTDSSFSYFKSVAGNLNLVH 116
Query: 272 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 331
+ N ++ G + E V + M+ D +Y + + KG +
Sbjct: 117 TTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYAL 176
Query: 332 XXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 390
+ +Y LI LL K++ + ++EVY M+ RP+ + ++
Sbjct: 177 RKMREFGFVLNAYSYNGLIHLLLKSRFCTE-----AMEVYRRMILEGFRPSLQTYSSLMV 231
Query: 391 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 450
+ + LL++ G+ N Y++ I ++ + A E++ RM P
Sbjct: 232 GLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGP 291
Query: 451 GVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCR 510
VV Y+ LI + + + +F ++ + TY TL+ R
Sbjct: 292 DVVTYTVLIDALCTARK-LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQF 350
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
+ EM + PD V++T L+ C A M G LPNL+TY LI G +
Sbjct: 351 WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLR 410
Query: 571 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 624
+ +D A +LF M+ G+ P TY V I +Y K G + F +MK I
Sbjct: 411 VHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGI 464
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 144/337 (42%), Gaps = 13/337 (3%)
Query: 233 GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEA 292
G P + TY I GL E +++A + ++ + +N ++ + + G ++E
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 293 LEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ-IKPSIVNYTSLIL 351
E+ +EM + + ++N++++ K G+V + P+ Y LI
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI- 898
Query: 352 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 411
K +LY+ +++ ML RPN I N ++ + G+ A L + ++
Sbjct: 899 --DGLSKSGRLYEAK-QLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 955
Query: 412 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEM 471
G+ + +Y+ ++ +C L + + + P VV Y+ +I+G K E
Sbjct: 956 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSH-RLEE 1014
Query: 472 VERLFTRL-VKAGITFNTKTYTTLI---SIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYT 527
LF + GIT + TY +LI I G + K Y E+ ++ L P+ ++
Sbjct: 1015 ALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIY---NEIQRAGLEPNVFTFN 1071
Query: 528 ALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCL 564
ALI + + A A++Q M G PN TY L
Sbjct: 1072 ALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 178/386 (46%), Gaps = 10/386 (2%)
Query: 235 NPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE 294
+P VVTY T+I C+ G + +A K + N F +I G+C+ G + A+
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 295 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 354
+ +EM+ R +V +Y L++ FCKKG++ +++P+ + YT++I
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTII---- 275
Query: 355 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 414
+ + D +++ ML +R + I+ C G+ +EA ++ED + +
Sbjct: 276 DGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLV 335
Query: 415 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVER 474
+ + +++ K K A+ + ++++R P VV ST+I G AK E +
Sbjct: 336 PDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAI-- 393
Query: 475 LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFC 534
++ + KA N YT LI + + F ++ ++ L PD+ YT+ IA C
Sbjct: 394 VYFCIEKA----NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLC 449
Query: 535 NIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 594
+ A L M + G L +L YT LI G + A Q+FDEM GI PD
Sbjct: 450 KQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSA 509
Query: 595 TYTVLIAWYHKHGRIGEKNKLFGEMK 620
+ +LI Y K G + + L +M+
Sbjct: 510 VFDLLIRAYEKEGNMAAASDLLLDMQ 535
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 205/441 (46%), Gaps = 22/441 (4%)
Query: 202 GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGG---NPTVVTYGTYIRGLCECGYV 254
G P++ +Y ++ GDIR A+ +L + S G P +V++ + G + +
Sbjct: 86 GCEPDVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKML 145
Query: 255 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 314
D + + K N ++ I FC+ G + AL+ MK P+V ++ L
Sbjct: 146 DEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCL 204
Query: 315 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSM 373
++ +CK GD+ ++ ++V YT+LI CK KG+ ++ E+Y+ M
Sbjct: 205 IDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCK---KGEM--QRAEEMYSRM 259
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
+++ + PN+++ I+ + G A+ L QG+ L+ +Y II +C
Sbjct: 260 VEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKL 319
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTT 493
K A E++ M K +++P +V ++T+++ + K + ++ +L++ G + +T
Sbjct: 320 KEATEIVEDMEKSDLVPDMVIFTTMMNAYFK-SGRMKAAVNMYHKLIERGFEPDVVALST 378
Query: 494 LISIHGRTRKRHKAYCRFGEMIQSCL-CPDEVSYTALIAVFCNIREMNVACALFQEMSRI 552
+I + + H+A F C+ ++V YT LI C + LF ++S
Sbjct: 379 MIDGIAKNGQLHEAIVYF------CIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEA 432
Query: 553 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 612
G +P+ + YT I G CK + A +L M ++G+ D++ YT LI G + E
Sbjct: 433 GLVPDKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEA 492
Query: 613 NKLFGEMKANCILLDDGIKKL 633
++F EM + I D + L
Sbjct: 493 RQVFDEMLNSGISPDSAVFDL 513
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 184/412 (44%), Gaps = 13/412 (3%)
Query: 219 IRLAAEILGKIYRSGGNPTVVTYGTYIRGL--CECGYVDVAHKLVRKLHCKLHPLNSHCF 276
+R A + L ++ +S P T +I L CG + + K + L + + + F
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSL--KFLAYLVSRGYTPHRSSF 59
Query: 277 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 336
N+V+ C+ G V A +++ M PDV SYN L++ C+ GD+
Sbjct: 60 NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRA 119
Query: 337 CQ---IKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 393
KP IV++ SL N ++ D+ VY ++ PN + + + C
Sbjct: 120 SHGFICKPDIVSFNSLF----NGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFC 174
Query: 394 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 453
+ G+ + AL ++ N ++ +I CK ++A+ L M + + VV
Sbjct: 175 KSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVV 234
Query: 454 NYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE 513
Y+ LI GF K + + E +++R+V+ + N+ YTT+I + A +
Sbjct: 235 TYTALIDGFCK-KGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAK 293
Query: 514 MIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 573
M+ + D +Y +I+ C ++ A + ++M + +P++ +T +++ + K
Sbjct: 294 MLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYFKSGR 353
Query: 574 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 625
+ A ++ ++ +G PDVV + +I K+G++ E F KAN ++
Sbjct: 354 MKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVM 405
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 166/397 (41%), Gaps = 47/397 (11%)
Query: 205 PNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 260
PN+ TY+ + G+++LA + + R +P VVT+ I G C+ G ++VA L
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 261 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 320
+++ LN + A+I GFC++G + A E+ M R P+ Y +++ F +
Sbjct: 221 YKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQ 280
Query: 321 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKN-KLKGQQLYDKSLEVYNSMLQNAI 378
+GD ++ I Y +I LC N KLK ++ E+ M ++ +
Sbjct: 281 RGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLK------EATEIVEDMEKSDL 334
Query: 379 RPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN------------------------ 414
P+ +I ++ + + G+ + A+ + E+G
Sbjct: 335 VPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIV 394
Query: 415 ------LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN 468
N Y +I +CKE L ++ + ++P Y++ I+G K Q N
Sbjct: 395 YFCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCK-QGN 453
Query: 469 FEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCR--FGEMIQSCLCPDEVSY 526
+L TR+V+ G+ + YTTLI +G K R F EM+ S + PD +
Sbjct: 454 LVDAFKLKTRMVQEGLLLDLLAYTTLI--YGLASKGLMVEARQVFDEMLNSGISPDSAVF 511
Query: 527 TALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTC 563
LI + M A L +M R G + + C
Sbjct: 512 DLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVSDADC 548
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 149/349 (42%), Gaps = 58/349 (16%)
Query: 289 VNEALEVLEEMKSSRTFPDVYSYN----MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 344
V EAL+ L ++ S PD ++ N L+N+ C P
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCG----ILSLKFLAYLVSRGYTPHRS 57
Query: 345 NYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 403
++ S++ +CK GQ + + ++ +SM + P+ I N ++ HCR G R A
Sbjct: 58 SFNSVVSFVCK---LGQVKFAE--DIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASL 112
Query: 404 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 463
+LE ICK P +V++++L +GF+
Sbjct: 113 VLESLRASH------------GFICK--------------------PDIVSFNSLFNGFS 140
Query: 464 KEQSNFEMVERLFTRLVKAGITF-----NTKTYTTLISIHGRTRKRHKAYCRFGEMIQSC 518
K +M++ +F V G+ N TY+T I ++ + A F M +
Sbjct: 141 K----MKMLDEVF---VYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDA 193
Query: 519 LCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLAT 578
L P+ V++T LI +C ++ VA +L++EM R+ N+ TYT LIDGFCK + A
Sbjct: 194 LSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAE 253
Query: 579 QLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
+++ M + P+ + YT +I + + G K +M + LD
Sbjct: 254 EMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLD 302
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 145/609 (23%), Positives = 246/609 (40%), Gaps = 63/609 (10%)
Query: 57 VVRVIKSLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGY 116
V++++KS A F S G++HS + I+ + M V ++ I
Sbjct: 13 VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQ 72
Query: 117 -CKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNV-GLELHIRS 174
CKCD+ V +IK + NSM + A VF + + G E IRS
Sbjct: 73 ECKCDED----------------VALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRS 116
Query: 175 CNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIM--MSCG--DIRLAAEILGKIY 230
N LL G PN+ TY ++ MSC + A L ++
Sbjct: 117 YNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMW 176
Query: 231 RSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVN 290
+ G P V +Y T I L + G +D A +L ++ + + C+N +I GF +
Sbjct: 177 KEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHK 236
Query: 291 EALEVLEEM-KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSL 349
A+E+ + + + S +P+V ++N++++ K G V + + + Y+SL
Sbjct: 237 TAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSL 296
Query: 350 ILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF- 408
I + L DK+ V+N + + + + N +L CR G+ +E+L L
Sbjct: 297 I----HGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIME 352
Query: 409 HEQGINLNQY---------------------------------SYNEIIHMICKESYPKM 435
H+ +N+ Y +Y IH +C Y
Sbjct: 353 HKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNK 412
Query: 436 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
AL +M + V Y+++I K++ E L + K G+ N+ LI
Sbjct: 413 ALGVMQEVESSGGHLDVYAYASIIDCLCKKK-RLEEASNLVKEMSKHGVELNSHVCNALI 471
Query: 496 SIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCL 555
R + +A EM ++ P VSY LI C + A A +EM G
Sbjct: 472 GGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWK 531
Query: 556 PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL 615
P+L TY+ L+ G C+ IDLA +L+ + + G+ DV+ + +LI G++ + +
Sbjct: 532 PDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTV 591
Query: 616 FGEMK-ANC 623
M+ NC
Sbjct: 592 MANMEHRNC 600
Score = 139 bits (350), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 132/570 (23%), Positives = 241/570 (42%), Gaps = 70/570 (12%)
Query: 38 FNLSSVSPVPETNRELFHVVVRV-IKSLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHT 96
F + V+P N + ++V++++ K ++ AR F W+ GF V + +I+
Sbjct: 140 FETAGVAP----NLQTYNVLIKMSCKKKEFEKAR--GFLDWMWKEGFKPDVFSYSTVIND 193
Query: 97 FAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEH 155
A AG K DD+ E F + + V +N+LI F + E
Sbjct: 194 LAKAG----------------KLDDALELFDEMSERGVAPDVTCYNILIDGF----LKEK 233
Query: 156 AHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS 215
H+ +EL R L ++ PN+ T+ IM+S
Sbjct: 234 DHKT-------AMELWDR-----------------------LLEDSSVYPNVKTHNIMIS 263
Query: 216 ----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPL 271
CG + +I ++ ++ + TY + I GLC+ G VD A + +L + +
Sbjct: 264 GLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASI 323
Query: 272 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 331
+ +N ++ GFC+ G + E+LE+ M+ + ++ SYN+L+ + G +
Sbjct: 324 DVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGLLENGKIDEATMIW 382
Query: 332 XXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 390
Y I LC N +K+L V + + + I+
Sbjct: 383 RLMPAKGYAADKTTYGIFIHGLCVN-----GYVNKALGVMQEVESSGGHLDVYAYASIID 437
Query: 391 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 450
C++ + EA L+++ + G+ LN + N +I + ++S A + M K P
Sbjct: 438 CLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRP 497
Query: 451 GVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCR 510
VV+Y+ LI G K F +++ G + KTY+ L+ R RK A
Sbjct: 498 TVVSYNILICGLCK-AGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALEL 556
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
+ + +QS L D + + LI C++ +++ A + M C NL TY L++GF K
Sbjct: 557 WHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFK 616
Query: 571 IDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
+ + AT ++ M + G+ PD+++Y ++
Sbjct: 617 VGDSNRATVIWGYMYKMGLQPDIISYNTIM 646
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 123/555 (22%), Positives = 225/555 (40%), Gaps = 36/555 (6%)
Query: 93 IIHTF---AMAGMHLEVFALLRDIVG--------------------YCKCDDSFEQFSTL 129
+I T+ +M L+VF +R+I G + K + F F T
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETA 143
Query: 130 LDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXX 189
P+ + +NVLIK+ E A G + + S + ++ L
Sbjct: 144 GVAPN--LQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLD 201
Query: 190 XXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYR-SGGNPTVVTYGTY 244
+ E G P++ Y I++ D + A E+ ++ S P V T+
Sbjct: 202 DALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIM 261
Query: 245 IRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRT 304
I GL +CG VD K+ ++ + + ++++IHG C G V++A V E+ +
Sbjct: 262 ISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKA 321
Query: 305 FPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYD 364
DV +YN +L FC+ G + + VN S +L K L+ ++ D
Sbjct: 322 SIDVVTYNTMLGGFCRCGKIKESLELWRIME----HKNSVNIVSYNILIKGLLENGKI-D 376
Query: 365 KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEII 424
++ ++ M + + C G +AL ++++ G +L+ Y+Y II
Sbjct: 377 EATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASII 436
Query: 425 HMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGI 484
+CK+ + A L+ M K V + LI G ++ S + K G
Sbjct: 437 DCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRD-SRLGEASFFLREMGKNGC 495
Query: 485 TFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACA 544
+Y LI + K +A EM+++ PD +Y+ L+ C R++++A
Sbjct: 496 RPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALE 555
Query: 545 LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYH 604
L+ + + G ++ + LI G C + +D A + M+ + ++VTY L+ +
Sbjct: 556 LWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFF 615
Query: 605 KHGRIGEKNKLFGEM 619
K G ++G M
Sbjct: 616 KVGDSNRATVIWGYM 630
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 101/467 (21%), Positives = 185/467 (39%), Gaps = 62/467 (13%)
Query: 208 HTYTIMMSCGDIRLAAEILGKIYRSGGNP-TVVTYGTYIRGLCECGYVDVAHKLVRKLHC 266
H ++ S + R A + R G + V Y +R L E V+ ++V +
Sbjct: 12 HVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRS 71
Query: 267 KLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSS-RTFPDVYSYNMLLNAFCKKGDVX 325
+ + +VI + + ++AL+V + M+ P + SYN LLNAF +
Sbjct: 72 QECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWV 131
Query: 326 XXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTII 384
+ P++ Y LI + CK K ++K+ + M + +P+
Sbjct: 132 KVESLFAYFETAGVAPNLQTYNVLIKMSCKKKE-----FEKARGFLDWMWKEGFKPDVFS 186
Query: 385 CNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRML 444
+ ++ + G+ +AL L ++ E+G+ + YN +I KE K A+EL R+L
Sbjct: 187 YSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL 246
Query: 445 K-RNVLPGVVNYSTLISGFAK----------------------------------EQSNF 469
+ +V P V ++ +ISG +K + N
Sbjct: 247 EDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNV 306
Query: 470 EMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCL---------C 520
+ E +F L + + + TY T++ +CR G++ +S
Sbjct: 307 DKAESVFNELDERKASIDVVTYNTMLG----------GFCRCGKIKESLELWRIMEHKNS 356
Query: 521 PDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQL 580
+ VSY LI +++ A +++ M G + TY I G C Y++ A +
Sbjct: 357 VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGV 416
Query: 581 FDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
E++ G DV Y +I K R+ E + L EM + + L+
Sbjct: 417 MQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELN 463
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 90/231 (38%), Gaps = 15/231 (6%)
Query: 419 SYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV---ERL 475
S ++ ++ E P+ A L + PG + + + + S MV R+
Sbjct: 9 SPKHVLKLLKSEKNPRAAFALFDSATRH---PGYAHSAVVYHHILRRLSETRMVNHVSRI 65
Query: 476 FTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLC-PDEVSYTALIAVFC 534
+ + ++I +G+ +A F M + C P SY L+ F
Sbjct: 66 VELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFV 125
Query: 535 NIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 594
++ +LF G PNL TY LI CK + A D M ++G PDV
Sbjct: 126 EAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVF 185
Query: 595 TYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD--------DGIKKLQDPK 637
+Y+ +I K G++ + +LF EM + D DG K +D K
Sbjct: 186 SYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHK 236
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 235/504 (46%), Gaps = 52/504 (10%)
Query: 123 FEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCL 182
F++FS S VF++++KV+A ++++A VF + N G + SCN LL L
Sbjct: 148 FKEFS-------FSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNL 200
Query: 183 XXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGG-NPT 237
++ P++ T +I+++ G++ A + S G
Sbjct: 201 VRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELN 260
Query: 238 VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 297
VVTY + I G G V+ +++R + + N + ++I G+C++G + EA V E
Sbjct: 261 VVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFE 320
Query: 298 EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKL 357
+K + D + Y +L++ +C+ G QI+ ++
Sbjct: 321 LLKEKKLVADQHMYGVLMDGYCRTG---------------QIRDAV-------------- 351
Query: 358 KGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQ 417
V+++M++ +R NT ICN ++ +C+ GQ EA + ++ + +
Sbjct: 352 ----------RVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDH 401
Query: 418 YSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFT 477
++YN ++ C+ Y AL+L +M ++ V+P V+ Y+ L+ G+++ + F V L+
Sbjct: 402 HTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGA-FHDVLSLWK 460
Query: 478 RLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIR 537
++K G+ + + +TL+ + ++A + ++ L D ++ +I+ C +
Sbjct: 461 MMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKME 520
Query: 538 EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYT 597
++N A + ++ C P + TY L G+ K+ + A + + M+RKGIFP + Y
Sbjct: 521 KVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYN 580
Query: 598 VLIAWYHKHGRIGEKNKLFGEMKA 621
LI+ K+ + + L E++A
Sbjct: 581 TLISGAFKYRHLNKVADLVIELRA 604
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 134/574 (23%), Positives = 237/574 (41%), Gaps = 47/574 (8%)
Query: 81 HGFSHSVNYFRIIIHTFAMAGMHLE---VFALLRD-------------IVGYCKCD---D 121
G S +V + +I + G+ E VF LL++ + GYC+ D
Sbjct: 290 RGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRD 349
Query: 122 SFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLK 180
+ ++++ + + N LI + + L A Q+F + L+ + N L+
Sbjct: 350 AVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVD 409
Query: 181 CLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCGDIRLAA-----EILGKIYRSGGN 235
+ + +P + TY I++ G R+ A + + + G N
Sbjct: 410 GYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLK-GYSRIGAFHDVLSLWKMMLKRGVN 468
Query: 236 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 295
++ T + L + G + A KL + + ++ N +I G C+ VNEA E+
Sbjct: 469 ADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEI 528
Query: 296 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 355
L+ + R P V +Y L + + K G++ I P+I Y +LI
Sbjct: 529 LDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLI---SG 585
Query: 356 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 415
K + L +K ++ + + P ++ C G +A + E+GI L
Sbjct: 586 AFKYRHL-NKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITL 644
Query: 416 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVL-PGVVNYSTLISGFA----KEQSNFE 470
N ++I + + + A L+ +++ ++L PG + + A K Q E
Sbjct: 645 NVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAE 704
Query: 471 MVERLFTR--LVKAGITFNTKTYTTLISIHG--RTRKRHKAYCRFGEMIQSC-LCPDEVS 525
VE + LV I +N ++I G + K A F +++ S PDE +
Sbjct: 705 SVENSTPKKLLVPNNIVYN-------VAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYT 757
Query: 526 YTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 585
YT LI ++N A L EM+ G +PN+ TY LI G CK+ +D A +L ++
Sbjct: 758 YTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLP 817
Query: 586 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
+KGI P+ +TY LI K G + E +L +M
Sbjct: 818 QKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKM 851
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 176/396 (44%), Gaps = 17/396 (4%)
Query: 206 NIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
N+ TY +++ GD+ +L + G + VVTY + I+G C+ G ++ A +
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 319
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
L K + H + ++ G+C+ G + +A+ V + M + N L+N +CK
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 379
Query: 322 GDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 380
G + +KP Y +L+ C+ D++L++ + M Q + P
Sbjct: 380 GQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCR-----AGYVDEALKLCDQMCQKEVVP 434
Query: 381 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
+ N +L+ + R G F + L+L + ++G+N ++ S + ++ + K A++L
Sbjct: 435 TVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLW 494
Query: 441 PRMLKRNVLPGVVNYSTLISGFAK-EQSN--FEMVERLFTRLVKAGITFNTKTYTTLISI 497
+L R +L + + +ISG K E+ N E+++ + K + +TY L
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAV----QTYQALSHG 550
Query: 498 HGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPN 557
+ + +A+ M + + P Y LI+ R +N L E+ G P
Sbjct: 551 YYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPT 610
Query: 558 LYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 593
+ TY LI G+C I ID A EM KGI +V
Sbjct: 611 VATYGALITGWCNIGMIDKAYATCFEMIEKGITLNV 646
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 114/525 (21%), Positives = 208/525 (39%), Gaps = 53/525 (10%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
+V+ +N LI +A +E +V G+ ++ + L+K
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 319
Query: 196 XXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
L E + + H Y ++M G IR A + + G + I G C+
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 379
Query: 252 GYVDVAHKLVRKLH-CKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 310
G + A ++ +++ L P + H +N ++ G+C+ G V+EAL++ ++M P V +
Sbjct: 380 GQLVEAEQIFSRMNDWSLKP-DHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMT 438
Query: 311 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVY 370
YN+LL + + G + ++ ++L+ L ++++++++
Sbjct: 439 YNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLL----EALFKLGDFNEAMKLW 494
Query: 371 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 430
++L + +TI N ++ C+ + EA +L++ + +Y + H K
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKV 554
Query: 431 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKT 490
K A + M ++ + P + Y+TLISG A + + V L L G+T T
Sbjct: 555 GNLKEAFAVKEYMERKGIFPTIEMYNTLISG-AFKYRHLNKVADLVIELRARGLTPTVAT 613
Query: 491 YTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQ--- 547
Y LI+ KAY EMI+ + + + + + +++ AC L Q
Sbjct: 614 YGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIV 673
Query: 548 ----------------EMSRIGCL-------------------PNLYTYTCLIDGFCKID 572
E S CL PN Y I G CK
Sbjct: 674 DFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAG 733
Query: 573 YIDLATQLFDEMKRKGIF-PDVVTYTVLIAWYHKHGRIGEKNKLF 616
++ A +LF ++ F PD TYT+LI H G+ NK F
Sbjct: 734 KLEDARKLFSDLLSSDRFIPDEYTYTILI---HGCAIAGDINKAF 775
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/427 (24%), Positives = 182/427 (42%), Gaps = 52/427 (12%)
Query: 210 YTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH 265
+ ++SC DI +++ K+ P VVT G I LC+ VD A ++ K+
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMR 356
Query: 266 CK------LHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMK-SSRTFPDVYSYNMLLNAF 318
K + +S FN +I G C+ G + EA E+L MK R P+ +YN L++ +
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGY 416
Query: 319 CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAI 378
C+ G + + + EV + M ++ I
Sbjct: 417 CRAGKL---------------------------------------ETAKEVVSRMKEDEI 437
Query: 379 RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 438
+PN + N I+ CR A+ D ++G+ N +Y +IH C S + A+
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 439 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIH 498
+ML+ P Y LISG + + + + + R+ +L + G + + Y LI +
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI-RVVEKLKEGGFSLDLLAYNMLIGLF 556
Query: 499 GRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNL 558
K Y +M + PD ++Y LI+ F ++ + ++M G P +
Sbjct: 557 CDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616
Query: 559 YTYTCLIDGFCKIDYIDLATQLFDEMK-RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFG 617
TY +ID +C + +D A +LF +M + P+ V Y +LI + K G G+ L
Sbjct: 617 TTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 676
Query: 618 EMKANCI 624
EMK +
Sbjct: 677 EMKMKMV 683
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 171/381 (44%), Gaps = 24/381 (6%)
Query: 272 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 331
NS I C+ N A ++L ++ ++T + +N LL+ + D+
Sbjct: 258 NSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLV 317
Query: 332 XXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQ------NAIRPNTII 384
+I+P +V LI LCK++ D++LEV+ M N I+ ++I
Sbjct: 318 LKMDEVKIRPDVVTLGILINTLCKSRR-----VDEALEVFEKMRGKRTDDGNVIKADSIH 372
Query: 385 CNHILRVHCREGQFREALTLLEDFH-EQGINLNQYSYNEIIHMICKESYPKMALELMPRM 443
N ++ C+ G+ +EA LL E+ N +YN +I C+ + A E++ RM
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 444 LKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRK 503
+ + P VV +T++ G + M F + K G+ N TY TLI
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHG-LNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 504 RHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTC 563
KA + +M+++ PD Y ALI+ C +R + A + +++ G +L Y
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 564 LIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANC 623
LI FC + + ++ +M+++G PD +TY LI+++ KH ++ +M+
Sbjct: 552 LIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR--- 608
Query: 624 ILLDDGIKKLQDPKLVQFKNV 644
+DG+ DP + + V
Sbjct: 609 ---EDGL----DPTVTTYGAV 622
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 143/329 (43%), Gaps = 9/329 (2%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
+ + +N LI + LE A +V K ++ ++ + N ++ +
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 196 XXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
+ + G N+ TY ++ S ++ A K+ +G +P Y I GLC+
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 252 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 311
A ++V KL L+ +N +I FC + + E+L +M+ PD +Y
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITY 584
Query: 312 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYN 371
N L++ F K D + P++ Y ++I + D++L+++
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI----DAYCSVGELDEALKLFK 640
Query: 372 SM-LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 430
M L + + PNT+I N ++ + G F +AL+L E+ + + N +YN + + ++
Sbjct: 641 DMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEK 700
Query: 431 SYPKMALELMPRMLKRNVLPGVVNYSTLI 459
+ + L+LM M++++ P + L+
Sbjct: 701 TQGETLLKLMDEMVEQSCEPNQITMEILM 729
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 152/374 (40%), Gaps = 51/374 (13%)
Query: 237 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL 296
TVV IR G V+ + + +L + NS N V+ + G V++A +VL
Sbjct: 151 TVVATNLLIRWFGRMGMVNQSVLVYERLDSNMK--NSQVRNVVVDVLLRNGLVDDAFKVL 208
Query: 297 EEM--KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 354
+EM K S P+ + +++L+ K LL +
Sbjct: 209 DEMLQKESVFPPNRITADIVLHEVWKGR----------------------------LLTE 240
Query: 355 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 414
K+ + + + + + PN++ + C+ + A +L D +
Sbjct: 241 EKI---------IALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTP 291
Query: 415 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ---SNFEM 471
L +N ++ + + +L+ +M + + P VV LI+ K + E+
Sbjct: 292 LEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEV 351
Query: 472 VERLFTRLVKAG--ITFNTKTYTTLIS---IHGRTRKRHKAYCRFGEMIQSCLCPDEVSY 526
E++ + G I ++ + TLI GR ++ + R ++ + C P+ V+Y
Sbjct: 352 FEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM-KLEERC-APNAVTY 409
Query: 527 TALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 586
LI +C ++ A + M PN+ T ++ G C+ +++A F +M++
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK 469
Query: 587 KGIFPDVVTYTVLI 600
+G+ +VVTY LI
Sbjct: 470 EGVKGNVVTYMTLI 483
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 142 bits (357), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 127/507 (25%), Positives = 204/507 (40%), Gaps = 51/507 (10%)
Query: 131 DLPHHSVLVF----NVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXX 186
++ H S VF N I V S E A ++ K +G L + + + L
Sbjct: 34 EMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVK 93
Query: 187 XXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYG 242
+ G +P+I + + + + A + + + G P VV+Y
Sbjct: 94 KFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYT 153
Query: 243 TYIRGLCECGYVDVAHKLVRKL-HCKLHPLNSHCFNAVIHGFCQRGAVNEALE-VLEEMK 300
I GL G V A ++ + + P N C A++ G C V+ A E V EE+K
Sbjct: 154 ILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKAC-AALVVGLCHARKVDLAYEMVAEEIK 212
Query: 301 SSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQ 360
S+R YN L++ FCK G + +P +V Y L+
Sbjct: 213 SARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLL---------N 263
Query: 361 QLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSY 420
YD N+ML+ A EG E + GI L+ YSY
Sbjct: 264 YYYD------NNMLKRA-----------------EGVMAEMV-------RSGIQLDAYSY 293
Query: 421 NEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLV 480
N+++ C+ S+P M + ++ VV+YSTLI F + SN RLF +
Sbjct: 294 NQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCR-ASNTRKAYRLFEEMR 352
Query: 481 KAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMN 540
+ G+ N TYT+LI R A +M + L PD + YT ++ C ++
Sbjct: 353 QKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVD 412
Query: 541 VACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
A +F +M P+ +Y LI G C+ + A +LF++MK K PD +T+ +I
Sbjct: 413 KAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFII 472
Query: 601 AWYHKHGRIGEKNKLFGEMKANCILLD 627
+ ++ K++ +M LD
Sbjct: 473 GGLIRGKKLSAAYKVWDQMMDKGFTLD 499
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 174/383 (45%), Gaps = 18/383 (4%)
Query: 198 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
+++ G P++ +YTI+++ G + A EI + RSG +P + GLC
Sbjct: 140 MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARK 199
Query: 254 VDVAHKLV-RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 312
VD+A+++V ++ L++ +NA+I GFC+ G + +A + M PD+ +YN
Sbjct: 200 VDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYN 259
Query: 313 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNS 372
+LLN + + I+ +Y L LK + YN
Sbjct: 260 VLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQL-------LKRHCRVSHPDKCYNF 312
Query: 373 MLQNAIRP----NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 428
M++ + P + + + ++ CR R+A L E+ ++G+ +N +Y +I
Sbjct: 313 MVKE-MEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFL 371
Query: 429 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNT 488
+E +A +L+ +M + + P + Y+T++ K N + +F +++ IT +
Sbjct: 372 REGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCK-SGNVDKAYGVFNDMIEHEITPDA 430
Query: 489 KTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQE 548
+Y +LIS R+ + +A F +M CPDE+++ +I ++++ A ++ +
Sbjct: 431 ISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQ 490
Query: 549 MSRIGCLPNLYTYTCLIDGFCKI 571
M G + LI C +
Sbjct: 491 MMDKGFTLDRDVSDTLIKASCSM 513
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 123/267 (46%), Gaps = 2/267 (0%)
Query: 362 LYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYN 421
+ D +++V++ M ++ R + N + V RE +F A + D G +L ++Y+
Sbjct: 24 MIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYS 83
Query: 422 EIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVK 481
I +CK + L+ M +P + ++ + +E V+ F +V+
Sbjct: 84 RFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFC-MVQ 142
Query: 482 AGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNV 541
G + +YT LI+ R K A + MI+S + PD + AL+ C+ R++++
Sbjct: 143 RGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDL 202
Query: 542 ACALF-QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
A + +E+ + Y LI GFCK I+ A L M + G PD+VTY VL+
Sbjct: 203 AYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLL 262
Query: 601 AWYHKHGRIGEKNKLFGEMKANCILLD 627
+Y+ + + + EM + I LD
Sbjct: 263 NYYYDNNMLKRAEGVMAEMVRSGIQLD 289
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/345 (21%), Positives = 141/345 (40%), Gaps = 44/345 (12%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
+ + I + G ++ A++V +EM+ S + YN + +
Sbjct: 12 YRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVR--------------- 56
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
+ ++ + +Y M + + C+
Sbjct: 57 ------------------------ESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKV 92
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
+F LL D G + +++N + ++C+E+ A++ M++R P VV+Y
Sbjct: 93 KKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSY 152
Query: 456 STLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMI 515
+ LI+G + + VE ++ ++++G++ + K L+ RK AY E I
Sbjct: 153 TILINGLFRAGKVTDAVE-IWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEI 211
Query: 516 QSCLCP-DEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 574
+S V Y ALI+ FC + A AL MS+IGC P+L TY L++ + + +
Sbjct: 212 KSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNML 271
Query: 575 DLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
A + EM R GI D +Y L+ +H R+ +K + M
Sbjct: 272 KRAEGVMAEMVRSGIQLDAYSYNQLL---KRHCRVSHPDKCYNFM 313
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 110/263 (41%), Gaps = 10/263 (3%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
++ +NVL+ + N+ML+ A V G++L S N LLK
Sbjct: 254 DLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFM 313
Query: 196 XXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
ME ++ +Y+ ++ + R A + ++ + G VVTY + I+
Sbjct: 314 VKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLRE 373
Query: 252 GYVDVAHKLVRKL-HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 310
G VA KL+ ++ L P + + ++ C+ G V++A V +M PD S
Sbjct: 374 GNSSVAKKLLDQMTELGLSP-DRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAIS 432
Query: 311 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVY 370
YN L++ C+ G V + P + + +I ++G++L + +V+
Sbjct: 433 YNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFII---GGLIRGKKL-SAAYKVW 488
Query: 371 NSMLQNAIRPNTIICNHILRVHC 393
+ M+ + + + +++ C
Sbjct: 489 DQMMDKGFTLDRDVSDTLIKASC 511
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 182/427 (42%), Gaps = 52/427 (12%)
Query: 210 YTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH 265
+ ++SC DI +++ K+ P VVT G I LC+ VD A ++ ++
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 266 CK------LHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMK-SSRTFPDVYSYNMLLNAF 318
K + +S FN +I G C+ G + EA E+L MK R P+ +YN L++ +
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 319 CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAI 378
C+ G + + + EV + M ++ I
Sbjct: 417 CRAGKL---------------------------------------ETAKEVVSRMKEDEI 437
Query: 379 RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 438
+PN + N I+ CR A+ D ++G+ N +Y +IH C S + A+
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 439 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIH 498
+ML+ P Y LISG + + + + + R+ +L + G + + Y LI +
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI-RVVEKLKEGGFSLDLLAYNMLIGLF 556
Query: 499 GRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNL 558
K Y +M + PD ++Y LI+ F ++ + ++M G P +
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616
Query: 559 YTYTCLIDGFCKIDYIDLATQLFDEMK-RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFG 617
TY +ID +C + +D A +LF +M + P+ V Y +LI + K G G+ L
Sbjct: 617 TTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 676
Query: 618 EMKANCI 624
EMK +
Sbjct: 677 EMKMKMV 683
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 171/381 (44%), Gaps = 24/381 (6%)
Query: 272 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 331
NS I C+ N A ++L ++ ++T + +N LL+ + D+
Sbjct: 258 NSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLV 317
Query: 332 XXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQ------NAIRPNTII 384
+I+P +V LI LCK++ D++LEV+ M N I+ ++I
Sbjct: 318 LKMDEVKIRPDVVTLGILINTLCKSRR-----VDEALEVFEQMRGKRTDDGNVIKADSIH 372
Query: 385 CNHILRVHCREGQFREALTLLEDFH-EQGINLNQYSYNEIIHMICKESYPKMALELMPRM 443
N ++ C+ G+ +EA LL E+ N +YN +I C+ + A E++ RM
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 444 LKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRK 503
+ + P VV +T++ G + M F + K G+ N TY TLI
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHG-LNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 504 RHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTC 563
KA + +M+++ PD Y ALI+ C +R + A + +++ G +L Y
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 564 LIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANC 623
LI FC + + ++ +M+++G PD +TY LI+++ KH ++ +M+
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR--- 608
Query: 624 ILLDDGIKKLQDPKLVQFKNV 644
+DG+ DP + + V
Sbjct: 609 ---EDGL----DPTVTTYGAV 622
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 137/315 (43%), Gaps = 9/315 (2%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
+ + +N LI + LE A +V K ++ ++ + N ++ +
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 196 XXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
+ + G N+ TY ++ S ++ A K+ +G +P Y I GLC+
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 252 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 311
A ++V KL L+ +N +I FC + + E+L +M+ PD +Y
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITY 584
Query: 312 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYN 371
N L++ F K D + P++ Y ++I + D++L+++
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI----DAYCSVGELDEALKLFK 640
Query: 372 SM-LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 430
M L + + PNT+I N ++ + G F +AL+L E+ + + N +YN + + ++
Sbjct: 641 DMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEK 700
Query: 431 SYPKMALELMPRMLK 445
+ + L+LM M++
Sbjct: 701 TQGETLLKLMDEMVE 715
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 154/374 (41%), Gaps = 51/374 (13%)
Query: 237 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL 296
T+V IR G V+ + + +L + NS N V+ + G V++A +VL
Sbjct: 151 TIVATKLLIRWFGRMGMVNQSVLVYERLDSNMK--NSQVRNVVVDVLLRNGLVDDAFKVL 208
Query: 297 EEM--KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 354
+EM K S P+ + +++L+ K+ LL +
Sbjct: 209 DEMLQKESVFPPNRITADIVLHEVWKER----------------------------LLTE 240
Query: 355 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 414
K+ + + + + + PN++ + C+ + A +L D +
Sbjct: 241 EKI---------IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTP 291
Query: 415 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ---SNFEM 471
L +N ++ + + +L+ +M + + P VV LI+ K + E+
Sbjct: 292 LEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEV 351
Query: 472 VERLFTRLVKAG--ITFNTKTYTTLIS---IHGRTRKRHKAYCRFGEMIQSCLCPDEVSY 526
E++ + G I ++ + TLI GR ++ + R ++ + C+ P+ V+Y
Sbjct: 352 FEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM-KLEERCV-PNAVTY 409
Query: 527 TALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 586
LI +C ++ A + M PN+ T ++ G C+ +++A F +M++
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK 469
Query: 587 KGIFPDVVTYTVLI 600
+G+ +VVTY LI
Sbjct: 470 EGVKGNVVTYMTLI 483
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/427 (24%), Positives = 182/427 (42%), Gaps = 52/427 (12%)
Query: 210 YTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH 265
+ ++SC DI +++ K+ P VVT G I LC+ VD A ++ ++
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 266 CK------LHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMK-SSRTFPDVYSYNMLLNAF 318
K + +S FN +I G C+ G + EA E+L MK R P+ +YN L++ +
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 319 CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAI 378
C+ G + + + EV + M ++ I
Sbjct: 417 CRAGKL---------------------------------------ETAKEVVSRMKEDEI 437
Query: 379 RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 438
+PN + N I+ CR A+ D ++G+ N +Y +IH C S + A+
Sbjct: 438 KPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMY 497
Query: 439 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIH 498
+ML+ P Y LISG + + + + + R+ +L + G + + Y LI +
Sbjct: 498 WYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAI-RVVEKLKEGGFSLDLLAYNMLIGLF 556
Query: 499 GRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNL 558
K Y +M + PD ++Y LI+ F ++ + ++M G P +
Sbjct: 557 CDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTV 616
Query: 559 YTYTCLIDGFCKIDYIDLATQLFDEMK-RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFG 617
TY +ID +C + +D A +LF +M + P+ V Y +LI + K G G+ L
Sbjct: 617 TTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKE 676
Query: 618 EMKANCI 624
EMK +
Sbjct: 677 EMKMKMV 683
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 171/381 (44%), Gaps = 24/381 (6%)
Query: 272 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 331
NS I C+ N A ++L ++ ++T + +N LL+ + D+
Sbjct: 258 NSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLV 317
Query: 332 XXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQ------NAIRPNTII 384
+I+P +V LI LCK++ D++LEV+ M N I+ ++I
Sbjct: 318 LKMDEVKIRPDVVTLGILINTLCKSRR-----VDEALEVFEQMRGKRTDDGNVIKADSIH 372
Query: 385 CNHILRVHCREGQFREALTLLEDFH-EQGINLNQYSYNEIIHMICKESYPKMALELMPRM 443
N ++ C+ G+ +EA LL E+ N +YN +I C+ + A E++ RM
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 444 LKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRK 503
+ + P VV +T++ G + M F + K G+ N TY TLI
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHG-LNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 504 RHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTC 563
KA + +M+++ PD Y ALI+ C +R + A + +++ G +L Y
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 564 LIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANC 623
LI FC + + ++ +M+++G PD +TY LI+++ KH ++ +M+
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR--- 608
Query: 624 ILLDDGIKKLQDPKLVQFKNV 644
+DG+ DP + + V
Sbjct: 609 ---EDGL----DPTVTTYGAV 622
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 144/333 (43%), Gaps = 9/333 (2%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
+ + +N LI + LE A +V K ++ ++ + N ++ +
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 196 XXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
+ + G N+ TY ++ S ++ A K+ +G +P Y I GLC+
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 252 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 311
A ++V KL L+ +N +I FC + + E+L +M+ PD +Y
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITY 584
Query: 312 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYN 371
N L++ F K D + P++ Y ++I + D++L+++
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI----DAYCSVGELDEALKLFK 640
Query: 372 SM-LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 430
M L + + PNT+I N ++ + G F +AL+L E+ + + N +YN + + ++
Sbjct: 641 DMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEK 700
Query: 431 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 463
+ + L+LM M++++ P + L+ +
Sbjct: 701 TQGETLLKLMDEMVEQSCEPNQITMEILMERLS 733
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 154/374 (41%), Gaps = 51/374 (13%)
Query: 237 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL 296
T+V IR G V+ + + +L + NS N V+ + G V++A +VL
Sbjct: 151 TIVATKLLIRWFGRMGMVNQSVLVYERLDSNMK--NSQVRNVVVDVLLRNGLVDDAFKVL 208
Query: 297 EEM--KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 354
+EM K S P+ + +++L+ K+ LL +
Sbjct: 209 DEMLQKESVFPPNRITADIVLHEVWKER----------------------------LLTE 240
Query: 355 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 414
K+ + + + + + PN++ + C+ + A +L D +
Sbjct: 241 EKI---------IALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTP 291
Query: 415 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ---SNFEM 471
L +N ++ + + +L+ +M + + P VV LI+ K + E+
Sbjct: 292 LEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEV 351
Query: 472 VERLFTRLVKAG--ITFNTKTYTTLIS---IHGRTRKRHKAYCRFGEMIQSCLCPDEVSY 526
E++ + G I ++ + TLI GR ++ + R ++ + C+ P+ V+Y
Sbjct: 352 FEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRM-KLEERCV-PNAVTY 409
Query: 527 TALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 586
LI +C ++ A + M PN+ T ++ G C+ +++A F +M++
Sbjct: 410 NCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEK 469
Query: 587 KGIFPDVVTYTVLI 600
+G+ +VVTY LI
Sbjct: 470 EGVKGNVVTYMTLI 483
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/519 (24%), Positives = 221/519 (42%), Gaps = 15/519 (2%)
Query: 108 ALLR-DIVGYCKCDDSFEQFS-TLLDLPHH-SVLVFNVLIKVFASNSMLEHAHQVFVSAK 164
+LLR D + + F FS + L H S L+ +VL+ + M+ A +F + +
Sbjct: 80 SLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYLLLSVLLN---ESKMISEAADLFFALR 136
Query: 165 NVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCG----DIR 220
N G+ S LL L ++E+ P+ Y + D+
Sbjct: 137 NEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVG 196
Query: 221 LAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVI 280
E+ ++ P+V Y I GLC+ ++ A +L ++ + + +N +I
Sbjct: 197 KGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLI 256
Query: 281 HGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIK 340
G+C+ G ++ +V E MK+ P + ++N LL K G V
Sbjct: 257 DGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFV 316
Query: 341 PSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFRE 400
P ++ L + + + +L VY + + + ++ N C+ +L C+EG+ +
Sbjct: 317 PDAFTFSILF----DGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEK 372
Query: 401 ALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 460
A +L +G+ N+ YN +I C++ A + M K+ + P + Y+ LI
Sbjct: 373 AEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIR 432
Query: 461 GFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLC 520
F E E E+ ++ G++ + +TY LI +GR + K + EM +
Sbjct: 433 RFC-ELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM 491
Query: 521 PDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQL 580
P+ VSY LI C ++ A + ++M G P + Y LIDG C I+ A +
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRF 551
Query: 581 FDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
EM +KGI ++VTY LI G++ E L E+
Sbjct: 552 SKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEI 590
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 191/424 (45%), Gaps = 9/424 (2%)
Query: 205 PNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 260
P++ Y +++ C R+ A ++ ++ P+++TY T I G C+ G + + K+
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271
Query: 261 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 320
++ + FN ++ G + G V +A VL+EMK PD +++++L + +
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331
Query: 321 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 380
+K + YT ILL N L + +K+ E+ + + P
Sbjct: 332 NEKAEAALGVYETAVDSGVK--MNAYTCSILL--NALCKEGKIEKAEEILGREMAKGLVP 387
Query: 381 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
N +I N ++ +CR+G A +E +QG+ + +YN +I C+ + A + +
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447
Query: 441 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGR 500
+M + V P V Y+ LI G+ + + F+ + + G N +Y TLI+ +
Sbjct: 448 NKMKLKGVSPSVETYNILIGGYGR-KYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK 506
Query: 501 TRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYT 560
K +A +M + P Y LI C+ ++ A +EM + G NL T
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 566
Query: 561 YTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
Y LIDG + A L E+ RKG+ PDV TY LI+ Y G + L+ EMK
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626
Query: 621 ANCI 624
+ I
Sbjct: 627 RSGI 630
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 120/494 (24%), Positives = 212/494 (42%), Gaps = 21/494 (4%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
F++L ++SN E A V+ +A + G++++ +C+ LL L
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377
Query: 196 XXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
M G +PN Y M+ GD+ A + + + G P + Y IR CE
Sbjct: 378 GREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCEL 437
Query: 252 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 311
G ++ A K V K+ K + +N +I G+ ++ ++ ++L+EM+ + T P+V SY
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY 497
Query: 312 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYN 371
L+N CK + + P + Y LI C +K K + + S E
Sbjct: 498 GTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKE--- 554
Query: 372 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 431
ML+ I N + N ++ G+ EA LL + +G+ + ++YN +I
Sbjct: 555 -MLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAG 613
Query: 432 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
+ + L M + + P + Y LIS KE E+ ERLF + + + Y
Sbjct: 614 NVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKE--GIELTERLFGEM---SLKPDLLVY 668
Query: 492 TTLI---SIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQE 548
++ ++HG KA+ +MI+ + D+ +Y +LI + ++ +L E
Sbjct: 669 NGVLHCYAVHGDM---EKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDE 725
Query: 549 MSRIGCLPNLYTYTCLIDGFCKI-DYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 607
M+ P TY ++ G C++ DY+ A + EM+ KG DV L++ +
Sbjct: 726 MNAREMEPEADTYNIIVKGHCEVKDYMS-AYVWYREMQEKGFLLDVCIGNELVSGLKEEW 784
Query: 608 RIGEKNKLFGEMKA 621
R E + EM
Sbjct: 785 RSKEAEIVISEMNG 798
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 138/525 (26%), Positives = 219/525 (41%), Gaps = 56/525 (10%)
Query: 113 IVGYCK---CDDSFEQFSTLLD---LPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNV 166
I G CK +D+ + F +L LP S++ +N LI + E + +V K
Sbjct: 221 IDGLCKGKRMNDAEQLFDEMLARRLLP--SLITYNTLIDGYCKAGNPEKSFKVRERMKAD 278
Query: 167 GLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCGDIRLAAEIL 226
+E + + N LLK L + + G +P+ T++I+ AE
Sbjct: 279 HIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAA 338
Query: 227 GKIYR----SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHG 282
+Y SG T + LC+ G ++ A +++ + K N +N +I G
Sbjct: 339 LGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDG 398
Query: 283 FCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPS 342
+C++G + A +E M+ PD +YN L+ FC+ G++
Sbjct: 399 YCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKE------------ 446
Query: 343 IVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREAL 402
VN K KLKG S+E YN ++ + R+ +F +
Sbjct: 447 -VN--------KMKLKG---VSPSVETYNILIGG---------------YGRKYEFDKCF 479
Query: 403 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 462
+L++ + G N SY +I+ +CK S A + M R V P V Y+ LI G
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539
Query: 463 AKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPD 522
+ E R ++K GI N TY TLI T K +A E+ + L PD
Sbjct: 540 CS-KGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Query: 523 EVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 582
+Y +LI+ + + AL++EM R G P L TY LI C + I+L +LF
Sbjct: 599 VFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFG 657
Query: 583 EMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
EM K PD++ Y ++ Y HG + + L +M I LD
Sbjct: 658 EMSLK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLD 699
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 145/345 (42%), Gaps = 43/345 (12%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
+ I + V + LE+ MK R +P V+ YN+L++ CK
Sbjct: 182 YGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCK--------------- 226
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
G+++ D ++++ ML + P+ I N ++ +C+
Sbjct: 227 -----------------------GKRMNDAE-QLFDEMLARRLLPSLITYNTLIDGYCKA 262
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
G ++ + E I + ++N ++ + K + A ++ M +P +
Sbjct: 263 GNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTF 322
Query: 456 STLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMI 515
S L G++ + E ++ V +G+ N T + L++ + K KA G +
Sbjct: 323 SILFDGYSSNEKA-EAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREM 381
Query: 516 QSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 575
L P+EV Y +I +C ++ A + M + G P+ Y CLI FC++ ++
Sbjct: 382 AKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEME 441
Query: 576 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
A + ++MK KG+ P V TY +LI Y GR E +K F +K
Sbjct: 442 NAEKEVNKMKLKGVSPSVETYNILIGGY---GRKYEFDKCFDILK 483
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 124/278 (44%), Gaps = 9/278 (3%)
Query: 357 LKGQQLYDKSLEVYNSMLQNAIRPN----TIICNHILRVHCREGQFREALTLLEDFHEQG 412
L ++ ++ +++ ++ I P+ T++ +H+++ QFR + + + E
Sbjct: 119 LNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTK----QFRVTINVFLNILESD 174
Query: 413 INLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV 472
+++ Y + I K S LEL RM + P V Y+ LI G K +
Sbjct: 175 FRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGK-RMNDA 233
Query: 473 ERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAV 532
E+LF ++ + + TY TLI + + K++ M + P +++ L+
Sbjct: 234 EQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKG 293
Query: 533 FCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPD 592
+ A + +EM +G +P+ +T++ L DG+ + + A +++ G+ +
Sbjct: 294 LFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMN 353
Query: 593 VVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 630
T ++L+ K G+I + ++ G A ++ ++ I
Sbjct: 354 AYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVI 391
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 80/187 (42%), Gaps = 10/187 (5%)
Query: 458 LISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQS 517
L+S E LF L GI ++ + T L+ +T++ F +++S
Sbjct: 114 LLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILES 173
Query: 518 CLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLA 577
P + Y I + ++ LF M P+++ Y LIDG CK ++ A
Sbjct: 174 DFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDA 233
Query: 578 TQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKLQDPK 637
QLFDEM + + P ++TY LI Y K G + K+ MKA+ I +P
Sbjct: 234 EQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHI----------EPS 283
Query: 638 LVQFKNV 644
L+ F +
Sbjct: 284 LITFNTL 290
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/499 (22%), Positives = 201/499 (40%), Gaps = 57/499 (11%)
Query: 109 LLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGL 168
+LR +VG D D+ H VF+ L+ +A M+ + VF ++ GL
Sbjct: 117 VLRSLVGGVSEDPE--------DVSH----VFSWLMIYYAKAGMINDSIVVFEQIRSCGL 164
Query: 169 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLAAE 224
+ H+++C LL L +++ G + NIH Y +++ GD A +
Sbjct: 165 KPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEK 224
Query: 225 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 284
+L ++ G P + TY T I C+ A + ++ N +N+ IHGF
Sbjct: 225 LLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFS 284
Query: 285 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 344
+ G + EA + E+K T V +Y L++ +C+ D+ P +V
Sbjct: 285 REGRMREATRLFREIKDDVTANHV-TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVV 343
Query: 345 NYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 404
Y S++ KL ++ + M I P+ I CN ++ +C+ A+ +
Sbjct: 344 TYNSIL----RKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKV 399
Query: 405 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 464
+ E G+ L+ YSY +IH CK + A E + M+++ PG YS L+ GF
Sbjct: 400 KKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYN 459
Query: 465 EQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEV 524
+ E + +L K G LC D
Sbjct: 460 QNKQDE-ITKLLEEFEKRG-----------------------------------LCADVA 483
Query: 525 SYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM 584
Y LI C + +++ A LF+ M + G + + +T + + + + A+ LFD M
Sbjct: 484 LYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVM 543
Query: 585 KRKGIFPDVVTYTVLIAWY 603
+ + ++ Y + A Y
Sbjct: 544 YNRRLMVNLKLYKSISASY 562
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 188/417 (45%), Gaps = 12/417 (2%)
Query: 208 HTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRK 263
H ++ +M G I + + +I G P + + L + D K+ +K
Sbjct: 134 HVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKK 193
Query: 264 LHCKLHPL-NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKG 322
+ KL + N H +N ++H + G +A ++L EM+ FPD+++YN L++ +CKK
Sbjct: 194 M-VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKS 252
Query: 323 DVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNT 382
+ P+IV Y S I + + ++ E+ + + N + T
Sbjct: 253 MHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTT 312
Query: 383 IICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPR 442
+I + CR EAL L E +G + +YN I+ +C++ + A L+
Sbjct: 313 LIDGY-----CRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTE 367
Query: 443 MLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTR 502
M + + P + +TLI+ + K + V ++ +++++G+ + +Y LI +
Sbjct: 368 MSGKKIEPDNITCNTLINAYCKIEDMVSAV-KVKKKMIESGLKLDMYSYKALIHGFCKVL 426
Query: 503 KRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYT 562
+ A MI+ P +Y+ L+ F N + + L +E + G ++ Y
Sbjct: 427 ELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYR 486
Query: 563 CLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
LI CK++ +D A LF+ M++KG+ D V +T + Y + G++ E + LF M
Sbjct: 487 GLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVM 543
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 156/353 (44%), Gaps = 43/353 (12%)
Query: 311 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVY 370
++ L+ + K G + C +KP + T L+ N L Q+L D +++
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLL----NSLVKQRLTDTVWKIF 191
Query: 371 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 430
M++ + N + N ++ + G +A LL + E+G+ + ++YN +I + CK+
Sbjct: 192 KKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKK 251
Query: 431 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKT 490
S AL + RM + V P +V Y++ I GF++E E RLF R +K +T N T
Sbjct: 252 SMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREAT-RLF-REIKDDVTANHVT 309
Query: 491 YTTLISIHGRTRKRHKAYCRFGEMIQS---------------CLC--------------- 520
YTTLI + R +A R E+++S LC
Sbjct: 310 YTTLIDGYCRMNDIDEA-LRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEM 368
Query: 521 ------PDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 574
PD ++ LI +C I +M A + ++M G ++Y+Y LI GFCK+ +
Sbjct: 369 SGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLEL 428
Query: 575 DLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
+ A + M KG P TY+ L+ ++ + E KL E + + D
Sbjct: 429 ENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCAD 481
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 118/237 (49%), Gaps = 2/237 (0%)
Query: 392 HCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPG 451
+ + G +++ + E G+ + + +++ + K+ ++ +M+K V+
Sbjct: 143 YAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVAN 202
Query: 452 VVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRF 511
+ Y+ L+ +K + E E+L + + + G+ + TY TLIS++ + +A
Sbjct: 203 IHVYNVLVHACSK-SGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQ 261
Query: 512 GEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKI 571
M +S + P+ V+Y + I F M A LF+E+ + N TYT LIDG+C++
Sbjct: 262 DRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREI-KDDVTANHVTYTTLIDGYCRM 320
Query: 572 DYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 628
+ ID A +L + M+ +G P VVTY ++ + GRI E N+L EM I D+
Sbjct: 321 NDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDN 377
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 102/221 (46%), Gaps = 23/221 (10%)
Query: 422 EIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLV- 480
++I ++ K + K A +L+ ++ +R +L + +L+ G +++ E V +F+ L+
Sbjct: 85 KMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDP---EDVSHVFSWLMI 141
Query: 481 ---KAGITFNT----------------KTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCP 521
KAG+ ++ + T L++ + R + F +M++ +
Sbjct: 142 YYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVA 201
Query: 522 DEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLF 581
+ Y L+ + A L EM G P+++TY LI +CK A +
Sbjct: 202 NIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQ 261
Query: 582 DEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
D M+R G+ P++VTY I + + GR+ E +LF E+K +
Sbjct: 262 DRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDD 302
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 120/532 (22%), Positives = 236/532 (44%), Gaps = 52/532 (9%)
Query: 139 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 198
V NVL + SN +++ A +++ +G+ + L++ +
Sbjct: 207 VNNVLSSLVRSN-LIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRV 265
Query: 199 METGPLPN--IHTYTIMMSCG--DIRLAAEILGKIYRSGGNP-TVVTYGTYIRGLCECGY 253
M G P+ + + + +C D+ +A ++L ++ G P + TY + I + G
Sbjct: 266 MSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGN 325
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
++ A +++ ++ P++ ++++G+C+ + +AL++ M+ PD +++
Sbjct: 326 MEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSV 385
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
++ FCK ++ +I PS V ++I C LK + + +LE++N
Sbjct: 386 MVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGC---LKAES-PEAALEIFNDS 441
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
++ I + +CN I + C++G+ A + L+ ++GI N YN ++ C+
Sbjct: 442 FESWI-AHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNM 500
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ--------------SNFEMVERLFTRL 479
+A + ML++ + P YS LI GF K + SNFE E ++ +
Sbjct: 501 DLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTI 560
Query: 480 V----KAGITFNTK-----------------TYTTLISIHGRTRKRHKAYCRFGEMIQSC 518
+ K G T K +Y ++I + A + EM ++
Sbjct: 561 INGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENG 620
Query: 519 LCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLAT 578
P+ V++T+LI FC M++A + EM + +L Y LIDGFCK + + A
Sbjct: 621 KSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAY 680
Query: 579 QLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 630
LF E+ G+ P+V Y LI+ + G++ L+ +M ++DGI
Sbjct: 681 TLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKM------VNDGI 726
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 124/535 (23%), Positives = 223/535 (41%), Gaps = 52/535 (9%)
Query: 139 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 198
+ +I F +E A +V G+ + + + L+ +
Sbjct: 312 TYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRM 371
Query: 199 METGPLPNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 254
E G P+ +++M+ C ++ + A E ++ P+ V T I+G C
Sbjct: 372 EEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQG---CLKA 428
Query: 255 DVAHKLVRKLHCKLHPLNSHCF--NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 312
+ + + +H F N + FC++G V+ A L+ M+ P+V YN
Sbjct: 429 ESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYN 488
Query: 313 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYN 371
++ A C+ ++ ++P+ Y+ LI KNK Q +D V N
Sbjct: 489 NMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNK-DEQNAWD----VIN 543
Query: 372 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF-HEQGINLNQYSYNEIIHMICKE 430
M + N +I N I+ C+ GQ +A +L++ E+ +++ SYN II K
Sbjct: 544 QMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKV 603
Query: 431 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKT 490
A+E M + P VV +++LI+GF K + ++ + + + +
Sbjct: 604 GDTDSAVETYREMSENGKSPNVVTFTSLINGFCK-SNRMDLALEMTHEMKSMELKLDLPA 662
Query: 491 YTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMS 550
Y LI + AY F E+ + L P+ Y +LI+ F N+ +M+ A L+++M
Sbjct: 663 YGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMV 722
Query: 551 RIGCLPNLYTYTCLIDGFCKIDYIDLATQLF----------------------------- 581
G +L+TYT +IDG K I+LA+ L+
Sbjct: 723 NDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFL 782
Query: 582 ------DEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 630
+EMK+K + P+V+ Y+ +IA +H+ G + E +L EM I+ DD +
Sbjct: 783 KASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTV 837
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/513 (21%), Positives = 216/513 (42%), Gaps = 21/513 (4%)
Query: 101 GMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSV----LVFNVLIKVFASNSMLEHA 156
G+ + V A + GYCK ++ + + + ++F+V+++ F N +E A
Sbjct: 340 GIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKA 399
Query: 157 HQVFVSAKNVGLE-----LH--IRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHT 209
+ ++ K+V + +H I+ C LK + G + N
Sbjct: 400 IEFYMRMKSVRIAPSSVLVHTMIQGC---LKAESPEAALEIFNDSFESWIAHGFMCN-KI 455
Query: 210 YTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLH 269
+ + G + A L + + G P VV Y + C +D+A + ++ K
Sbjct: 456 FLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGL 515
Query: 270 PLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXX 329
N+ ++ +I GF + A +V+ +M +S + YN ++N CK G
Sbjct: 516 EPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKE 575
Query: 330 XXXXX-XXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHI 388
+ S +Y S+I + D ++E Y M +N PN + +
Sbjct: 576 MLQNLIKEKRYSMSCTSYNSII----DGFVKVGDTDSAVETYREMSENGKSPNVVTFTSL 631
Query: 389 LRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV 448
+ C+ + AL + + + L+ +Y +I CK++ K A L + + +
Sbjct: 632 INGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGL 691
Query: 449 LPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAY 508
+P V Y++LISGF + + L+ ++V GI+ + TYTT+I + + A
Sbjct: 692 MPNVSVYNSLISGF-RNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLAS 750
Query: 509 CRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGF 568
+ E++ + PDE+ + L+ + A + +EM + PN+ Y+ +I G
Sbjct: 751 DLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGH 810
Query: 569 CKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 601
+ ++ A +L DEM KGI D + +L++
Sbjct: 811 HREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS 843
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 123/291 (42%), Gaps = 42/291 (14%)
Query: 217 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 276
GD A E ++ +G +P VVT+ + I G C+ +D+A ++ ++ L+ +
Sbjct: 604 GDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAY 663
Query: 277 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 336
A+I GFC++ + A + E+ P+V YN L++ F G +
Sbjct: 664 GALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVN 723
Query: 337 CQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREG 396
I + YT++I LK + S ++Y+ +L I P+ I+ ++ ++G
Sbjct: 724 DGISCDLFTYTTMI---DGLLKDGNINLAS-DLYSELLDLGIVPDEILHMVLVNGLSKKG 779
Query: 397 QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYS 456
QF +A +LE+ M K++V P V+ YS
Sbjct: 780 QFLKASKMLEE-----------------------------------MKKKDVTPNVLLYS 804
Query: 457 TLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKA 507
T+I+G +E N RL +++ GI + + L+S GR K A
Sbjct: 805 TVIAGHHRE-GNLNEAFRLHDEMLEKGIVHDDTVFNLLVS--GRVEKPPAA 852
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 115/292 (39%), Gaps = 41/292 (14%)
Query: 310 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEV 369
++N LLNA+ + + ++ P V Y + +L + L L D++ E+
Sbjct: 171 AFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVP-FVPYVNNVL---SSLVRSNLIDEAKEI 226
Query: 370 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 429
YN M+ + + + ++R RE + EA+ + +G + ++ + CK
Sbjct: 227 YNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACK 286
Query: 430 ESYPKMALELMPRMLKRNVLPGVV-NYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNT 488
MAL+L+ M + +P Y+++I F KE N E R+ +V GI +
Sbjct: 287 TPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKE-GNMEEAVRVMDEMVGFGIPMSV 345
Query: 489 KTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQE 548
++ T+L+ +C E+ A LF
Sbjct: 346 -----------------------------------IAATSLVNGYCKGNELGKALDLFNR 370
Query: 549 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
M G P+ ++ +++ FCK ++ A + + MK I P V +I
Sbjct: 371 MEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMI 422
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 84/196 (42%), Gaps = 9/196 (4%)
Query: 130 LDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXX 189
LDLP + LI F + ++ A+ +F +GL ++ N L+
Sbjct: 658 LDLP-----AYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMD 712
Query: 190 XXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYI 245
++ G ++ TYT M+ G+I LA+++ ++ G P + + +
Sbjct: 713 AAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLV 772
Query: 246 RGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF 305
GL + G A K++ ++ K N ++ VI G + G +NEA + +EM
Sbjct: 773 NGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIV 832
Query: 306 PDVYSYNMLLNAFCKK 321
D +N+L++ +K
Sbjct: 833 HDDTVFNLLVSGRVEK 848
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 190/412 (46%), Gaps = 15/412 (3%)
Query: 222 AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHC-KLHPLNSHCFNAVI 280
A ++ ++ S P+++ + + + + DV L ++ + PL C N V+
Sbjct: 67 ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTC-NIVM 125
Query: 281 HGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIK 340
H C A L +M PD+ ++ LLN +C + K
Sbjct: 126 HCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFK 185
Query: 341 PSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFR 399
P++V YT+LI LCKN+ + ++E++N M N RPN + N ++ C G++
Sbjct: 186 PNVVTYTTLIRCLCKNRH-----LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 400 EALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLI 459
+A LL D ++ I N ++ +I K A EL M++ +V P V Y +LI
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 460 SGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCL 519
+G + ++F + + G N YTTLI ++++ F EM Q +
Sbjct: 301 NGLCM-YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Query: 520 CPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 579
+ ++YT LI +C + +VA +F +MS P++ TY L+DG C ++ A
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALM 419
Query: 580 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIK 631
+F+ M+++ + ++VTYT++I K G++ + LF C L G+K
Sbjct: 420 IFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLF------CSLFSKGMK 465
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 155/368 (42%), Gaps = 44/368 (11%)
Query: 198 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++ G PN+ TYT ++ C + A E+ ++ +G P VVTY + GLCE G
Sbjct: 179 ILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGR 238
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
A L+R + + N F A+I F + G + EA E+ M +PDV++Y
Sbjct: 239 WGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGS 298
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
L+N C G L D++ +++ M
Sbjct: 299 LINGLCMYG---------------------------------------LLDEARQMFYLM 319
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
+N PN +I ++ C+ + + + + + ++G+ N +Y +I C P
Sbjct: 320 ERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRP 379
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTT 493
+A E+ +M R P + Y+ L+ G E +F + K + N TYT
Sbjct: 380 DVAQEVFNQMSSRRAPPDIRTYNVLLDGLCC-NGKVEKALMIFEYMRKREMDINIVTYTI 438
Query: 494 LISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIG 553
+I + K A+ F + + P+ ++YT +I+ FC ++ A +LF++M G
Sbjct: 439 IIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDG 498
Query: 554 CLPNLYTY 561
LPN Y
Sbjct: 499 FLPNESVY 506
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 146/332 (43%), Gaps = 5/332 (1%)
Query: 290 NEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSL 349
N+AL++ M SR P + + LL+ K I P + ++
Sbjct: 65 NDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCT-CNI 123
Query: 350 ILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFH 409
++ C L Q ++ M++ P+ + +L +C + +A+ L +
Sbjct: 124 VMHCVC-LSSQPC--RASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL 180
Query: 410 EQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNF 469
G N +Y +I +CK + A+EL +M P VV Y+ L++G E +
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLC-EIGRW 239
Query: 470 EMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTAL 529
L ++K I N T+T LI + K +A + MIQ + PD +Y +L
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299
Query: 530 IAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 589
I C ++ A +F M R GC PN YT LI GFCK ++ ++F EM +KG+
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359
Query: 590 FPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 621
+ +TYTVLI Y GR ++F +M +
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVAQEVFNQMSS 391
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 137/280 (48%), Gaps = 2/280 (0%)
Query: 343 IVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREAL 402
I ++S + +N L Q D +L+++ M+ + P+ I +L V + ++ +
Sbjct: 45 IRAFSSYRKILRNGLHNLQFND-ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVI 103
Query: 403 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 462
+L E GI + N ++H +C S P A + +M+K P +V +++L++G+
Sbjct: 104 SLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGY 163
Query: 463 AKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPD 522
+ E LF +++ G N TYTTLI + R + A F +M + P+
Sbjct: 164 C-HWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPN 222
Query: 523 EVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 582
V+Y AL+ C I A L ++M + PN+ T+T LID F K+ + A +L++
Sbjct: 223 VVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYN 282
Query: 583 EMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
M + ++PDV TY LI +G + E ++F M+ N
Sbjct: 283 VMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERN 322
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 4/178 (2%)
Query: 138 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 197
+++ LI F + +E ++F G+ + + L++
Sbjct: 329 VIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQ 388
Query: 198 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
+ P+I TY +++ G + A I + + + +VTY I+G+C+ G
Sbjct: 389 MSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGK 448
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 311
V+ A L L K N + +I GFC+RG ++EA + ++MK P+ Y
Sbjct: 449 VEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 114/485 (23%), Positives = 222/485 (45%), Gaps = 25/485 (5%)
Query: 172 IRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCGDIRLA----AEILG 227
+RS L+ L L ETG P++ +YT +++ ++ + I+
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 228 KIYRSGGNPTVVTYGTYIRGLCECGYV-DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQR 286
++ +SG + + I E G + D L++ L+P S +N +I G+
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTS-TYNTLIKGYGIA 163
Query: 287 GAVNEALEVLE---EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 343
G + E+L+ E + P++ ++N+L+ A+CKK V C ++P
Sbjct: 164 GKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDT 223
Query: 344 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 403
V Y + I C + KG+ + +S V +++ +PN C ++ +CREG+ R+ L
Sbjct: 224 VTYNT-IATCYVQ-KGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLR 281
Query: 404 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 463
+ E + N +N +I+ + E++ M + NV V+ YST+++ ++
Sbjct: 282 FVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWS 341
Query: 464 KEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLC--- 520
E ++F +VKAG+ + Y+ L + R ++ KA E++++ +
Sbjct: 342 S-AGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAE----ELLETLIVESR 396
Query: 521 PDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQL 580
P+ V +T +I+ +C+ M+ A +F +M + G PN+ T+ L+ G+ ++ A ++
Sbjct: 397 PNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEV 456
Query: 581 FDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKLQDPKLVQ 640
M+ G+ P+ T+ +L + G E NK +K D I KL+ KL Q
Sbjct: 457 LQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCK----DIEIAKLE--KLYQ 510
Query: 641 FKNVG 645
++ G
Sbjct: 511 KQSSG 515
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 100/453 (22%), Positives = 185/453 (40%), Gaps = 69/453 (15%)
Query: 92 IIIHTFAMAGMHLE-VFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASN 150
+I +T +A M ++ + + IV EQ T LD + FN +I F+ +
Sbjct: 80 LISYTTLLAAMTVQKQYGSISSIV------SEVEQSGTKLD-----SIFFNAVINAFSES 128
Query: 151 SMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPL---PNI 207
+E A Q + K +GL + N L+K ++E G + PNI
Sbjct: 129 GNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNI 188
Query: 208 HTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGT----YI-RGLCECGYVDVAH 258
T+ +++ + A E++ K+ G P VTY T Y+ +G +V
Sbjct: 189 RTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVE 248
Query: 259 KLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAF 318
K+V K K N V+ G+C+ G V + L + MK R ++ +N L+N F
Sbjct: 249 KMVMKEKAK---PNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGF 305
Query: 319 CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAI 378
+ D C +K ++ Y++++ N +K+ +V+ M++ +
Sbjct: 306 VEVMDRDGIDEVLTLMKECNVKADVITYSTVM----NAWSSAGYMEKAAQVFKEMVKAGV 361
Query: 379 RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 438
+P+ ++Y+ + + PK A E
Sbjct: 362 KPDA-----------------------------------HAYSILAKGYVRAKEPKKAEE 386
Query: 439 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIH 498
L+ ++ + P VV ++T+ISG+ S + R+F ++ K G++ N KT+ TL+ +
Sbjct: 387 LLETLIVES-RPNVVIFTTVISGWCSNGS-MDDAMRVFNKMCKFGVSPNIKTFETLMWGY 444
Query: 499 GRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIA 531
++ KA +M++ C E S L+A
Sbjct: 445 LEVKQPWKAE-EVLQMMRGCGVKPENSTFLLLA 476
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 178/404 (44%), Gaps = 48/404 (11%)
Query: 205 PNIHTYTIMMSCGDIRLAAEILGKIYRS----GGNPTVVTYGTYIRGLCECGYVDVAHKL 260
P+++ Y +++ E + +Y+ G P T+ IR LC+ VD A +L
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 261 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 320
++ K N F ++ G+C+ G ++ LE+L M+S P+ YN ++++FC+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 321 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNK--LKGQQLY-DKSLEVYNSMLQN 376
+G + P IV + S I LCK L +++ D L+ Y +
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGL--- 286
Query: 377 AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMA 436
RPN+I N +L+ C+ G +A TL E E + SYN + + + A
Sbjct: 287 -PRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA 345
Query: 437 LELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLIS 496
++ +M + + P + +Y+ L+ G L K G+ + KT L+
Sbjct: 346 ETVLKQMTDKGIGPSIYSYNILMDG-----------------LCKLGMLSDAKTIVGLMK 388
Query: 497 IHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLP 556
+G +CPD V+Y L+ +C++ +++ A +L QEM R CLP
Sbjct: 389 RNG-------------------VCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLP 429
Query: 557 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
N YT L+ K+ I A +L +M KG D VT +++
Sbjct: 430 NAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIV 473
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 184/430 (42%), Gaps = 25/430 (5%)
Query: 198 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKI----YRSGGNPTVVTYGTYIRGLC 249
+ E G +P+I T+ +S G + A+ I + Y P +TY ++G C
Sbjct: 243 MREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFC 302
Query: 250 ECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 309
+ G ++ A L + + +N + G + G EA VL++M P +Y
Sbjct: 303 KVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIY 362
Query: 310 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEV 369
SYN+L++ CK G + + P V Y L+ + D + +
Sbjct: 363 SYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL----HGYCSVGKVDAAKSL 418
Query: 370 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 429
M++N PN CN +L + G+ EA LL +E+G L+ + N I+ +C
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 430 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTK 489
A+E++ M V+ S + S +V+ L++ +
Sbjct: 479 SGELDKAIEIVKGMR--------VHGSAALGNLG--NSYIGLVD---DSLIENNCLPDLI 525
Query: 490 TYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM 549
TY+TL++ + + +A F EM+ L PD V+Y I FC +++ A + ++M
Sbjct: 526 TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM 585
Query: 550 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
+ GC +L TY LI G + I L DEMK KGI P++ TY I + + ++
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKV 645
Query: 610 GEKNKLFGEM 619
+ L EM
Sbjct: 646 EDATNLLDEM 655
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 150/366 (40%), Gaps = 45/366 (12%)
Query: 266 CKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVX 325
C + P ++ FN +I C V+ A E+ +EM P+ +++ +L+ +CK G
Sbjct: 141 CGIAP-QTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAG--- 196
Query: 326 XXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIIC 385
L DK LE+ N+M + PN +I
Sbjct: 197 ------------------------------------LTDKGLELLNAMESFGVLPNKVIY 220
Query: 386 NHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLK 445
N I+ CREG+ ++ ++E E+G+ + ++N I +CKE A + M
Sbjct: 221 NTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMEL 280
Query: 446 RNVL----PGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRT 501
L P + Y+ ++ GF K E + LF + + + ++Y + R
Sbjct: 281 DEYLGLPRPNSITYNLMLKGFCK-VGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRH 339
Query: 502 RKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTY 561
K +A +M + P SY L+ C + ++ A + M R G P+ TY
Sbjct: 340 GKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTY 399
Query: 562 TCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 621
CL+ G+C + +D A L EM R P+ T +L+ K GRI E +L +M
Sbjct: 400 GCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE 459
Query: 622 NCILLD 627
LD
Sbjct: 460 KGYGLD 465
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 121/286 (42%), Gaps = 16/286 (5%)
Query: 236 PTVVTYGTYIRGLCECG-YVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE 294
P ++TY T + GLC+ G + + + + KL P +S +N IH FC++G ++ A
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP-DSVAYNIFIHHFCKQGKISSAFR 580
Query: 295 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNY-TSLILLC 353
VL++M+ + +YN L+ K + I P+I Y T++ LC
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640
Query: 354 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLE---DFHE 410
+G+++ D + + + M+Q I PN +++ C+ F A + E
Sbjct: 641 ----EGEKVEDAT-NLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICG 695
Query: 411 QGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFE 470
Q L +NE++ A EL+ +L R G Y L+ K + E
Sbjct: 696 QKEGLYSLMFNELL----AAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCK-KDELE 750
Query: 471 MVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQ 516
+ + +++ G F+ +I G+ + +A +M++
Sbjct: 751 VASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 60/117 (51%)
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
+ +M+ + P ++ LI C+ ++ A LF EM GC PN +T+ L+ G+CK
Sbjct: 135 YKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCK 194
Query: 571 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
D +L + M+ G+ P+ V Y +++ + + GR + K+ +M+ ++ D
Sbjct: 195 AGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPD 251
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Query: 493 TLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVS---YTALIAVFCNIREMNVACALFQEM 549
+++SI ++ KA+ +F ++++S ++ S Y L+ R + L+++M
Sbjct: 80 SVVSIFAKSNHIDKAFPQF-QLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDM 138
Query: 550 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
G P YT+ LI C +D A +LFDEM KG P+ T+ +L+ Y K G
Sbjct: 139 VLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLT 198
Query: 610 GEKNKLFGEMKANCIL 625
+ +L M++ +L
Sbjct: 199 DKGLELLNAMESFGVL 214
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 191/428 (44%), Gaps = 11/428 (2%)
Query: 206 NIHTYTIMMSC--GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRK 263
+IH+ + C G + A + K+ SG P ++T+ + GLC+ GY++ A LVR+
Sbjct: 122 SIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVRE 181
Query: 264 LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGD 323
+ N +N +I G C V++AL + M P+ + N++++A C+KG
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 324 VXXXXXXXXXXXXCQIKPSIVNYTSLILLC----KNKLKGQQLYDKSLEVYNSMLQNAIR 379
+ + S N I++C + K + ++LEV+ M Q +
Sbjct: 242 IGNNNKKLLEEI---LDSSQANAPLDIVICTILMDSCFKNGNVV-QALEVWKEMSQKNVP 297
Query: 380 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 439
++++ N I+R C G A + D ++G+N + ++YN +I +CKE A +L
Sbjct: 298 ADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDL 357
Query: 440 MPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHG 499
M V P ++Y +I G + ++K+ + + +I +G
Sbjct: 358 HGTMQNGGVAPDQISYKVIIQGLCI-HGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYG 416
Query: 500 RTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLY 559
R A M+ + P+ + ALI + + A + EM P+
Sbjct: 417 RYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTT 476
Query: 560 TYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
TY L+ C + ++ LA QL+DEM R+G PD++TYT L+ GR+ + L +
Sbjct: 477 TYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRI 536
Query: 620 KANCILLD 627
+A I +D
Sbjct: 537 QATGITID 544
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 160/387 (41%), Gaps = 19/387 (4%)
Query: 133 PHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLL-----KCLXXXXX 187
P + + +N LIK S + ++ A +F + G+ + +CN ++ K +
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246
Query: 188 XXXXXXXXXXLMETGPLPNIHTYTIMMSC---GDIRLAAEILGKIYRSGGNPTVVTYGTY 244
PL + +M SC G++ A E+ ++ + V Y
Sbjct: 247 KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVI 306
Query: 245 IRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRT 304
IRGLC G + A+ + + + + +N +I C+ G +EA ++ M++
Sbjct: 307 IRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGV 366
Query: 305 FPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLY- 363
PD SY +++ C GDV + P ++ + +I G Y
Sbjct: 367 APDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVI-------DGYGRYG 419
Query: 364 --DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYN 421
+L V N ML ++PN N ++ + + G+ +A + + I+ + +YN
Sbjct: 420 DTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYN 479
Query: 422 EIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVK 481
++ C + ++A +L ML+R P ++ Y+ L+ G + + E L +R+
Sbjct: 480 LLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLC-WKGRLKKAESLLSRIQA 538
Query: 482 AGITFNTKTYTTLISIHGRTRKRHKAY 508
GIT + + L + R ++ +AY
Sbjct: 539 TGITIDHVPFLILAKKYTRLQRPGEAY 565
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 179/405 (44%), Gaps = 19/405 (4%)
Query: 225 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 284
I K+ G +P V I C+ G + A L+R ++ +++ +N VI G C
Sbjct: 116 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLC 172
Query: 285 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 344
+ G +EA + L EM PD SYN L++ FCK G+ ++V
Sbjct: 173 EHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRA-------------KALV 219
Query: 345 NYTSLILLCKNKLKGQQLYDKSL--EVYNSMLQNAIRPNTIICNHILRVHCREGQFREAL 402
+ S + L + + Y+ E Y M+ + P+ + + I+ C+ G+ E
Sbjct: 220 DEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGG 279
Query: 403 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 462
LL + E + N +Y ++ + K + + AL L +M+ R + +V Y+ L+ G
Sbjct: 280 LLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGL 339
Query: 463 AKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPD 522
K + E+ F L++ N TYT L+ + A +M++ + P+
Sbjct: 340 FK-AGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPN 398
Query: 523 EVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 582
V+Y+++I + + A +L ++M +PN +TY +IDG K ++A +L
Sbjct: 399 VVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSK 458
Query: 583 EMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
EM+ G+ + L+ + GRI E L +M + + LD
Sbjct: 459 EMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLD 503
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 134/604 (22%), Positives = 235/604 (38%), Gaps = 65/604 (10%)
Query: 82 GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFN 141
GF V F II+ G LE LLR++ E+ S P+H + +
Sbjct: 254 GFDPDVVTFSSIINRLCKGGKVLEGGLLLREM----------EEMSVY---PNH--VTYT 298
Query: 142 VLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMET 201
L+ ++ HA ++ G+ + + L+ L L+E
Sbjct: 299 TLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLED 358
Query: 202 GPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 257
+PN+ TYT ++ GD+ A I+ ++ P VVTY + I G + G ++ A
Sbjct: 359 NQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEA 418
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
L+RK+ + N + VI G + G A+E+ +EM+ + Y + L+N
Sbjct: 419 VSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNH 478
Query: 318 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--------------------------- 350
+ G + + +NYTSLI
Sbjct: 479 LKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWD 538
Query: 351 -----LLCKNKLK-GQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 404
+L LK G+ D + Y M + I P+ N ++ ++G L L
Sbjct: 539 VVSYNVLISGMLKFGKVGADWA---YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKL 595
Query: 405 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 464
+ GI + S N ++ M+C+ + A+ ++ +M+ + P + Y + +K
Sbjct: 596 WDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSK 655
Query: 465 EQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEV 524
+ + + + L+ GI + + Y TLI+ + KA G+M PD V
Sbjct: 656 HK-RADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTV 714
Query: 525 SYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM 584
++ +L+ + + A + + M G PN+ TY +I G I + EM
Sbjct: 715 TFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEM 774
Query: 585 KRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI---KKLQDPKLVQF 641
K +G+ PD TY LI+ K G + G M C ++ DG+ + + +F
Sbjct: 775 KSRGMRPDDFTYNALISGQAKIGNMK------GSMTIYCEMIADGLVPKTSTYNVLISEF 828
Query: 642 KNVG 645
NVG
Sbjct: 829 ANVG 832
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 94/385 (24%), Positives = 173/385 (44%), Gaps = 23/385 (5%)
Query: 238 VVTYGTYIRGLCECGYV--DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 295
VV+Y I G+ + G V D A+K +R+ + P + FN +++ ++G L++
Sbjct: 539 VVSYNVLISGMLKFGKVGADWAYKGMRE--KGIEP-DIATFNIMMNSQRKQGDSEGILKL 595
Query: 296 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 355
++MKS P + S N+++ C+ G + +I P++ Y + L +
Sbjct: 596 WDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTY-RIFLDTSS 654
Query: 356 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 415
K K D + + ++L I+ + + N ++ C+ G ++A ++ D +G
Sbjct: 655 KHKRA---DAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIP 711
Query: 416 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 475
+ ++N ++H S+ + AL M++ + P V Y+T+I G + + + V++
Sbjct: 712 DTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLS-DAGLIKEVDKW 770
Query: 476 FTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCN 535
+ + G+ + TY LIS + + + EMI L P +Y LI+ F N
Sbjct: 771 LSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFAN 830
Query: 536 IREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKI------------DYIDLATQLFDE 583
+ +M A L +EM + G PN TY +I G CK+ Y+ A L E
Sbjct: 831 VGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKE 890
Query: 584 M-KRKGIFPDVVTYTVLIAWYHKHG 607
M + KG P T + A + K G
Sbjct: 891 MVEEKGYIPCNQTIYWISAAFSKPG 915
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 164/353 (46%), Gaps = 22/353 (6%)
Query: 272 NSHCFNAVIHGFCQRGAVNEALEVL-EEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 330
+S +N++IH F G V++ + ++ +M + PDV++ N+L+++FCK G +
Sbjct: 92 DSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL 151
Query: 331 XXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHIL 389
I V Y ++I LC++ L D++ + + M++ I P+T+ N ++
Sbjct: 152 LRNRV---ISIDTVTYNTVISGLCEHGLA-----DEAYQFLSEMVKMGILPDTVSYNTLI 203
Query: 390 RVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM-ALELMPR-MLKRN 447
C+ G F A L+++ E N I H I SY + A+E R M+
Sbjct: 204 DGFCKVGNFVRAKALVDEISE---------LNLITHTILLSSYYNLHAIEEAYRDMVMSG 254
Query: 448 VLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKA 507
P VV +S++I+ K E L + + + N TYTTL+ + A
Sbjct: 255 FDPDVVTFSSIINRLCKGGKVLEG-GLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHA 313
Query: 508 YCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDG 567
+ +M+ + D V YT L+ ++ A F+ + +PN+ TYT L+DG
Sbjct: 314 LALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDG 373
Query: 568 FCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
CK + A + +M K + P+VVTY+ +I Y K G + E L +M+
Sbjct: 374 LCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKME 426
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/462 (22%), Positives = 194/462 (41%), Gaps = 47/462 (10%)
Query: 198 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++E +PN+ TY+ M++ G + A +L K+ P TYGT I GL + G
Sbjct: 390 MLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGK 449
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
++A +L +++ N++ +A+++ + G + E ++++M S D +Y
Sbjct: 450 EEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTS 509
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLK-GQQLYDKSLEVYNS 372
L++ F K GD + +V+Y LI LK G+ D + Y
Sbjct: 510 LIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLI---SGMLKFGKVGADWA---YKG 563
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
M + I P+ N ++ ++G L L + GI + S N ++ M+C+
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGK 623
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
+ A+ ++ +M+ + P + Y + +K + + + + L+ GI + + Y
Sbjct: 624 MEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHK-RADAIFKTHETLLSYGIKLSRQVYN 682
Query: 493 TLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIA---VFCNIREM---------- 539
TLI+ + KA G+M PD V++ +L+ V ++R+
Sbjct: 683 TLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEA 742
Query: 540 ----NVAC------------------ALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLA 577
NVA EM G P+ +TY LI G KI + +
Sbjct: 743 GISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGS 802
Query: 578 TQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
++ EM G+ P TY VLI+ + G++ + +L EM
Sbjct: 803 MTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEM 844
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 121/548 (22%), Positives = 231/548 (42%), Gaps = 47/548 (8%)
Query: 82 GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFN 141
G S V ++IH+F G +LLR+ V D + +N
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV--ISID----------------TVTYN 165
Query: 142 VLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMET 201
+I + + + A+Q +G+ S N L+ + E
Sbjct: 166 TVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISEL 225
Query: 202 GPLPNIHTYTIMMSC-GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 260
N+ T+TI++S ++ E + SG +P VVT+ + I LC+ G V L
Sbjct: 226 ----NLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLL 281
Query: 261 VRKL-HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 319
+R++ ++P N + ++ + AL + +M D+ Y +L++
Sbjct: 282 LREMEEMSVYP-NHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 320 KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCK-NKLKGQQLYDKSLEVYNSMLQNA 377
K GD+ P++V YT+L+ LCK L + + ML+ +
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEF------IITQMLEKS 394
Query: 378 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 437
+ PN + + ++ + ++G EA++LL +Q + N ++Y +I + K +MA+
Sbjct: 395 VIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAI 454
Query: 438 ELMPRM----LKRN--VLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
EL M ++ N +L +VN+ I G KE V+ L +V G+T + Y
Sbjct: 455 ELSKEMRLIGVEENNYILDALVNHLKRI-GRIKE------VKGLVKDMVSKGVTLDQINY 507
Query: 492 TTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR 551
T+LI + + A EM + + D VSY LI+ ++ A ++ M
Sbjct: 508 TSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWA-YKGMRE 566
Query: 552 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
G P++ T+ +++ K + +L+D+MK GI P +++ +++ ++G++ E
Sbjct: 567 KGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEE 626
Query: 612 KNKLFGEM 619
+ +M
Sbjct: 627 AIHILNQM 634
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 173/385 (44%), Gaps = 5/385 (1%)
Query: 216 CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHC 275
GD A ++LG +G + T + I L + G A L +L +
Sbjct: 282 SGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRA 341
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
+NA++ G+ + G + +A ++ EM+ PD ++Y++L++A+ G
Sbjct: 342 YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEME 401
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
++P+ ++ L+ +++ + Q K+ +V M ++P+ N ++ +
Sbjct: 402 AGDVQPNSFVFSRLLAGFRDRGEWQ----KTFQVLKEMKSIGVKPDRQFYNVVIDTFGKF 457
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
A+T + +GI ++ ++N +I CK +A E+ M +R LP Y
Sbjct: 458 NCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTY 517
Query: 456 STLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMI 515
+ +I+ + +Q ++ ++RL ++ GI N T+TTL+ ++G++ + + A EM
Sbjct: 518 NIMINSYG-DQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMK 576
Query: 516 QSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 575
L P Y ALI + A F+ M+ G P+L LI+ F +
Sbjct: 577 SVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDA 636
Query: 576 LATQLFDEMKRKGIFPDVVTYTVLI 600
A + MK G+ PDVVTYT L+
Sbjct: 637 EAFAVLQYMKENGVKPDVVTYTTLM 661
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 174/387 (44%), Gaps = 7/387 (1%)
Query: 237 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEA--LE 294
T +TY I ++ A L+ K+ + + ++ VI + ++ L
Sbjct: 196 TPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLR 255
Query: 295 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 354
+ +E++ + DV N ++ F K GD + S+I
Sbjct: 256 LYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALA 315
Query: 355 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 414
+ G+ L ++L + + Q+ I+P T N +L+ + + G ++A +++ + ++G++
Sbjct: 316 DS--GRTLEAEAL--FEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVS 371
Query: 415 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVER 474
++++Y+ +I + A ++ M +V P +S L++GF +++ ++ +
Sbjct: 372 PDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGF-RDRGEWQKTFQ 430
Query: 475 LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFC 534
+ + G+ + + Y +I G+ A F M+ + PD V++ LI C
Sbjct: 431 VLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHC 490
Query: 535 NIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 594
VA +F+ M R GCLP TY +I+ + + D +L +MK +GI P+VV
Sbjct: 491 KHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVV 550
Query: 595 TYTVLIAWYHKHGRIGEKNKLFGEMKA 621
T+T L+ Y K GR + + EMK+
Sbjct: 551 THTTLVDVYGKSGRFNDAIECLEEMKS 577
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 100/468 (21%), Positives = 184/468 (39%), Gaps = 44/468 (9%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
V + N +I FA + A Q+ A+ GL + ++ L
Sbjct: 268 DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALF 327
Query: 196 XXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
L ++G P Y ++ G ++ A ++ ++ + G +P TY I
Sbjct: 328 EELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNA 387
Query: 252 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 311
G + A +++++ NS F+ ++ GF RG + +VL+EMKS PD Y
Sbjct: 388 GRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFY 447
Query: 312 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYN 371
N++++ F K C D ++ ++
Sbjct: 448 NVVIDTFGK--------------FNC-------------------------LDHAMTTFD 468
Query: 372 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 431
ML I P+ + N ++ HC+ G+ A + E +G +YN +I+ +
Sbjct: 469 RMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQE 528
Query: 432 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
L+ +M + +LP VV ++TL+ + K + +E L + G+ ++ Y
Sbjct: 529 RWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECL-EEMKSVGLKPSSTMY 587
Query: 492 TTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR 551
LI+ + + +A F M L P ++ +LI F R A A+ Q M
Sbjct: 588 NALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKE 647
Query: 552 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 599
G P++ TYT L+ ++D +++EM G PD ++L
Sbjct: 648 NGVKPDVVTYTTLMKALIRVDKFQKVPVVYEEMIMSGCKPDRKARSML 695
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 116/513 (22%), Positives = 227/513 (44%), Gaps = 56/513 (10%)
Query: 172 IRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCGDIRLA----AEILG 227
+RS L+ L L ETG P++ +YT +++ ++ + I+
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 228 KIYRSGGNPTVVTYGTYIRGLCECGYV-DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQR 286
++ +SG + + I E G + D L++ L+P S +N +I G+
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTS-TYNTLIKGYGIA 163
Query: 287 GAVNEALEVLE---EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 343
G + E+L+ E + P++ ++N+L+ A+CKK V C ++P
Sbjct: 164 GKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDT 223
Query: 344 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 403
V Y + I C + KG+ + +S V +++ +PN C ++ +CREG+ R+ L
Sbjct: 224 VTYNT-IATCYVQ-KGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLR 281
Query: 404 LLEDFHEQGINLNQ----------------------------YSYNEIIHMICKESYPKM 435
+ E + N S+NE + ++ + KM
Sbjct: 282 FVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQ---KM 338
Query: 436 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
++++ M + NV V+ YST+++ ++ E ++F +VKAG+ + Y+ L
Sbjct: 339 KVQVLTLMKECNVKADVITYSTVMNAWSS-AGYMEKAAQVFKEMVKAGVKPDAHAYSILA 397
Query: 496 SIHGRTRKRHKAYCRFGEMIQSCLC---PDEVSYTALIAVFCNIREMNVACALFQEMSRI 552
+ R ++ KA E++++ + P+ V +T +I+ +C+ M+ A +F +M +
Sbjct: 398 KGYVRAKEPKKAE----ELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKF 453
Query: 553 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 612
G PN+ T+ L+ G+ ++ A ++ M+ G+ P+ T+ +L + G E
Sbjct: 454 GVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDES 513
Query: 613 NKLFGEMKANCILLDDGIKKLQDPKLVQFKNVG 645
NK +K D I KL+ KL Q ++ G
Sbjct: 514 NKAINALKCK----DIEIAKLE--KLYQKQSSG 540
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 183/424 (43%), Gaps = 45/424 (10%)
Query: 124 EQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLX 183
EQ T LD + FN +I F+ + +E A Q + K +GL + N L+K
Sbjct: 107 EQSGTKLD-----SIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYG 161
Query: 184 XXXXXXXXXXXXXXLMETGPL---PNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNP 236
++E G + PNI T+ +++ + A E++ K+ G P
Sbjct: 162 IAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP 221
Query: 237 TVVTYGT----YI-RGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 291
VTY T Y+ +G +V K+V K K N V+ G+C+ G V +
Sbjct: 222 DTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAK---PNGRTCGIVVGGYCREGRVRD 278
Query: 292 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYT-SLI 350
L + MK R ++ +N L+N F + D + I T +L+
Sbjct: 279 GLRFVRRMKEMRVEANLVVFNSLINGFVEVMD----------------RDGIDEVTLTLL 322
Query: 351 LLCKN---KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 407
L+ N +L G Q ++V M + ++ + I + ++ G +A + ++
Sbjct: 323 LMSFNEEVELVGNQ--KMKVQVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKE 380
Query: 408 FHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS 467
+ G+ + ++Y+ + + PK A EL+ ++ + P VV ++T+ISG+ S
Sbjct: 381 MVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGS 439
Query: 468 NFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYT 527
+ R+F ++ K G++ N KT+ TL+ + ++ KA +M++ C E S
Sbjct: 440 -MDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAE-EVLQMMRGCGVKPENSTF 497
Query: 528 ALIA 531
L+A
Sbjct: 498 LLLA 501
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 119/554 (21%), Positives = 219/554 (39%), Gaps = 36/554 (6%)
Query: 78 VETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVG----------------YCKCDD 121
++ GFS V + +I FA +G + E + + + + K
Sbjct: 199 LQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGT 258
Query: 122 SFEQFSTLL-----DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCN 176
+ + ++L+ D +N LI S+ + A QVF K G + N
Sbjct: 259 PWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYN 318
Query: 177 FLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRS 232
LL ++ G P+I TY ++S G + A E+ ++
Sbjct: 319 ALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEK 378
Query: 233 GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEA 292
G P V TY T + G G V+ A + ++ N FNA I + RG E
Sbjct: 379 GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 293 LEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL 352
+++ +E+ PD+ ++N LL F + G P + +LI
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 353 ---CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFH 409
C + +++++ VY ML + P+ N +L R G + ++ +L +
Sbjct: 499 YSRCGS-------FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Query: 410 EQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNF 469
+ N+ +Y ++H + L + + P V TL+ +K
Sbjct: 552 DGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLP 611
Query: 470 EMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTAL 529
E ER F+ L + G + + T +++SI+GR + KA M + P +Y +L
Sbjct: 612 E-AERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSL 670
Query: 530 IAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 589
+ + + + + +E+ G P++ +Y +I +C+ + A+++F EM+ GI
Sbjct: 671 MYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGI 730
Query: 590 FPDVVTYTVLIAWY 603
PDV+TY I Y
Sbjct: 731 VPDVITYNTFIGSY 744
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/454 (20%), Positives = 188/454 (41%), Gaps = 9/454 (1%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
S++ +N LI +A + ML+ A ++ G + + + LL
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIF 407
Query: 196 XXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
+ G PNI T+ + G +I +I G +P +VT+ T + +
Sbjct: 408 EEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQN 467
Query: 252 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 311
G + +++ FN +I + + G+ +A+ V M + PD+ +Y
Sbjct: 468 GMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTY 527
Query: 312 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYN 371
N +L A + G + KP+ + Y SL+ N + ++ + EVY+
Sbjct: 528 NTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYS 587
Query: 372 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 431
+ I P ++ ++ V + EA + E+G + + + N ++ + +
Sbjct: 588 GV----IEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQ 643
Query: 432 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
A ++ M +R P + Y++L+ ++ ++F E + ++ GI + +Y
Sbjct: 644 MVAKANGVLDYMKERGFTPSMATYNSLMYMHSR-SADFGKSEEILREILAKGIKPDIISY 702
Query: 492 TTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR 551
T+I + R + A F EM S + PD ++Y I + A + + M +
Sbjct: 703 NTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIK 762
Query: 552 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 585
GC PN TY ++DG+CK++ D A ++++
Sbjct: 763 HGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 168/375 (44%), Gaps = 16/375 (4%)
Query: 271 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 330
L++ +I + G V+ A + ++ DVYSY L++AF G
Sbjct: 171 LDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNV 230
Query: 331 XXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 390
KP+++ Y ++IL K+ ++K + M + I P+ N ++
Sbjct: 231 FKKMEEDGCKPTLITY-NVILNVFGKMGTP--WNKITSLVEKMKSDGIAPDAYTYNTLIT 287
Query: 391 VHCREGQF-REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL 449
C+ G +EA + E+ G + ++ +YN ++ + K PK A++++ M+
Sbjct: 288 C-CKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFS 346
Query: 450 PGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYC 509
P +V Y++LIS +A++ E +E L ++ + G + TYTTL+S R K A
Sbjct: 347 PSIVTYNSLISAYARDGMLDEAME-LKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMS 405
Query: 510 RFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 569
F EM + P+ ++ A I ++ N + +F E++ G P++ T+ L+ F
Sbjct: 406 IFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFG 465
Query: 570 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDG 629
+ + +F EMKR G P+ T+ LI+ Y + G + ++ M LD G
Sbjct: 466 QNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRM------LDAG 519
Query: 630 IKKLQDPKLVQFKNV 644
+ P L + V
Sbjct: 520 VT----PDLSTYNTV 530
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 120/255 (47%), Gaps = 7/255 (2%)
Query: 370 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 429
Y SML N++ I+ + +EG+ A + E G +L+ YSY +I
Sbjct: 167 YQSMLDNSV------VAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFAN 220
Query: 430 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTK 489
+ A+ + +M + P ++ Y+ +++ F K + + + L ++ GI +
Sbjct: 221 SGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAY 280
Query: 490 TYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM 549
TY TLI+ R +A F EM + D+V+Y AL+ V+ A + EM
Sbjct: 281 TYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEM 340
Query: 550 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
G P++ TY LI + + +D A +L ++M KG PDV TYT L++ + + G++
Sbjct: 341 VLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKV 400
Query: 610 GEKNKLFGEMK-ANC 623
+F EM+ A C
Sbjct: 401 ESAMSIFEEMRNAGC 415
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/415 (21%), Positives = 172/415 (41%), Gaps = 39/415 (9%)
Query: 245 IRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRT 304
I L + G V A + L L+ + + ++I F G EA+ V ++M+
Sbjct: 180 ISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGC 239
Query: 305 FPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ-IKPSIVNYTSLILLCKNKLKGQQLY 363
P + +YN++LN F K G I P Y +LI CK L+
Sbjct: 240 KPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRG----SLH 295
Query: 364 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 423
++ +V+ M + + N +L V+ + + +EA+ +L + G + + +YN +
Sbjct: 296 QEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 424 IHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF---AKEQSNFEMVERL----- 475
I ++ A+EL +M ++ P V Y+TL+SGF K +S + E +
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Query: 476 -------------------FTRLVKA-------GITFNTKTYTTLISIHGRTRKRHKAYC 509
FT ++K G++ + T+ TL+++ G+ +
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 475
Query: 510 RFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 569
F EM ++ P+ ++ LI+ + A +++ M G P+L TY ++
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA 535
Query: 570 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 624
+ + + ++ EM+ P+ +TY L+ Y IG + L E+ + I
Sbjct: 536 RGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVI 590
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 188/416 (45%), Gaps = 10/416 (2%)
Query: 198 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
L+E G P++ TYT +++ ++ K+ ++G P + + I E G
Sbjct: 345 LIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 404
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM-KSSRTFPDVYSYN 312
+D A K+ K+ + FN +I G+ + G + E+ +L+ M + P+ + N
Sbjct: 405 LDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCN 464
Query: 313 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNS 372
+L+ A+C + + +KP +V + +L K + +
Sbjct: 465 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTL---AKAYARIGSTCTAEDMIIPR 521
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
ML N ++PN C I+ +C EG+ EAL E G++ N + +N +I +
Sbjct: 522 MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 581
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
E++ M + V P VV +STL++ ++ + + E ++T +++ GI + ++
Sbjct: 582 MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWS-SVGDMKRCEEIYTDMLEGGIDPDIHAFS 640
Query: 493 TLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI 552
L + R + KA +M + + P+ V YT +I+ +C+ EM A ++++M I
Sbjct: 641 ILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGI 700
Query: 553 -GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 607
G PNL TY LI GF + A +L +M+ K + P T ++ + G
Sbjct: 701 VGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/423 (19%), Positives = 181/423 (42%), Gaps = 58/423 (13%)
Query: 215 SCGDIRL----------------AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAH 258
+CGD+R A I + G P+++TY T + L +
Sbjct: 315 TCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLL 374
Query: 259 KLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAF 318
L+ K+ ++ FNA+I+ + G +++A+++ E+MK S P ++N L+ +
Sbjct: 375 SLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGY 434
Query: 319 CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA- 377
K G + ++S + + ML++
Sbjct: 435 GKIGKL---------------------------------------EESSRLLDMMLRDEM 455
Query: 378 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 437
++PN CN +++ C + + EA ++ G+ + ++N + + A
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAE 515
Query: 438 ELM-PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLIS 496
+++ PRML V P V T+++G+ E+ E R F R+ + G+ N + +LI
Sbjct: 516 DMIIPRMLHNKVKPNVRTCGTIVNGYC-EEGKMEEALRFFYRMKELGVHPNLFVFNSLIK 574
Query: 497 IHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLP 556
M + + PD V+++ L+ + ++ +M ++ +M G P
Sbjct: 575 GFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDP 634
Query: 557 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 616
+++ ++ L G+ + + A Q+ ++M++ G+ P+VV YT +I+ + G + + +++
Sbjct: 635 DIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVY 694
Query: 617 GEM 619
+M
Sbjct: 695 KKM 697
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/348 (22%), Positives = 144/348 (41%), Gaps = 13/348 (3%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
++FN +I + + L+ A ++F K G + + N L+K
Sbjct: 388 DTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLL 447
Query: 196 XXLMETGPL-PNIHTYTIMMSCG----DIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE 250
++ L PN T I++ I A I+ K+ G P VVT+ T +
Sbjct: 448 DMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYAR 507
Query: 251 CGYVDVAHKLV--RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDV 308
G A ++ R LH K+ P N +++G+C+ G + EAL MK P++
Sbjct: 508 IGSTCTAEDMIIPRMLHNKVKP-NVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNL 566
Query: 309 YSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLE 368
+ +N L+ F D+ +KP +V +++L+ N + E
Sbjct: 567 FVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLM----NAWSSVGDMKRCEE 622
Query: 369 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 428
+Y ML+ I P+ + + + + R G+ +A +L + G+ N Y +II C
Sbjct: 623 IYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWC 682
Query: 429 KESYPKMALELMPRMLK-RNVLPGVVNYSTLISGFAKEQSNFEMVERL 475
K A+++ +M + P + Y TLI GF + + ++ E L
Sbjct: 683 SAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELL 730
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 98/214 (45%), Gaps = 11/214 (5%)
Query: 115 GYC---KCDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLEL 170
GYC K +++ F + +L H ++ VFN LIK F + + ++ +V + G++
Sbjct: 540 GYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKP 599
Query: 171 HIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLAAEIL 226
+ + + L+ ++E G P+IH ++I+ G+ A +IL
Sbjct: 600 DVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQIL 659
Query: 227 GKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPL--NSHCFNAVIHGFC 284
++ + G P VV Y I G C G + A ++ +K+ C + L N + +I GF
Sbjct: 660 NQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM-CGIVGLSPNLTTYETLIWGFG 718
Query: 285 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAF 318
+ +A E+L++M+ P + ++ + +
Sbjct: 719 EAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGW 752
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/519 (22%), Positives = 212/519 (40%), Gaps = 46/519 (8%)
Query: 119 CDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFL 178
C+D F Q S L P S ++N +I ++ L+ A+ F ++ G + + N L
Sbjct: 164 CNDVFAQISFLGMKP--STRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNIL 221
Query: 179 LKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGG 234
+ + + + G PN+ TYTI++ G + A + L +
Sbjct: 222 IHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKL 281
Query: 235 NPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE 294
NP T T++ G+ C A +++ K L ++AV++ E +
Sbjct: 282 NPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQ 341
Query: 295 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 354
L ++ PD ++N ++ K D+ +KP Y L+
Sbjct: 342 FLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLV---- 397
Query: 355 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 414
L NA R F E L+ G+
Sbjct: 398 -----------------QALLNAQR------------------FSEGDRYLKQMGVDGLL 422
Query: 415 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVER 474
+ YSYN +I +CK + A + M R + P +V ++T +SG++ + + + V
Sbjct: 423 SSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSV-RGDVKKVHG 481
Query: 475 LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFC 534
+ +L+ G + T++ +I+ R ++ A+ F EM++ + P+E++Y LI C
Sbjct: 482 VLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCC 541
Query: 535 NIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 594
+ + + + LF +M G P+LY Y I FCK+ + A +L M R G+ PD
Sbjct: 542 STGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNF 601
Query: 595 TYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKL 633
TY+ LI + GR E ++F ++ + + D K+L
Sbjct: 602 TYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKRL 640
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 166/392 (42%), Gaps = 6/392 (1%)
Query: 237 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL 296
TV I+ + G V+ + RK+ + +N +++G V+ A V
Sbjct: 186 TVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVF 245
Query: 297 EEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNK 356
E M+S R PD+ +YN ++ +CK G + + Y ++I C
Sbjct: 246 EVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACY-- 303
Query: 357 LKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLN 416
+ + +Y M + I+ + ++ C+EG+ E T+ E+ +G N
Sbjct: 304 --ADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPN 361
Query: 417 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLF 476
Y +I K + A+ L+ RM+ P VV YS +++G K E ++
Sbjct: 362 VAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFH 421
Query: 477 TRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNI 536
T G+ N+ Y++LI G+ + +A F EM + D Y ALI F
Sbjct: 422 TCRFD-GLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKH 480
Query: 537 REMNVACALFQEMSRI-GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVT 595
R+++ A ALF+ M GC +YTYT L+ G K + A +L+D M KGI P
Sbjct: 481 RKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAAC 540
Query: 596 YTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
+ L G++ K+ E+ ++LD
Sbjct: 541 FRALSTGLCLSGKVARACKILDELAPMGVILD 572
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 139/351 (39%), Gaps = 40/351 (11%)
Query: 270 PLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXX 329
P+ NA+I F + G V E L V +MK + P +Y+YN L+N
Sbjct: 184 PMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNG------------ 231
Query: 330 XXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHIL 389
L D + V+ M I+P+ + N ++
Sbjct: 232 ---------------------------LVSAMFVDSAERVFEVMESGRIKPDIVTYNTMI 264
Query: 390 RVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL 449
+ +C+ GQ ++A+ L D +G ++ +Y +I +S + L M ++ +
Sbjct: 265 KGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQ 324
Query: 450 PGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYC 509
+S +I G KE E +F +++ G N YT LI + ++ A
Sbjct: 325 VPPHAFSLVIGGLCKEGKLNEGYT-VFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIR 383
Query: 510 RFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 569
MI PD V+Y+ ++ C + A F G N Y+ LIDG
Sbjct: 384 LLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLG 443
Query: 570 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
K +D A +LF+EM KG D Y LI + KH ++ E LF M+
Sbjct: 444 KAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRME 494
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 116/515 (22%), Positives = 200/515 (38%), Gaps = 52/515 (10%)
Query: 103 HLEVFALLRDIVGYCKCDDSFEQFSTLL---DLPHHSVLVFNVLIKVFASNSMLEHAHQV 159
+LE + L D++ K D S+ + + P +V N LIK F M+E V
Sbjct: 151 NLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPM-TVSAANALIKSFGKLGMVEELLWV 209
Query: 160 FVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPL-PNIHTYTIMMS--- 215
+ K G+E + + NFL+ L +ME+G + P+I TY M+
Sbjct: 210 WRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFE-VMESGRIKPDIVTYNTMIKGYC 268
Query: 216 -CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSH 274
G + A E L + G +TY T I+ L +++ K + H
Sbjct: 269 KAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPH 328
Query: 275 CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 334
F+ VI G C+ G +NE V E M + P+V Y +L++ + K G V
Sbjct: 329 AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSV---------- 378
Query: 335 XXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 394
+ ++ + + M+ +P+ + + ++ C+
Sbjct: 379 -----------------------------EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCK 409
Query: 395 EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 454
G+ EAL G+ +N Y+ +I + K A L M ++
Sbjct: 410 NGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYC 469
Query: 455 YSTLISGFAKEQSNFEMVERLFTRL-VKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE 513
Y+ LI F K + E + LF R+ + G TYT L+S + + +A +
Sbjct: 470 YNALIDAFTKHRKVDEAIA-LFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDM 528
Query: 514 MIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 573
MI + P + AL C ++ AC + E++ +G + + +I+ CK
Sbjct: 529 MIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAACED-MINTLCKAGR 587
Query: 574 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 608
I A +L D + +G TV+I K G+
Sbjct: 588 IKEACKLADGITERGREVPGRIRTVMINALRKVGK 622
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 159/327 (48%), Gaps = 19/327 (5%)
Query: 198 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++ETG P++ T+T +M+ G + A ++ ++ G P YGT I GLC+ G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 254 VDVAHKLVRKL---HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 310
+ A L+ K+ H K H + +NA+I C+ G A + EM FPDV +
Sbjct: 57 TESALNLLSKMEETHIKAHVV---IYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVIT 113
Query: 311 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVY 370
Y+ ++++FC+ G QI P +V +++LI N L + ++ E+Y
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALI----NALVKEGKVSEAEEIY 169
Query: 371 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 430
ML+ I P TI N ++ C++ + +A +L+ + + + +++ +I+ CK
Sbjct: 170 GDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKA 229
Query: 431 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKT 490
+E+ M +R ++ V Y+TLI GF + + + + L ++ +G+ N T
Sbjct: 230 KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFC-QVGDLDAAQDLLNVMISSGVAPNYIT 288
Query: 491 YTTLISIHGRTRKRHKAYCRFGEMIQS 517
+ ++++ ++ KA+ ++ +S
Sbjct: 289 FQSMLASLCSKKELRKAFAILEDLQKS 315
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 139/282 (49%), Gaps = 13/282 (4%)
Query: 340 KPSIVNYTSLI--LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQ 397
+P +V +T+L+ L C+ ++ ++L + + M++ +P I N + C+ G
Sbjct: 7 RPDVVTFTTLMNGLCCEGRVL------QALALVDRMVEEGHQPYGTIINGL----CKMGD 56
Query: 398 FREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYST 457
AL LL E I + YN II +CK+ + A L M + + P V+ YS
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 458 LISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQS 517
+I F + + E+L +++ I + T++ LI+ + K +A +G+M++
Sbjct: 117 MIDSFCR-SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 518 CLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLA 577
+ P ++Y ++I FC +N A + M+ C P++ T++ LI+G+CK +D
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 578 TQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
++F EM R+GI + VTYT LI + + G + L M
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVM 277
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 141/296 (47%), Gaps = 9/296 (3%)
Query: 306 PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDK 365
PDV ++ L+N C +G V +P Y ++I N L +
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTII----NGLCKMGDTES 59
Query: 366 SLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIH 425
+L + + M + I+ + +I N I+ C++G A L + H++GI + +Y+ +I
Sbjct: 60 ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMID 119
Query: 426 MICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGIT 485
C+ A +L+ M++R + P VV +S LI+ KE E E ++ +++ GI
Sbjct: 120 SFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSE-AEEIYGDMLRRGIF 178
Query: 486 FNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACAL 545
T TY ++I + + + A M PD V+++ LI +C + ++ +
Sbjct: 179 PTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEI 238
Query: 546 FQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 601
F EM R G + N TYT LI GFC++ +D A L + M G+ P+ +T+ ++A
Sbjct: 239 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLA 294
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 148/312 (47%), Gaps = 11/312 (3%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
F +++G C G V +AL +++ M P Y ++N CK GD
Sbjct: 13 FTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKME 68
Query: 336 XCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 394
IK +V Y ++I LCK+ G ++ ++L + M I P+ I + ++ CR
Sbjct: 69 ETHIKAHVVIYNAIIDRLCKD---GHHIHAQNL--FTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 395 EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 454
G++ +A LL D E+ IN + +++ +I+ + KE A E+ ML+R + P +
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 455 YSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEM 514
Y+++I GF K Q +R+ + + + T++TLI+ + + ++ F EM
Sbjct: 184 YNSMIDGFCK-QDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 242
Query: 515 IQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 574
+ + + V+YT LI FC + +++ A L M G PN T+ ++ C +
Sbjct: 243 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKEL 302
Query: 575 DLATQLFDEMKR 586
A + +++++
Sbjct: 303 RKAFAILEDLQK 314
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 158/334 (47%), Gaps = 31/334 (9%)
Query: 229 IYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGA 288
+ +G P VVT+ T + GLC G V A LV ++ + H + +I+G C+ G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGH----QPYGTIINGLCKMGD 56
Query: 289 VNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTS 348
AL +L +M+ + V YN +++ CK G I P ++ Y+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 349 LI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 407
+I C++ + + ++ M++ I P+ + + ++ +EG+ EA + D
Sbjct: 117 MIDSFCRSG-----RWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGD 171
Query: 408 FHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS 467
+GI +YN +I CK+ A ++ M ++ P VV +STLI+G+ K +
Sbjct: 172 MLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKR 231
Query: 468 NFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE----------MIQS 517
+E +F + + GI NT TYTTL IHG +C+ G+ MI S
Sbjct: 232 VDNGME-IFCEMHRRGIVANTVTYTTL--IHG--------FCQVGDLDAAQDLLNVMISS 280
Query: 518 CLCPDEVSYTALIAVFCNIREMNVACALFQEMSR 551
+ P+ +++ +++A C+ +E+ A A+ +++ +
Sbjct: 281 GVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 126/247 (51%), Gaps = 5/247 (2%)
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
M++ RP+ + ++ C EG+ +AL L++ E+G Y II+ +CK
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEG----HQPYGTIINGLCKMGD 56
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
+ AL L+ +M + ++ VV Y+ +I K+ + + LFT + GI + TY+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIH-AQNLFTEMHDKGIFPDVITYS 115
Query: 493 TLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI 552
+I R+ + A +MI+ + PD V+++ALI +++ A ++ +M R
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 553 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 612
G P TY +IDGFCK D ++ A ++ D M K PDVVT++ LI Y K R+
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 613 NKLFGEM 619
++F EM
Sbjct: 236 MEIFCEM 242
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/353 (19%), Positives = 138/353 (39%), Gaps = 60/353 (16%)
Query: 78 VETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIV------------GYCKCDDSFEQ 125
VET G V F +++ G L+ AL+ +V G CK D+
Sbjct: 2 VET-GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESA 60
Query: 126 FSTLLDLPH----HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKC 181
+ L + V+++N +I + HA +F + G+ + + + ++
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 182 LXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPT 237
++E P++ T++ +++ G + A EI G + R G PT
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 238 VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 297
+TY + I G C+ ++ A +++ + K + F+ +I+G+C+ V+ +E+
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 298 EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKL 357
EM + +Y L++ FC+ GD+
Sbjct: 241 EMHRRGIVANTVTYTTLIHGFCQVGDL--------------------------------- 267
Query: 358 KGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHE 410
D + ++ N M+ + + PN I +L C + + R+A +LED +
Sbjct: 268 ------DAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/446 (22%), Positives = 181/446 (40%), Gaps = 35/446 (7%)
Query: 207 IHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHC 266
IH Y + D+ A + K+ G ++VTY + G + G+ + A +
Sbjct: 351 IHAYAVGR---DMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKR 407
Query: 267 KLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXX 326
LN+ + +I+ CQ + A ++ EM+ + Y+ +++ + D
Sbjct: 408 IHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKK 467
Query: 327 XXXXXXXXXXCQIKPSIVNYTSLILL---------------------CKNKLKGQQL--- 362
C P++V Y LI L K+ LK +
Sbjct: 468 GLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMIN 527
Query: 363 -------YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 415
+ + V+ M++ ++P+ I+ N+I+ C G A+ +++ +
Sbjct: 528 GFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRP 587
Query: 416 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 475
++ IIH K + +LE+ M + +P V ++ LI+G E+ E +
Sbjct: 588 TTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLV-EKRQMEKAVEI 646
Query: 476 FTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCN 535
+ AG++ N TYT ++ + KA+ F + L D +Y AL+ C
Sbjct: 647 LDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCK 706
Query: 536 IREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVT 595
M A A+ +EMS N + Y LIDG+ + + A L +MK++G+ PD+ T
Sbjct: 707 SGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHT 766
Query: 596 YTVLIAWYHKHGRIGEKNKLFGEMKA 621
YT I+ K G + + EM+A
Sbjct: 767 YTSFISACSKAGDMNRATQTIEEMEA 792
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 126/579 (21%), Positives = 228/579 (39%), Gaps = 21/579 (3%)
Query: 33 HANSEFNLSSVSPVPETNRELFHVVVRVIKSLNWKIAREKKFGSWVETHGFSHSVNYFRI 92
H E + S+ + +TN + + V+ + ++ K +R +FG V+ +G ++ R
Sbjct: 273 HQEREGSRKSLQRILDTNGDNWQAVISAFEKIS-KPSR-TEFGLMVKFYGRRGDMHRARE 330
Query: 93 IIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHH----SVLVFNVLIKVFA 148
G+ I Y D E S + + S++ ++V++ F+
Sbjct: 331 TFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFS 390
Query: 149 SNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIH 208
E A F AK + L+ ++ + E G I
Sbjct: 391 KAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIA 450
Query: 209 TYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKL 264
Y MM D + + ++ G PTVVTYG I + G + A ++ R +
Sbjct: 451 IYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVM 510
Query: 265 HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDV 324
+ N ++ +I+GF + A V E+M PDV YN +++AFC G++
Sbjct: 511 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNM 570
Query: 325 XXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTII 384
+ +P+ + +I + +SLEV++ M + P
Sbjct: 571 DRAIQTVKEMQKLRHRPTTRTFMPII----HGYAKSGDMRRSLEVFDMMRRCGCVPTVHT 626
Query: 385 CNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRML 444
N ++ + Q +A+ +L++ G++ N+++Y +I+ A E R+
Sbjct: 627 FNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQ 686
Query: 445 KRNVLPGVVNYSTLISGFAKE---QSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRT 501
+ + Y L+ K QS + + + R I N+ Y LI R
Sbjct: 687 NEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR----NIPRNSFVYNILIDGWARR 742
Query: 502 RKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTY 561
+A +M + + PD +YT+ I+ +MN A +EM +G PN+ TY
Sbjct: 743 GDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTY 802
Query: 562 TCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
T LI G+ + + A ++EMK GI PD Y L+
Sbjct: 803 TTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 122/569 (21%), Positives = 231/569 (40%), Gaps = 53/569 (9%)
Query: 55 HVVVRVIKSLNWKIAREKKFGSWV-ETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDI 113
H +VR I ++ +I + +F W + F H + + +I A ++ E++ ++++
Sbjct: 93 HRLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEV 152
Query: 114 VGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIR 173
V +T + + S V + L+K M+ A VF AK R
Sbjct: 153 VR-----------NTYVSV---SPAVLSELVKALGRAKMVSKALSVFYQAKG-------R 191
Query: 174 SCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIH-TYTIMMSCGDIRLAAEILGKIYRS 232
C LM+ G +H YT M + GD
Sbjct: 192 KCK---------PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCF------------ 230
Query: 233 GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEA 292
P +TY I + G D A +L ++ + ++ + + G V +A
Sbjct: 231 ---PDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA 287
Query: 293 LEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL 352
L++ EEMK + P VY+Y L+ K G V + P +V +L+ +
Sbjct: 288 LDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNI 347
Query: 353 CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR-VHCREGQFREALTLLEDFHEQ 411
+ ++L + V++ M P + N +++ + + E + +
Sbjct: 348 LGKVGRVEELTN----VFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKAD 403
Query: 412 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEM 471
++ ++++Y+ +I CK + + AL L+ M ++ P Y +LI+ K + +E
Sbjct: 404 SVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAK-RYEA 462
Query: 472 VERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIA 531
LF L + +++ Y +I G+ K +A F EM PD +Y AL++
Sbjct: 463 ANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMS 522
Query: 532 VFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFP 591
+N A +L ++M GC ++ ++ +++GF + A ++F+ +K GI P
Sbjct: 523 GMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKP 582
Query: 592 DVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
D VTY L+ + G E ++ EMK
Sbjct: 583 DGVTYNTLLGCFAHAGMFEEAARMMREMK 611
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 171/421 (40%), Gaps = 45/421 (10%)
Query: 212 IMMSCGDIRLAAEILGKIYRSGG---NPTVVTYGTYIRGLCECGYVDVAHKLVRKL--HC 266
++ + G ++ ++ L Y++ G PT TY + I L + G + H++ ++
Sbjct: 168 LVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEG 227
Query: 267 KLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXX 326
P ++ ++A+I + + G + A+ + +EMK + P Y LL + K G V
Sbjct: 228 DCFP-DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEK 286
Query: 327 XXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICN 386
P++ YT LI L D++ Y ML++ + P+ + N
Sbjct: 287 ALDLFEEMKRAGCSPTVYTYTELI----KGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLN 342
Query: 387 HILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKR 446
+++ + + G+ E L F E G+
Sbjct: 343 NLMNILGKVGRVEE---LTNVFSEMGM--------------------------------W 367
Query: 447 NVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHK 506
P VV+Y+T+I + +++ V F ++ ++ + TY+ LI + +T + K
Sbjct: 368 RCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEK 427
Query: 507 AYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLID 566
A EM + P +Y +LI + A LF+E+ + Y +I
Sbjct: 428 ALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIK 487
Query: 567 GFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILL 626
F K + A LF+EMK +G PDV Y L++ K G I E N L +M+ N
Sbjct: 488 HFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRA 547
Query: 627 D 627
D
Sbjct: 548 D 548
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 152/376 (40%), Gaps = 12/376 (3%)
Query: 203 PLPNIHT--YTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 260
P I+T I G + A ++ ++ R+G +PTV TY I+GL + G VD A+
Sbjct: 266 PTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGF 325
Query: 261 VRK-LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA-F 318
+ L L P + N +++ + G V E V EM R P V SYN ++ A F
Sbjct: 326 YKDMLRDGLTP-DVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALF 384
Query: 319 CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNA 377
K V + PS Y+ LI CK +K+L + M +
Sbjct: 385 ESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKT-----NRVEKALLLLEEMDEKG 439
Query: 378 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 437
P ++ + ++ A L ++ E N++ Y +I K A+
Sbjct: 440 FPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAV 499
Query: 438 ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISI 497
+L M + P V Y+ L+SG K L ++ + G + ++ +++
Sbjct: 500 DLFNEMKNQGSGPDVYAYNALMSGMVK-AGMINEANSLLRKMEENGCRADINSHNIILNG 558
Query: 498 HGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPN 557
RT +A F + S + PD V+Y L+ F + A + +EM G +
Sbjct: 559 FARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYD 618
Query: 558 LYTYTCLIDGFCKIDY 573
TY+ ++D +D+
Sbjct: 619 AITYSSILDAVGNVDH 634
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 144/351 (41%), Gaps = 24/351 (6%)
Query: 82 GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFN 141
G S +V + +I AG E + +D+ L D V+ N
Sbjct: 298 GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM---------------LRDGLTPDVVFLN 342
Query: 142 VLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMET 201
L+ + +E VF + S N ++K L M+
Sbjct: 343 NLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKA 402
Query: 202 GPL-PNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDV 256
+ P+ TY+I++ C R+ A +L ++ G P Y + I L + +
Sbjct: 403 DSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEA 462
Query: 257 AHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLN 316
A++L ++L ++S + +I F + G ++EA+++ EMK+ + PDVY+YN L++
Sbjct: 463 ANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMS 522
Query: 317 AFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQN 376
K G + + I N ++IL N + +++E++ ++ +
Sbjct: 523 GMVKAGMINEANSLLRKMEENGCRADI-NSHNIIL---NGFARTGVPRRAIEMFETIKHS 578
Query: 377 AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
I+P+ + N +L G F EA ++ + ++G + +Y+ I+ +
Sbjct: 579 GIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 104/496 (20%), Positives = 215/496 (43%), Gaps = 13/496 (2%)
Query: 139 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 198
++N++I++ A ++ ++ A +F + + + + L+ +
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 199 METGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 254
+ P+ TY ++ S G+ R A E+ K+ +G P +VT+ +
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 255 DVAHKLVRKLH-CKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRT--FPDVYSY 311
A + K+ P ++ FN +I+ + G ++AL++ M+ R PDV ++
Sbjct: 265 SKALSYFELMKGAKVRP-DTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 323
Query: 312 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYN 371
+++ + KG++ +KP+IV+Y +L+ + +L V
Sbjct: 324 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM----GAYAVHGMSGTALSVLG 379
Query: 372 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 431
+ QN I P+ + +L + R Q +A + ++ N +YN +I
Sbjct: 380 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 439
Query: 432 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
+ A+E+ +M + + P VV+ TL++ ++ + V+ + + GI NT Y
Sbjct: 440 FLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVN-VDTVLSAAQSRGINLNTAAY 498
Query: 492 TTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR 551
+ I + + KA + M + + D V++T LI+ C + + A + +EM
Sbjct: 499 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 558
Query: 552 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
+ Y+ ++ + K + A +F++MK G PDV+ YT ++ Y+ + G+
Sbjct: 559 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK 618
Query: 612 KNKLFGEMKANCILLD 627
+LF EM+AN I D
Sbjct: 619 ACELFLEMEANGIEPD 634
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 142/365 (38%), Gaps = 46/365 (12%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRS-CNFLLKCLXXXXXXXXXXXX 194
+V+ +N LI + SN L A ++F + G++ ++ S C L C
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKV------ 477
Query: 195 XXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 254
N+ T +L G N Y + I +
Sbjct: 478 -----------NVDT---------------VLSAAQSRGINLNTAAYNSAIGSYINAAEL 511
Query: 255 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 314
+ A L + + K +S F +I G C+ EA+ L+EM+ Y+ +
Sbjct: 512 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSV 571
Query: 315 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML 374
L A+ K+G V +P ++ YTS++ + + + K+ E++ M
Sbjct: 572 LCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML----HAYNASEKWGKACELFLEME 627
Query: 375 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 434
N I P++I C+ ++R + GQ L++ E+ I + EI K
Sbjct: 628 ANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWK 687
Query: 435 MALELMPRMLKRNVLP----GVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKT 490
A++L+ M LP G+ N ++ F K E + +LF +++ +G+ N KT
Sbjct: 688 RAIDLIQMM--DPYLPSLSIGLTN--QMLHLFGK-SGKVEAMMKLFYKIIASGVGINLKT 742
Query: 491 YTTLI 495
Y L+
Sbjct: 743 YAILL 747
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 149/349 (42%), Gaps = 40/349 (11%)
Query: 277 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 336
NA + +G V+ AL EM+ + P+ Y+ NM+++ +C+ G +
Sbjct: 207 NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKL------------ 254
Query: 337 CQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREG 396
DK +E+ M + R + N ++ HC +G
Sbjct: 255 ---------------------------DKGIELLQDMERLGFRATDVSYNTLIAGHCEKG 287
Query: 397 QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYS 456
AL L + G+ N ++N +IH C+ + A ++ M NV P V Y+
Sbjct: 288 LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYN 347
Query: 457 TLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQ 516
TLI+G++ +Q + EM R + +V GI + TY LI + K KA E+ +
Sbjct: 348 TLINGYS-QQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDK 406
Query: 517 SCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDL 576
L P+ +++ALI C + + L++ M R GC PN T+ L+ FC+ + D
Sbjct: 407 ENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 577 ATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 625
A+Q+ EM R+ I D T + G+ KL EM+ L
Sbjct: 467 ASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 127/271 (46%), Gaps = 1/271 (0%)
Query: 357 LKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLN 416
L GQ D +L Y M + I PN N ++ +CR G+ + + LL+D G
Sbjct: 213 LLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRAT 272
Query: 417 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLF 476
SYN +I C++ AL+L M K + P VV ++TLI GF + + ++F
Sbjct: 273 DVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK-LQEASKVF 331
Query: 477 TRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNI 536
+ + NT TY TLI+ + + A+ + +M+ + + D ++Y ALI C
Sbjct: 332 GEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQ 391
Query: 537 REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTY 596
+ A +E+ + +PN T++ LI G C D +L+ M R G P+ T+
Sbjct: 392 AKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTF 451
Query: 597 TVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
+L++ + ++ +++ EM I LD
Sbjct: 452 NMLVSAFCRNEDFDGASQVLREMVRRSIPLD 482
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 175/427 (40%), Gaps = 50/427 (11%)
Query: 73 KFGSWVETHG-FSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLD 131
+F +W +T SHS+ I++HT ++LRD++ D + F LL
Sbjct: 100 EFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLY 159
Query: 132 LPHH---SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXX 188
+ VF+ L K FA +A F+ K+ G + SCN + L
Sbjct: 160 SYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRV 219
Query: 189 XXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTY 244
+ PN +T ++MS G + E+L + R G T V+Y T
Sbjct: 220 DIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTL 279
Query: 245 IRGLCECGYVDVAHKLVRKL-HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSR 303
I G CE G + A KL + L P N FN +IHGFC+ + EA +V EMK+
Sbjct: 280 IAGHCEKGLLSSALKLKNMMGKSGLQP-NVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338
Query: 304 TFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLY 363
P+ +YN L+N + ++GD +
Sbjct: 339 VAPNTVTYNTLINGYSQQGD---------------------------------------H 359
Query: 364 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 423
+ + Y M+ N I+ + + N ++ C++ + R+A +++ ++ + N +++ +
Sbjct: 360 EMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSAL 419
Query: 424 IHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAG 483
I C EL M++ P ++ L+S F + + +F+ ++ +V+
Sbjct: 420 IMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNE-DFDGASQVLREMVRRS 478
Query: 484 ITFNTKT 490
I +++T
Sbjct: 479 IPLDSRT 485
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 1/238 (0%)
Query: 363 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 422
+ + + + M P CN + +G+ AL + I+ N Y+ N
Sbjct: 184 FRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNM 243
Query: 423 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKA 482
++ C+ +EL+ M + V+Y+TLI+G E+ +L + K+
Sbjct: 244 VMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC-EKGLLSSALKLKNMMGKS 302
Query: 483 GITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVA 542
G+ N T+ TLI R K +A FGEM + P+ V+Y LI + + +A
Sbjct: 303 GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMA 362
Query: 543 CALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
+++M G ++ TY LI G CK A Q E+ ++ + P+ T++ LI
Sbjct: 363 FRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 1/192 (0%)
Query: 436 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
A + +M LP V + + +S Q ++ R + + + I+ N T ++
Sbjct: 187 ATDTFMQMKDYGFLPTVESCNAYMSSLLG-QGRVDIALRFYREMRRCKISPNPYTLNMVM 245
Query: 496 SIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCL 555
S + R+ K K +M + +VSY LIA C ++ A L M + G
Sbjct: 246 SGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQ 305
Query: 556 PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL 615
PN+ T+ LI GFC+ + A+++F EMK + P+ VTY LI Y + G +
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRF 365
Query: 616 FGEMKANCILLD 627
+ +M N I D
Sbjct: 366 YEDMVCNGIQRD 377
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 66/168 (39%), Gaps = 35/168 (20%)
Query: 489 KTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQE 548
+ + +L +K A F +M P S A ++ +++A ++E
Sbjct: 169 RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE 228
Query: 549 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR---------------------- 586
M R PN YT ++ G+C+ +D +L +M+R
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 587 -------------KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 621
G+ P+VVT+ LI + + ++ E +K+FGEMKA
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 149/349 (42%), Gaps = 40/349 (11%)
Query: 277 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 336
NA + +G V+ AL EM+ + P+ Y+ NM+++ +C+ G +
Sbjct: 207 NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKL------------ 254
Query: 337 CQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREG 396
DK +E+ M + R + N ++ HC +G
Sbjct: 255 ---------------------------DKGIELLQDMERLGFRATDVSYNTLIAGHCEKG 287
Query: 397 QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYS 456
AL L + G+ N ++N +IH C+ + A ++ M NV P V Y+
Sbjct: 288 LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYN 347
Query: 457 TLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQ 516
TLI+G++ +Q + EM R + +V GI + TY LI + K KA E+ +
Sbjct: 348 TLINGYS-QQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDK 406
Query: 517 SCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDL 576
L P+ +++ALI C + + L++ M R GC PN T+ L+ FC+ + D
Sbjct: 407 ENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 577 ATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 625
A+Q+ EM R+ I D T + G+ KL EM+ L
Sbjct: 467 ASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 127/271 (46%), Gaps = 1/271 (0%)
Query: 357 LKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLN 416
L GQ D +L Y M + I PN N ++ +CR G+ + + LL+D G
Sbjct: 213 LLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRAT 272
Query: 417 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLF 476
SYN +I C++ AL+L M K + P VV ++TLI GF + + ++F
Sbjct: 273 DVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMK-LQEASKVF 331
Query: 477 TRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNI 536
+ + NT TY TLI+ + + A+ + +M+ + + D ++Y ALI C
Sbjct: 332 GEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQ 391
Query: 537 REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTY 596
+ A +E+ + +PN T++ LI G C D +L+ M R G P+ T+
Sbjct: 392 AKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTF 451
Query: 597 TVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
+L++ + ++ +++ EM I LD
Sbjct: 452 NMLVSAFCRNEDFDGASQVLREMVRRSIPLD 482
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 175/427 (40%), Gaps = 50/427 (11%)
Query: 73 KFGSWVETHG-FSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLD 131
+F +W +T SHS+ I++HT ++LRD++ D + F LL
Sbjct: 100 EFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLY 159
Query: 132 LPHH---SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXX 188
+ VF+ L K FA +A F+ K+ G + SCN + L
Sbjct: 160 SYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRV 219
Query: 189 XXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTY 244
+ PN +T ++MS G + E+L + R G T V+Y T
Sbjct: 220 DIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTL 279
Query: 245 IRGLCECGYVDVAHKLVRKL-HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSR 303
I G CE G + A KL + L P N FN +IHGFC+ + EA +V EMK+
Sbjct: 280 IAGHCEKGLLSSALKLKNMMGKSGLQP-NVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338
Query: 304 TFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLY 363
P+ +YN L+N + ++GD +
Sbjct: 339 VAPNTVTYNTLINGYSQQGD---------------------------------------H 359
Query: 364 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 423
+ + Y M+ N I+ + + N ++ C++ + R+A +++ ++ + N +++ +
Sbjct: 360 EMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSAL 419
Query: 424 IHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAG 483
I C EL M++ P ++ L+S F + + +F+ ++ +V+
Sbjct: 420 IMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNE-DFDGASQVLREMVRRS 478
Query: 484 ITFNTKT 490
I +++T
Sbjct: 479 IPLDSRT 485
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 103/238 (43%), Gaps = 1/238 (0%)
Query: 363 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 422
+ + + + M P CN + +G+ AL + I+ N Y+ N
Sbjct: 184 FRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNM 243
Query: 423 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKA 482
++ C+ +EL+ M + V+Y+TLI+G E+ +L + K+
Sbjct: 244 VMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHC-EKGLLSSALKLKNMMGKS 302
Query: 483 GITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVA 542
G+ N T+ TLI R K +A FGEM + P+ V+Y LI + + +A
Sbjct: 303 GLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMA 362
Query: 543 CALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
+++M G ++ TY LI G CK A Q E+ ++ + P+ T++ LI
Sbjct: 363 FRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALI 420
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 1/192 (0%)
Query: 436 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
A + +M LP V + + +S Q ++ R + + + I+ N T ++
Sbjct: 187 ATDTFMQMKDYGFLPTVESCNAYMSSLLG-QGRVDIALRFYREMRRCKISPNPYTLNMVM 245
Query: 496 SIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCL 555
S + R+ K K +M + +VSY LIA C ++ A L M + G
Sbjct: 246 SGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQ 305
Query: 556 PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL 615
PN+ T+ LI GFC+ + A+++F EMK + P+ VTY LI Y + G +
Sbjct: 306 PNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRF 365
Query: 616 FGEMKANCILLD 627
+ +M N I D
Sbjct: 366 YEDMVCNGIQRD 377
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 66/168 (39%), Gaps = 35/168 (20%)
Query: 489 KTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQE 548
+ + +L +K A F +M P S A ++ +++A ++E
Sbjct: 169 RVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYRE 228
Query: 549 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR---------------------- 586
M R PN YT ++ G+C+ +D +L +M+R
Sbjct: 229 MRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL 288
Query: 587 -------------KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 621
G+ P+VVT+ LI + + ++ E +K+FGEMKA
Sbjct: 289 LSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/496 (20%), Positives = 215/496 (43%), Gaps = 13/496 (2%)
Query: 139 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 198
++N++I++ A ++ ++ A +F + + + + L+ +
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 199 METGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 254
+ P+ TY ++ S G+ R A E+ K+ +G P +VT+ +
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 255 DVAHKLVRKLH-CKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRT--FPDVYSY 311
A + K+ P ++ FN +I+ + G ++AL++ M+ R PDV ++
Sbjct: 133 SKALSYFELMKGAKVRP-DTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 191
Query: 312 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYN 371
+++ + KG++ +KP+IV+Y +L+ + +L V
Sbjct: 192 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALM----GAYAVHGMSGTALSVLG 247
Query: 372 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 431
+ QN I P+ + +L + R Q +A + ++ N +YN +I
Sbjct: 248 DIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNG 307
Query: 432 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
+ A+E+ +M + + P VV+ TL++ ++ + V+ + + GI NT Y
Sbjct: 308 FLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVN-VDTVLSAAQSRGINLNTAAY 366
Query: 492 TTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR 551
+ I + + KA + M + + D V++T LI+ C + + A + +EM
Sbjct: 367 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 426
Query: 552 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
+ Y+ ++ + K + A +F++MK G PDV+ YT ++ Y+ + G+
Sbjct: 427 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGK 486
Query: 612 KNKLFGEMKANCILLD 627
+LF EM+AN I D
Sbjct: 487 ACELFLEMEANGIEPD 502
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 142/365 (38%), Gaps = 46/365 (12%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRS-CNFLLKCLXXXXXXXXXXXX 194
+V+ +N LI + SN L A ++F + G++ ++ S C L C
Sbjct: 292 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKV------ 345
Query: 195 XXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 254
N+ T +L G N Y + I +
Sbjct: 346 -----------NVDT---------------VLSAAQSRGINLNTAAYNSAIGSYINAAEL 379
Query: 255 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 314
+ A L + + K +S F +I G C+ EA+ L+EM+ Y+ +
Sbjct: 380 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSV 439
Query: 315 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML 374
L A+ K+G V +P ++ YTS++ + + + K+ E++ M
Sbjct: 440 LCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML----HAYNASEKWGKACELFLEME 495
Query: 375 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 434
N I P++I C+ ++R + GQ L++ E+ I + EI K
Sbjct: 496 ANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWK 555
Query: 435 MALELMPRMLKRNVLP----GVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKT 490
A++L+ M LP G+ N ++ F K E + +LF +++ +G+ N KT
Sbjct: 556 RAIDLIQMM--DPYLPSLSIGLTN--QMLHLFGK-SGKVEAMMKLFYKIIASGVGINLKT 610
Query: 491 YTTLI 495
Y L+
Sbjct: 611 YAILL 615
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 171/381 (44%), Gaps = 11/381 (2%)
Query: 240 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 299
TY IR + G D A L ++ + LN +N ++ + V++A++V M
Sbjct: 272 TYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRM 331
Query: 300 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 359
+ P+ Y+Y++LLN +G + + I +Y L +KL
Sbjct: 332 VETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQ-GIYSYLVRTL---SKLGH 387
Query: 360 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 419
++ ++ M ++ +L C G+ EA+ +L HE+G+ +
Sbjct: 388 ---VSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMM 444
Query: 420 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRL 479
YN + + K +L +M K P + Y+ LI+ F + E + +F L
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAIN-IFEEL 503
Query: 480 VKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREM 539
++ + +Y +LI+ G+ +A+ RF EM + L PD V+Y+ L+ F +
Sbjct: 504 ERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERV 563
Query: 540 NVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTV- 598
+A +LF+EM GC PN+ TY L+D K A L+ +MK++G+ PD +TYTV
Sbjct: 564 EMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Query: 599 --LIAWYHKHGRIGEKNKLFG 617
L + H RI KN + G
Sbjct: 624 ERLQSVSHGKSRIRRKNPITG 644
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 176/392 (44%), Gaps = 42/392 (10%)
Query: 269 HPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXX 328
H L+ +N ++ + +A +V E+MK D Y+Y +++ + G
Sbjct: 234 HKLDIFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAV 290
Query: 329 XXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTI---- 383
+ ++V Y +L+ +L K K+ DK+++V++ M++ RPN
Sbjct: 291 GLFNEMITEGLTLNVVGYNTLMQVLAKGKM-----VDKAIQVFSRMVETGCRPNEYTYSL 345
Query: 384 ----------------------------ICNHILRVHCREGQFREALTLLEDFHEQGINL 415
I ++++R + G EA L D +
Sbjct: 346 LLNLLVAEGQLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKG 405
Query: 416 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 475
+ SY ++ +C A+E++ ++ ++ V+ + Y+T+ S K + + L
Sbjct: 406 ERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLK-QISHIHDL 464
Query: 476 FTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCN 535
F ++ K G + + TY LI+ GR + +A F E+ +S PD +SY +LI
Sbjct: 465 FEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGK 524
Query: 536 IREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVT 595
+++ A F+EM G P++ TY+ L++ F K + +++A LF+EM KG P++VT
Sbjct: 525 NGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVT 584
Query: 596 YTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
Y +L+ K+GR E L+ +MK + D
Sbjct: 585 YNILLDCLEKNGRTAEAVDLYSKMKQQGLTPD 616
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 164/379 (43%), Gaps = 22/379 (5%)
Query: 139 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 198
+ ++I+ + A +F GL L++ N L++ L +
Sbjct: 272 TYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRM 331
Query: 199 METGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGG----NPTVVTYGTY---IRGLCEC 251
+ETG PN +TY+++++ L AE G++ R G + +T G Y +R L +
Sbjct: 332 VETGCRPNEYTYSLLLNL----LVAE--GQLVRLDGVVEISKRYMTQGIYSYLVRTLSKL 385
Query: 252 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 311
G+V AH+L + + +++ C G EA+E+L ++ D Y
Sbjct: 386 GHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMY 445
Query: 312 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYN 371
N + +A K + P I Y IL+ G+ D+++ ++
Sbjct: 446 NTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYN--ILIASFGRVGE--VDEAINIFE 501
Query: 372 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 431
+ ++ +P+ I N ++ + G EA ++ E+G+N + +Y+ ++ K
Sbjct: 502 ELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTE 561
Query: 432 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
+MA L ML + P +V Y+ L+ K E V+ L++++ + G+T ++ TY
Sbjct: 562 RVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVD-LYSKMKQQGLTPDSITY 620
Query: 492 TTLISI----HGRTRKRHK 506
T L + HG++R R K
Sbjct: 621 TVLERLQSVSHGKSRIRRK 639
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 90/228 (39%), Gaps = 13/228 (5%)
Query: 96 TFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHH-----SVLVFNVLIKVFASN 150
+F + G ++L + G K ++ E S + H +++N +
Sbjct: 400 SFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKI----HEKGVVTDTMMYNTVFSALGKL 455
Query: 151 SMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTY 210
+ H H +F K G I + N L+ L + P+I +Y
Sbjct: 456 KQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISY 515
Query: 211 TIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHC 266
+++C GD+ A ++ G NP VVTY T + + V++A+ L ++
Sbjct: 516 NSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLV 575
Query: 267 KLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 314
K N +N ++ + G EA+++ +MK PD +Y +L
Sbjct: 576 KGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 22/186 (11%)
Query: 450 PGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYC 509
P + N LI + F+ V + +VK+ + N T LI G T
Sbjct: 133 PFLYNRIILILSRSNLPDRFDRVRSILDSMVKSNVHGNISTVNILIGFFGNT-------- 184
Query: 510 RFGEMIQSC--------LCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTY 561
E +Q C L + +Y L+ + R+ + A ++ E+ R G +++ Y
Sbjct: 185 ---EDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAY 241
Query: 562 TCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 621
L+D K + A Q+F++MK++ D TYT++I + G+ E LF EM
Sbjct: 242 NMLLDALAKDEK---ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMIT 298
Query: 622 NCILLD 627
+ L+
Sbjct: 299 EGLTLN 304
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 171/377 (45%), Gaps = 8/377 (2%)
Query: 224 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 283
E+L + G P +V + +I LC+ G++ A ++ KL +S ++VI GF
Sbjct: 292 ELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGF 351
Query: 284 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 343
C+ G EA++++ S R P+++ Y+ L+ C GD+ + P
Sbjct: 352 CKVGKPEEAIKLIH---SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDC 408
Query: 344 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 403
V YT++I + DK+ + + ++L++ P+ ++ R G +A +
Sbjct: 409 VCYTTMI----DGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAES 464
Query: 404 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 463
+ + +G+ L+ +YN ++H K EL+ M + P V Y+ LI
Sbjct: 465 VFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMV 524
Query: 464 KEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDE 523
+ + + + L++ G +T +T +I + +A+ + M + PD
Sbjct: 525 V-RGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDV 583
Query: 524 VSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE 583
V+ +AL+ +C + M A LF ++ G P++ Y LI G+C + I+ A +L
Sbjct: 584 VTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGL 643
Query: 584 MKRKGIFPDVVTYTVLI 600
M ++G+ P+ T+ L+
Sbjct: 644 MVQRGMLPNESTHHALV 660
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 168/370 (45%), Gaps = 12/370 (3%)
Query: 202 GPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 257
G P+I +T+ + G ++ A +L K+ G + V+ + I G C+ G + A
Sbjct: 301 GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEA 360
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
KL+ +L P N +++ + C G + A + +E+ PD Y +++
Sbjct: 361 IKLIHSF--RLRP-NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDG 417
Query: 318 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 377
+C G PS+ T LI C + + D V+ +M
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACS---RFGSISDAE-SVFRNMKTEG 473
Query: 378 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 437
++ + + N+++ + + Q + L+++ GI+ + +YN +IH + Y A
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEAN 533
Query: 438 ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISI 497
E++ +++R +P + ++ +I GF+K + +F+ L+ + + + T + L+
Sbjct: 534 EIISELIRRGFVPSTLAFTDVIGGFSK-RGDFQEAFILWFYMADLRMKPDVVTCSALLHG 592
Query: 498 HGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPN 557
+ + ++ KA F +++ + L PD V Y LI +C++ ++ AC L M + G LPN
Sbjct: 593 YCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPN 652
Query: 558 LYTYTCLIDG 567
T+ L+ G
Sbjct: 653 ESTHHALVLG 662
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 126/273 (46%), Gaps = 8/273 (2%)
Query: 198 LMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
+ E G LP+ YT M+ + G A + G + +SG P++ T I G
Sbjct: 399 IFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGS 458
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
+ A + R + + L+ +N ++HG+ + +N+ E+++EM+S+ PDV +YN+
Sbjct: 459 ISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNI 518
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
L+++ +G + PS + +T +I + + ++ ++ M
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVI----GGFSKRGDFQEAFILWFYM 574
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
++P+ + C+ +L +C+ + +A+ L + G+ + YN +IH C
Sbjct: 575 ADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDI 634
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ 466
+ A EL+ M++R +LP + L+ G ++
Sbjct: 635 EKACELIGLMVQRGMLPNESTHHALVLGLEGKR 667
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 4/257 (1%)
Query: 363 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 422
+DK E+ M IRP+ + + C+ G +EA ++L GI+ + S +
Sbjct: 287 FDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSS 346
Query: 423 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKA 482
+I CK P+ A++L+ R P + YS+ +S + +F + +
Sbjct: 347 VIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNIC-STGDMLRASTIFQEIFEL 402
Query: 483 GITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVA 542
G+ + YTT+I + + KA+ FG +++S P + T LI ++ A
Sbjct: 403 GLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDA 462
Query: 543 CALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAW 602
++F+ M G ++ TY L+ G+ K ++ +L DEM+ GI PDV TY +LI
Sbjct: 463 ESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHS 522
Query: 603 YHKHGRIGEKNKLFGEM 619
G I E N++ E+
Sbjct: 523 MVVRGYIDEANEIISEL 539
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 24/263 (9%)
Query: 375 QNAIRPNTIIC----NHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 430
Q I P+ +C ILRVH E A +E +G +LN + I C +
Sbjct: 229 QFGIFPSRGVCISLLKEILRVHGLE----LAREFVEHMLSRGRHLNAAVLSLFIRKYCSD 284
Query: 431 SYPKMALELMPRMLKRNVLPGVVNYSTLI-----SGFAKEQSNFEMVERLFTRLVKAGIT 485
Y EL+ M + P +V ++ I +GF KE ++ +LF GI+
Sbjct: 285 GYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLF------GIS 338
Query: 486 FNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSC-LCPDEVSYTALIAVFCNIREMNVACA 544
++ + +++I + K +A ++I S L P+ Y++ ++ C+ +M A
Sbjct: 339 QDSVSVSSVIDGFCKVGKPEEAI----KLIHSFRLRPNIFVYSSFLSNICSTGDMLRAST 394
Query: 545 LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYH 604
+FQE+ +G LP+ YT +IDG+C + D A Q F + + G P + T T+LI
Sbjct: 395 IFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACS 454
Query: 605 KHGRIGEKNKLFGEMKANCILLD 627
+ G I + +F MK + LD
Sbjct: 455 RFGSISDAESVFRNMKTEGLKLD 477
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 163/409 (39%), Gaps = 53/409 (12%)
Query: 210 YTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH 265
++I++ C + +A ++ K+ + G P+ + ++ + +++A + V +
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHML 263
Query: 266 CKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVX 325
+ LN+ + I +C G ++ E+L MK PD+ ++ + ++ C
Sbjct: 264 SRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLC------ 317
Query: 326 XXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIIC 385
K + + +L K KL G I +++
Sbjct: 318 --------------KAGFLKEATSVLF-KLKLFG------------------ISQDSVSV 344
Query: 386 NHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLK 445
+ ++ C+ G+ EA+ L+ F + N + Y+ + IC A + + +
Sbjct: 345 SSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFE 401
Query: 446 RNVLPGVVNYSTLISGF---AKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTR 502
+LP V Y+T+I G+ + F+ F L+K+G + T T LI R
Sbjct: 402 LGLLPDCVCYTTMIDGYCNLGRTDKAFQY----FGALLKSGNPPSLTTSTILIGACSRFG 457
Query: 503 KRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYT 562
A F M L D V+Y L+ + ++N L EM G P++ TY
Sbjct: 458 SISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYN 517
Query: 563 CLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
LI YID A ++ E+ R+G P + +T +I + K G E
Sbjct: 518 ILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQE 566
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 117/260 (45%), Gaps = 4/260 (1%)
Query: 368 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
E ML N + + +R +C +G F + LL GI + ++ I +
Sbjct: 257 EFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKL 316
Query: 428 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFN 487
CK + K A ++ ++ + V+ S++I GF K E ++ + + ++ N
Sbjct: 317 CKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRP----N 372
Query: 488 TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQ 547
Y++ +S T +A F E+ + L PD V YT +I +CN+ + A F
Sbjct: 373 IFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFG 432
Query: 548 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 607
+ + G P+L T T LI + I A +F MK +G+ DVVTY L+ Y K
Sbjct: 433 ALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTH 492
Query: 608 RIGEKNKLFGEMKANCILLD 627
++ + +L EM++ I D
Sbjct: 493 QLNKVFELIDEMRSAGISPD 512
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 171/377 (45%), Gaps = 8/377 (2%)
Query: 224 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 283
E+L + G P +V + +I LC+ G++ A ++ KL +S ++VI GF
Sbjct: 292 ELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGF 351
Query: 284 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 343
C+ G EA++++ S R P+++ Y+ L+ C GD+ + P
Sbjct: 352 CKVGKPEEAIKLIH---SFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDC 408
Query: 344 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 403
V YT++I + DK+ + + ++L++ P+ ++ R G +A +
Sbjct: 409 VCYTTMI----DGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAES 464
Query: 404 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 463
+ + +G+ L+ +YN ++H K EL+ M + P V Y+ LI
Sbjct: 465 VFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMV 524
Query: 464 KEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDE 523
+ + + + L++ G +T +T +I + +A+ + M + PD
Sbjct: 525 V-RGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDV 583
Query: 524 VSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE 583
V+ +AL+ +C + M A LF ++ G P++ Y LI G+C + I+ A +L
Sbjct: 584 VTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGL 643
Query: 584 MKRKGIFPDVVTYTVLI 600
M ++G+ P+ T+ L+
Sbjct: 644 MVQRGMLPNESTHHALV 660
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 168/370 (45%), Gaps = 12/370 (3%)
Query: 202 GPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 257
G P+I +T+ + G ++ A +L K+ G + V+ + I G C+ G + A
Sbjct: 301 GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEA 360
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
KL+ +L P N +++ + C G + A + +E+ PD Y +++
Sbjct: 361 IKLIHSF--RLRP-NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDG 417
Query: 318 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 377
+C G PS+ T LI C + + D V+ +M
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACS---RFGSISDAE-SVFRNMKTEG 473
Query: 378 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 437
++ + + N+++ + + Q + L+++ GI+ + +YN +IH + Y A
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEAN 533
Query: 438 ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISI 497
E++ +++R +P + ++ +I GF+K + +F+ L+ + + + T + L+
Sbjct: 534 EIISELIRRGFVPSTLAFTDVIGGFSK-RGDFQEAFILWFYMADLRMKPDVVTCSALLHG 592
Query: 498 HGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPN 557
+ + ++ KA F +++ + L PD V Y LI +C++ ++ AC L M + G LPN
Sbjct: 593 YCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPN 652
Query: 558 LYTYTCLIDG 567
T+ L+ G
Sbjct: 653 ESTHHALVLG 662
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 126/273 (46%), Gaps = 8/273 (2%)
Query: 198 LMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
+ E G LP+ YT M+ + G A + G + +SG P++ T I G
Sbjct: 399 IFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGS 458
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
+ A + R + + L+ +N ++HG+ + +N+ E+++EM+S+ PDV +YN+
Sbjct: 459 ISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNI 518
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
L+++ +G + PS + +T +I + + ++ ++ M
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVI----GGFSKRGDFQEAFILWFYM 574
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
++P+ + C+ +L +C+ + +A+ L + G+ + YN +IH C
Sbjct: 575 ADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDI 634
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ 466
+ A EL+ M++R +LP + L+ G ++
Sbjct: 635 EKACELIGLMVQRGMLPNESTHHALVLGLEGKR 667
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 4/257 (1%)
Query: 363 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 422
+DK E+ M IRP+ + + C+ G +EA ++L GI+ + S +
Sbjct: 287 FDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSS 346
Query: 423 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKA 482
+I CK P+ A++L+ R P + YS+ +S + +F + +
Sbjct: 347 VIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNIC-STGDMLRASTIFQEIFEL 402
Query: 483 GITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVA 542
G+ + YTT+I + + KA+ FG +++S P + T LI ++ A
Sbjct: 403 GLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDA 462
Query: 543 CALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAW 602
++F+ M G ++ TY L+ G+ K ++ +L DEM+ GI PDV TY +LI
Sbjct: 463 ESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHS 522
Query: 603 YHKHGRIGEKNKLFGEM 619
G I E N++ E+
Sbjct: 523 MVVRGYIDEANEIISEL 539
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 24/263 (9%)
Query: 375 QNAIRPNTIIC----NHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 430
Q I P+ +C ILRVH E A +E +G +LN + I C +
Sbjct: 229 QFGIFPSRGVCISLLKEILRVHGLE----LAREFVEHMLSRGRHLNAAVLSLFIRKYCSD 284
Query: 431 SYPKMALELMPRMLKRNVLPGVVNYSTLI-----SGFAKEQSNFEMVERLFTRLVKAGIT 485
Y EL+ M + P +V ++ I +GF KE ++ +LF GI+
Sbjct: 285 GYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLF------GIS 338
Query: 486 FNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSC-LCPDEVSYTALIAVFCNIREMNVACA 544
++ + +++I + K +A ++I S L P+ Y++ ++ C+ +M A
Sbjct: 339 QDSVSVSSVIDGFCKVGKPEEAI----KLIHSFRLRPNIFVYSSFLSNICSTGDMLRAST 394
Query: 545 LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYH 604
+FQE+ +G LP+ YT +IDG+C + D A Q F + + G P + T T+LI
Sbjct: 395 IFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACS 454
Query: 605 KHGRIGEKNKLFGEMKANCILLD 627
+ G I + +F MK + LD
Sbjct: 455 RFGSISDAESVFRNMKTEGLKLD 477
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/409 (21%), Positives = 163/409 (39%), Gaps = 53/409 (12%)
Query: 210 YTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH 265
++I++ C + +A ++ K+ + G P+ + ++ + +++A + V +
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHML 263
Query: 266 CKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVX 325
+ LN+ + I +C G ++ E+L MK PD+ ++ + ++ C
Sbjct: 264 SRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLC------ 317
Query: 326 XXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIIC 385
K + + +L K KL G I +++
Sbjct: 318 --------------KAGFLKEATSVLF-KLKLFG------------------ISQDSVSV 344
Query: 386 NHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLK 445
+ ++ C+ G+ EA+ L+ F + N + Y+ + IC A + + +
Sbjct: 345 SSVIDGFCKVGKPEEAIKLIHSFR---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFE 401
Query: 446 RNVLPGVVNYSTLISGF---AKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTR 502
+LP V Y+T+I G+ + F+ F L+K+G + T T LI R
Sbjct: 402 LGLLPDCVCYTTMIDGYCNLGRTDKAFQY----FGALLKSGNPPSLTTSTILIGACSRFG 457
Query: 503 KRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYT 562
A F M L D V+Y L+ + ++N L EM G P++ TY
Sbjct: 458 SISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYN 517
Query: 563 CLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
LI YID A ++ E+ R+G P + +T +I + K G E
Sbjct: 518 ILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQE 566
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 117/260 (45%), Gaps = 4/260 (1%)
Query: 368 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
E ML N + + +R +C +G F + LL GI + ++ I +
Sbjct: 257 EFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKL 316
Query: 428 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFN 487
CK + K A ++ ++ + V+ S++I GF K E ++ + + ++ N
Sbjct: 317 CKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRP----N 372
Query: 488 TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQ 547
Y++ +S T +A F E+ + L PD V YT +I +CN+ + A F
Sbjct: 373 IFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFG 432
Query: 548 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 607
+ + G P+L T T LI + I A +F MK +G+ DVVTY L+ Y K
Sbjct: 433 ALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTH 492
Query: 608 RIGEKNKLFGEMKANCILLD 627
++ + +L EM++ I D
Sbjct: 493 QLNKVFELIDEMRSAGISPD 512
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 165/340 (48%), Gaps = 7/340 (2%)
Query: 277 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 336
+++++GFC ++ +A+ V +M+ DV +L++ CK V
Sbjct: 17 SSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKD 76
Query: 337 CQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
I P++V Y+SLI LCK+ +L D ++ M I PN I + ++ + +
Sbjct: 77 RGISPNVVTYSSLITGLCKS----GRLADAERRLH-EMDSKKINPNVITFSALIDAYAKR 131
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
G+ + ++ + + I+ N ++Y+ +I+ +C + A++++ M+ + P VV Y
Sbjct: 132 GKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTY 191
Query: 456 STLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMI 515
STL +GF K S + +L + + G+ NT + TLI + + K A FG M
Sbjct: 192 STLANGFFK-SSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMT 250
Query: 516 QSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 575
+ L P+ SY ++A E+ A + F+ M + ++ TYT +I G CK +
Sbjct: 251 SNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVK 310
Query: 576 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL 615
A LF ++K K + PD YT++IA ++ G E + L
Sbjct: 311 EAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 350
Score = 115 bits (289), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 120/253 (47%), Gaps = 1/253 (0%)
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
M++ I P+ + + ++ C ++A+ + + GI + +I +CK
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
ALE++ RM R + P VV YS+LI+G K ER + I N T++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCK-SGRLADAERRLHEMDSKKINPNVITFS 122
Query: 493 TLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI 552
LI + + K K + MIQ + P+ +Y++LI C ++ A + M
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 553 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 612
GC PN+ TY+ L +GF K +D +L D+M ++G+ + V+ LI Y + G+I
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 613 NKLFGEMKANCIL 625
+FG M +N ++
Sbjct: 243 LGVFGYMTSNGLI 255
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 140/316 (44%), Gaps = 7/316 (2%)
Query: 306 PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYD 364
PD+ + + L+N FC + IK +V T LI LCKN+L
Sbjct: 11 PDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL-----VV 65
Query: 365 KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEII 424
+LEV M I PN + + ++ C+ G+ +A L + + IN N +++ +I
Sbjct: 66 PALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALI 125
Query: 425 HMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGI 484
K + M++ ++ P V YS+LI G E + ++ ++ G
Sbjct: 126 DAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAI-KMLDLMISKGC 184
Query: 485 TFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACA 544
T N TY+TL + ++ + +M Q + + VS LI + ++++A
Sbjct: 185 TPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALG 244
Query: 545 LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYH 604
+F M+ G +PN+ +Y ++ G ++ A F+ M++ D++TYT++I
Sbjct: 245 VFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMC 304
Query: 605 KHGRIGEKNKLFGEMK 620
K + E LF ++K
Sbjct: 305 KACMVKEAYDLFYKLK 320
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 162/345 (46%), Gaps = 23/345 (6%)
Query: 198 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
+M+ G P+I T + +++ I+ A + G++ + G VV I LC+
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
V A ++++++ + N ++++I G C+ G + +A L EM S + P+V +++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNS 372
L++A+ K+G + I P++ Y+SLI LC D+++++ +
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCM-----HNRVDEAIKMLDL 178
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
M+ PN + + + + + + + LL+D ++G+ N S N +I +
Sbjct: 179 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 238
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISG-FAKEQSNFEMVERLFTR---LVKAGITFNT 488
+AL + M ++P + +Y+ +++G FA + VE+ +R + K +
Sbjct: 239 IDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGE-----VEKALSRFEHMQKTRNDLDI 293
Query: 489 KTYTTLISIHGRTRK--RHKAYCRFGEMIQSCLCPDEVSYTALIA 531
TYT I IHG + +AY F ++ + PD +YT +IA
Sbjct: 294 ITYT--IMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIA 336
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 138/309 (44%), Gaps = 11/309 (3%)
Query: 222 AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIH 281
A E+L ++ G +P VVTY + I GLC+ G + A + + ++ K N F+A+I
Sbjct: 67 ALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALID 126
Query: 282 GFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKP 341
+ +RG +++ V + M P+V++Y+ L+ C V P
Sbjct: 127 AYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTP 186
Query: 342 SIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREA 401
++V Y++L N D +++ + M Q + NT+ CN +++ + + G+ A
Sbjct: 187 NVVTYSTL----ANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 402 LTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLK-RNVLPGVVNYSTLIS 460
L + G+ N SYN ++ + + AL M K RN L ++ Y+ +I
Sbjct: 243 LGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLD-IITYTIMIH 301
Query: 461 GFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRT--RKRHKAYCRFGE--MIQ 516
G K E + LF +L + + K YT +I+ R R A RF + + Q
Sbjct: 302 GMCKACMVKEAYD-LFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADALNRFYQKHVRQ 360
Query: 517 SCLCPDEVS 525
+ P EVS
Sbjct: 361 NESAPAEVS 369
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 101/214 (47%), Gaps = 34/214 (15%)
Query: 440 MPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV------ERL------------------ 475
M +M+K + P +V S+L++GF S + V E++
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCK 60
Query: 476 ----------FTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVS 525
R+ GI+ N TY++LI+ ++ + A R EM + P+ ++
Sbjct: 61 NRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVIT 120
Query: 526 YTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 585
++ALI + +++ ++++ M ++ PN++TY+ LI G C + +D A ++ D M
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 586 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
KG P+VVTY+ L + K R+ + KL +M
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDM 214
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 59/112 (52%)
Query: 513 EMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 572
+M++ + PD V+ ++L+ FC + A + +M ++G ++ T LID CK
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 573 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 624
+ A ++ MK +GI P+VVTY+ LI K GR+ + + EM + I
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKI 114
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/405 (22%), Positives = 168/405 (41%), Gaps = 42/405 (10%)
Query: 215 SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSH 274
S G + A +++ + R P + +RGL +D A ++R + ++
Sbjct: 116 SNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTI 175
Query: 275 CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 334
+N +I C++G + AL +LE+M S + PDV +YN ++ G+
Sbjct: 176 TYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQ 235
Query: 335 XXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 393
P ++ YT L+ L+C+ +++EV M P+ + N ++ +C
Sbjct: 236 LQNGCPPFMITYTVLVELVCRYCGSA-----RAIEVLEDMAVEGCYPDIVTYNSLVNYNC 290
Query: 394 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 453
R G E ++++ G+ LN +YN ++H +C Y E++ M + + P V+
Sbjct: 291 RRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVI 350
Query: 454 NYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE 513
Y+ LI+G K RL+ I F F +
Sbjct: 351 TYNILINGLCK------------ARLLSRAIDF------------------------FYQ 374
Query: 514 MIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 573
M++ PD V+Y ++ ++ A L + C P L TY +IDG K
Sbjct: 375 MLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGL 434
Query: 574 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE 618
+ A +L+ +M GIFPD +T LI + + + E ++ E
Sbjct: 435 MKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKE 479
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 120/516 (23%), Positives = 211/516 (40%), Gaps = 18/516 (3%)
Query: 59 RVIKSLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMH-LEVFALLRDIVGYC 117
R SL+WK K + HG SV + H + H V LR V
Sbjct: 29 RKFSSLDWKQEIGLKKDVFFRCHGLLSSVCIDNVNDHAERSSEFHHYGVGTNLRARV--- 85
Query: 118 KCDDSFEQFSTLLDLP--HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSC 175
+QF D P + N ++ SN L A ++ H SC
Sbjct: 86 ---KPMKQFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSC 142
Query: 176 NFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--C--GDIRLAAEILGKIYR 231
+ L++ L ++ +G +P+ TY +++ C G IR A +L +
Sbjct: 143 SNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSL 202
Query: 232 SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 291
SG P V+TY T IR + + G + A + + P + ++ C+
Sbjct: 203 SGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSAR 262
Query: 292 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL 351
A+EVLE+M +PD+ +YN L+N C++G++ ++ + V Y +L+
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLL- 321
Query: 352 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 411
+ L + +D+ E+ N M Q + P I N ++ C+ A+ EQ
Sbjct: 322 ---HSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQ 378
Query: 412 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEM 471
+ +YN ++ + KE A+EL+ + PG++ Y+++I G AK+ +
Sbjct: 379 KCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKA 438
Query: 472 VERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIA 531
+E L+ +++ AGI + T +LI R +A E +Y +I
Sbjct: 439 LE-LYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQ 497
Query: 532 VFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDG 567
C +E+ +A + + M GC P+ YT ++ G
Sbjct: 498 GLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKG 533
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/395 (23%), Positives = 165/395 (41%), Gaps = 52/395 (13%)
Query: 240 TYGTYIRGLCECGYVDVAHKLVRKL--HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 297
T + LC G + A KLV + H ++ P C N ++ G + +++A+ +L
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQV-PHFPSCSN-LVRGLARIDQLDKAMCILR 163
Query: 298 EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKL 357
M S PD +YNM++ CKKG + T+L+LL L
Sbjct: 164 VMVMSGGVPDTITYNMIIGNLCKKGHIR---------------------TALVLLEDMSL 202
Query: 358 KGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQ 417
G P+ I N ++R G +A+ +D + G
Sbjct: 203 SGSP------------------PDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFM 244
Query: 418 YSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFT 477
+Y ++ ++C+ A+E++ M P +V Y++L++ + + N E V +
Sbjct: 245 ITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVN-YNCRRGNLEEVASVIQ 303
Query: 478 RLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE----MIQSCLCPDEVSYTALIAVF 533
++ G+ NT TY TL+ + H+ + E M Q+ CP ++Y LI
Sbjct: 304 HILSHGLELNTVTYNTLL----HSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGL 359
Query: 534 CNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 593
C R ++ A F +M CLP++ TY ++ K +D A +L +K P +
Sbjct: 360 CKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGL 419
Query: 594 VTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 628
+TY +I K G + + +L+ +M I DD
Sbjct: 420 ITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDD 454
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 125/275 (45%), Gaps = 8/275 (2%)
Query: 202 GPLPNIHTYTIMMS--C--GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 257
G P+I TY +++ C G++ A ++ I G VTY T + LC Y D
Sbjct: 274 GCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEV 333
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
+++ ++ + +N +I+G C+ ++ A++ +M + PD+ +YN +L A
Sbjct: 334 EEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGA 393
Query: 318 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 377
K+G V P ++ Y S+I + L + L K+LE+Y+ ML
Sbjct: 394 MSKEGMVDDAIELLGLLKNTCCPPGLITYNSVI----DGLAKKGLMKKALELYHQMLDAG 449
Query: 378 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 437
I P+ I ++ CR EA +L++ +G + +Y +I +CK+ +MA+
Sbjct: 450 IFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAI 509
Query: 438 ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV 472
E++ ML P Y+ ++ G + E V
Sbjct: 510 EVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/541 (21%), Positives = 229/541 (42%), Gaps = 75/541 (13%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
V V L+ ++A + A +VF S + E ++ + + ++
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMR----ERNLFTWSAMIGAYSRENRWREVAKLF 169
Query: 196 XXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
+M+ G LP+ + ++ +CGD+ I + + G + + + + +C
Sbjct: 170 RLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKC 229
Query: 252 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 311
G +D A K R++ + + +N+V+ +CQ G EA+E+++EM+ P + ++
Sbjct: 230 GELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW 285
Query: 312 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVY 370
N+L+ + + G I + +T++I L N ++ Q +L+++
Sbjct: 286 NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQ-----ALDMF 340
Query: 371 NSMLQNAIRPNTI-----------------------------------ICNHILRVHCRE 395
M + PN + + N ++ ++ +
Sbjct: 341 RKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKC 400
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
G+ +A + + N + Y++N +I C+ Y A EL RM N+ P ++ +
Sbjct: 401 GKLEDARKVFDSVK----NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITW 456
Query: 456 STLISGFAKEQSNFEMVERLFTRLVKAG-ITFNTKTYTTLISIHGRTRKRHKAYCRFGEM 514
+T+ISG+ K E ++ LF R+ K G + NT T+ +I+ + + K+ +A F +M
Sbjct: 457 NTMISGYIKNGDEGEAMD-LFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKM 515
Query: 515 IQSCLCPDEVSYTALIAVFCN------IREMNVACALFQEMSRIGCLPNLYTYTCLIDGF 568
S P+ V+ +L+ N +RE++ C L + + I + N L D +
Sbjct: 516 QFSRFMPNSVTILSLLPACANLLGAKMVREIH-GCVLRRNLDAIHAVKN-----ALTDTY 569
Query: 569 CKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 628
K I+ + +F M+ K D++T+ LI Y HG G LF +MK I +
Sbjct: 570 AKSGDIEYSRTIFLGMETK----DIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNR 625
Query: 629 G 629
G
Sbjct: 626 G 626
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 106/222 (47%), Gaps = 9/222 (4%)
Query: 380 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 439
P+ + +L ++ + G +A + + E+ N ++++ +I +E+ + +L
Sbjct: 113 PDVFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIGAYSRENRWREVAKL 168
Query: 440 MPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHG 499
M+K VLP + ++ G A + E + + + ++K G++ + ++++++
Sbjct: 169 FRLMMKDGVLPDDFLFPKILQGCAN-CGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYA 227
Query: 500 RTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLY 559
+ + A F M + D +++ +++ +C + A L +EM + G P L
Sbjct: 228 KCGELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLV 283
Query: 560 TYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 601
T+ LI G+ ++ D A L +M+ GI DV T+T +I+
Sbjct: 284 TWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMIS 325
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 129/304 (42%), Gaps = 47/304 (15%)
Query: 340 KPSIVNYTSLILLCKNK--LKGQQLYDKSLE--------VYNSMLQNAIRPNTIICNHIL 389
+P+I+ LC+N L+ ++ D + Y +L++ I +I IL
Sbjct: 44 EPNIIPDEQFDYLCRNGSLLEAEKALDSLFQQGSKVKRSTYLKLLESCIDSGSIHLGRIL 103
Query: 390 RVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL 449
H R G F E +E +++ M K A ++ M +RN+
Sbjct: 104 --HARFGLFTEPDVFVE--------------TKLLSMYAKCGCIADARKVFDSMRERNLF 147
Query: 450 PGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGR------TRK 503
+S +I +++E + + V +LF ++K G+ + + ++ +
Sbjct: 148 ----TWSAMIGAYSRE-NRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKV 202
Query: 504 RHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTC 563
H + G + SCL VS +++AV+ E++ A F+ M ++ +
Sbjct: 203 IHSVVIKLG--MSSCL---RVS-NSILAVYAKCGELDFATKFFRRMRE----RDVIAWNS 252
Query: 564 LIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANC 623
++ +C+ + A +L EM+++GI P +VT+ +LI Y++ G+ L +M+
Sbjct: 253 VLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFG 312
Query: 624 ILLD 627
I D
Sbjct: 313 ITAD 316
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 160/386 (41%), Gaps = 81/386 (20%)
Query: 237 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL 296
TV +Y ++ ECG +LV ++ P + FN +I C G A + +
Sbjct: 148 TVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLI---CSCGEAGLAKQAV 204
Query: 297 EEMKSSRTF---PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLC 353
+ S+TF P +SYN +LN+
Sbjct: 205 VQFMKSKTFNYRPFKHSYNAILNS------------------------------------ 228
Query: 354 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 413
L G + Y VY ML++ P+ + N +L + R G+ L ++ G
Sbjct: 229 ---LLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGF 285
Query: 414 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 473
+ + Y+YN ++H++ K + P AL + M + + P V++Y+TLI G ++ N E +
Sbjct: 286 SPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSR-AGNLEACK 344
Query: 474 RLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVF 533
+VKAG CR PD V YT +I +
Sbjct: 345 YFLDEMVKAG-------------------------CR----------PDVVCYTVMITGY 369
Query: 534 CNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 593
E++ A +F+EM+ G LPN++TY +I G C A L EM+ +G P+
Sbjct: 370 VVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNF 429
Query: 594 VTYTVLIAWYHKHGRIGEKNKLFGEM 619
V Y+ L+++ K G++ E K+ EM
Sbjct: 430 VVYSTLVSYLRKAGKLSEARKVIREM 455
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 111/260 (42%), Gaps = 3/260 (1%)
Query: 363 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE-GQFREALTLLEDFHEQGINLNQYSYN 421
Y + + M+Q+ P T ++L C E G ++A+ ++SYN
Sbjct: 165 YKAMWRLVDEMVQDGF-PTTARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYN 223
Query: 422 EIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVK 481
I++ + K+ + +ML+ P V+ Y+ L+ + + +RLF + +
Sbjct: 224 AILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYR-LGKMDRFDRLFDEMAR 282
Query: 482 AGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNV 541
G + ++ TY L+ I G+ K A M + + P + YT LI +
Sbjct: 283 DGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEA 342
Query: 542 ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 601
EM + GC P++ YT +I G+ +D A ++F EM KG P+V TY +I
Sbjct: 343 CKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 402
Query: 602 WYHKHGRIGEKNKLFGEMKA 621
G E L EM++
Sbjct: 403 GLCMAGEFREACWLLKEMES 422
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 80/191 (41%), Gaps = 4/191 (2%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
VL +N+L+ ++ ++F G + N LL L
Sbjct: 253 DVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTL 312
Query: 196 XXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
+ E G P++ YT ++ G++ L ++ ++G P VV Y I G
Sbjct: 313 NHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVS 372
Query: 252 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 311
G +D A ++ R++ K N +N++I G C G EA +L+EM+S P+ Y
Sbjct: 373 GELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVY 432
Query: 312 NMLLNAFCKKG 322
+ L++ K G
Sbjct: 433 STLVSYLRKAG 443
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 116/465 (24%), Positives = 190/465 (40%), Gaps = 85/465 (18%)
Query: 216 CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHC 275
G +R A ++L + R+G P ++ T I ++ A + + ++ N
Sbjct: 255 AGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVT 314
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
+N +I G+C V EA+E+LE+M S PD SY ++ CK+
Sbjct: 315 YNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKE-------------- 360
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
IV L+ K + + ++ + + NT+I H+L H
Sbjct: 361 -----KRIVEVRDLM--------------KKMAKEHGLVPDQVTYNTLI--HMLTKH--- 396
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRML-KRNVLPGVVN 454
EAL L+D E+G +++ Y+ I+H +CKE A +L+ ML K + P VV
Sbjct: 397 DHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVT 456
Query: 455 YSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKA------- 507
Y+ +++GF + + ++L + G NT +YT L++ RT K +A
Sbjct: 457 YTAVVNGFCR-LGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMS 515
Query: 508 ------------------YCRFGEMIQSC----------LCPDEVSYTALIAVFCNIREM 539
R G++ ++C P V L+ C
Sbjct: 516 EEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRT 575
Query: 540 NVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 599
+ A +E GC N+ +T +I GFC+ D +D A + D+M DV TYT L
Sbjct: 576 HEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTL 635
Query: 600 IAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKLQDPKLVQFKNV 644
+ K GRI E +L +M L GI DP V ++ V
Sbjct: 636 VDTLGKKGRIAEATELMKKM------LHKGI----DPTPVTYRTV 670
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 216/480 (45%), Gaps = 17/480 (3%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
++L+ N I VF + LE A + + VG+ ++ + N +++
Sbjct: 276 NLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELL 335
Query: 196 XXLMETGPLPNIHTYTIMMS--CGDIRLAA--EILGKIYRSGG-NPTVVTYGTYIRGLCE 250
+ G LP+ +Y +M C + R+ +++ K+ + G P VTY T I L +
Sbjct: 336 EDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTK 395
Query: 251 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKS-SRTFPDVY 309
+ D A ++ K ++ ++A++H C+ G ++EA +++ EM S PDV
Sbjct: 396 HDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVV 455
Query: 310 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLE 368
+Y ++N FC+ G+V KP+ V+YT+L+ +C+ G+ L ++ E
Sbjct: 456 TYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRT---GKSL--EARE 510
Query: 369 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 428
+ N ++ PN+I + I+ REG+ EA ++ + +G N ++ +C
Sbjct: 511 MMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLC 570
Query: 429 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNT 488
++ A + M L + VVN++T+I GF + + + + +
Sbjct: 571 RDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFC-QNDELDAALSVLDDMYLINKHADV 629
Query: 489 KTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQE 548
TYTTL+ G+ + +A +M+ + P V+Y +I +C + +++ A+ ++
Sbjct: 630 FTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEK 689
Query: 549 M-SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 607
M SR C Y +I+ C + ++ A L ++ R D T L+ Y K G
Sbjct: 690 MISRQKCRT---IYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKG 746
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 73/157 (46%)
Query: 474 RLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVF 533
R+ + + GI + ++ ++ + R + A M ++ + P+ + I VF
Sbjct: 228 RVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVF 287
Query: 534 CNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 593
+ A + M +G +PN+ TY C+I G+C + ++ A +L ++M KG PD
Sbjct: 288 VRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDK 347
Query: 594 VTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 630
V+Y ++ + K RI E L +M L+ D +
Sbjct: 348 VSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQV 384
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 177/391 (45%), Gaps = 15/391 (3%)
Query: 236 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 295
P+V Y +R + D+AH L ++ + + + ++ +I F + G + AL
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 296 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 355
L++M+ R D+ Y+ L+ + D I P +V Y S+I N
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMI----N 268
Query: 356 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 415
+L+ ++ + M + + PNT+ + +L V+ +F EAL++ + E L
Sbjct: 269 VYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCAL 328
Query: 416 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 475
+ + N +I + + K A L + K ++ P VV+Y+T++ + + + E + L
Sbjct: 329 DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIH-L 387
Query: 476 FTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCN 535
F + + I N TY T+I I+G+T + KA EM + P+ ++Y+ +I+++
Sbjct: 388 FRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGK 447
Query: 536 IREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVT 595
+++ A LFQ++ G + Y +I + ++ + A +L E+K PD +
Sbjct: 448 AGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK----LPDNIP 503
Query: 596 YTVLIAWYHKHGRIGEKNKLF------GEMK 620
I K GR E +F GE+K
Sbjct: 504 RETAITILAKAGRTEEATWVFRQAFESGEVK 534
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/536 (18%), Positives = 201/536 (37%), Gaps = 67/536 (12%)
Query: 110 LRDIVGYCKCDDSFEQFSTLLDLPHH------SVLVFNVLIKVFASNSMLEHAHQVFVSA 163
+R +V ++ +++ LLD H SV +NV+++ + AH +F
Sbjct: 122 IRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEM 181
Query: 164 KNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCG----DI 219
+ L + + L+ + + ++ Y+ ++ D
Sbjct: 182 RQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDY 241
Query: 220 RLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAV 279
A I ++ RSG P +V Y + I + A L+++++ N+ ++ +
Sbjct: 242 SKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTL 301
Query: 280 IHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQI 339
+ + + EAL V EMK D+ + N++++ + + V I
Sbjct: 302 LSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDI 361
Query: 340 KPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFR 399
+P++V+Y N ILRV+ F
Sbjct: 362 EPNVVSY---------------------------------------NTILRVYGEAELFG 382
Query: 400 EALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLI 459
EA+ L + I N +YN +I + K + A L+ M R + P + YST+I
Sbjct: 383 EAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTII 442
Query: 460 SGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEM----- 514
S + K + LF +L +G+ + Y T+I AY R G M
Sbjct: 443 SIWGK-AGKLDRAATLFQKLRSSGVEIDQVLYQTMIV----------AYERVGLMGHAKR 491
Query: 515 -IQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 573
+ PD + I + A +F++ G + ++ + C+I+ + +
Sbjct: 492 LLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQR 551
Query: 574 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN-CILLDD 628
++F++M+ G FPD +++ Y K + + ++ EM+ C+ D+
Sbjct: 552 YVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDE 607
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 109/229 (47%), Gaps = 8/229 (3%)
Query: 399 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKR-NVLPGVVNYST 457
+E +LL + ++ Q S ++ ++ +E+ + +L L+ + + P V Y+
Sbjct: 106 KELFSLLSTYKDR-----QLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNV 160
Query: 458 LISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQS 517
++ + + F++ LF + + + + TY+TLI+ G+ A +M Q
Sbjct: 161 VLRNVLRAK-QFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQD 219
Query: 518 CLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLA 577
+ D V Y+ LI + + + + A ++F + R G P+L Y +I+ + K A
Sbjct: 220 RVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREA 279
Query: 578 TQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK-ANCIL 625
L EM G+ P+ V+Y+ L++ Y ++ + E +F EMK NC L
Sbjct: 280 RLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCAL 328
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/343 (19%), Positives = 123/343 (35%), Gaps = 48/343 (13%)
Query: 141 NVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLME 200
N++I V+ M++ A ++F S + + +E ++ S N +L+ +
Sbjct: 334 NIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQR 393
Query: 201 TGPLPNIHTYTIMMSCGDIRL----AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDV 256
N+ TY M+ + A ++ ++ G P +TY T I + G +D
Sbjct: 394 KDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 453
Query: 257 AHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLN 316
A L +KL ++ + +I + + G + A +L E+K PD +
Sbjct: 454 AATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAIT 509
Query: 317 AFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQN 376
K G I + +I N Q Y +EV+ M
Sbjct: 510 ILAKAGRTEEATWVFRQAFESGEVKDISVFGCMI----NLYSRNQRYVNVIEVFEKMRTA 565
Query: 377 AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMA 436
P++ + +L + ++ +F +A T+ + E+G C
Sbjct: 566 GYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEG---------------C-------- 602
Query: 437 LELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRL 479
V P V++ L + +FEMVE LF RL
Sbjct: 603 -----------VFPDEVHFQML--SLYSSKKDFEMVESLFQRL 632
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 117/439 (26%), Positives = 194/439 (44%), Gaps = 43/439 (9%)
Query: 201 TGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDV 256
TG P+I Y ++ + G + A E L + G PT VT+ I GL + G +D
Sbjct: 460 TGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDK 519
Query: 257 AHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS-YNMLL 315
A L K ++ +++ GFC G ++ A E ++ FP S Y L
Sbjct: 520 AEAFYESLEHKSRENDA----SMVKGFCAAGCLDHAFERFIRLE----FPLPKSVYFTLF 571
Query: 316 NAFCKKGD-VXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCK-NKLKGQQLYDKSLEVYNS 372
+ C + D + ++P Y LI C+ N ++ K+ E +
Sbjct: 572 TSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVR------KAREFFEI 625
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
++ I P+ ++ +CR + ++A L ED + + + +Y+ +++ S
Sbjct: 626 LVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLN-----SD 680
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
P+ L++ M +V+P VV Y+ +I+ + ++ + V LF + + I + TYT
Sbjct: 681 PE--LDMKREMEAFDVIPDVVYYTIMINRYC-HLNDLKKVYALFKDMKRREIVPDVVTYT 737
Query: 493 TLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI 552
L+ K + R EM + PD YT LI C I ++ A +F +M
Sbjct: 738 VLLK-----NKPERNLSR--EMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIES 790
Query: 553 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 612
G P+ YT LI CK+ Y+ A +FD M G+ PDVV YT LIA ++G + +
Sbjct: 791 GVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKA 850
Query: 613 NKLFGEMKANCILLDDGIK 631
KL EM L+ GIK
Sbjct: 851 VKLVKEM------LEKGIK 863
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 112/505 (22%), Positives = 197/505 (39%), Gaps = 79/505 (15%)
Query: 137 VLVFNVLIKVFASNSMLEHAHQVFVSAK-NVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
+ V L+K +A+ M + A +F A ++G I++ NFL+ +
Sbjct: 146 IRVSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFF 205
Query: 196 XXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
+ G + HTY +++ D ++L ++ S V Y +I GLC
Sbjct: 206 WEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLN 265
Query: 252 GYVDVAHKLVRKLHCKLHPLNSH----CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 307
D+A+ L++ L ++ + V+ G C + +A V+ +M+ PD
Sbjct: 266 QMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPD 325
Query: 308 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSL 367
VY Y+ ++ K ++ K++
Sbjct: 326 VYVYSAIIEGHRKNMNIP---------------------------------------KAV 346
Query: 368 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
+V+N ML+ R N +I + IL+ +C+ G F EA L ++F E I+L++ YN +
Sbjct: 347 DVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDAL 406
Query: 428 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFN 487
K + A+EL M + + P V+NY+TLI G + + + L + G T +
Sbjct: 407 GKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFD-LMIEMDGTGKTPD 465
Query: 488 TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQ 547
Y L +A+ M + P V++ +I + E++ A A ++
Sbjct: 466 IVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYE 525
Query: 548 EM---SR------------IGCLPNLY-------------TYTCLIDGFC-KIDYIDLAT 578
+ SR GCL + + Y L C + DYI A
Sbjct: 526 SLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQ 585
Query: 579 QLFDEMKRKGIFPDVVTYTVLI-AW 602
L D M + G+ P+ Y LI AW
Sbjct: 586 DLLDRMWKLGVEPEKSMYGKLIGAW 610
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/354 (18%), Positives = 138/354 (38%), Gaps = 28/354 (7%)
Query: 113 IVGYCKC---DDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLE 169
+ G+C D +FE+F L+ P + F + + A + A + +G+E
Sbjct: 539 VKGFCAAGCLDHAFERF-IRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVE 597
Query: 170 LHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEI 225
L+ L+ +P++ TYTIM++ + + A +
Sbjct: 598 PEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYAL 657
Query: 226 LGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQ 285
+ R P VVTY + D + R++ + + +I+ +C
Sbjct: 658 FEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCH 710
Query: 286 RGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVN 345
+ + + ++MK PDV +Y +LL ++ +KP +
Sbjct: 711 LNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERN-------LSREMKAFDVKPDVFY 763
Query: 346 YTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 404
YT LI CK G+ + +++ M+++ + P+ ++ C+ G +EA +
Sbjct: 764 YTVLIDWQCKIGDLGE-----AKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMI 818
Query: 405 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 458
+ E G+ + Y +I C+ + A++L+ ML++ + P + S +
Sbjct: 819 FDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 1/170 (0%)
Query: 453 VNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFG 512
+ Y ++ G E E E + + K GI + Y+ +I H + KA F
Sbjct: 292 IAYRKVVRGLCYEM-RIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFN 350
Query: 513 EMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 572
+M++ + V ++++ +C + + A LF+E + Y D K+
Sbjct: 351 KMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLG 410
Query: 573 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
++ A +LF EM KGI PDV+ YT LI G+ + L EM
Sbjct: 411 KVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGT 460
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 116/229 (50%), Gaps = 1/229 (0%)
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
M Q+ I+ + +I I+ C++G A L + HE+GI N +YN +I C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
A +L+ M+++ + P +V +S LI+ F KE+ E E ++ +++ I T TY
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSE-AEEIYKEMLRWSIFPTTITYN 119
Query: 493 TLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI 552
++I + + A M PD V+++ LI +C + ++ +F EM R
Sbjct: 120 SMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRR 179
Query: 553 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 601
G + N TYT LI GFC++ +D A L +EM G+ PD +T+ ++A
Sbjct: 180 GIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLA 228
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 124/251 (49%), Gaps = 11/251 (4%)
Query: 339 IKPSIVNYTSLI-LLCK--NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
IK +V T+++ LCK N + Q L+ M + I PN + N ++ C
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLF-------TEMHEKGIFPNVLTYNCMIDSFCHS 58
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
G++ +A LL E+ IN + +++ +I+ KE A E+ ML+ ++ P + Y
Sbjct: 59 GRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITY 118
Query: 456 STLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMI 515
+++I GF K Q + +R+ + G + + T++TLI+ + + ++ F EM
Sbjct: 119 NSMIDGFCK-QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 177
Query: 516 QSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 575
+ + + V+YT LI FC + +++ A L EM G P+ T+ C++ G C +
Sbjct: 178 RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELR 237
Query: 576 LATQLFDEMKR 586
A + +++++
Sbjct: 238 KAFAILEDLQK 248
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 101/197 (51%), Gaps = 1/197 (0%)
Query: 423 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKA 482
I+ +CK+ A L M ++ + P V+ Y+ +I F + ++L +++
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFC-HSGRWSDADQLLRHMIEK 74
Query: 483 GITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVA 542
I + T++ LI+ + RK +A + EM++ + P ++Y ++I FC ++ A
Sbjct: 75 QINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDA 134
Query: 543 CALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAW 602
+ M+ GC P++ T++ LI+G+CK +D ++F EM R+GI + VTYT LI
Sbjct: 135 KRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHG 194
Query: 603 YHKHGRIGEKNKLFGEM 619
+ + G + L EM
Sbjct: 195 FCQVGDLDAAQDLLNEM 211
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 1/177 (0%)
Query: 443 MLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTR 502
M + ++ VV + ++ K+ ++ + LFT + + GI N TY +I +
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHIN-AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSG 59
Query: 503 KRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYT 562
+ A MI+ + PD V+++ALI F R+++ A +++EM R P TY
Sbjct: 60 RWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYN 119
Query: 563 CLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
+IDGFCK D +D A ++ D M KG PDVVT++ LI Y K R+ ++F EM
Sbjct: 120 SMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 176
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 114/240 (47%), Gaps = 5/240 (2%)
Query: 278 AVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXC 337
A++ C+ G A + EM FP+V +YN ++++FC G
Sbjct: 15 AIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEK 74
Query: 338 QIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQ 397
QI P IV +++LI N ++ ++ E+Y ML+ +I P TI N ++ C++ +
Sbjct: 75 QINPDIVTFSALI----NAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDR 130
Query: 398 FREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYST 457
+A +L+ +G + + +++ +I+ CK +E+ M +R ++ V Y+T
Sbjct: 131 VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 190
Query: 458 LISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQS 517
LI GF + + + + L ++ G+ + T+ +++ ++ KA+ ++ +S
Sbjct: 191 LIHGFC-QVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 101/230 (43%), Gaps = 6/230 (2%)
Query: 238 VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 297
VV + LC+ G A L ++H K N +N +I FC G ++A ++L
Sbjct: 10 VVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLR 69
Query: 298 EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNK 356
M + PD+ +++ L+NAF K+ V I P+ + Y S+I CK
Sbjct: 70 HMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCK-- 127
Query: 357 LKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLN 416
Q D + + +SM P+ + + ++ +C+ + + + + H +GI N
Sbjct: 128 ---QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 184
Query: 417 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ 466
+Y +IH C+ A +L+ M+ V P + + +++G ++
Sbjct: 185 TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKK 234
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 99/224 (44%), Gaps = 4/224 (1%)
Query: 222 AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIH 281
A + +++ G P V+TY I C G A +L+R + K + F+A+I+
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 282 GFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKP 341
F + V+EA E+ +EM FP +YN +++ FCK+ V P
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 342 SIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREA 401
+V +++LI N + D +E++ M + I NT+ ++ C+ G A
Sbjct: 149 DVVTFSTLI----NGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAA 204
Query: 402 LTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLK 445
LL + G+ + +++ ++ +C + + A ++ + K
Sbjct: 205 QDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 4/193 (2%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
+VL +N +I F + A Q+ + I + + L+
Sbjct: 44 NVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIY 103
Query: 196 XXLMETGPLPNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
++ P TY M+ C R+ A +L + G +P VVT+ T I G C+
Sbjct: 104 KEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKA 163
Query: 252 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 311
VD ++ ++H + N+ + +IHGFCQ G ++ A ++L EM S PD ++
Sbjct: 164 KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITF 223
Query: 312 NMLLNAFCKKGDV 324
+ +L C K ++
Sbjct: 224 HCMLAGLCSKKEL 236
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 163/365 (44%), Gaps = 13/365 (3%)
Query: 240 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 299
YG I LC A ++V + K +NA+IHG C+ G A ++LEE
Sbjct: 309 AYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEG 368
Query: 300 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 359
FP Y+Y +L+ + CK+ D ++ + T + + L+G
Sbjct: 369 SEFEFFPSEYTYKLLMESLCKELDTGKARNVLEL----MLRKEGADRTRIYNI---YLRG 421
Query: 360 QQLYDKSLEVYN---SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI-NL 415
+ D E+ N SMLQ RP+ N ++ C+ G+ +A+ +L+D
Sbjct: 422 LCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAP 481
Query: 416 NQYSYNEIIHMICKESYPKMALELMPRMLKRN-VLPGVVNYSTLISGFAKEQSNFEMVER 474
+ + N ++ + + + AL+++ R++ N + PGVV Y+ +I G K E +
Sbjct: 482 DAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMS- 540
Query: 475 LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFC 534
+F +L KA +T ++ TY +I T K A + ++I D Y A + C
Sbjct: 541 VFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLC 600
Query: 535 NIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 594
++ AC +++ G +PN+ Y +I + A Q+ +EM++ G PD V
Sbjct: 601 QSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAV 660
Query: 595 TYTVL 599
T+ +L
Sbjct: 661 TWRIL 665
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 108/549 (19%), Positives = 208/549 (37%), Gaps = 80/549 (14%)
Query: 153 LEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLM--ETGPLPNIHTY 210
+ AH+ F+ G R+CN ++ L L+ + +P++ Y
Sbjct: 106 FDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNY 165
Query: 211 TIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH- 265
+M+ C R+ A +++ + G P VVT+ T I G CE ++VAHK+ ++
Sbjct: 166 NRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRV 225
Query: 266 CKLHPLNSHCFNAVIHGF----------------------------------------CQ 285
C + P NS + +I GF C+
Sbjct: 226 CGIRP-NSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCR 284
Query: 286 RGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVN 345
G N+ E+ E M + ++Y ++++ C+ +KP +
Sbjct: 285 EGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTS 344
Query: 346 YTSLI-LLCKNK--LKGQQLYDKSLE----------------------------VYNSML 374
Y ++I LCK+ ++ QL ++ E V ML
Sbjct: 345 YNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELML 404
Query: 375 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 434
+ T I N LR C E L +L + ++Y+ N +I+ +CK
Sbjct: 405 RKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVD 464
Query: 435 MALELMPRMLK-RNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTT 493
A++++ M+ + P V +T++ G + E ++ L + + I Y
Sbjct: 465 DAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNA 524
Query: 494 LISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIG 553
+I + K +A FG++ ++ + D +Y +I C ++++A + ++
Sbjct: 525 VIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPS 584
Query: 554 CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKN 613
+ + Y + G C+ Y+ A ++ G P+VV Y +IA + G E
Sbjct: 585 GRHDAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAY 644
Query: 614 KLFGEMKAN 622
++ EM+ N
Sbjct: 645 QILEEMRKN 653
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 4/203 (1%)
Query: 420 YNEIIHMICK-ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTR 478
+ IH IC P AL ++ + R P +N S++I + F+ R F
Sbjct: 57 WRRRIHSICAVRRNPDEALRILDGLCLRGYRPDSLNLSSVIHSLC-DAGRFDEAHRRFLL 115
Query: 479 LVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMI--QSCLCPDEVSYTALIAVFCNI 536
+ +G + +T +I+ +R +I + P +Y L+ C I
Sbjct: 116 FLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTI 175
Query: 537 REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTY 596
+ A L +M G LP++ T+T LI G+C+I +++A ++FDEM+ GI P+ +T
Sbjct: 176 YRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTL 235
Query: 597 TVLIAWYHKHGRIGEKNKLFGEM 619
+VLI + K + KL E+
Sbjct: 236 SVLIGGFLKMRDVETGRKLMKEL 258
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 83/437 (18%), Positives = 170/437 (38%), Gaps = 56/437 (12%)
Query: 222 AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHK-------------------LVR 262
A IL + G P + + I LC+ G D AH+ ++
Sbjct: 74 ALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIA 133
Query: 263 KLHCKLHPLNS------------------HCFNAVIHGFCQRGAVNEALEVLEEMKSSRT 304
+L P+++ +N +++ C V +A +++ +M++
Sbjct: 134 RLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGH 193
Query: 305 FPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI---LLCKNKLKGQQ 361
PDV ++ L+ +C+ ++ C I+P+ + + LI L ++ G++
Sbjct: 194 LPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRK 253
Query: 362 LYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHE-QGINLNQYSY 420
L + E + +++ +++ CREG F + + E+ + +N+ +++Y
Sbjct: 254 LMKELWEYMKNETDTSMKAAAFA--NLVDSMCREGYFNDIFEIAENMSLCESVNV-EFAY 310
Query: 421 NEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLV 480
+I +C+ A ++ M + + P +Y+ +I G K+ + L+
Sbjct: 311 GHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQ-----LL 365
Query: 481 KAGITF----NTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNI 536
+ G F + TY L+ + KA M++ Y + C +
Sbjct: 366 EEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVM 425
Query: 537 REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIF--PDVV 594
+ M + C P+ YT +I+G CK+ +D A ++ D+M G F PD V
Sbjct: 426 DNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMM-TGKFCAPDAV 484
Query: 595 TYTVLIAWYHKHGRIGE 611
T ++ GR E
Sbjct: 485 TLNTVMCGLLAQGRAEE 501
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 94/224 (41%), Gaps = 40/224 (17%)
Query: 364 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 423
D++L + + + RP+++ + ++ C G+F EA F G ++ + N I
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 424 IHMICKESYPKMALELMPRML--KRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVK 481
I + P L ++ R++ K+ +P + NY+ L++ R++
Sbjct: 132 IARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLCT-----------IYRVID 180
Query: 482 A-GITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMN 540
A + F+ + L PD V++T LI +C IRE+
Sbjct: 181 AHKLVFDMRNRGHL--------------------------PDVVTFTTLIGGYCEIRELE 214
Query: 541 VACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM 584
VA +F EM G PN T + LI GF K+ ++ +L E+
Sbjct: 215 VAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKEL 258
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 182/404 (45%), Gaps = 10/404 (2%)
Query: 217 GDIRLAAE-ILGKIYRSGGNPTVVTYGTYIRGLC-ECGYVDVAHKLVRKLHCKLHPLNSH 274
G+I + E +LG+I R N V LC + Y+ ++ + ++ PL
Sbjct: 455 GNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPL-PF 513
Query: 275 CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 334
+N+VI Q + + ++ ++ PDV +Y +++N CKK D
Sbjct: 514 SYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAM 573
Query: 335 XXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 394
++P++ Y+S+I L Q ++ E + ML++ I+P+ I ++ + R
Sbjct: 574 EELGLRPTVAIYSSII----GSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYAR 629
Query: 395 EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 454
G+ EA L+E+ + + + ++Y +I K + + + +ML+ + P VV
Sbjct: 630 NGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVL 689
Query: 455 YSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEM 514
Y+ LI F K + +F+ LF + + I + Y TL+S R R K E
Sbjct: 690 YTALIGHFLK-KGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEP 748
Query: 515 IQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI--GCLPNLYTYTCLIDGFCKID 572
+ L + L+++ ++ + + ++ +PNLY + +I G+C
Sbjct: 749 GKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAG 808
Query: 573 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 616
+D A + M+++GI P++VTYT+L+ + + G I LF
Sbjct: 809 RLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF 852
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 181/420 (43%), Gaps = 28/420 (6%)
Query: 214 MSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL-VRKLHCKLHPLN 272
M G + + ++ + G V TY I C+ G VD A +L V + N
Sbjct: 318 MKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRN 377
Query: 273 SHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAF--CKKGDVXXXXXX 330
HC+ +I GF ++G +++A+++L M + PD +Y +LL C +
Sbjct: 378 VHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQ 437
Query: 331 XXXXXXCQIKPSIVNYTSLI------LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTII 384
C I P +++ I LL + K L L V + L
Sbjct: 438 SILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTAL---------- 487
Query: 385 CNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRML 444
C + + AL+ +E G +SYN +I + +E+ + L+ +
Sbjct: 488 --------CSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQ 539
Query: 445 KRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKR 504
+ + +P V Y +++ K +++ + + + + G+ Y+++I G+ +
Sbjct: 540 ELDFVPDVDTYLIVVNELCK-KNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRV 598
Query: 505 HKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCL 564
+A F +M++S + PDE++Y +I + ++ A L +E+ + P+ +TYT L
Sbjct: 599 VEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVL 658
Query: 565 IDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 624
I GF K+ ++ Q D+M G+ P+VV YT LI + K G LFG M N I
Sbjct: 659 ISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDI 718
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/460 (22%), Positives = 196/460 (42%), Gaps = 30/460 (6%)
Query: 174 SCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--C--GDIRLAAEILGKI 229
S N ++KCL + E +P++ TY I+++ C D A I+ +
Sbjct: 514 SYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAM 573
Query: 230 YRSGGNPTVVTYGTYIRGLCECG-YVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGA 288
G PTV Y + I L + G V+ + L + P + + +I+ + + G
Sbjct: 574 EELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQP-DEIAYMIMINTYARNGR 632
Query: 289 VNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTS 348
++EA E++EE+ P ++Y +L++ F K G + + P++V YT+
Sbjct: 633 IDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTA 692
Query: 349 LI--LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTI----ICNHILRVHCREGQFREAL 402
LI L K K S ++ M +N I+ + I + + + R R+ ++
Sbjct: 693 LIGHFLKKGDFK------FSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARK---KKRQ 743
Query: 403 TLLEDFHEQGIN--LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 460
++E E+ + + I + A+E++ + +K++++P + ++T+I+
Sbjct: 744 VIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGK-VKKSIIPNLYLHNTIIT 802
Query: 461 GFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLC 520
G+ E L + K GI N TYT L+ H A ++ + C
Sbjct: 803 GYCAAGRLDEAYNHL-ESMQKEGIVPNLVTYTILMKSHIEAGDIESAI----DLFEGTNC 857
Query: 521 -PDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 579
PD+V Y+ L+ C+ + A AL EM + G PN +Y L+ C A +
Sbjct: 858 EPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVK 917
Query: 580 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
+ +M I+P + +T LI + ++ E LF M
Sbjct: 918 VVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIM 957
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/416 (20%), Positives = 169/416 (40%), Gaps = 40/416 (9%)
Query: 246 RGLCECGYVDVAHKLVRKLHCKLH--PLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSR 303
+GLC G+++ A ++ L C + PL + + ++ + FC+RG EA + + M+
Sbjct: 209 KGLCGHGHLNEAIGMLDTL-CGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDG 267
Query: 304 TFPDVYSYNMLLNAFCKKGDVXXXXXX--XXXXXXCQIKPSIVNYTSLILLCKNKLKGQQ 361
+ D Y L+ +CK ++ ++ P I N +LI +
Sbjct: 268 YYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFN--TLI----HGFMKLG 321
Query: 362 LYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL-LEDFHEQGINLNQYSY 420
+ DK +++ M++ ++ N + ++ +C+EG AL L + + + I+ N + Y
Sbjct: 322 MLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCY 381
Query: 421 NEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK---------------- 464
+I K+ A++L+ RML ++P + Y L+ K
Sbjct: 382 TNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILD 441
Query: 465 -----------EQSNFEM-VERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFG 512
+ N E+ VE L + + + + R A R
Sbjct: 442 NGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIE 501
Query: 513 EMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 572
+M+ P SY ++I + +L + + +P++ TY +++ CK +
Sbjct: 502 KMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKN 561
Query: 573 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 628
D A + D M+ G+ P V Y+ +I K GR+ E + F +M + I D+
Sbjct: 562 DRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDE 617
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 154/391 (39%), Gaps = 41/391 (10%)
Query: 200 ETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 255
E G P + Y+ ++ G + A E K+ SG P + Y I G +D
Sbjct: 575 ELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRID 634
Query: 256 VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLL 315
A++LV ++ +S + +I GF + G + + + L++M P+V Y L+
Sbjct: 635 EANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALI 694
Query: 316 NAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSL-----------------ILLCKNKLK 358
F KKGD IK + Y +L + K KL
Sbjct: 695 GHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLL 754
Query: 359 GQQLYDKSLEVYNSMLQN----------------AIRPNTIICNHILRVHCREGQFREAL 402
+ + K L S L N +I PN + N I+ +C G+ EA
Sbjct: 755 QRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAY 814
Query: 403 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 462
LE ++GI N +Y ++ + + A++L N P V YSTL+ G
Sbjct: 815 NHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE---GTNCEPDQVMYSTLLKGL 871
Query: 463 AKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPD 522
+ + + L + K+GI N +Y L+ +R +A +M + P
Sbjct: 872 CDFKRPLDALA-LMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPR 930
Query: 523 EVSYTALIAVFCNIREMNVACALFQEMSRIG 553
+++T LI + C +++ A ALF M + G
Sbjct: 931 SINHTWLIYILCEEKKLREARALFAIMVQSG 961
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 86/433 (19%), Positives = 174/433 (40%), Gaps = 87/433 (20%)
Query: 68 IAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFS 127
+ E+ F +E+ + Y I+I+T+A G E L+ ++V + SF
Sbjct: 599 VEAEETFAKMLESGIQPDEIAYM-IMINTYARNGRIDEANELVEEVVKHFLRPSSF---- 653
Query: 128 TLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXX 187
+ VLI F M+E + C +L K
Sbjct: 654 -----------TYTVLISGFVKMGMME------------------KGCQYLDK------- 677
Query: 188 XXXXXXXXXXLMETGPLPNIHTYTIM----MSCGDIRLAAEILGKIYRSGGNPTVVTYGT 243
++E G PN+ YT + + GD + + + G + + + Y T
Sbjct: 678 ----------MLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYIT 727
Query: 244 YIRGL-------------CECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVN 290
+ GL E G + +L+R PL S + G+ +
Sbjct: 728 LLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRT-----KPLVS-----IPSSLGNYGSKS 777
Query: 291 EALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI 350
A+EV+ ++K S P++Y +N ++ +C G + I P++V YT
Sbjct: 778 FAMEVIGKVKKS-IIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYT--- 833
Query: 351 LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHE 410
+L K+ ++ + + +++++ P+ ++ + +L+ C + +AL L+ + +
Sbjct: 834 ILMKSHIEAGDI-ESAIDLFEG---TNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQK 889
Query: 411 QGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFE 470
GIN N+ SY +++ +C A++++ M ++ P +N++ LI +E+ E
Sbjct: 890 SGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLRE 949
Query: 471 MVERLFTRLVKAG 483
LF +V++G
Sbjct: 950 -ARALFAIMVQSG 961
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 112/267 (41%), Gaps = 3/267 (1%)
Query: 363 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 422
+D++ + ++ + P+ + ++ C + +F EA E E+G L +
Sbjct: 147 FDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERGSGLWLWCCKR 206
Query: 423 IIHMICKESYPKMALELMPRMLKRNVLPGVVN-YSTLISGFAKEQSNFEMVERLFTRLVK 481
+ +C + A+ ++ + +P VN Y +L F K E E LF +
Sbjct: 207 LFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAE-AEALFDHMEV 265
Query: 482 AGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNV 541
G + YT L+ + + A + M++ D + LI F + ++
Sbjct: 266 DGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDK 325
Query: 542 ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLF-DEMKRKGIFPDVVTYTVLI 600
+F +M + G N++TY +I +CK +D A +LF + + I +V YT LI
Sbjct: 326 GRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLI 385
Query: 601 AWYHKHGRIGEKNKLFGEMKANCILLD 627
++K G + + L M N I+ D
Sbjct: 386 FGFYKKGGMDKAVDLLMRMLDNGIVPD 412
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 133/597 (22%), Positives = 238/597 (39%), Gaps = 105/597 (17%)
Query: 73 KFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEV-----FALLRDIVGYCKCDDSFEQFS 127
+F WV GFSH F +++ F +L V F++ R G K D +
Sbjct: 86 RFFDWVSNKGFSHKEQSFFLMLE-FLGRARNLNVARNFLFSIERRSNGCVKLQDRY---- 140
Query: 128 TLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXX 187
FN LI+ + + + + + ++F + K +G+ + + N LL
Sbjct: 141 ------------FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLL-------- 180
Query: 188 XXXXXXXXXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRS-GGNPTVVTYGTYIR 246
+I++ G +A ++ ++ R+ G P T+ T I
Sbjct: 181 -----------------------SILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLIN 217
Query: 247 GLCECGYVDVAHKLVRKL---HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM--KS 301
G C+ VD A ++ + + HC +P + +N +I G C+ G V A VL M K+
Sbjct: 218 GFCKNSMVDEAFRIFKDMELYHC--NP-DVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKA 274
Query: 302 SRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQ 361
+ P+V SY L+ +C K ++ +KP+ V Y +LI L
Sbjct: 275 TDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLI----KGLSEAH 330
Query: 362 LYD--KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 419
YD K + + + P+ N +++ HC G A+ + ++ ++ + S
Sbjct: 331 RYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSAS 390
Query: 420 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK------EQSNFEMVE 473
Y+ +I +C + A L + ++ VL G L + + + E
Sbjct: 391 YSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAE 450
Query: 474 RLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVF 533
++F +L+K G+ + +Y TLI+ H R K AY M++ PD +Y LI
Sbjct: 451 KVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGL 509
Query: 534 CNIREMNVACALFQEMSRIGCLPNLYTYTCLI----------DGFCKIDY---------I 574
I E +A Q M R LP T+ ++ + FC + I
Sbjct: 510 LKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNI 569
Query: 575 DLATQ----LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
DL+TQ LF +++ F +++ + +G + + +L G + N LLD
Sbjct: 570 DLSTQVVRLLFSSAQKEKAF-------LIVRLLYDNGYLVKMEELLGYLCENRKLLD 619
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/548 (20%), Positives = 224/548 (40%), Gaps = 32/548 (5%)
Query: 86 SVNYFRIIIHTFAMAG---MHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNV 142
S+N F ++ FA G L +F ++ + +CK ++ ++ +
Sbjct: 104 SLNDFALVFKEFAGRGDWQRSLRLFKYMQRQI-WCKPNEH----------------IYTI 146
Query: 143 LIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETG 202
+I + +L+ +VF + G+ + S L+ +
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEK 206
Query: 203 PLPNIHTY-TIMMSCGDIRLAAE----ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 257
P+I TY T++ +C L E + ++ G P +VTY T + G D A
Sbjct: 207 ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEA 266
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
+ R ++ + ++ ++ F + + + ++L EM S + PD+ SYN+LL A
Sbjct: 267 EMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEA 326
Query: 318 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQ-LYDKSLEVYNSMLQN 376
+ K G + P+ Y+ L+ L GQ YD +++ M +
Sbjct: 327 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL-----NLFGQSGRYDDVRQLFLEMKSS 381
Query: 377 AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMA 436
P+ N ++ V G F+E +TL D E+ I + +Y II K + A
Sbjct: 382 NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDA 441
Query: 437 LELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLIS 496
+++ M +++P Y+ +I F + + +E F + + G + +T+ +L+
Sbjct: 442 RKILQYMTANDIVPSSKAYTGVIEAFG-QAALYEEALVAFNTMHEVGSNPSIETFHSLLY 500
Query: 497 IHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLP 556
R ++ ++ S + + ++ A I + + A + +M + C P
Sbjct: 501 SFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDP 560
Query: 557 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 616
+ T ++ + +D + F+EMK I P ++ Y +++A Y K R + N+L
Sbjct: 561 DERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELL 620
Query: 617 GEMKANCI 624
EM +N +
Sbjct: 621 EEMLSNRV 628
Score = 108 bits (271), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 105/564 (18%), Positives = 226/564 (40%), Gaps = 62/564 (10%)
Query: 80 THGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLV 139
+ G S SV + +I+ + G + LL + E+ S S+L
Sbjct: 169 SQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKN--------EKISP-------SILT 213
Query: 140 FNVLIKVFASNSM-LEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 198
+N +I A + E +F ++ G++ I + N LL +
Sbjct: 214 YNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM 273
Query: 199 METGPLPNIHTYT-IMMSCGDIRL---AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 254
+ G +P++ TY+ ++ + G +R ++LG++ G P + +Y + + G +
Sbjct: 274 NDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSI 333
Query: 255 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 314
A + ++ N++ ++ +++ F Q G ++ ++ EMKSS T PD +YN+L
Sbjct: 334 KEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNIL 393
Query: 315 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML 374
+ F + G I+P + Y +I C KG L++ + ++ M
Sbjct: 394 IEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACG---KGG-LHEDARKILQYMT 449
Query: 375 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 434
N I P++ ++ + + EAL HE G N + +++ +++ + K
Sbjct: 450 ANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVK 509
Query: 435 MALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTL 494
+ ++ R++ + ++ I + K+ FE + + + K+ + +T +
Sbjct: 510 ESEAILSRLVDSGIPRNRDTFNAQIEAY-KQGGKFEEAVKTYVDMEKSRCDPDERTLEAV 568
Query: 495 ISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM--SRI 552
+S++ R + +F EM S + P + Y ++AV+ + L +EM +R+
Sbjct: 569 LSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRV 628
Query: 553 ----------------------------------GCLPNLYTYTCLIDGFCKIDYIDLAT 578
GC + Y L+D + + A
Sbjct: 629 SNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAA 688
Query: 579 QLFDEMKRKGIFPDVVTYTVLIAW 602
++ +E ++G+FP++ L+ W
Sbjct: 689 RVLNEATKRGLFPELFRKNKLV-W 711
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/322 (25%), Positives = 128/322 (39%), Gaps = 41/322 (12%)
Query: 340 KPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFR 399
KP+ YT +I L L + L DK LEV++ M + + ++ + R G++
Sbjct: 138 KPNEHIYTIMISL----LGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYE 193
Query: 400 EALTLLEDFHEQGINLNQYSYNEIIHMICKESYP-KMALELMPRMLKRNVLPGVVNYSTL 458
+L LL+ + I+ + +YN +I+ + + L L M + P +V Y+TL
Sbjct: 194 TSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTL 253
Query: 459 ISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSC 518
+S A E E +F + GI + TY+ L+ G+ R+ K GEM
Sbjct: 254 LSACAIRGLGDE-AEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGG 312
Query: 519 LCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNL-------------------- 558
PD SY L+ + + A +F +M GC PN
Sbjct: 313 SLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVR 372
Query: 559 ---------------YTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWY 603
TY LI+ F + Y LF +M + I PD+ TY +I
Sbjct: 373 QLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFAC 432
Query: 604 HKHGRIGEKNKLFGEMKANCIL 625
K G + K+ M AN I+
Sbjct: 433 GKGGLHEDARKILQYMTANDIV 454
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/462 (21%), Positives = 174/462 (37%), Gaps = 47/462 (10%)
Query: 205 PNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 260
PN H YTIM+S G + E+ ++ G + +V +Y I G + + +L
Sbjct: 139 PNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLEL 198
Query: 261 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEA--LEVLEEMKSSRTFPDVYSYNMLLNAF 318
+ ++ + + +N VI+ C RG ++ L + EM+ PD+ +YN LL+A
Sbjct: 199 LDRMKNEKISPSILTYNTVINA-CARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSAC 257
Query: 319 CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAI 378
+G I P + Y+ L+ KL+ +K ++ M
Sbjct: 258 AIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETF-GKLR---RLEKVCDLLGEMASGGS 313
Query: 379 RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 438
P+ N +L + + G +EA+ + G N +Y+ ++++ + +
Sbjct: 314 LPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQ 373
Query: 439 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIH 498
L M N P Y+ LI F E F+ V LF +V+ I + +TY +I
Sbjct: 374 LFLEMKSSNTDPDAATYNILIEVFG-EGGYFKEVVTLFHDMVEENIEPDMETYEGIIFAC 432
Query: 499 GRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNL 558
G+ A M + + P +YT +I F A F M +G P++
Sbjct: 433 GKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSI 492
Query: 559 YTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL--- 615
T+ L+ F + + + + + GI + T+ I Y + G+ E K
Sbjct: 493 ETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVD 552
Query: 616 --------------------------------FGEMKANCIL 625
F EMKA+ IL
Sbjct: 553 MEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDIL 594
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 4/175 (2%)
Query: 455 YSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEM 514
Y+ +IS +E + +E +F + G++ + +YT LI+ +GR + + M
Sbjct: 144 YTIMISLLGREGLLDKCLE-VFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRM 202
Query: 515 IQSCLCPDEVSYTALI-AVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 573
+ P ++Y +I A + LF EM G P++ TY L+ C I
Sbjct: 203 KNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSA-CAIRG 261
Query: 574 I-DLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
+ D A +F M GI PD+ TY+ L+ + K R+ + L GEM + L D
Sbjct: 262 LGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD 316
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 165/402 (41%), Gaps = 44/402 (10%)
Query: 236 PTVVTYGTYIRGLCECGYVDVAHKLVRKL---HCKLHPLNSHCFNAVIHGFCQR-GAVNE 291
PT TY I+ C G ++ A ++ ++ H + +NA I G +R G E
Sbjct: 210 PTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEE 269
Query: 292 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL 351
A++V + MK R P +YN+++N + K +Y S L
Sbjct: 270 AIDVFQRMKRDRCKPTTETYNLMINLYGKASK---------------------SYMSWKL 308
Query: 352 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 411
C+ M + +PN ++ REG +A + E E
Sbjct: 309 YCE------------------MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 350
Query: 412 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEM 471
G+ + Y YN ++ + YP A E+ M P +Y+ ++ + + + +
Sbjct: 351 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD- 409
Query: 472 VERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIA 531
E +F + + GI K++ L+S + + R K EM ++ + PD +++
Sbjct: 410 AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN 469
Query: 532 VFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFP 591
++ + + + EM C ++ TY LI+ + K +++ +LF E+K K P
Sbjct: 470 LYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRP 529
Query: 592 DVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKL 633
DVVT+T I Y + + ++F EM + D G K+
Sbjct: 530 DVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKV 571
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 118/249 (47%), Gaps = 3/249 (1%)
Query: 375 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 434
+++ +P+ I N ++ + ++ Q++EA +L E + +Y +I C +
Sbjct: 170 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 229
Query: 435 MALELMPRMLKRNVLP---GVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
A ++ M +V P GV Y+ I G K + N E +F R+ + T+TY
Sbjct: 230 RAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 289
Query: 492 TTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR 551
+I+++G+ K + ++ + EM P+ +YTAL+ F A +F+++
Sbjct: 290 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 349
Query: 552 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
G P++Y Y L++ + + Y A ++F M+ G PD +Y +++ Y + G +
Sbjct: 350 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 409
Query: 612 KNKLFGEMK 620
+F EMK
Sbjct: 410 AEAVFEEMK 418
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 137/327 (41%), Gaps = 11/327 (3%)
Query: 299 MKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKL 357
++ S PDV +N+L++A+ +K + P+ Y LI C +
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYC---M 224
Query: 358 KGQQLYDKSLEVYNSMLQNAIRPNTIICN----HILRVHCREGQFREALTLLEDFHEQGI 413
G L +++ V M + + P TI +I + R+G EA+ + +
Sbjct: 225 AG--LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC 282
Query: 414 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 473
+YN +I++ K S M+ +L M P + Y+ L++ FA+E E E
Sbjct: 283 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFARE-GLCEKAE 341
Query: 474 RLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVF 533
+F +L + G+ + Y L+ + R + A F M PD SY ++ +
Sbjct: 342 EIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAY 401
Query: 534 CNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 593
+ A A+F+EM R+G P + ++ L+ + K + + EM G+ PD
Sbjct: 402 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDT 461
Query: 594 VTYTVLIAWYHKHGRIGEKNKLFGEMK 620
++ Y + G+ + K+ EM+
Sbjct: 462 FVLNSMLNLYGRLGQFTKMEKILAEME 488
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 123/303 (40%), Gaps = 12/303 (3%)
Query: 116 YCKCDDSFEQFSTLLDLPHH----SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELH 171
Y K S+ + ++ H ++ + L+ FA + E A ++F + GLE
Sbjct: 296 YGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPD 355
Query: 172 IRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC-GDIRL---AAEILG 227
+ N L++ + G P+ +Y IM+ G L A +
Sbjct: 356 VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE 415
Query: 228 KIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRG 287
++ R G PT+ ++ + + V +V+++ ++ N++++ + + G
Sbjct: 416 EMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLG 475
Query: 288 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYT 347
+ ++L EM++ D+ +YN+L+N + K G + +P +V +T
Sbjct: 476 QFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 535
Query: 348 SLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 407
S I K +LY K LEV+ M+ + P+ +L E Q + ++L
Sbjct: 536 SRIGAYSRK----KLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRT 591
Query: 408 FHE 410
H+
Sbjct: 592 MHK 594
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 165/402 (41%), Gaps = 44/402 (10%)
Query: 236 PTVVTYGTYIRGLCECGYVDVAHKLVRKL---HCKLHPLNSHCFNAVIHGFCQR-GAVNE 291
PT TY I+ C G ++ A ++ ++ H + +NA I G +R G E
Sbjct: 188 PTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEE 247
Query: 292 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL 351
A++V + MK R P +YN+++N + K +Y S L
Sbjct: 248 AIDVFQRMKRDRCKPTTETYNLMINLYGKASK---------------------SYMSWKL 286
Query: 352 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 411
C+ M + +PN ++ REG +A + E E
Sbjct: 287 YCE------------------MRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQED 328
Query: 412 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEM 471
G+ + Y YN ++ + YP A E+ M P +Y+ ++ + + + +
Sbjct: 329 GLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD- 387
Query: 472 VERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIA 531
E +F + + GI K++ L+S + + R K EM ++ + PD +++
Sbjct: 388 AEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLN 447
Query: 532 VFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFP 591
++ + + + EM C ++ TY LI+ + K +++ +LF E+K K P
Sbjct: 448 LYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRP 507
Query: 592 DVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKL 633
DVVT+T I Y + + ++F EM + D G K+
Sbjct: 508 DVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKV 549
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 118/249 (47%), Gaps = 3/249 (1%)
Query: 375 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 434
+++ +P+ I N ++ + ++ Q++EA +L E + +Y +I C +
Sbjct: 148 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 207
Query: 435 MALELMPRMLKRNVLP---GVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
A ++ M +V P GV Y+ I G K + N E +F R+ + T+TY
Sbjct: 208 RAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 267
Query: 492 TTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR 551
+I+++G+ K + ++ + EM P+ +YTAL+ F A +F+++
Sbjct: 268 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 327
Query: 552 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
G P++Y Y L++ + + Y A ++F M+ G PD +Y +++ Y + G +
Sbjct: 328 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 387
Query: 612 KNKLFGEMK 620
+F EMK
Sbjct: 388 AEAVFEEMK 396
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 137/327 (41%), Gaps = 11/327 (3%)
Query: 299 MKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKL 357
++ S PDV +N+L++A+ +K + P+ Y LI C +
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYC---M 202
Query: 358 KGQQLYDKSLEVYNSMLQNAIRPNTIICN----HILRVHCREGQFREALTLLEDFHEQGI 413
G L +++ V M + + P TI +I + R+G EA+ + +
Sbjct: 203 AG--LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC 260
Query: 414 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 473
+YN +I++ K S M+ +L M P + Y+ L++ FA+E E E
Sbjct: 261 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFARE-GLCEKAE 319
Query: 474 RLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVF 533
+F +L + G+ + Y L+ + R + A F M PD SY ++ +
Sbjct: 320 EIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAY 379
Query: 534 CNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 593
+ A A+F+EM R+G P + ++ L+ + K + + EM G+ PD
Sbjct: 380 GRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDT 439
Query: 594 VTYTVLIAWYHKHGRIGEKNKLFGEMK 620
++ Y + G+ + K+ EM+
Sbjct: 440 FVLNSMLNLYGRLGQFTKMEKILAEME 466
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 123/303 (40%), Gaps = 12/303 (3%)
Query: 116 YCKCDDSFEQFSTLLDLPHH----SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELH 171
Y K S+ + ++ H ++ + L+ FA + E A ++F + GLE
Sbjct: 274 YGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPD 333
Query: 172 IRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC-GDIRL---AAEILG 227
+ N L++ + G P+ +Y IM+ G L A +
Sbjct: 334 VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE 393
Query: 228 KIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRG 287
++ R G PT+ ++ + + V +V+++ ++ N++++ + + G
Sbjct: 394 EMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLG 453
Query: 288 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYT 347
+ ++L EM++ D+ +YN+L+N + K G + +P +V +T
Sbjct: 454 QFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 513
Query: 348 SLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 407
S I K +LY K LEV+ M+ + P+ +L E Q + ++L
Sbjct: 514 SRIGAYSRK----KLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRT 569
Query: 408 FHE 410
H+
Sbjct: 570 MHK 572
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 150/348 (43%), Gaps = 7/348 (2%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKG-DVXXXXXXXXXX 334
+NA I G ++A EV E M +PD + +L+ K G
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 335 XXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 393
+K S + L+ C LK +++L + M + IR NTI+ N ++ +
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLK-----EEALVIQTEMEKKGIRSNTIVYNTLMDAYN 390
Query: 394 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 453
+ E L + ++G+ + +YN ++ + P + L+ M + P V
Sbjct: 391 KSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVK 450
Query: 454 NYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE 513
+Y+ LIS + + + +M F R+ K G+ ++ +YT LI + + KAY F E
Sbjct: 451 SYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEE 510
Query: 514 MIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 573
M + + P +YT+++ F + +++ M R TY L+DGF K
Sbjct: 511 MCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGL 570
Query: 574 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 621
A + E + G+ P V+TY +L+ Y + G+ + +L EM A
Sbjct: 571 YIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAA 618
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/341 (19%), Positives = 149/341 (43%), Gaps = 4/341 (1%)
Query: 224 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 283
EI K+ G + +G ++ C+ G + A + ++ K N+ +N ++ +
Sbjct: 330 EIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAY 389
Query: 284 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 343
+ + E + EM+ P +YN+L++A+ ++ ++P++
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNV 449
Query: 344 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 403
+YT LI + +++ D + + + M + ++P++ ++ + G +A
Sbjct: 450 KSYTCLISAYG---RTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYA 506
Query: 404 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 463
E+ ++GI + +Y ++ + +E+ ML+ + + Y+TL+ GFA
Sbjct: 507 SFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFA 566
Query: 464 KEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDE 523
K+ E + + + K G+ + TY L++ + R + K EM L PD
Sbjct: 567 KQGLYIEARD-VVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDS 625
Query: 524 VSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCL 564
++Y+ +I F +R+ A + M + G +P+ +Y L
Sbjct: 626 ITYSTMIYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 82/383 (21%), Positives = 148/383 (38%), Gaps = 50/383 (13%)
Query: 139 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 198
VF L+K F + E A + + G+ + N L+ +
Sbjct: 346 VFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEM 405
Query: 199 METGPLPNIHTYTIMMSCGDIRLAAEILGKIYRS----GGNPTVVTYGTYIRGLCECGYV 254
+ G P+ TY I+M R+ +I+ + R G P V +Y I +
Sbjct: 406 RDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKM 465
Query: 255 D--VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 312
A +R L P +SH + A+IH + G +A EEM
Sbjct: 466 SDMAADAFLRMKKVGLKP-SSHSYTALIHAYSVSGWHEKAYASFEEM------------- 511
Query: 313 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNS 372
CK+G IKPS+ YTS++ + + K +E++
Sbjct: 512 ------CKEG----------------IKPSVETYTSVL----DAFRRSGDTGKLMEIWKL 545
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
ML+ I+ I N +L ++G + EA ++ +F + G+ + +YN +++ +
Sbjct: 546 MLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQ 605
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
+L+ M N+ P + YST+I F + + +F+ +VK+G + ++Y
Sbjct: 606 DAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVR-DFKRAFFYHKMMVKSGQVPDPRSYE 664
Query: 493 TLISI---HGRTRKRHKAYCRFG 512
L +I +T+ R G
Sbjct: 665 KLRAILEDKAKTKNRKDKTAILG 687
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/325 (19%), Positives = 127/325 (39%), Gaps = 34/325 (10%)
Query: 134 HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXX 193
+ +V+N L+ + ++ +E +F ++ GL+ + N L+
Sbjct: 376 RSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVET 435
Query: 194 XXXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
+ + G PN+ +YT ++S YG + + +
Sbjct: 436 LLREMEDLGLEPNVKSYTCLISA------------------------YGR-TKKMSDMA- 469
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
A +R L P +SH + A+IH + G +A EEM P V +Y
Sbjct: 470 ---ADAFLRMKKVGLKP-SSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTS 525
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
+L+AF + GD +IK + + Y +L+ + Q LY ++ +V +
Sbjct: 526 VLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLL----DGFAKQGLYIEARDVVSEF 581
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
+ ++P+ + N ++ + R GQ + LL++ + + +Y+ +I+ +
Sbjct: 582 SKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDF 641
Query: 434 KMALELMPRMLKRNVLPGVVNYSTL 458
K A M+K +P +Y L
Sbjct: 642 KRAFFYHKMMVKSGQVPDPRSYEKL 666
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 187/491 (38%), Gaps = 76/491 (15%)
Query: 123 FEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCL 182
F +FS HS +N+L + + + A Q+F K+ G+ + R FL+
Sbjct: 89 FWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSF 148
Query: 183 XXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYG 242
G + A +L + + G VV
Sbjct: 149 AEK-------------------------------GKLHFATALLLQSFEVEGCCMVVN-- 175
Query: 243 TYIRGLCECGYVDVAHKLVRKLHCKLHPLN-SHCFNAVIHGFCQRGAVNEALEVLEEMKS 301
+ + L + V+ A KL + H + N + FN +I G C G +ALE+L M
Sbjct: 176 SLLNTLVKLDRVEDAMKLFDE-HLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 302 SRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQI-KPSIVNYTSLILLCKNKLKGQ 360
PD+ +YN L+ FCK ++ + P +V YTS+I
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI---------- 284
Query: 361 QLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSY 420
+C+ G+ REA +LL+D GI ++
Sbjct: 285 -----------------------------SGYCKAGKMREASSLLDDMLRLGIYPTNVTF 315
Query: 421 NEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLV 480
N ++ K A E+ +M+ P VV +++LI G+ + RL+ +
Sbjct: 316 NVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR-VGQVSQGFRLWEEMN 374
Query: 481 KAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMN 540
G+ N TY+ LI+ + KA G++ + P Y +I FC ++N
Sbjct: 375 ARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434
Query: 541 VACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
A + +EM + C P+ T+T LI G C + A +F +M G PD +T + L+
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Query: 601 AWYHKHGRIGE 611
+ K G E
Sbjct: 495 SCLLKAGMAKE 505
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 167/383 (43%), Gaps = 8/383 (2%)
Query: 240 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 299
TY R LC+ G D+A ++ + N+ ++ F ++G ++ A +L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 300 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 359
+S N LLN K V Q + LI L G
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILI----RGLCG 218
Query: 360 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI-NLNQY 418
+K+LE+ M P+ + N +++ C+ + +A + +D + + +
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 419 SYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTR 478
+Y +I CK + A L+ ML+ + P V ++ L+ G+AK E + +
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK-AGEMLTAEEIRGK 337
Query: 479 LVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIRE 538
++ G + T+T+LI + R + + + + EM + P+ +Y+ LI CN
Sbjct: 338 MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENR 397
Query: 539 MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTV 598
+ A L +++ +P + Y +IDGFCK ++ A + +EM++K PD +T+T+
Sbjct: 398 LLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTI 457
Query: 599 LIAWYHKHGRIGEKNKLFGEMKA 621
LI + GR+ E +F +M A
Sbjct: 458 LIIGHCMKGRMFEAVSIFHKMVA 480
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 165/353 (46%), Gaps = 47/353 (13%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
+N + C+ G + A ++ E MKS P+ L+++F +KG +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL----------- 154
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
++ + +LL +++G + V NS+L ++ + +
Sbjct: 155 ---------HFATALLLQSFEVEGCCM------VVNSLLNTLVKLDRV------------ 187
Query: 396 GQFREALTLLED-FHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 454
+A+ L ++ Q N + ++N +I +C + ALEL+ M P +V
Sbjct: 188 ---EDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVT 243
Query: 455 YSTLISGFAKEQSNFEMVERLFTRLVKAG--ITFNTKTYTTLISIHGRTRKRHKAYCRFG 512
Y+TLI GF K + +F + VK+G + + TYT++IS + + K +A
Sbjct: 244 YNTLIQGFCK-SNELNKASEMF-KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLD 301
Query: 513 EMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 572
+M++ + P V++ L+ + EM A + +M GC P++ T+T LIDG+C++
Sbjct: 302 DMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVG 361
Query: 573 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 625
+ +L++EM +G+FP+ TY++LI R+ + +L G++ + I+
Sbjct: 362 QVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 130/299 (43%), Gaps = 10/299 (3%)
Query: 109 LLRDIVGYCKCDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVG 167
L+R + G K + + E + ++ +N LI+ F ++ L A ++F K+
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 168 L-ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLA 222
+ + + ++ ++ G P T+ +++ G++ A
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
Query: 223 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHG 282
EI GK+ G P VVT+ + I G C G V +L +++ + N+ ++ +I+
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 283 FCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPS 342
C + +A E+L ++ S P + YN +++ FCK G V + KP
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Query: 343 IVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREA 401
+ +T IL+ + +KG+ +++ +++ M+ P+ I + +L + G +EA
Sbjct: 452 KITFT--ILIIGHCMKGRMF--EAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 187/491 (38%), Gaps = 76/491 (15%)
Query: 123 FEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCL 182
F +FS HS +N+L + + + A Q+F K+ G+ + R FL+
Sbjct: 89 FWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSF 148
Query: 183 XXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYG 242
G + A +L + + G VV
Sbjct: 149 AEK-------------------------------GKLHFATALLLQSFEVEGCCMVVN-- 175
Query: 243 TYIRGLCECGYVDVAHKLVRKLHCKLHPLN-SHCFNAVIHGFCQRGAVNEALEVLEEMKS 301
+ + L + V+ A KL + H + N + FN +I G C G +ALE+L M
Sbjct: 176 SLLNTLVKLDRVEDAMKLFDE-HLRFQSCNDTKTFNILIRGLCGVGKAEKALELLGVMSG 234
Query: 302 SRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQI-KPSIVNYTSLILLCKNKLKGQ 360
PD+ +YN L+ FCK ++ + P +V YTS+I
Sbjct: 235 FGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMI---------- 284
Query: 361 QLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSY 420
+C+ G+ REA +LL+D GI ++
Sbjct: 285 -----------------------------SGYCKAGKMREASSLLDDMLRLGIYPTNVTF 315
Query: 421 NEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLV 480
N ++ K A E+ +M+ P VV +++LI G+ + RL+ +
Sbjct: 316 NVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCR-VGQVSQGFRLWEEMN 374
Query: 481 KAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMN 540
G+ N TY+ LI+ + KA G++ + P Y +I FC ++N
Sbjct: 375 ARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVN 434
Query: 541 VACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
A + +EM + C P+ T+T LI G C + A +F +M G PD +T + L+
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLL 494
Query: 601 AWYHKHGRIGE 611
+ K G E
Sbjct: 495 SCLLKAGMAKE 505
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 167/383 (43%), Gaps = 8/383 (2%)
Query: 240 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 299
TY R LC+ G D+A ++ + N+ ++ F ++G ++ A +L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 300 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 359
+S N LLN K V Q + LI L G
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILI----RGLCG 218
Query: 360 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI-NLNQY 418
+K+LE+ M P+ + N +++ C+ + +A + +D + + +
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 419 SYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTR 478
+Y +I CK + A L+ ML+ + P V ++ L+ G+AK E + +
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK-AGEMLTAEEIRGK 337
Query: 479 LVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIRE 538
++ G + T+T+LI + R + + + + EM + P+ +Y+ LI CN
Sbjct: 338 MISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENR 397
Query: 539 MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTV 598
+ A L +++ +P + Y +IDGFCK ++ A + +EM++K PD +T+T+
Sbjct: 398 LLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTI 457
Query: 599 LIAWYHKHGRIGEKNKLFGEMKA 621
LI + GR+ E +F +M A
Sbjct: 458 LIIGHCMKGRMFEAVSIFHKMVA 480
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 165/353 (46%), Gaps = 47/353 (13%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
+N + C+ G + A ++ E MKS P+ L+++F +KG +
Sbjct: 106 YNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKL----------- 154
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
++ + +LL +++G + V NS+L ++ + +
Sbjct: 155 ---------HFATALLLQSFEVEGCCM------VVNSLLNTLVKLDRV------------ 187
Query: 396 GQFREALTLLED-FHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 454
+A+ L ++ Q N + ++N +I +C + ALEL+ M P +V
Sbjct: 188 ---EDAMKLFDEHLRFQSCN-DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVT 243
Query: 455 YSTLISGFAKEQSNFEMVERLFTRLVKAG--ITFNTKTYTTLISIHGRTRKRHKAYCRFG 512
Y+TLI GF K + +F + VK+G + + TYT++IS + + K +A
Sbjct: 244 YNTLIQGFCK-SNELNKASEMF-KDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLD 301
Query: 513 EMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 572
+M++ + P V++ L+ + EM A + +M GC P++ T+T LIDG+C++
Sbjct: 302 DMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVG 361
Query: 573 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 625
+ +L++EM +G+FP+ TY++LI R+ + +L G++ + I+
Sbjct: 362 QVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELLGQLASKDII 414
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 130/299 (43%), Gaps = 10/299 (3%)
Query: 109 LLRDIVGYCKCDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVG 167
L+R + G K + + E + ++ +N LI+ F ++ L A ++F K+
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 168 L-ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLA 222
+ + + ++ ++ G P T+ +++ G++ A
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
Query: 223 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHG 282
EI GK+ G P VVT+ + I G C G V +L +++ + N+ ++ +I+
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 283 FCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPS 342
C + +A E+L ++ S P + YN +++ FCK G V + KP
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Query: 343 IVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREA 401
+ +T IL+ + +KG+ +++ +++ M+ P+ I + +L + G +EA
Sbjct: 452 KITFT--ILIIGHCMKGRMF--EAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 98/448 (21%), Positives = 197/448 (43%), Gaps = 22/448 (4%)
Query: 198 LMETGPLPNIHTYTIMMS--C--GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++ +G +P+ YT +++ C G++ A +++ K+ G VTY +RGLC G
Sbjct: 132 MVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGS 191
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
++ + + V +L K N+ ++ ++ + +EA+++L+E+ P++ SYN+
Sbjct: 192 LNQSLQFVERLMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNV 251
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLEVYN 371
LL FCK+G K ++V+Y L+ L C + ++++ +
Sbjct: 252 LLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGR------WEEANSLLA 305
Query: 372 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQG--INLNQYSYNEIIHMICK 429
M P+ + N ++ G+ +AL +L++ + + SYN +I +CK
Sbjct: 306 EMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCK 365
Query: 430 ESYPKMALELMPRMLKRNVLPGVVNYS---TLISGFAKEQSNFEMVERLFTRLVKAGITF 486
E + ++ + M+ R P Y+ +L +K Q F +++ L + F
Sbjct: 366 EGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDF 425
Query: 487 NTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALF 546
Y ++I+ R A+ EM + PD +Y+ALI C A +
Sbjct: 426 ----YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVL 481
Query: 547 QEMSRI-GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHK 605
M C P + + +I G CKI DLA ++F+ M K P+ TY +L+
Sbjct: 482 SIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAH 541
Query: 606 HGRIGEKNKLFGEMKANCILLDDGIKKL 633
+ ++ E++ ++ + + ++
Sbjct: 542 EDELELAKEVLDELRLRKVIGQNAVDRI 569
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 110/251 (43%), Gaps = 7/251 (2%)
Query: 372 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 431
S++ +PN +L C+ + ++A+ ++E GI + +Y +++ +CK
Sbjct: 96 SLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRG 155
Query: 432 YPKMALELMPRMLKRNVLPGVVNYSTLISGF---AKEQSNFEMVERLFTRLVKAGITFNT 488
A++L+ +M V Y+ L+ G + + VERL + G+ N
Sbjct: 156 NVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK----GLAPNA 211
Query: 489 KTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQE 548
TY+ L+ + R +A E+I P+ VSY L+ FC + A ALF+E
Sbjct: 212 FTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRE 271
Query: 549 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 608
+ G N+ +Y L+ C + A L EM P VVTY +LI HGR
Sbjct: 272 LPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGR 331
Query: 609 IGEKNKLFGEM 619
+ ++ EM
Sbjct: 332 TEQALQVLKEM 342
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 100/227 (44%), Gaps = 1/227 (0%)
Query: 395 EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 454
E ++ + LE G N ++++ +CK + K A+ ++ M+ ++P
Sbjct: 84 EPNLSDSFSHLESLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASA 143
Query: 455 YSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEM 514
Y+ L++ K + N +L ++ G NT TY L+ +++ +
Sbjct: 144 YTYLVNQLCK-RGNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERL 202
Query: 515 IQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 574
+Q L P+ +Y+ L+ R + A L E+ G PNL +Y L+ GFCK
Sbjct: 203 MQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRT 262
Query: 575 DLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 621
D A LF E+ KG +VV+Y +L+ GR E N L EM
Sbjct: 263 DDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDG 309
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 135/354 (38%), Gaps = 53/354 (14%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
+++ +NVL+ F + A +F G + ++ S N LL+CL
Sbjct: 245 NLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLL 304
Query: 196 XXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGN----PTVVTYGTYIRG 247
+ P++ TY I+++ G A ++L ++ S GN T +Y I
Sbjct: 305 AEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM--SKGNHQFRVTATSYNPVIAR 362
Query: 248 LCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGA-VNEALEVLEEMKSSRTFP 306
LC+ G VD+ K + ++ + N +NA I C+ + V EA +++ + + +
Sbjct: 363 LCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQKCC 421
Query: 307 DVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKS 366
Y ++ + C+KG+ C P Y++LI
Sbjct: 422 THDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALI---------------- 465
Query: 367 LEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHE-QGINLNQYSYNEIIH 425
R C EG F A+ +L E + ++N +I
Sbjct: 466 -----------------------RGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMIL 502
Query: 426 MICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRL 479
+CK +A+E+ M+++ +P Y+ L+ G A E E+ + + L
Sbjct: 503 GLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHED-ELELAKEVLDEL 555
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 140/286 (48%), Gaps = 4/286 (1%)
Query: 338 QIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQ 397
+ P ++ ++L + + + K++EV + M + + P+ + +L C+ G
Sbjct: 159 KTNPELIEPELFVVLMR-RFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGS 217
Query: 398 FREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYST 457
+EA + ED E+ N + +++ C+E A E++ +M + + P +V ++
Sbjct: 218 VKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTN 276
Query: 458 LISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCR-FGEMIQ 516
L+SG+A + + L + K G N YT LI RT KR R F EM +
Sbjct: 277 LLSGYAHAGKMADAYD-LMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMER 335
Query: 517 SCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDL 576
D V+YTALI+ FC ++ ++ +M + G +P+ TY ++ K + +
Sbjct: 336 YGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEE 395
Query: 577 ATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
+L ++MKR+G PD++ Y V+I K G + E +L+ EM+AN
Sbjct: 396 CLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 141/355 (39%), Gaps = 40/355 (11%)
Query: 271 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 330
+ F ++ F V +A+EVL+EM PD Y + LL+A CK G V
Sbjct: 165 IEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVK----- 219
Query: 331 XXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 390
++ +V+ M + PN +L
Sbjct: 220 ----------------------------------EASKVFEDM-REKFPPNLRYFTSLLY 244
Query: 391 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 450
CREG+ EA +L E G+ + + ++ A +LM M KR P
Sbjct: 245 GWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEP 304
Query: 451 GVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCR 510
V Y+ LI + + + R+F + + G + TYT LIS + K Y
Sbjct: 305 NVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSV 364
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
+M + + P +V+Y ++ + L ++M R GC P+L Y +I CK
Sbjct: 365 LDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACK 424
Query: 571 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 625
+ + A +L++EM+ G+ P V T+ ++I + G + E F EM + I
Sbjct: 425 LGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIF 479
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 170/409 (41%), Gaps = 44/409 (10%)
Query: 215 SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSH 274
S ++ A E+L ++ + G P +G + LC+ G V A K+ + K P N
Sbjct: 179 SANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPP-NLR 237
Query: 275 CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 334
F ++++G+C+ G + EA EVL +MK + PD+ + LL+ + G +
Sbjct: 238 YFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDM 297
Query: 335 XXCQIKPSIVNYTSLI-LLCKNKLKGQQ-------------------------------L 362
+P++ YT LI LC+ + + + +
Sbjct: 298 RKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGM 357
Query: 363 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 422
DK V + M + + P+ + I+ H ++ QF E L L+E +G + + YN
Sbjct: 358 IDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNV 417
Query: 423 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKA 482
+I + CK K A+ L M + PGV + +I+GF + E F +V
Sbjct: 418 VIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNH-FKEMVSR 476
Query: 483 GITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCL------CPDEVS-YTALIAVFCN 535
GI F+ Y TL S+ + K + + SC+ C VS +T I
Sbjct: 477 GI-FSAPQYGTLKSLLNNLVRDDK--LEMAKDVWSCISNKTSSCELNVSAWTIWIHALYA 533
Query: 536 IREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM 584
+ AC+ +M + +P TY L+ G K+ +A ++ +++
Sbjct: 534 KGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKV 582
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 115/244 (47%), Gaps = 4/244 (1%)
Query: 384 ICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS-YNEIIHMICKESYPKMALELMPR 442
+C ++ + + QF L+E+ + L + + ++ + K A+E++
Sbjct: 133 VCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDE 192
Query: 443 MLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTR 502
M K + P + L+ K S E ++F + + N + +T+L+ R
Sbjct: 193 MPKYGLEPDEYVFGCLLDALCKNGSVKE-ASKVFEDM-REKFPPNLRYFTSLLYGWCREG 250
Query: 503 KRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYT 562
K +A +M ++ L PD V +T L++ + + +M A L +M + G PN+ YT
Sbjct: 251 KLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYT 310
Query: 563 CLIDGFCKID-YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 621
LI C+ + +D A ++F EM+R G D+VTYT LI+ + K G I + + +M+
Sbjct: 311 VLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRK 370
Query: 622 NCIL 625
++
Sbjct: 371 KGVM 374
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 145/328 (44%), Gaps = 39/328 (11%)
Query: 274 HCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXX 333
+NA++ + + G ++A E+++ M+ PD+ S+N L+NA K G
Sbjct: 226 QVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGG---------- 275
Query: 334 XXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 393
+ P++ ++E+ + + + +RP+ I N +L
Sbjct: 276 -----LTPNL----------------------AVELLDMVRNSGLRPDAITYNTLLSACS 308
Query: 394 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 453
R+ A+ + ED + ++YN +I + + A L + + P V
Sbjct: 309 RDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAV 368
Query: 454 NYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE 513
Y++L+ FA+E+ N E V+ ++ ++ K G + TY T+I ++G+ + A + +
Sbjct: 369 TYNSLLYAFARER-NTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKD 427
Query: 514 MIQ-SCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 572
M S PD ++YT LI A AL EM +G P L TY+ LI G+ K
Sbjct: 428 MKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAG 487
Query: 573 YIDLATQLFDEMKRKGIFPDVVTYTVLI 600
+ A F M R G PD + Y+V++
Sbjct: 488 KREEAEDTFSCMLRSGTKPDNLAYSVML 515
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 124/251 (49%), Gaps = 10/251 (3%)
Query: 384 ICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES--YPKMALELMP 441
+ N ++ V+ R G+F +A L++ ++G + S+N +I+ K P +A+EL+
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 442 RMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRT 501
+ + P + Y+TL+S +++ SN + ++F + + TY +IS++GR
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRD-SNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRC 345
Query: 502 RKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTY 561
+A F E+ PD V+Y +L+ F R ++Q+M ++G + TY
Sbjct: 346 GLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTY 405
Query: 562 TCLIDGFCKIDYIDLATQLFDEMKR-KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
+I + K +DLA QL+ +MK G PD +TYTVLI K R E L EM
Sbjct: 406 NTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEM- 464
Query: 621 ANCILLDDGIK 631
LD GIK
Sbjct: 465 -----LDVGIK 470
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/380 (21%), Positives = 162/380 (42%), Gaps = 7/380 (1%)
Query: 222 AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIH 281
A ++G + +SG P + T+ + + +CG + A + + N ++H
Sbjct: 771 AESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLH 830
Query: 282 GFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKP 341
C G + E V+EE++ S ++L+AF + G++ P
Sbjct: 831 ALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLP 890
Query: 342 SIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFRE 400
+I Y +I LLCK G+++ D + V + M + + I N +L+++ +++
Sbjct: 891 TIRLYRMMIELLCK----GKRVRDAEIMV-SEMEEANFKVELAIWNSMLKMYTAIEDYKK 945
Query: 401 ALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 460
+ + + E G+ ++ +YN +I M C++ P+ LM +M + P + Y +LIS
Sbjct: 946 TVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLIS 1005
Query: 461 GFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLC 520
F K Q E E+LF L+ G+ + Y T++ I + KA M + +
Sbjct: 1006 AFGK-QKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIE 1064
Query: 521 PDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQL 580
P + L+ + + A + + Y+ +ID + + + +
Sbjct: 1065 PTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIER 1124
Query: 581 FDEMKRKGIFPDVVTYTVLI 600
EMK++G+ PD +T +
Sbjct: 1125 LLEMKKEGLEPDHRIWTCFV 1144
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/373 (20%), Positives = 151/373 (40%), Gaps = 41/373 (10%)
Query: 249 CECGYVDVAHKLVRKLHCK-LHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 307
C+ G+ + AH++V + K H S + +I + ++ +A V+ ++ S PD
Sbjct: 727 CKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPD 786
Query: 308 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSL 367
+ ++N L++A+ + G C Y+++
Sbjct: 787 LKTWNSLMSAYAQCG------------------------------C---------YERAR 807
Query: 368 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
++N+M+++ P N +L C +G+ E ++E+ + G +++ S ++
Sbjct: 808 AIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAF 867
Query: 428 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFN 487
+ ++ M LP + Y +I K + E + + + +A
Sbjct: 868 ARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGK-RVRDAEIMVSEMEEANFKVE 926
Query: 488 TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQ 547
+ +++ ++ K + + ++ L PDE +Y LI ++C R L Q
Sbjct: 927 LAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQ 986
Query: 548 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 607
+M +G P L TY LI F K ++ A QLF+E+ KG+ D Y ++ G
Sbjct: 987 QMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSG 1046
Query: 608 RIGEKNKLFGEMK 620
+ KL MK
Sbjct: 1047 SDSKAEKLLQMMK 1059
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/377 (19%), Positives = 156/377 (41%), Gaps = 19/377 (5%)
Query: 198 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
L ++G P++ T+ +MS CG A I + R G +PTV + + LC G
Sbjct: 778 LRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGR 837
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
++ + +V +L ++ ++ F + G + E ++ MK++ P + Y M
Sbjct: 838 LEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRM 897
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
++ CK V K + + S++ + + Y K+++VY +
Sbjct: 898 MIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKM----YTAIEDYKKTVQVYQRI 953
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
+ + P+ N ++ ++CR+ + E L++ G++ +Y +I K+
Sbjct: 954 KETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCL 1013
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTT 493
+ A +L +L + + Y T++ +++ + E+L + AGI T
Sbjct: 1014 EQAEQLFEELLSKGLKLDRSFYHTMMK-ISRDSGSDSKAEKLLQMMKNAGIEPTLATMHL 1072
Query: 494 LISIHGRTRKRHKAYCRFGEMIQSCLCPDEVS-----YTALIAVFCNIREMNVACALFQE 548
L+ + + +A E + S L EV Y+++I + ++ N E
Sbjct: 1073 LMVSYSSSGNPQEA-----EKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLE 1127
Query: 549 MSRIGCLPNLYTYTCLI 565
M + G P+ +TC +
Sbjct: 1128 MKKEGLEPDHRIWTCFV 1144
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/485 (21%), Positives = 179/485 (36%), Gaps = 74/485 (15%)
Query: 137 VLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXX 196
V V+N ++ V++ + A ++ + + G + S N L+
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINA--------------- 269
Query: 197 XLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDV 256
L G PN LA E+L + SG P +TY T + +D
Sbjct: 270 RLKSGGLTPN--------------LAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDG 315
Query: 257 AHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLN 316
A K+ + + +NA+I + + G EA + E++ FPD +YN LL
Sbjct: 316 AVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLY 375
Query: 317 AFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQN 376
AF ++ + +K EVY M +
Sbjct: 376 AFARERNT---------------------------------------EKVKEVYQQMQKM 396
Query: 377 AIRPNTIICNHILRVHCREGQFREALTLLEDFHE-QGINLNQYSYNEIIHMICKESYPKM 435
+ + N I+ ++ ++GQ AL L +D G N + +Y +I + K +
Sbjct: 397 GFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVE 456
Query: 436 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
A LM ML + P + YS LI G+AK E E F+ ++++G + Y+ ++
Sbjct: 457 AAALMSEMLDVGIKPTLQTYSALICGYAK-AGKREEAEDTFSCMLRSGTKPDNLAYSVML 515
Query: 496 SIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCL 555
+ R + KA+ + +MI P Y +I + ++M + +
Sbjct: 516 DVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGM 575
Query: 556 PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL 615
L + L+ G C DLA + G + T ++ Y GR E +L
Sbjct: 576 NPLEISSVLVKGEC----FDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFEL 631
Query: 616 FGEMK 620
+K
Sbjct: 632 LEFLK 636
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 114/661 (17%), Positives = 231/661 (34%), Gaps = 108/661 (16%)
Query: 63 SLNWKIARE------KKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGY 116
SL + ARE K+ ++ GF + IIH + G L +D+ G
Sbjct: 372 SLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKG- 430
Query: 117 CKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCN 176
L + + + VLI + A + +VG++ +++ +
Sbjct: 431 -------------LSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYS 477
Query: 177 FLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRS 232
L+ ++ +G P+ Y++M+ + R A + +
Sbjct: 478 ALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISD 537
Query: 233 GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH--CKLHPLN-------SHCFN------ 277
G P+ Y I GL + D K +R + C ++PL CF+
Sbjct: 538 GHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQL 597
Query: 278 ----------------AVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
+++ + G +EA E+LE +K + L+ CK
Sbjct: 598 KVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKV 657
Query: 322 GDVXXXXXXXXXXXXCQIK--PSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIR 379
++ S Y +L+ C + Y ++ +V++ + +
Sbjct: 658 NNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCV----ANEHYAEASQVFSDLRLSGCE 713
Query: 380 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLN-QYSYNEIIHMICKESYPKMALE 438
+ +C ++ V+C+ G A ++ +G + Y +II K+ + A
Sbjct: 714 ASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAES 773
Query: 439 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLIS-- 496
++ + + P + +++L+S +A + +E +F +++ G + ++ L+
Sbjct: 774 VVGNLRQSGRTPDLKTWNSLMSAYA-QCGCYERARAIFNTMMRDGPSPTVESINILLHAL 832
Query: 497 -IHGRTRKRH----------------------KAYCRFG----------EMIQSCLCPDE 523
+ GR + + A+ R G M + P
Sbjct: 833 CVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTI 892
Query: 524 VSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE 583
Y +I + C + + A + EM L + ++ + I+ Q++
Sbjct: 893 RLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQR 952
Query: 584 MKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKLQDPKLVQFKN 643
+K G+ PD TY LI Y + R E L +M+ N L DPKL +K+
Sbjct: 953 IKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR-NLGL---------DPKLDTYKS 1002
Query: 644 V 644
+
Sbjct: 1003 L 1003
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/461 (22%), Positives = 197/461 (42%), Gaps = 49/461 (10%)
Query: 198 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++E G ++ +Y+I++ G++ A +LGK+ + G P ++TY IRGLC+ G
Sbjct: 268 MVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGK 327
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
++ A L ++ ++ + +I G C++G +N A +L +M+ P + +YN
Sbjct: 328 LEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNT 387
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
++N C G V + ++ Y++L+ + +K Q + D LE+
Sbjct: 388 VINGLCMAGRVSEADEVSK-----GVVGDVITYSTLL---DSYIKVQNI-DAVLEIRRRF 438
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
L+ I + ++CN +L+ G + EA L E + + +Y +I CK
Sbjct: 439 LEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQI 498
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTT 493
+ ALE+ + K +V V Y+ +I K + + + L + G+ + T T
Sbjct: 499 EEALEMFNELRKSSV-SAAVCYNRIIDALCK-KGMLDTATEVLIELWEKGLYLDIHTSRT 556
Query: 494 LI-SIHGRTRKRHKAYCRFG-EMIQSCLC----PDEV-------SYTALIAVFC------ 534
L+ SIH + +G E + S +C D + S+ A I V+
Sbjct: 557 LLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKG 616
Query: 535 ---------------NIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 579
N+R ++ + ++ YT +I+G CK ++ A
Sbjct: 617 LTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALN 676
Query: 580 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
L K +G+ + +TY LI + G + E +LF ++
Sbjct: 677 LCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLE 717
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 129/550 (23%), Positives = 231/550 (42%), Gaps = 74/550 (13%)
Query: 78 VETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSV 137
+E G S+ + +I+ MAG E + + +VG +STLLD
Sbjct: 373 MEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVG------DVITYSTLLD------ 420
Query: 138 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 197
IKV +++LE + F+ AK + + + CN LLK
Sbjct: 421 ----SYIKVQNIDAVLE-IRRRFLEAK---IPMDLVMCNILLK----------------- 455
Query: 198 LMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 257
+ +M + G+ A + + P TY T I+G C+ G ++ A
Sbjct: 456 -----------AFLLMGAYGE---ADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEA 501
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
++ +L K + C+N +I C++G ++ A EVL E+ + D+++ LL++
Sbjct: 502 LEMFNELR-KSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHS 560
Query: 318 F-CKKGDVXXXXXX-XXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQ 375
GD + ++N +++LLCK +G ++ ++EVY M +
Sbjct: 561 IHANGGDKGILGLVYGLEQLNSDVCLGMLN-DAILLLCK---RGS--FEAAIEVYMIMRR 614
Query: 376 NAIR---PNTIICNHILRVHCREGQFREALTLLEDFHEQGIN-LNQYSYNEIIHMICKES 431
+ P+TI L+ + +A L+ + E ++ ++ Y II+ +CKE
Sbjct: 615 KGLTVTFPSTI-----LKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEG 669
Query: 432 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
+ AL L R V + Y++LI+G ++ E + RLF L G+ + TY
Sbjct: 670 FLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEAL-RLFDSLENIGLVPSEVTY 728
Query: 492 TTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQE--M 549
LI + A M+ L P+ + Y +++ +C + + A + M
Sbjct: 729 GILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMM 788
Query: 550 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
R+ P+ +T + +I G+CK ++ A +F E K K I D + LI + GR+
Sbjct: 789 GRV--TPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRM 846
Query: 610 GEKNKLFGEM 619
E L EM
Sbjct: 847 EEARGLLREM 856
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 95/429 (22%), Positives = 187/429 (43%), Gaps = 51/429 (11%)
Query: 217 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 276
G++ A +LG + + G P+++TY T I GLC G V A ++ + + + +
Sbjct: 361 GNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVIT-----Y 415
Query: 277 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 336
+ ++ + + ++ LE+ ++ D+ N+LL AF G
Sbjct: 416 STLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPE 475
Query: 337 CQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIIC-NHILRVHCRE 395
+ P Y ++I K K Q+ +++LE++N + ++++ + +C N I+ C++
Sbjct: 476 MDLTPDTATYATMI---KGYCKTGQI-EEALEMFNELRKSSV--SAAVCYNRIIDALCKK 529
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRM--LKRNVLPGVV 453
G A +L + E+G+ L+ ++ ++H I K L L+ + L +V G++
Sbjct: 530 GMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGML 589
Query: 454 NYSTLISGFAKEQSNFEMVERLFTRLVKAG--ITFNTKTYTTLISI------------HG 499
N + L+ ++ +FE ++ + + G +TF + TL+ G
Sbjct: 590 NDAILL---LCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAG 646
Query: 500 RTRKRH----------KAYCRFGEMIQSC-LCP---------DEVSYTALIAVFCNIREM 539
T C+ G ++++ LC + ++Y +LI C +
Sbjct: 647 ETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCL 706
Query: 540 NVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 599
A LF + IG +P+ TY LID CK A +L D M KG+ P+++ Y +
Sbjct: 707 VEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSI 766
Query: 600 IAWYHKHGR 608
+ Y K G+
Sbjct: 767 VDGYCKLGQ 775
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 163/370 (44%), Gaps = 53/370 (14%)
Query: 273 SHCFNAVIHGFC-QRGAVNEALEVLEE-MKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 330
+H +++IHGF R ++ L +L + +++ FP ++ L+ F +KG++
Sbjct: 97 THMLDSLIHGFSITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEM------ 150
Query: 331 XXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML-QNAIRP-NTIICNHI 388
D ++EV M +N P + +C+ +
Sbjct: 151 ---------------------------------DNAIEVLEMMTNKNVNYPFDNFVCSAV 177
Query: 389 LRVHCREGQFREALTLLEDFHEQGINL-NQYSYNEIIHMICKESYPKMALELMPRMLKRN 447
+ C+ G+ AL E + G+ + N +Y ++ +C+ +L+ R+
Sbjct: 178 ISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEG 237
Query: 448 VLPGVVNYSTLISGFAKEQSNFEMVERLFT--RLVKAGITFNTKTYTTLISIHGRTRKRH 505
V YS I G+ K + +V+ L +V+ G+ + +Y+ LI +
Sbjct: 238 FEFDCVFYSNWIHGYFKGGA---LVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVE 294
Query: 506 KAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLI 565
+A G+MI+ + P+ ++YTA+I C + ++ A LF + +G + + Y LI
Sbjct: 295 EALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLI 354
Query: 566 DGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNK----LFGEMKA 621
DG C+ ++ A + +M+++GI P ++TY +I GR+ E ++ + G++
Sbjct: 355 DGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVIT 414
Query: 622 NCILLDDGIK 631
LLD IK
Sbjct: 415 YSTLLDSYIK 424
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 168/421 (39%), Gaps = 63/421 (14%)
Query: 92 IIIHTFAMAGMHLEVFALLRD----------------IVGYCKC---DDSFEQFSTLLDL 132
I++ F + G + E AL R I GYCK +++ E F+ L
Sbjct: 452 ILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKS 511
Query: 133 PHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXX 192
+ + +N +I ML+ A +V + GL L I + LL +
Sbjct: 512 SVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGIL 571
Query: 193 XXXXXL--METGPLPNIHTYTIMMSC--GDIRLAAEILGKIYRSG--------------- 233
L + + + I++ C G A E+ + R G
Sbjct: 572 GLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVD 631
Query: 234 --------------GNPT-----VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSH 274
G T V+ Y I GLC+ G++ A L + LN+
Sbjct: 632 NLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTI 691
Query: 275 CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 334
+N++I+G CQ+G + EAL + + +++ P +Y +L++ CK+G
Sbjct: 692 TYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSM 751
Query: 335 XXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 393
+ P+I+ Y S++ CK GQ + ++ V + + + P+ + +++ +C
Sbjct: 752 VSKGLVPNIIIYNSIVDGYCK---LGQT--EDAMRVVSRKMMGRVTPDAFTVSSMIKGYC 806
Query: 394 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 453
++G EAL++ +F ++ I+ + + + +I C + + A L+ ML + ++
Sbjct: 807 KKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLI 866
Query: 454 N 454
N
Sbjct: 867 N 867
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 91/210 (43%), Gaps = 11/210 (5%)
Query: 236 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 295
P+ VTYG I LC+ G A KL+ + K N +N+++ G+C+ G +A+ V
Sbjct: 723 PSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRV 782
Query: 296 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLC 353
+ R PD ++ + ++ +CKKGD+ I + LI
Sbjct: 783 VSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCT 842
Query: 354 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNH-----ILRVHCREGQFREALTLLED- 407
K +++ + + + V S+++ R + + L C +G+ +A+ +L++
Sbjct: 843 KGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDEI 902
Query: 408 ---FHEQGINLNQYSYNEIIHMICKESYPK 434
+ G NL Y + ++ + +E K
Sbjct: 903 SSTIYPSGKNLGSYQRLQFLNDVNEEEIKK 932
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 115/547 (21%), Positives = 216/547 (39%), Gaps = 26/547 (4%)
Query: 81 HGFSHSVNYFRIIIHTFAMAGMH----LEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHS 136
H +S + Y + I M M L + ++ D+ G K S+ + +LD
Sbjct: 218 HAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFG--KMGRSWRKILGVLDEMRSK 275
Query: 137 VLVFN-----VLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXX 191
L F+ ++ A +L A + F K+ G E + N LL+
Sbjct: 276 GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEA 335
Query: 192 XXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRG 247
+ E + TY +++ G + AA ++ + + G P +TY T I
Sbjct: 336 LSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDA 395
Query: 248 LCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 307
+ G D A KL + N+ +NAV+ ++ NE +++L +MKS+ P+
Sbjct: 396 YGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPN 455
Query: 308 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL---CKNKLKGQQLYD 364
++N +L KG C +P + +LI C +++ ++Y
Sbjct: 456 RATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYG 515
Query: 365 KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEII 424
+ M + N +L R+G +R ++ D +G + SY+ ++
Sbjct: 516 E-------MTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML 568
Query: 425 HMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGI 484
K + R+ + + P + TL+ K ++ ER FT K G
Sbjct: 569 QCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRA-LAGSERAFTLFKKHGY 627
Query: 485 TFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACA 544
+ + +++SI R +A + + L PD V+Y +L+ ++ E A
Sbjct: 628 KPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEE 687
Query: 545 LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYH 604
+ + + + P+L +Y +I GFC+ + A ++ EM +GI P + TY ++ Y
Sbjct: 688 ILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYT 747
Query: 605 KHGRIGE 611
G E
Sbjct: 748 AMGMFAE 754
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 111/237 (46%), Gaps = 1/237 (0%)
Query: 389 LRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV 448
+R+ RE Q+ A LL+ Q L+ +Y I+H + + A++L RM +
Sbjct: 182 VRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGP 241
Query: 449 LPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAY 508
P +V Y+ ++ F K ++ + + + G+ F+ T +T++S R +A
Sbjct: 242 SPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAK 301
Query: 509 CRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGF 568
F E+ P V+Y AL+ VF A ++ +EM C + TY L+ +
Sbjct: 302 EFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAY 361
Query: 569 CKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK-ANCI 624
+ + A + + M +KG+ P+ +TYT +I Y K G+ E KLF MK A C+
Sbjct: 362 VRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCV 418
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 4/237 (1%)
Query: 388 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK--ESYPKMALELMPRMLK 445
IL + R G++ +A+ L E E G + +YN I+ + K S+ K+ L ++ M
Sbjct: 216 ILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKI-LGVLDEMRS 274
Query: 446 RNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRH 505
+ + ST++S A+E E E F L G T TY L+ + G+
Sbjct: 275 KGLKFDEFTCSTVLSACAREGLLREAKE-FFAELKSCGYEPGTVTYNALLQVFGKAGVYT 333
Query: 506 KAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLI 565
+A EM ++ D V+Y L+A + A + + M++ G +PN TYT +I
Sbjct: 334 EALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVI 393
Query: 566 DGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
D + K D A +LF MK G P+ TY +++ K R E K+ +MK+N
Sbjct: 394 DAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSN 450
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 156/362 (43%), Gaps = 46/362 (12%)
Query: 237 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL 296
T Y ++ ECG +L+ ++ +P + FN +I C G A +V+
Sbjct: 151 TANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVV 207
Query: 297 EEMKSSRTF---PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLC 353
E+ S+TF P +SYN +L++
Sbjct: 208 EQFIKSKTFNYRPYKHSYNAILHS------------------------------------ 231
Query: 354 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 413
L G + Y VY ML++ P+ + N ++ + R G+ LL++ + G
Sbjct: 232 ---LLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGF 288
Query: 414 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 473
+ + Y+YN ++H + + P AL L+ M + V PGV++++TLI G ++ E +
Sbjct: 289 SPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSR-AGKLEACK 347
Query: 474 RLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVF 533
VK G T + YT +I+ + + KA F EM + P+ +Y ++I F
Sbjct: 348 YFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGF 407
Query: 534 CNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 593
C + ACAL +EM GC PN Y+ L++ + A ++ +M KG + +
Sbjct: 408 CMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHYVHL 467
Query: 594 VT 595
++
Sbjct: 468 IS 469
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 111/242 (45%), Gaps = 8/242 (3%)
Query: 382 TIICNHIL-RVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
T C H+L ++ G+++ L+++ + G ++N +IC +A +++
Sbjct: 151 TANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFN---LLICTCGEAGLARDVV 207
Query: 441 PRMLKR---NVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISI 497
+ +K N P +Y+ ++ + +++++ ++ ++++ G T + TY ++
Sbjct: 208 EQFIKSKTFNYRPYKHSYNAILHSLLGVK-QYKLIDWVYEQMLEDGFTPDVLTYNIVMFA 266
Query: 498 HGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPN 557
+ R K + Y EM++ PD +Y L+ + A L M +G P
Sbjct: 267 NFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPG 326
Query: 558 LYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFG 617
+ +T LIDG + ++ DE + G PDVV YTV+I Y G + + ++F
Sbjct: 327 VIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFK 386
Query: 618 EM 619
EM
Sbjct: 387 EM 388
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 114/291 (39%), Gaps = 53/291 (18%)
Query: 212 IMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPL 271
I CG+ + ++ ++ + G T T+ I C CG +A +V + K
Sbjct: 161 IFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQF-IKSKTF 216
Query: 272 N----SHCFNAVIH---------------------GFC--------------QRGAVNEA 292
N H +NA++H GF + G +
Sbjct: 217 NYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRL 276
Query: 293 LEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-- 350
+L+EM PD+Y+YN+LL+ ++P ++++T+LI
Sbjct: 277 YRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDG 336
Query: 351 LLCKNKLKGQQLY-DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFH 409
L KL+ + + D++++V P+ + ++ + G+ +A + ++
Sbjct: 337 LSRAGKLEACKYFMDETVKV-------GCTPDVVCYTVMITGYISGGELEKAEEMFKEMT 389
Query: 410 EQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 460
E+G N ++YN +I C K A L+ M R P V YSTL++
Sbjct: 390 EKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVN 440
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 90/224 (40%), Gaps = 9/224 (4%)
Query: 108 ALLRDIVG---YCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAK 164
A+L ++G Y D +EQ L D VL +N+++ + +++
Sbjct: 227 AILHSLLGVKQYKLIDWVYEQM--LEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMV 284
Query: 165 NVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIR 220
G + + N LL L + E G P + +T ++ G +
Sbjct: 285 KDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLE 344
Query: 221 LAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVI 280
+ + + G P VV Y I G G ++ A ++ +++ K N +N++I
Sbjct: 345 ACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMI 404
Query: 281 HGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDV 324
GFC G EA +L+EM+S P+ Y+ L+N G V
Sbjct: 405 RGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKV 448
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 97/238 (40%), Gaps = 23/238 (9%)
Query: 70 REKKFGSWVETH----GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQ 125
++ K WV GF+ V + I++ G ++ LL ++V D F
Sbjct: 236 KQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMV-----KDGFSP 290
Query: 126 FSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXX 185
+ +N+L+ A+ + A + + VG+E + L+ L
Sbjct: 291 ----------DLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRA 340
Query: 186 XXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTY 241
++ G P++ YT+M+ S G++ A E+ ++ G P V TY
Sbjct: 341 GKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTY 400
Query: 242 GTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 299
+ IRG C G A L++++ + N ++ +++ G V EA EV+++M
Sbjct: 401 NSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDM 458
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 135/306 (44%), Gaps = 12/306 (3%)
Query: 306 PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDK 365
P++++ N+L+ A CKK D+ + P++V YT+++ + +
Sbjct: 189 PNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTIL----GGYVARGDMES 244
Query: 366 SLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIH 425
+ V ML P+ ++ +C+ G+F EA T+++D + I N+ +Y +I
Sbjct: 245 AKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR 304
Query: 426 MICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGIT 485
+CKE A + ML+R+ +P +I ++ E L+ +++K
Sbjct: 305 ALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEAC-GLWRKMLKNNCM 363
Query: 486 FNTKTYTTLISI---HGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVA 542
+ +TLI GR + K + F + P ++Y LIA C E+ A
Sbjct: 364 PDNALLSTLIHWLCKEGRVTEARKLFDEF----EKGSIPSLLTYNTLIAGMCEKGELTEA 419
Query: 543 CALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAW 602
L+ +M C PN +TY LI+G K + ++ +EM G FP+ T+ +L
Sbjct: 420 GRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEG 479
Query: 603 YHKHGR 608
K G+
Sbjct: 480 LQKLGK 485
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/499 (21%), Positives = 192/499 (38%), Gaps = 102/499 (20%)
Query: 82 GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGY---CKCDDSFEQFSTLLDLPHHSVL 138
GF+H+ + + I+ + A V +L+ D+ KC ++
Sbjct: 78 GFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGEN---------------- 121
Query: 139 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 198
+F L++ + E + ++F+ + G++ +RS N LL L
Sbjct: 122 LFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNS 181
Query: 199 MET-GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
E+ G PNI T +++ DI A ++L +I G P +VTY T
Sbjct: 182 KESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTT---------- 231
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
++ G+ RG + A VLEEM +PD +Y +
Sbjct: 232 -------------------------ILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTV 266
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNS 372
L++ +CK G +I+P+ V Y +I LCK K G+ + +++
Sbjct: 267 LMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGE-----ARNMFDE 321
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
ML+ + P++ +C ++ C + + EA L + + + +IH +CKE
Sbjct: 322 MLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGR 381
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
A +L ++ +P ++ Y+TLI+G M E+ L +AG ++
Sbjct: 382 VTEARKLFDE-FEKGSIPSLLTYNTLIAG---------MCEK--GELTEAGRLWD----- 424
Query: 493 TLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI 552
+M + P+ +Y LI + + +EM I
Sbjct: 425 --------------------DMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEI 464
Query: 553 GCLPNLYTYTCLIDGFCKI 571
GC PN T+ L +G K+
Sbjct: 465 GCFPNKTTFLILFEGLQKL 483
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 123/305 (40%), Gaps = 43/305 (14%)
Query: 371 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 430
NS I PN CN +++ C++ A +L++ G+ N +Y I+
Sbjct: 180 NSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVAR 239
Query: 431 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKT 490
+ A ++ ML R P Y+ L+ G+ K F + + K I N T
Sbjct: 240 GDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCK-LGRFSEAATVMDDMEKNEIEPNEVT 298
Query: 491 YTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMS 550
Y +I + +K +A F EM++ PD +I C +++ AC L+++M
Sbjct: 299 YGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKML 358
Query: 551 RIGCLPN----------------------------------LYTYTCLIDGFCKIDYIDL 576
+ C+P+ L TY LI G C+ +
Sbjct: 359 KNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGELTE 418
Query: 577 ATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM--------KANCILLDD 628
A +L+D+M + P+ TY VLI K+G + E ++ EM K ++L +
Sbjct: 419 AGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFE 478
Query: 629 GIKKL 633
G++KL
Sbjct: 479 GLQKL 483
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 126/263 (47%), Gaps = 2/263 (0%)
Query: 363 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ-GINLNQYSYN 421
Y+ S+ ++ + ++ + N +L V + +F + ++ E GI N ++ N
Sbjct: 136 YESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCN 195
Query: 422 EIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVK 481
++ +CK++ + A +++ + ++P +V Y+T++ G+ + + E +R+ ++
Sbjct: 196 LLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVA-RGDMESAKRVLEEMLD 254
Query: 482 AGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNV 541
G + TYT L+ + + + +A +M ++ + P+EV+Y +I C ++
Sbjct: 255 RGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGE 314
Query: 542 ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 601
A +F EM +P+ +ID C+ +D A L+ +M + PD + LI
Sbjct: 315 ARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIH 374
Query: 602 WYHKHGRIGEKNKLFGEMKANCI 624
W K GR+ E KLF E + I
Sbjct: 375 WLCKEGRVTEARKLFDEFEKGSI 397
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 87/180 (48%), Gaps = 2/180 (1%)
Query: 452 VVNYSTLISGFAKEQSNFEMVERLFTRLVKA-GITFNTKTYTTLISIHGRTRKRHKAYCR 510
V + +TL++ + Q F++V +F ++ GIT N T L+ + AY
Sbjct: 155 VRSLNTLLNVLIQNQ-RFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKV 213
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
E+ L P+ V+YT ++ + +M A + +EM G P+ TYT L+DG+CK
Sbjct: 214 LDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCK 273
Query: 571 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 630
+ A + D+M++ I P+ VTY V+I K + GE +F EM + D +
Sbjct: 274 LGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSL 333
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%)
Query: 230 YRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAV 289
+ G P+++TY T I G+CE G + A +L ++ + N+ +N +I G + G V
Sbjct: 392 FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNV 451
Query: 290 NEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKG 322
E + VLEEM FP+ ++ +L K G
Sbjct: 452 KEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLG 484
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 7/308 (2%)
Query: 216 CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHC 275
G+ A I ++ G + + LC+ V+ A ++ +L + P N+H
Sbjct: 168 AGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITP-NAHT 226
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
FN IHG+C+ V EAL ++EMK P V SY ++ +C++ +
Sbjct: 227 FNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEME 286
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
P+ + YT+++ + L Q+ ++++L V M ++ +P+++ N ++ R
Sbjct: 287 ANGSPPNSITYTTIM----SSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARA 342
Query: 396 GQFREALTLLE-DFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL-PGVV 453
G+ EA + + E G+++N +YN +I M C A+EL+ M N+ P V
Sbjct: 343 GRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVH 402
Query: 454 NYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE 513
Y L+ K E+ + L + K ++ + TYT LI R AYC F E
Sbjct: 403 TYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEE 462
Query: 514 MIQSCLCP 521
MI + P
Sbjct: 463 MISQDITP 470
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 122/266 (45%), Gaps = 4/266 (1%)
Query: 356 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 415
+ G +++++ +++ + + + NT N +L C+E + +A +L I
Sbjct: 164 RFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITP 222
Query: 416 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 475
N +++N IH CK + + AL + M P V++Y+T+I + +Q F V +
Sbjct: 223 NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYC-QQFEFIKVYEM 281
Query: 476 FTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCN 535
+ + G N+ TYTT++S ++ +A M +S PD + Y LI
Sbjct: 282 LSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLAR 341
Query: 536 IREMNVACALFQ-EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI-FPDV 593
+ A +F+ EM +G N TY +I +C D D A +L EM+ + PDV
Sbjct: 342 AGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDV 401
Query: 594 VTYTVLIAWYHKHGRIGEKNKLFGEM 619
TY L+ K G + E KL EM
Sbjct: 402 HTYQPLLRSCFKRGDVVEVGKLLKEM 427
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 157/386 (40%), Gaps = 56/386 (14%)
Query: 221 LAAEILGK----------IYRSGGNP--TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKL 268
+A +ILGK + R G+ T+ T +R G + A + +L
Sbjct: 126 MAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFG 185
Query: 269 HPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXX 328
N+ N ++ C+ V +A VL ++KS T P+ +++N+ ++ +CK V
Sbjct: 186 LEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHIT-PNAHTFNIFIHGWCKANRV---- 240
Query: 329 XXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHI 388
+++L M + RP I I
Sbjct: 241 -----------------------------------EEALWTIQEMKGHGFRPCVISYTTI 265
Query: 389 LRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV 448
+R +C++ +F + +L + G N +Y I+ + + + AL + RM +
Sbjct: 266 IRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGC 325
Query: 449 LPGVVNYSTLISGFAKEQSNFEMVERLF-TRLVKAGITFNTKTYTTLISIHGRTRKRHKA 507
P + Y+ LI A+ E ER+F + + G++ NT TY ++I+++ + KA
Sbjct: 326 KPDSLFYNCLIHTLAR-AGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKA 384
Query: 508 YCRFGEMIQSCLC-PDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLP-NLYTYTCLI 565
EM S LC PD +Y L+ ++ L +EM L + TYT LI
Sbjct: 385 IELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLI 444
Query: 566 DGFCKIDYIDLATQLFDEMKRKGIFP 591
C+ + + A LF+EM + I P
Sbjct: 445 QRLCRANMCEWAYCLFEEMISQDITP 470
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 110/238 (46%), Gaps = 7/238 (2%)
Query: 388 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 447
I+R G++ EA+ + + E G+ N S N ++ +CKE + A ++ + LK +
Sbjct: 161 IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LKSH 219
Query: 448 VLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFN--TKTYTTLISIHGRTRKRH 505
+ P ++ I G+ K + E L+T G F +YTT+I + + +
Sbjct: 220 ITPNAHTFNIFIHGWCKAN---RVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 506 KAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLI 565
K Y EM + P+ ++YT +++ +E A + M R GC P+ Y CLI
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 566 DGFCKIDYIDLATQLFD-EMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
+ ++ A ++F EM G+ + TY +IA Y H + +L EM+++
Sbjct: 337 HTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESS 394
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 139/308 (45%), Gaps = 7/308 (2%)
Query: 216 CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHC 275
G+ A I ++ G + + LC+ V+ A ++ +L + P N+H
Sbjct: 168 AGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITP-NAHT 226
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
FN IHG+C+ V EAL ++EMK P V SY ++ +C++ +
Sbjct: 227 FNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEME 286
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
P+ + YT+++ + L Q+ ++++L V M ++ +P+++ N ++ R
Sbjct: 287 ANGSPPNSITYTTIM----SSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARA 342
Query: 396 GQFREALTLLE-DFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL-PGVV 453
G+ EA + + E G+++N +YN +I M C A+EL+ M N+ P V
Sbjct: 343 GRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVH 402
Query: 454 NYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE 513
Y L+ K E+ + L + K ++ + TYT LI R AYC F E
Sbjct: 403 TYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCRANMCEWAYCLFEE 462
Query: 514 MIQSCLCP 521
MI + P
Sbjct: 463 MISQDITP 470
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 122/266 (45%), Gaps = 4/266 (1%)
Query: 356 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 415
+ G +++++ +++ + + + NT N +L C+E + +A +L I
Sbjct: 164 RFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITP 222
Query: 416 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 475
N +++N IH CK + + AL + M P V++Y+T+I + +Q F V +
Sbjct: 223 NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYC-QQFEFIKVYEM 281
Query: 476 FTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCN 535
+ + G N+ TYTT++S ++ +A M +S PD + Y LI
Sbjct: 282 LSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLAR 341
Query: 536 IREMNVACALFQ-EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI-FPDV 593
+ A +F+ EM +G N TY +I +C D D A +L EM+ + PDV
Sbjct: 342 AGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDV 401
Query: 594 VTYTVLIAWYHKHGRIGEKNKLFGEM 619
TY L+ K G + E KL EM
Sbjct: 402 HTYQPLLRSCFKRGDVVEVGKLLKEM 427
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 157/386 (40%), Gaps = 56/386 (14%)
Query: 221 LAAEILGK----------IYRSGGNP--TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKL 268
+A +ILGK + R G+ T+ T +R G + A + +L
Sbjct: 126 MAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFG 185
Query: 269 HPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXX 328
N+ N ++ C+ V +A VL ++KS T P+ +++N+ ++ +CK V
Sbjct: 186 LEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHIT-PNAHTFNIFIHGWCKANRV---- 240
Query: 329 XXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHI 388
+++L M + RP I I
Sbjct: 241 -----------------------------------EEALWTIQEMKGHGFRPCVISYTTI 265
Query: 389 LRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV 448
+R +C++ +F + +L + G N +Y I+ + + + AL + RM +
Sbjct: 266 IRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGC 325
Query: 449 LPGVVNYSTLISGFAKEQSNFEMVERLF-TRLVKAGITFNTKTYTTLISIHGRTRKRHKA 507
P + Y+ LI A+ E ER+F + + G++ NT TY ++I+++ + KA
Sbjct: 326 KPDSLFYNCLIHTLAR-AGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKA 384
Query: 508 YCRFGEMIQSCLC-PDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLP-NLYTYTCLI 565
EM S LC PD +Y L+ ++ L +EM L + TYT LI
Sbjct: 385 IELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLI 444
Query: 566 DGFCKIDYIDLATQLFDEMKRKGIFP 591
C+ + + A LF+EM + I P
Sbjct: 445 QRLCRANMCEWAYCLFEEMISQDITP 470
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 110/238 (46%), Gaps = 7/238 (2%)
Query: 388 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 447
I+R G++ EA+ + + E G+ N S N ++ +CKE + A ++ + LK +
Sbjct: 161 IMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQ-LKSH 219
Query: 448 VLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFN--TKTYTTLISIHGRTRKRH 505
+ P ++ I G+ K + E L+T G F +YTT+I + + +
Sbjct: 220 ITPNAHTFNIFIHGWCKAN---RVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFI 276
Query: 506 KAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLI 565
K Y EM + P+ ++YT +++ +E A + M R GC P+ Y CLI
Sbjct: 277 KVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLI 336
Query: 566 DGFCKIDYIDLATQLFD-EMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
+ ++ A ++F EM G+ + TY +IA Y H + +L EM+++
Sbjct: 337 HTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESS 394
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/383 (24%), Positives = 172/383 (44%), Gaps = 17/383 (4%)
Query: 260 LVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 319
+VR L K +++ N ++ C+ + A +L + PDV +YN L+ +
Sbjct: 1 MVRGL-MKFPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYT 59
Query: 320 KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIR 379
+ + I+P + Y SLI L + ++ L++++ ML + +
Sbjct: 60 RFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNL----MLNRVLQLFDEMLHSGLS 115
Query: 380 PNTIICNHILRVHCREGQFREALTLL-EDFHEQGINLNQYSYNEIIHMICKESYPKMALE 438
P+ N ++ + + G+ EA +L ED H G+ +YN ++ +CK + A+E
Sbjct: 116 PDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIE 175
Query: 439 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIH 498
L + LK V P ++ Y+ LI+G K + V+ + L K+G T N TYTT++ ++
Sbjct: 176 LF-KHLKSRVKPELMTYNILINGLCKSR-RVGSVDWMMRELKKSGYTPNAVTYTTMLKMY 233
Query: 499 GRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLP-N 557
+T++ K F +M + D + A+++ A E+ R G +
Sbjct: 234 FKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQD 293
Query: 558 LYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNK--- 614
+ +Y L++ + K +D L +E++ KG+ PD T+T+++ G G K
Sbjct: 294 IVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLA 353
Query: 615 LFGEMK-----ANCILLDDGIKK 632
GEM C L DG+ K
Sbjct: 354 CIGEMGMQPSVVTCNCLIDGLCK 376
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 95/390 (24%), Positives = 174/390 (44%), Gaps = 16/390 (4%)
Query: 231 RSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVN 290
R G P V+TY T I+G +D A+ + R++ + +N++I G + +N
Sbjct: 41 RLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLN 100
Query: 291 EALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGD-VXXXXXXXXXXXXCQIKPSIVNYTSL 349
L++ +EM S PD++SYN L++ + K G + P I Y L
Sbjct: 101 RVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNIL 160
Query: 350 I-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 408
+ LCK+ G D ++E++ L++ ++P + N ++ C+ + ++ +
Sbjct: 161 LDALCKS---GHT--DNAIELFKH-LKSRVKPELMTYNILINGLCKSRRVGSVDWMMREL 214
Query: 409 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN-VLPGVVNYSTLISGFAKEQS 467
+ G N +Y ++ M K + L+L +M K G N ++S K
Sbjct: 215 KKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFAN-CAVVSALIKTGR 273
Query: 468 NFEMVERLFTRLVKAGI-TFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSY 526
E E + LV++G + + +Y TL++++ + E+ L PD+ ++
Sbjct: 274 AEEAYECMH-ELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTH 332
Query: 527 TALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 586
T ++ NI A + +G P++ T CLIDG CK ++D A +LF M+
Sbjct: 333 TIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEV 392
Query: 587 KGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 616
+ D TYT ++ K GR+ +KL
Sbjct: 393 R----DEFTYTSVVHNLCKDGRLVCASKLL 418
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/411 (22%), Positives = 181/411 (44%), Gaps = 29/411 (7%)
Query: 202 GPLPNIHTYTIMMSCGDIRL-----AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDV 256
G LP++ TY ++ G R A + ++ +G P V TY + I G + ++
Sbjct: 43 GVLPDVITYNTLIK-GYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNR 101
Query: 257 AHKLVRK-LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL-EEMKSSRTFPDVYSYNML 314
+L + LH L P + +N ++ + + G EA ++L E++ + P + +YN+L
Sbjct: 102 VLQLFDEMLHSGLSP-DMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNIL 160
Query: 315 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSM 373
L+A CK G ++KP ++ Y LI LCK++ G + + +
Sbjct: 161 LDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSVDW-----MMREL 214
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
++ PN + +L+++ + + + L L ++G + ++ ++ + K
Sbjct: 215 KKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRA 274
Query: 434 KMALELMPRMLKRNVLP-GVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
+ A E M +++ +V+Y+TL++ + K+ N + V+ L + G+ + T+T
Sbjct: 275 EEAYECMHELVRSGTRSQDIVSYNTLLNLYFKD-GNLDAVDDLLEEIEMKGLKPDDYTHT 333
Query: 493 TLISIH---GRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM 549
+++ G T K GEM + P V+ LI C ++ A LF M
Sbjct: 334 IIVNGLLNIGNTGGAEKHLACIGEM---GMQPSVVTCNCLIDGLCKAGHVDRAMRLFASM 390
Query: 550 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI-FPDVVTYTVL 599
+ + +TYT ++ CK + A++L KG+ P VL
Sbjct: 391 E----VRDEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPSSARRAVL 437
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 148/351 (42%), Gaps = 14/351 (3%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
V+ +N LIK + ++ A+ V + G+E + + N L+
Sbjct: 47 DVITYNTLIKGYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLF 106
Query: 196 XXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGK-IYRSGGNPTVVTYGTYIRGLCE 250
++ +G P++ +Y +MSC G A +IL + I+ +G P + TY + LC+
Sbjct: 107 DEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCK 166
Query: 251 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 310
G+ D A +L + L ++ P +N +I+G C+ V ++ E+K S P+ +
Sbjct: 167 SGHTDNAIELFKHLKSRVKP-ELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVT 225
Query: 311 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIK-PSIVNYTSLILLCKNKLKGQQLYDKSLEV 369
Y +L + K + N + L K + ++ Y E
Sbjct: 226 YTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTG-RAEEAY----EC 280
Query: 370 YNSMLQNAIRPNTIIC-NHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 428
+ ++++ R I+ N +L ++ ++G LLE+ +G+ + Y++ I++ +
Sbjct: 281 MHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLL 340
Query: 429 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRL 479
A + + + + + P VV + LI G K + + RLF +
Sbjct: 341 NIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCK-AGHVDRAMRLFASM 390
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/409 (21%), Positives = 151/409 (36%), Gaps = 76/409 (18%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKC-LXXXXXXXXXXXX 194
V +N LI A N ML Q+F + GL + S N L+ C
Sbjct: 82 DVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKIL 141
Query: 195 XXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE 250
+ G +P I TY I++ G A E+ K +S P ++TY I GLC+
Sbjct: 142 HEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELF-KHLKSRVKPELMTYNILINGLCK 200
Query: 251 CGYVDVAHKLVRKLHCKLHPLNSHCFN--------------------------------- 277
V ++R+L + N+ +
Sbjct: 201 SRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFA 260
Query: 278 --AVIHGFCQRGAVNEALEVLEEM-KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 334
AV+ + G EA E + E+ +S D+ SYN LLN + K G++
Sbjct: 261 NCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEI 320
Query: 335 XXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVH 392
+KP +T ++ LL G + K L M ++P+ + CN ++
Sbjct: 321 EMKGLKPDDYTHTIIVNGLLNIGNTGGAE---KHLACIGEM---GMQPSVVTCNCLIDGL 374
Query: 393 CREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM----------PR 442
C+ G A+ L + ++++Y ++H +CK+ A +L+ P
Sbjct: 375 CKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPS 430
Query: 443 MLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
+R VL G+ +E +++ + + +KA I NT Y
Sbjct: 431 SARRAVLSGI-----------RETVSYQAARKTHIK-IKAAIECNTLMY 467
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 109 bits (272), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 127/566 (22%), Positives = 224/566 (39%), Gaps = 67/566 (11%)
Query: 77 WVETH-GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHH 135
W T GF HS + +R + H + V+ LL ++ + LP
Sbjct: 65 WASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLL-------------DEMPDSIGLPPD 111
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
+F +I+ F +++ V G++ ++ N +L L
Sbjct: 112 DA-IFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFT 170
Query: 196 XXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
+M +G +++TY I+M I ++L + SG P V Y T + LC+
Sbjct: 171 RKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKN 230
Query: 252 GYVDVAHKLVRKL--------------HCKLHPLNS------HCFN-----------AVI 280
G V A L+ ++ +C L CF+ V+
Sbjct: 231 GKVGRARSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVM 290
Query: 281 HGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIK 340
C G V+EALEVLE ++S DV + N L+ +C G +
Sbjct: 291 EVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYL 350
Query: 341 PSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFR 399
P++ Y LI C + D +L+ +N M +AIR N N ++R G+
Sbjct: 351 PNVETYNLLIAGYCD-----VGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTD 405
Query: 400 EALTLLEDFHEQ----GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
+ L +LE + G ++ YN +I+ KE+ + ALE + +M K + P V+
Sbjct: 406 DGLKILEMMQDSDTVHGARID--PYNCVIYGFYKENRWEDALEFLLKMEK--LFPRAVDR 461
Query: 456 S-TLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEM 514
S LIS E+ + ++ + +++ G + LI + + K ++ +M
Sbjct: 462 SFKLIS--LCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDM 519
Query: 515 IQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 574
+ P ++ A+I FC ++ ++M+ GC+P+ +Y L++ C I
Sbjct: 520 VTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCVKGDI 579
Query: 575 DLATQLFDEMKRKGIFPDVVTYTVLI 600
A LF M K I PD ++ L+
Sbjct: 580 QKAWLLFSRMVEKSIVPDPSMWSSLM 605
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 163/412 (39%), Gaps = 63/412 (15%)
Query: 218 DIRLAAEILG-KIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 276
DI +A E K+ SG + V TYG ++GL + KL++ + N+ +
Sbjct: 161 DIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVY 220
Query: 277 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 336
N ++H C+ G V A ++ EMK P+ ++N+L++A+C
Sbjct: 221 NTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYC----------------- 259
Query: 337 CQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREG 396
N LI +S+ + P+ + ++ V C EG
Sbjct: 260 --------NEQKLI--------------QSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEG 297
Query: 397 QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYS 456
+ EAL +LE +G ++ + N ++ C ++A M ++ LP V Y+
Sbjct: 298 RVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYN 357
Query: 457 TLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI---SIHGRTRKRHKAYCRFGE 513
LI+G+ + + F + I +N T+ TLI SI GRT K E
Sbjct: 358 LLIAGYC-DVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKIL----E 412
Query: 514 MIQSCLCPDEV------SYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDG 567
M+Q D V Y +I F A +M ++ P + +
Sbjct: 413 MMQDS---DTVHGARIDPYNCVIYGFYKENRWEDALEFLLKMEKL--FPRAVDRSFKLIS 467
Query: 568 FCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
C+ +D +D+M +G P ++ LI Y +HG+I E +L +M
Sbjct: 468 LCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHGKIEESLELINDM 519
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/351 (23%), Positives = 144/351 (41%), Gaps = 20/351 (5%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFP-DVYSYNMLLNAFCKKGDVXXXXXXXXXX 334
+ A+ H C + ++L+EM S P D + ++ F + +
Sbjct: 79 YRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLV 138
Query: 335 XXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYN-SMLQNAIRPNTIICNHILRVH 392
IKPS+ + S++ +L K + D + E + M+ + I + +++
Sbjct: 139 SKFGIKPSLKVFNSILDVLVKEDI------DIAREFFTRKMMASGIHGDVYTYGILMKGL 192
Query: 393 CREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGV 452
+ + LL+ G+ N YN ++H +CK A LM M + P
Sbjct: 193 SLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PND 248
Query: 453 VNYSTLISGFAKEQ---SNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYC 509
V ++ LIS + EQ + ++E+ F+ + TK L + GR + +
Sbjct: 249 VTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCN-EGRVSEALEVLE 307
Query: 510 RFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 569
R D V+ L+ +C + +M VA F EM R G LPN+ TY LI G+C
Sbjct: 308 RVESKGGKV---DVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYC 364
Query: 570 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
+ +D A F++MK I + T+ LI GR + K+ M+
Sbjct: 365 DVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQ 415
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%)
Query: 233 GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEA 292
GG P+++ I + G ++ + +L+ + + + S FNAVI GFC++ V
Sbjct: 488 GGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNG 547
Query: 293 LEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL 352
++ +E+M PD SYN LL C KGD+ I P ++SL+
Sbjct: 548 IKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFC 607
Query: 353 CKNK 356
K
Sbjct: 608 LSQK 611
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 154/316 (48%), Gaps = 27/316 (8%)
Query: 202 GPLPNIHTYTIMMS--C--GDIRLAAEILGKIYRSG-GNPTVVTYGTYIRGLCECGY--- 253
G PN + I++ C GDI A ++ ++ RSG P +TY T L +C +
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYST----LMDCLFAHS 246
Query: 254 -----VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDV 308
V++ ++ K P+ FN +I+GFC+ G V A ++L+ MK + P+V
Sbjct: 247 RSKEAVELFEDMISKEGISPDPVT---FNVMINGFCRAGEVERAKKILDFMKKNGCNPNV 303
Query: 309 YSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSL 367
Y+Y+ L+N FCK G + +K V YT+L+ C+N G+ D+++
Sbjct: 304 YNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRN---GET--DEAM 358
Query: 368 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
++ M + R +T+ N ILR EG+ EAL +L+ + +G++LN+ SY I++ +
Sbjct: 359 KLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNAL 418
Query: 428 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFN 487
C + A++ + M +R + P ++ L+ E E+ R+ ++ G+
Sbjct: 419 CCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLC-ESGYTEIGVRVLIGFLRIGLIPG 477
Query: 488 TKTYTTLISIHGRTRK 503
K++ ++ + RK
Sbjct: 478 PKSWGAVVESICKERK 493
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 87/147 (59%), Gaps = 8/147 (5%)
Query: 481 KAGITF-NTKTYTTLIS---IHGRTRKRHKAYCRFGEMI-QSCLCPDEVSYTALIAVFCN 535
++GI++ N+ TY+TL+ H R+++ A F +MI + + PD V++ +I FC
Sbjct: 224 RSGISYPNSITYSTLMDCLFAHSRSKE---AVELFEDMISKEGISPDPVTFNVMINGFCR 280
Query: 536 IREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVT 595
E+ A + M + GC PN+Y Y+ L++GFCK+ I A Q FDE+K+ G+ D V
Sbjct: 281 AGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVG 340
Query: 596 YTVLIAWYHKHGRIGEKNKLFGEMKAN 622
YT L+ + ++G E KL GEMKA+
Sbjct: 341 YTTLMNCFCRNGETDEAMKLLGEMKAS 367
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 108/226 (47%), Gaps = 3/226 (1%)
Query: 377 AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL-NQYSYNEIIHMICKESYPKM 435
++PNT I N +++ HC+ G A ++E+ GI+ N +Y+ ++ + S K
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 436 ALELMPRML-KRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTL 494
A+EL M+ K + P V ++ +I+GF + E +++ + K G N Y+ L
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCR-AGEVERAKKILDFMKKNGCNPNVYNYSAL 309
Query: 495 ISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGC 554
++ + K +A F E+ ++ L D V YT L+ FC E + A L EM C
Sbjct: 310 MNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRC 369
Query: 555 LPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
+ TY ++ G + A Q+ D+ +G+ + +Y +++
Sbjct: 370 RADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIIL 415
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/353 (19%), Positives = 149/353 (42%), Gaps = 10/353 (2%)
Query: 236 PTVVTYGTYIRGLCECGYVDVAHKLV--RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEAL 293
P++ T + L + G V+++ KL+ K + L P N+ FN ++ C+ G +N A
Sbjct: 158 PSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQP-NTCIFNILVKHHCKNGDINFAF 216
Query: 294 EVLEEMKSSR-TFPDVYSYNMLLNA-FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL 351
V+EEMK S ++P+ +Y+ L++ F I P V + +I
Sbjct: 217 LVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMI- 275
Query: 352 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 411
N +++ ++ + M +N PN + ++ C+ G+ +EA ++ +
Sbjct: 276 ---NGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKT 332
Query: 412 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEM 471
G+ L+ Y +++ C+ A++L+ M + Y+ ++ G + E + E
Sbjct: 333 GLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEA 392
Query: 472 VERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIA 531
++ + + G+ N +Y +++ + KA M + + P ++ L+
Sbjct: 393 LQ-MLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVV 451
Query: 532 VFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM 584
C + + RIG +P ++ +++ CK + +L D +
Sbjct: 452 RLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 103/222 (46%), Gaps = 2/222 (0%)
Query: 380 PNTIICNHILRVHCREGQFREALTLLEDF-HEQGINLNQYSYNEIIHMICKESYPKMALE 438
PN+I + ++ + +EA+ L ED ++GI+ + ++N +I+ C+ + A +
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKK 289
Query: 439 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIH 498
++ M K P V NYS L++GF K + ++ F + K G+ +T YTTL++
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMNGFCK-VGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCF 348
Query: 499 GRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNL 558
R + +A GEM S D ++Y ++ + A + + G N
Sbjct: 349 CRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNK 408
Query: 559 YTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
+Y +++ C ++ A + M +GI+P T+ L+
Sbjct: 409 GSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 136/315 (43%), Gaps = 16/315 (5%)
Query: 139 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNF--LLKCLXXXXXXXXXXXXXX 196
+FN+L+K N + A V K G+ + S + L+ CL
Sbjct: 198 IFNILVKHHCKNGDINFAFLVVEEMKRSGIS-YPNSITYSTLMDCLFAHSRSKEAVELFE 256
Query: 197 XLM-ETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
++ + G P+ T+ +M++ G++ A +IL + ++G NP V Y + G C+
Sbjct: 257 DMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKV 316
Query: 252 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 311
G + A + ++ L++ + +++ FC+ G +EA+++L EMK+SR D +Y
Sbjct: 317 GKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTY 376
Query: 312 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLEV 369
N++L +G + + +Y ++ L C +L +K+++
Sbjct: 377 NVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGEL------EKAVKF 430
Query: 370 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 429
+ M + I P+ N ++ C G + +L F G+ S+ ++ ICK
Sbjct: 431 LSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICK 490
Query: 430 ESYPKMALELMPRML 444
E EL+ ++
Sbjct: 491 ERKLVHVFELLDSLV 505
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 123/254 (48%), Gaps = 1/254 (0%)
Query: 368 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
++ + M+++ +PNT+ N ++ + R +EA+ + E G ++ +Y +I +
Sbjct: 380 KLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIH 439
Query: 428 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFN 487
K + +A+++ RM + + P YS +I+ K + RLF +V G T N
Sbjct: 440 AKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKA-GHLPAAHRLFCEMVGQGCTPN 498
Query: 488 TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQ 547
T+ +I++H + R A + +M + PD+V+Y+ ++ V + + A +F
Sbjct: 499 LVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFA 558
Query: 548 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 607
EM R +P+ Y L+D + K +D A Q + M + G+ P+V T L++ + +
Sbjct: 559 EMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVH 618
Query: 608 RIGEKNKLFGEMKA 621
R+ E L M A
Sbjct: 619 RMSEAYNLLQSMLA 632
Score = 99.8 bits (247), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 111/226 (49%), Gaps = 1/226 (0%)
Query: 394 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 453
R QF E LL++ G N +YN +IH + +Y K A+ + +M + P V
Sbjct: 371 RAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRV 430
Query: 454 NYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE 513
Y TLI AK ++ ++ R+ +AG++ +T TY+ +I+ G+ A+ F E
Sbjct: 431 TYCTLIDIHAKA-GFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCE 489
Query: 514 MIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 573
M+ P+ V++ +IA+ R A L+++M G P+ TY+ +++ +
Sbjct: 490 MVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGF 549
Query: 574 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
++ A +F EM+RK PD Y +L+ + K G + + + + M
Sbjct: 550 LEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAM 595
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 125/263 (47%), Gaps = 7/263 (2%)
Query: 340 KPSIVNYTSLILLCKNKLKGQQLYDK-SLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 398
KP+ V Y LI G+ Y K ++ V+N M + P+ + ++ +H + G
Sbjct: 391 KPNTVTYNRLI-----HSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFL 445
Query: 399 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 458
A+ + + E G++ + ++Y+ II+ + K + A L M+ + P +V ++ +
Sbjct: 446 DIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIM 505
Query: 459 ISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSC 518
I+ AK + N+E +L+ + AG + TY+ ++ + G +A F EM +
Sbjct: 506 IALHAKAR-NYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKN 564
Query: 519 LCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLAT 578
PDE Y L+ ++ ++ A +Q M + G PN+ T L+ F ++ + A
Sbjct: 565 WVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAY 624
Query: 579 QLFDEMKRKGIFPDVVTYTVLIA 601
L M G+ P + TYT+L++
Sbjct: 625 NLLQSMLALGLHPSLQTYTLLLS 647
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 115/246 (46%), Gaps = 22/246 (8%)
Query: 390 RVHCREG-----------QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 438
R HC G +F+ E H G ++ Y N+++ + ++Y AL
Sbjct: 288 RQHCNPGYVVENVSSILRRFKWGHAAEEALHNFGFRMDAYQANQVLKQM--DNYAN-ALG 344
Query: 439 LMPRMLKRNVLPGVVN----YSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTL 494
LKR PG + Y+T++ + + F + +L +V+ G NT TY L
Sbjct: 345 FF-YWLKRQ--PGFKHDGHTYTTMVGNLGRAK-QFGEINKLLDEMVRDGCKPNTVTYNRL 400
Query: 495 ISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGC 554
I +GR +A F +M ++ PD V+Y LI + +++A ++Q M G
Sbjct: 401 IHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGL 460
Query: 555 LPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNK 614
P+ +TY+ +I+ K ++ A +LF EM +G P++VT+ ++IA + K K
Sbjct: 461 SPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALK 520
Query: 615 LFGEMK 620
L+ +M+
Sbjct: 521 LYRDMQ 526
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 130/331 (39%), Gaps = 50/331 (15%)
Query: 240 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 299
TY T + L +KL+ ++ N+ +N +IH + + + EA+ V +M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 300 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 359
+ + PD +Y L++ K G
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAG------------------------------------- 443
Query: 360 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 419
D ++++Y M + + P+T + I+ + G A L + QG N +
Sbjct: 444 --FLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVT 501
Query: 420 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS-----GFAKEQSNFEMVER 474
+N +I + K + AL+L M P V YS ++ GF +E E
Sbjct: 502 FNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEE------AEG 555
Query: 475 LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFC 534
+F + + + Y L+ + G+ KA+ + M+Q+ L P+ + +L++ F
Sbjct: 556 VFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFL 615
Query: 535 NIREMNVACALFQEMSRIGCLPNLYTYTCLI 565
+ M+ A L Q M +G P+L TYT L+
Sbjct: 616 RVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 130/334 (38%), Gaps = 44/334 (13%)
Query: 208 HTYTIMM-SCGDIRLAAEI---LGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRK 263
HTYT M+ + G + EI L ++ R G P VTY
Sbjct: 360 HTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTY---------------------- 397
Query: 264 LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGD 323
N +IH + + + EA+ V +M+ + PD +Y L++ K G
Sbjct: 398 -------------NRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGF 444
Query: 324 VXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTI 383
+ + P Y+ +I N L + ++ M+ PN +
Sbjct: 445 LDIAMDMYQRMQEAGLSPDTFTYSVII----NCLGKAGHLPAAHRLFCEMVGQGCTPNLV 500
Query: 384 ICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRM 443
N ++ +H + + AL L D G ++ +Y+ ++ ++ + + A + M
Sbjct: 501 TFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM 560
Query: 444 LKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRK 503
++N +P Y L+ + K N + + + +++AG+ N T +L+S R +
Sbjct: 561 QRKNWVPDEPVYGLLVDLWGK-AGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHR 619
Query: 504 RHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIR 537
+AY M+ L P +YT L++ + R
Sbjct: 620 MSEAYNLLQSMLALGLHPSLQTYTLLLSCCTDAR 653
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 89/218 (40%), Gaps = 4/218 (1%)
Query: 142 VLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMET 201
LI + A L+ A ++ + GL + + ++ CL ++
Sbjct: 434 TLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQ 493
Query: 202 GPLPNIHTYTIMMSCGDIRLAAEILGKIYR----SGGNPTVVTYGTYIRGLCECGYVDVA 257
G PN+ T+ IM++ E K+YR +G P VTY + L CG+++ A
Sbjct: 494 GCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEA 553
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
+ ++ K + + ++ + + G V++A + + M + P+V + N LL+
Sbjct: 554 EGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLST 613
Query: 318 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 355
F + + + PS+ YT L+ C +
Sbjct: 614 FLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTD 651
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 118/556 (21%), Positives = 218/556 (39%), Gaps = 54/556 (9%)
Query: 57 VVRVIKSLNWKIAREKKFGSWVETH-GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVG 115
+ RV+ +R F WV+ G +V + +++H + L +++
Sbjct: 82 ISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIE 141
Query: 116 YCKCDDSFEQFSTLL---DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHI 172
+ + F L+ D + +VF++L+K + ++E +VF + G + +
Sbjct: 142 LTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSV 201
Query: 173 RSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGD--IRLAAEILGK 228
+CN LL L + G PN +T+ I+ + C D R + L K
Sbjct: 202 VTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEK 261
Query: 229 IYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGA 288
+ G P +VTY T + C G + A L + ++ + + + ++I G C+ G
Sbjct: 262 MEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGR 321
Query: 289 VNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTS 348
V EA + M PD SYN L+ A+CK+G
Sbjct: 322 VREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEG-------------------------- 355
Query: 349 LILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 408
+ +S ++ + ML N++ P+ C I+ REG+ A+ + +
Sbjct: 356 -------------MMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVEL 402
Query: 409 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKR---NVLPGVVNYSTLISGFAKE 465
+++ + +I +C+E P A L+ R+++ P Y+ LI ++
Sbjct: 403 RRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPET--YNNLIESLSRC 460
Query: 466 QSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVS 525
+ E L +L + KTY LI R + +A EM S + PD
Sbjct: 461 DA-IEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFI 519
Query: 526 YTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID-YIDLATQLFDEM 584
AL+ +C + + A L + + + +Y L+ C+ A +L + M
Sbjct: 520 CGALVYGYCKELDFDKAERLLSLFAMEFRIFDPESYNSLVKAVCETGCGYKKALELQERM 579
Query: 585 KRKGIFPDVVTYTVLI 600
+R G P+ +T LI
Sbjct: 580 QRLGFVPNRLTCKYLI 595
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 113/288 (39%), Gaps = 37/288 (12%)
Query: 368 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
+VY+ M + I PNT N + V C + FRE LE E+G + +YN ++
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 428 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFN 487
C+ K A L M +R V+P +V Y++LI G K+ E + F R+V GI +
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVRE-AHQTFHRMVDRGIKPD 340
Query: 488 TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQ 547
+Y TLI + + ++ EM+ + + PD + ++ F + A
Sbjct: 341 CMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVV 400
Query: 548 EMSRI------------------------------------GCLPNLYTYTCLIDGFCKI 571
E+ R+ G TY LI+ +
Sbjct: 401 ELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIESLSRC 460
Query: 572 DYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
D I+ A L ++K + D TY LI + GR E L EM
Sbjct: 461 DAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEM 508
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%)
Query: 474 RLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVF 533
++++ + + GI NT T+ L ++ + +M + PD V+Y L++ +
Sbjct: 222 QVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSY 281
Query: 534 CNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 593
C + A L++ M R +P+L TYT LI G CK + A Q F M +GI PD
Sbjct: 282 CRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDC 341
Query: 594 VTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
++Y LI Y K G + + KL EM N ++ D
Sbjct: 342 MSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPD 375
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 100/470 (21%), Positives = 184/470 (39%), Gaps = 75/470 (15%)
Query: 228 KIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRG 287
K+ + G P V Y + L + GY D+A + S F ++ G C+ G
Sbjct: 218 KMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAG 277
Query: 288 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYT 347
+ E LE+L+ M+ + PDV++Y ++ +G++ +IKP ++ Y
Sbjct: 278 RIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYG 337
Query: 348 SLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLE 406
+L++ LCK+ G+ ++ E++ M I + I ++ +G+ R A L E
Sbjct: 338 TLVVGLCKD---GR--VERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWE 392
Query: 407 DFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA--K 464
D + G + YN +I +C + A +L ++ + P S ++ +
Sbjct: 393 DLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMN 452
Query: 465 EQSNFEMV-ERL-------------FTRLVKAGITFNT-----------------KTYTT 493
S+F V ER+ F +L+ A N Y
Sbjct: 453 RLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNI 512
Query: 494 LISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIG 553
L+ + K+ F EM + PD SY+ I F ++ AC+ +++ +
Sbjct: 513 LMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMS 572
Query: 554 CLPNLYTYTCLIDGFCKIDYIDLAT----------------------------------- 578
C+P++ Y L G C+I ID
Sbjct: 573 CVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKV 632
Query: 579 -QLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
++ DEM ++G+F + V Y +I+ KHG I ++F E+K ++ +
Sbjct: 633 MKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTE 682
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 120/271 (44%), Gaps = 5/271 (1%)
Query: 341 PSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFRE 400
PS + LI + + +G ++Y VY M + +P + N I+ + G F
Sbjct: 191 PSEKQFEILIRMHADNRRGLRVY----YVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDL 246
Query: 401 ALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 460
AL + EDF E G+ ++ ++ +CK + LE++ RM + P V Y+ +I
Sbjct: 247 ALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIK 306
Query: 461 GFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLC 520
E N + R++ + + I + Y TL+ + + + Y F EM +
Sbjct: 307 TLVSE-GNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQIL 365
Query: 521 PDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQL 580
D Y LI F ++ AC L++++ G + ++ Y +I G C ++ +D A +L
Sbjct: 366 IDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKL 425
Query: 581 FDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
F + + PD T + ++ Y R+ +
Sbjct: 426 FQVAIEEELEPDFETLSPIMVAYVVMNRLSD 456
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 103/247 (41%), Gaps = 21/247 (8%)
Query: 394 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 453
R G FR A L E QG ++ + +I M + +M K P V
Sbjct: 170 RNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVF 229
Query: 454 NYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFG- 512
Y+ ++ K F++ ++ + G+ + T+ L+ K C+ G
Sbjct: 230 LYNRIMDALVK-NGYFDLALAVYEDFKEDGLVEESTTFMILV----------KGLCKAGR 278
Query: 513 --EMIQ------SCLC-PDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTC 563
EM++ LC PD +YTA+I + ++ + ++ EM R P++ Y
Sbjct: 279 IEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGT 338
Query: 564 LIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANC 623
L+ G CK ++ +LF EMK K I D Y VLI + G++ L+ ++ +
Sbjct: 339 LVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSG 398
Query: 624 ILLDDGI 630
+ D GI
Sbjct: 399 YIADIGI 405
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 165/402 (41%), Gaps = 50/402 (12%)
Query: 240 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 299
+Y + I L + D +++R + + F +I + + G+V++A++V ++
Sbjct: 83 SYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKI 142
Query: 300 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 359
S + S N L+N G++ +++P+ V++ LI +K
Sbjct: 143 TSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCD- 201
Query: 360 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 419
++ + +V++ ML+ ++P+ + N ++ CR +A +LLED ++ I N +
Sbjct: 202 ---WEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVT 258
Query: 420 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRL 479
+ ++ +C + A +LM M R PG+VNY L+S K
Sbjct: 259 FGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGK--------------- 303
Query: 480 VKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREM 539
GR +A GEM + + PD V Y L+ C +
Sbjct: 304 ------------------RGRI---DEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRV 342
Query: 540 NVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 599
A + EM GC PN TY +IDGFC+I+ D + + M P T+ +
Sbjct: 343 PEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCM 402
Query: 600 IAWYHKHGRI----------GEKNKLFGEMKANCILLDDGIK 631
+A K G + G+KN FG +L D IK
Sbjct: 403 VAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIK 444
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 9/194 (4%)
Query: 450 PGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYC 509
P V+++ LI GF ++ ++E ++F +++ + + TY +LI R KA
Sbjct: 184 PNSVSFNILIKGFL-DKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 510 RFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 569
+MI+ + P+ V++ L+ C E N A L +M GC P L Y L+
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLG 302
Query: 570 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK--------A 621
K ID A L EMK++ I PDVV Y +L+ R+ E ++ EM+ A
Sbjct: 303 KRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA 362
Query: 622 NCILLDDGIKKLQD 635
++ DG +++D
Sbjct: 363 TYRMMIDGFCRIED 376
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 1/221 (0%)
Query: 400 EALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLI 459
EAL+L + E G + SY+ +I+ + K +++ + RNV + LI
Sbjct: 64 EALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLI 123
Query: 460 SGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCL 519
+ K S + ++ +F ++ ++ TLI++ + KA F L
Sbjct: 124 QHYGKAGSVDKAID-VFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRL 182
Query: 520 CPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 579
P+ VS+ LI F + + AC +F EM + P++ TY LI C+ D + A
Sbjct: 183 RPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKS 242
Query: 580 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
L ++M +K I P+ VT+ +L+ G E KL +M+
Sbjct: 243 LLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDME 283
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 74/362 (20%), Positives = 132/362 (36%), Gaps = 71/362 (19%)
Query: 135 HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXX 194
++ N LI V N LE A F AK++ L + S N L+K
Sbjct: 149 RTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIK-------------- 194
Query: 195 XXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 254
+ C D A ++ ++ P+VVTY + I LC +
Sbjct: 195 ----------------GFLDKC-DWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 255 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 314
A L+ + K N+ F ++ G C +G NEA +++ +M+ P + +Y +L
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGIL 297
Query: 315 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML 374
++ K+G + +IKP +V +YN
Sbjct: 298 MSDLGKRGRIDEAKLLLGEMKKRRIKPDVV------------------------IYN--- 330
Query: 375 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 434
I+ NH+ C E + EA +L + +G N +Y +I C+
Sbjct: 331 --------ILVNHL----CTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFD 378
Query: 435 MALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTL 494
L ++ ML P + +++G K N + + + K ++F + + L
Sbjct: 379 SGLNVLNAMLASRHCPTPATFVCMVAGLIK-GGNLDHACFVLEVMGKKNLSFGSGAWQNL 437
Query: 495 IS 496
+S
Sbjct: 438 LS 439
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 112/283 (39%), Gaps = 17/283 (6%)
Query: 52 ELFHVV-----VRVIKSLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEV 106
++FH + VR I+SLN I G + F R+ ++ +
Sbjct: 137 DVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFN------ 190
Query: 107 FALLRDIVGYCKCDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKN 165
L++ + C + + + F +L++ SV+ +N LI N + A +
Sbjct: 191 -ILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIK 249
Query: 166 VGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRL 221
+ + + L+K L + G P + Y I+MS G I
Sbjct: 250 KRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDE 309
Query: 222 AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIH 281
A +LG++ + P VV Y + LC V A++++ ++ K N+ + +I
Sbjct: 310 AKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMID 369
Query: 282 GFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDV 324
GFC+ + L VL M +SR P ++ ++ K G++
Sbjct: 370 GFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNL 412
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 152/329 (46%), Gaps = 7/329 (2%)
Query: 271 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 330
LN F V+ + + V+EA+ M+ P++ ++N LL+A CK +V
Sbjct: 166 LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEV 225
Query: 331 XXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 390
+ P Y+ L+ + K+ EV+ M+ P+ + + ++
Sbjct: 226 FENMRD-RFTPDSKTYSILL----EGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVD 280
Query: 391 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 450
+ C+ G+ EAL ++ + Y+ ++H E+ + A++ M + +
Sbjct: 281 ILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKA 340
Query: 451 GVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCR 510
V +++LI F K + + V R+ + G+T N+K+ ++ ++ +A+
Sbjct: 341 DVAVFNSLIGAFCK-ANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDV 399
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
F +MI+ C PD +YT +I +FC +EM A +++ M + G P+++T++ LI+G C+
Sbjct: 400 FRKMIKVCE-PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCE 458
Query: 571 IDYIDLATQLFDEMKRKGIFPDVVTYTVL 599
A L +EM GI P VT+ L
Sbjct: 459 ERTTQKACVLLEEMIEMGIRPSGVTFGRL 487
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 138/316 (43%), Gaps = 9/316 (2%)
Query: 270 PLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXX 329
P N FN ++ C+ V +A EV E M+ R PD +Y++LL + K+ ++
Sbjct: 200 PPNLVAFNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGKEPNLPKARE 258
Query: 330 XXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHI 388
P IV Y+ ++ +LCK G+ D++L + SM + +P T I + +
Sbjct: 259 VFREMIDAGCHPDIVTYSIMVDILCK---AGR--VDEALGIVRSMDPSICKPTTFIYSVL 313
Query: 389 LRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV 448
+ + E + EA+ + G+ + +N +I CK + K ++ M + V
Sbjct: 314 VHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 373
Query: 449 LPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAY 508
P + + ++ + E + +F +++K + TYT +I + ++ A
Sbjct: 374 TPNSKSCNIILRHLIERGEKDEAFD-VFRKMIKV-CEPDADTYTMVIKMFCEKKEMETAD 431
Query: 509 CRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGF 568
+ M + + P +++ LI C R AC L +EM +G P+ T+ L
Sbjct: 432 KVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLL 491
Query: 569 CKIDYIDLATQLFDEM 584
K + D+ L ++M
Sbjct: 492 IKEEREDVLKFLNEKM 507
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/400 (19%), Positives = 173/400 (43%), Gaps = 29/400 (7%)
Query: 73 KFGSWVETHG-FSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLD 131
+F W E + HSV + ++I + A + + L+ D++ +
Sbjct: 119 RFFQWSEKQRHYEHSVRAYHMMIESTA----KIRQYKLMWDLINAMRKKKML-------- 166
Query: 132 LPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXX 191
+V F ++++ +A ++ A F + L ++ + N LL L
Sbjct: 167 ----NVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKA 222
Query: 192 XXXXXXLMETGPLPNIHTYTIMMSCG----DIRLAAEILGKIYRSGGNPTVVTYGTYIRG 247
M P+ TY+I++ ++ A E+ ++ +G +P +VTY +
Sbjct: 223 QEVFEN-MRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDI 281
Query: 248 LCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 307
LC+ G VD A +VR + + + ++ ++H + + EA++ EM+ S D
Sbjct: 282 LCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKAD 341
Query: 308 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKL-KGQQLYDKS 366
V +N L+ AFCK + + P N S ++ ++ + +G++ D++
Sbjct: 342 VAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTP---NSKSCNIILRHLIERGEK--DEA 396
Query: 367 LEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHM 426
+V+ M++ P+ ++++ C + + A + + ++G+ + ++++ +I+
Sbjct: 397 FDVFRKMIK-VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLING 455
Query: 427 ICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ 466
+C+E + A L+ M++ + P V + L KE+
Sbjct: 456 LCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEE 495
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 117/283 (41%), Gaps = 21/283 (7%)
Query: 360 QQLYDKSLEVYNSMLQ---------------NAIRPNTIICNH----ILRVHCREGQFRE 400
Q+ Y+ S+ Y+ M++ NA+R ++ ++R + R + E
Sbjct: 127 QRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDE 186
Query: 401 ALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 460
A+ + + N ++N ++ +CK + A E+ M R P YS L+
Sbjct: 187 AIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLE 245
Query: 461 GFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLC 520
G+ KE N +F ++ AG + TY+ ++ I + + +A M S
Sbjct: 246 GWGKE-PNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICK 304
Query: 521 PDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQL 580
P Y+ L+ + + A F EM R G ++ + LI FCK + + ++
Sbjct: 305 PTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRV 364
Query: 581 FDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANC 623
EMK KG+ P+ + +++ + G E +F +M C
Sbjct: 365 LKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIKVC 407
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 114/265 (43%), Gaps = 14/265 (5%)
Query: 371 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQY-----SYNEIIH 425
+++ Q+ +R + + +L +FR A L F + Y +Y+ +I
Sbjct: 89 SALDQSGLRVSQEVVEDVL------NRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIE 142
Query: 426 MICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGIT 485
K K+ +L+ M K+ +L V + ++ +A+ Q E + F + K +
Sbjct: 143 STAKIRQYKLMWDLINAMRKKKML-NVETFCIVMRKYARAQKVDEAI-YAFNVMEKYDLP 200
Query: 486 FNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACAL 545
N + L+S +++ KA F E ++ PD +Y+ L+ + + A +
Sbjct: 201 PNLVAFNGLLSALCKSKNVRKAQEVF-ENMRDRFTPDSKTYSILLEGWGKEPNLPKAREV 259
Query: 546 FQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHK 605
F+EM GC P++ TY+ ++D CK +D A + M P Y+VL+ Y
Sbjct: 260 FREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGT 319
Query: 606 HGRIGEKNKLFGEMKANCILLDDGI 630
R+ E F EM+ + + D +
Sbjct: 320 ENRLEEAVDTFLEMERSGMKADVAV 344
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/475 (19%), Positives = 201/475 (42%), Gaps = 72/475 (15%)
Query: 202 GPLPNIHTYTIMMSC---GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAH 258
G P++ +++ +C GD + A E++ + G +V ++ L +D
Sbjct: 145 GSSPDVFD-SLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFW 203
Query: 259 KLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAF 318
K+ +++ + N + FN VI+ FC+ + EAL V M +P+V S+NM+++
Sbjct: 204 KVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGA 263
Query: 319 CKKGDVXXXXXXXXXXXXCQ---IKPSIVNYTSLI-LLCK-------NKLKGQQL----- 362
CK GD+ + P+ V Y S+I CK +++G +
Sbjct: 264 CKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVD 323
Query: 363 ------------------YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 404
D++L + + M + NT+I N I+ EG A+++
Sbjct: 324 CNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSV 383
Query: 405 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 464
L D + + + +++++ ++ +C+ Y K A+E ++ ++ ++ +V ++TL+ F +
Sbjct: 384 LRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVR 443
Query: 465 EQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEV 524
++ +++ ++ G++ + ++ TLI + + K +A + MI+ + V
Sbjct: 444 DKK-LACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLV 502
Query: 525 SYTALIAVFC---------------NIREMNVACALFQEMSRIGCLP------------- 556
Y +++ I+++ L E + G +
Sbjct: 503 IYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTYNTLLNESLKTGNVEEADDILSKMQKQD 562
Query: 557 -----NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 606
+L T+ +I+ CK + A ++ M +G+ PD +TY LI + KH
Sbjct: 563 GEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKH 617
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 90/411 (21%), Positives = 171/411 (41%), Gaps = 51/411 (12%)
Query: 198 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGN---PTVVTYGTYIRGLCE 250
+++ G PN+ ++ +M+ GD+R A ++LGK+ GN P VTY + I G C+
Sbjct: 244 MLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCK 303
Query: 251 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 310
G +D+A ++ + N + A++ + + G+ +EAL + +EM S +
Sbjct: 304 AGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVI 363
Query: 311 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL---LCKNKLKGQQLYDKSL 367
YN ++ +GD+ ++ I +T I+ LC+N Y K
Sbjct: 364 YNSIVYWLFMEGDIEGAMSVLRDMNSKNMQ--IDRFTQAIVVRGLCRNG------YVKEA 415
Query: 368 EVYNSMLQNAIRPNTIICNHILRVH-CREGQFREALTLLEDFHEQGINLNQYSYNEIIHM 426
+ + I+C++ L H R+ + A +L QG++L+ S+ +I
Sbjct: 416 VEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDG 475
Query: 427 ICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITF 486
KE + ALE+ M+K N +V Y+++++G +K + +K +T+
Sbjct: 476 YLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTY 535
Query: 487 NTKTYTTLIS--------IHGRTRKRHKA--------------YCRFGE----------M 514
NT +L + I + +K+ C+FG M
Sbjct: 536 NTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFM 595
Query: 515 IQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLI 565
++ + PD ++Y LI F R L + G P+ + Y ++
Sbjct: 596 VERGVVPDSITYGTLITSFSKHRSQEKVVELHDYLILQGVTPHEHIYLSIV 646
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 126/267 (47%), Gaps = 4/267 (1%)
Query: 364 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 423
D+ +VY M N N ++ C+E + EAL++ + G+ N S+N +
Sbjct: 200 DRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMM 259
Query: 424 IHMICKESYPKMALELMPRM--LKRN-VLPGVVNYSTLISGFAKEQSNFEMVERLFTRLV 480
I CK + AL+L+ +M + N V P V Y+++I+GF K ++ ER+ +V
Sbjct: 260 IDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCK-AGRLDLAERIRGDMV 318
Query: 481 KAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMN 540
K+G+ N +TY L+ +GR +A EM L + V Y +++ ++
Sbjct: 319 KSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIE 378
Query: 541 VACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
A ++ ++M+ + +T ++ G C+ Y+ A + ++ K + D+V + L+
Sbjct: 379 GAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLM 438
Query: 601 AWYHKHGRIGEKNKLFGEMKANCILLD 627
+ + ++ +++ G M + LD
Sbjct: 439 HHFVRDKKLACADQILGSMLVQGLSLD 465
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/411 (19%), Positives = 172/411 (41%), Gaps = 20/411 (4%)
Query: 225 ILGKIYRS----GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVI 280
+L + RS G +P V + + +R + G A++++ + + ++ H N +
Sbjct: 133 VLSGLIRSYQACGSSPDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFM 190
Query: 281 HGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIK 340
++ +V +EM S +V ++N+++ +FCK+ + C +
Sbjct: 191 GCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVW 250
Query: 341 PSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQ-NAIRPNTIICNHILRVHCREGQF 398
P++V++ +I CK G + L M+ N + PN + N ++ C+ G+
Sbjct: 251 PNVVSFNMMIDGACKT---GDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRL 307
Query: 399 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 458
A + D + G++ N+ +Y ++ + AL L M + ++ V Y+++
Sbjct: 308 DLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSI 367
Query: 459 ISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRH-KAYCRFGEMI-Q 516
+ E + E + + + + +T I + G R + K F I +
Sbjct: 368 VYWLFME-GDIEGAMSVLRDMNSKNMQIDR--FTQAIVVRGLCRNGYVKEAVEFQRQISE 424
Query: 517 SCLCPDEVSYTALIAVFCNIREMNVACA--LFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 574
L D V + L+ F +R+ +ACA + M G + ++ LIDG+ K +
Sbjct: 425 KKLVEDIVCHNTLMHHF--VRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKL 482
Query: 575 DLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 625
+ A +++D M + ++V Y ++ K G G + M+ I+
Sbjct: 483 ERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIV 533
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 154/323 (47%), Gaps = 18/323 (5%)
Query: 313 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNS 372
ML+ A+ K G+ P++++YT+L+ ++ +G + + + ++
Sbjct: 144 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALM---ESYGRGGKC-NNAEAIFRR 199
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLE---DFHEQGINLNQYSYNEIIHMICK 429
M + P+ I IL+ +F+EA + E D + + +Q Y+ +I+M K
Sbjct: 200 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 259
Query: 430 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTK 489
+ A ++ M+ + V V Y++L+S +++++ V +++ ++ ++ I +
Sbjct: 260 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF----ETSYKEVSKIYDQMQRSDIQPDVV 315
Query: 490 TYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM 549
+Y LI +GR R+ +A F EM+ + + P +Y L+ F + A +F+ M
Sbjct: 316 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 375
Query: 550 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
R P+L++YT ++ + ++ A + F +K G P++VTY LI Y K +
Sbjct: 376 RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDV 435
Query: 610 G------EKNKLFGEMKANCILL 626
EK +L G +KAN +L
Sbjct: 436 EKMMEVYEKMRLSG-IKANQTIL 457
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 158/328 (48%), Gaps = 11/328 (3%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
F +I + + G N A VL + + P+V SY L+ ++ + G
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML---QNAIRPNTIICNHILRVH 392
+PS + Y ++ K ++G + + ++ EV+ ++L ++ ++P+ + + ++ ++
Sbjct: 202 SSGPEPSAITYQ---IILKTFVEGDK-FKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 257
Query: 393 CREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGV 452
+ G + +A + +G+ + +YN + M + SY +++ ++ +M + ++ P V
Sbjct: 258 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSL--MSFETSYKEVS-KIYDQMQRSDIQPDV 314
Query: 453 VNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFG 512
V+Y+ LI + + + E + +F ++ AG+ K Y L+ + +A F
Sbjct: 315 VSYALLIKAYGRARREEEALS-VFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFK 373
Query: 513 EMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 572
M + + PD SYT +++ + N +M A F+ + G PN+ TY LI G+ K +
Sbjct: 374 SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAN 433
Query: 573 YIDLATQLFDEMKRKGIFPDVVTYTVLI 600
++ +++++M+ GI + T ++
Sbjct: 434 DVEKMMEVYEKMRLSGIKANQTILTTIM 461
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/367 (19%), Positives = 151/367 (41%), Gaps = 11/367 (2%)
Query: 217 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 276
G+ A +L + + G P V++Y + G + A + R++ ++ +
Sbjct: 153 GNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITY 212
Query: 277 NAVIHGFCQRGAVNEALEVLEEM---KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXX 333
++ F + EA EV E + K S PD Y+M++ + K G+
Sbjct: 213 QIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSS 272
Query: 334 XXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 393
+ S V Y SL+ + Y + ++Y+ M ++ I+P+ + +++ +
Sbjct: 273 MVGKGVPQSTVTYNSLMSF-------ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYG 325
Query: 394 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 453
R + EAL++ E+ + G+ +YN ++ + A + M + + P +
Sbjct: 326 RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLW 385
Query: 454 NYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE 513
+Y+T++S + S+ E E+ F R+ G N TY TLI + + K + +
Sbjct: 386 SYTTMLSAYVN-ASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEK 444
Query: 514 MIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 573
M S + ++ T ++ + A ++EM G P+ L+ D
Sbjct: 445 MRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDE 504
Query: 574 IDLATQL 580
++ A +L
Sbjct: 505 LEEAKEL 511
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 128/312 (41%), Gaps = 10/312 (3%)
Query: 133 PHHSVLVFNVLIKVFASNSMLEHAHQVF---VSAKNVGLELHIRSCNFLLKCLXXXXXXX 189
P S + + +++K F + A +VF + K L+ + + ++
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 190 XXXXXXXXLMETGPLPNIHTYTIMMSC-GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGL 248
++ G + TY +MS + ++I ++ RS P VV+Y I+
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAY 324
Query: 249 CECGYVDVAHKLVRK-LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 307
+ A + + L + P + +N ++ F G V +A V + M+ R FPD
Sbjct: 325 GRARREEEALSVFEEMLDAGVRPTH-KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPD 383
Query: 308 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSL 367
++SY +L+A+ D+ +P+IV Y +LI K K + +K +
Sbjct: 384 LWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLI---KGYAKANDV-EKMM 439
Query: 368 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
EVY M + I+ N I I+ R F AL ++ G+ +Q + N ++ +
Sbjct: 440 EVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLA 499
Query: 428 CKESYPKMALEL 439
+ + A EL
Sbjct: 500 STQDELEEAKEL 511
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/248 (20%), Positives = 96/248 (38%), Gaps = 21/248 (8%)
Query: 90 FRIIIHTFAMAGMHLEVFALLRDIVG------------YCKCDDSFEQFSTLLDLPHHS- 136
+ ++I+ + AG + + + +VG + S+++ S + D S
Sbjct: 250 YHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSD 309
Query: 137 ----VLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXX 192
V+ + +LIK + E A VF + G+ ++ N LL
Sbjct: 310 IQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAK 369
Query: 193 XXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGL 248
+ P++ +YT M+S D+ A + +I G P +VTYGT I+G
Sbjct: 370 TVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGY 429
Query: 249 CECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDV 308
+ V+ ++ K+ N ++ + AL +EM+S PD
Sbjct: 430 AKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQ 489
Query: 309 YSYNMLLN 316
+ N+LL+
Sbjct: 490 KAKNVLLS 497
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 154/323 (47%), Gaps = 18/323 (5%)
Query: 313 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNS 372
ML+ A+ K G+ P++++YT+L+ ++ +G + + + ++
Sbjct: 151 MLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALM---ESYGRGGKC-NNAEAIFRR 206
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLE---DFHEQGINLNQYSYNEIIHMICK 429
M + P+ I IL+ +F+EA + E D + + +Q Y+ +I+M K
Sbjct: 207 MQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKK 266
Query: 430 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTK 489
+ A ++ M+ + V V Y++L+S +++++ V +++ ++ ++ I +
Sbjct: 267 AGNYEKARKVFSSMVGKGVPQSTVTYNSLMSF----ETSYKEVSKIYDQMQRSDIQPDVV 322
Query: 490 TYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM 549
+Y LI +GR R+ +A F EM+ + + P +Y L+ F + A +F+ M
Sbjct: 323 SYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM 382
Query: 550 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
R P+L++YT ++ + ++ A + F +K G P++VTY LI Y K +
Sbjct: 383 RRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDV 442
Query: 610 G------EKNKLFGEMKANCILL 626
EK +L G +KAN +L
Sbjct: 443 EKMMEVYEKMRLSG-IKANQTIL 464
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 158/328 (48%), Gaps = 11/328 (3%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
F +I + + G N A VL + + P+V SY L+ ++ + G
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 208
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML---QNAIRPNTIICNHILRVH 392
+PS + Y ++ K ++G + + ++ EV+ ++L ++ ++P+ + + ++ ++
Sbjct: 209 SSGPEPSAITYQ---IILKTFVEGDK-FKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 264
Query: 393 CREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGV 452
+ G + +A + +G+ + +YN + M + SY +++ ++ +M + ++ P V
Sbjct: 265 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSL--MSFETSYKEVS-KIYDQMQRSDIQPDV 321
Query: 453 VNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFG 512
V+Y+ LI + + + E + +F ++ AG+ K Y L+ + +A F
Sbjct: 322 VSYALLIKAYGRARREEEALS-VFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFK 380
Query: 513 EMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 572
M + + PD SYT +++ + N +M A F+ + G PN+ TY LI G+ K +
Sbjct: 381 SMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKAN 440
Query: 573 YIDLATQLFDEMKRKGIFPDVVTYTVLI 600
++ +++++M+ GI + T ++
Sbjct: 441 DVEKMMEVYEKMRLSGIKANQTILTTIM 468
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/367 (19%), Positives = 151/367 (41%), Gaps = 11/367 (2%)
Query: 217 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 276
G+ A +L + + G P V++Y + G + A + R++ ++ +
Sbjct: 160 GNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITY 219
Query: 277 NAVIHGFCQRGAVNEALEVLEEM---KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXX 333
++ F + EA EV E + K S PD Y+M++ + K G+
Sbjct: 220 QIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSS 279
Query: 334 XXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 393
+ S V Y SL+ + Y + ++Y+ M ++ I+P+ + +++ +
Sbjct: 280 MVGKGVPQSTVTYNSLMSF-------ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYG 332
Query: 394 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 453
R + EAL++ E+ + G+ +YN ++ + A + M + + P +
Sbjct: 333 RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLW 392
Query: 454 NYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE 513
+Y+T++S + S+ E E+ F R+ G N TY TLI + + K + +
Sbjct: 393 SYTTMLSAYVN-ASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEK 451
Query: 514 MIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 573
M S + ++ T ++ + A ++EM G P+ L+ D
Sbjct: 452 MRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDE 511
Query: 574 IDLATQL 580
++ A +L
Sbjct: 512 LEEAKEL 518
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 128/312 (41%), Gaps = 10/312 (3%)
Query: 133 PHHSVLVFNVLIKVFASNSMLEHAHQVF---VSAKNVGLELHIRSCNFLLKCLXXXXXXX 189
P S + + +++K F + A +VF + K L+ + + ++
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 190 XXXXXXXXLMETGPLPNIHTYTIMMSC-GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGL 248
++ G + TY +MS + ++I ++ RS P VV+Y I+
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAY 331
Query: 249 CECGYVDVAHKLVRK-LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 307
+ A + + L + P + +N ++ F G V +A V + M+ R FPD
Sbjct: 332 GRARREEEALSVFEEMLDAGVRPTH-KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPD 390
Query: 308 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSL 367
++SY +L+A+ D+ +P+IV Y +LI K K + +K +
Sbjct: 391 LWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLI---KGYAKANDV-EKMM 446
Query: 368 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
EVY M + I+ N I I+ R F AL ++ G+ +Q + N ++ +
Sbjct: 447 EVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLA 506
Query: 428 CKESYPKMALEL 439
+ + A EL
Sbjct: 507 STQDELEEAKEL 518
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 82/206 (39%), Gaps = 9/206 (4%)
Query: 120 DDSFEQFSTLLDLPHHS-----VLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRS 174
+ S+++ S + D S V+ + +LIK + E A VF + G+ ++
Sbjct: 299 ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKA 358
Query: 175 CNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIY 230
N LL + P++ +YT M+S D+ A + +I
Sbjct: 359 YNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIK 418
Query: 231 RSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVN 290
G P +VTYGT I+G + V+ ++ K+ N ++ +
Sbjct: 419 VDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFG 478
Query: 291 EALEVLEEMKSSRTFPDVYSYNMLLN 316
AL +EM+S PD + N+LL+
Sbjct: 479 SALGWYKEMESCGVPPDQKAKNVLLS 504
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 153/388 (39%), Gaps = 51/388 (13%)
Query: 235 NPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQR-GAVNEAL 293
+P+ Y T + L E +++A K + + P N +I C+ G V+ L
Sbjct: 118 DPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGL 177
Query: 294 EVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLC 353
++ EM PD Y+Y L++ C+ G +
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRI----------------------------- 208
Query: 354 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 413
D++ +++ M++ P + ++ C EA+ LE+ +GI
Sbjct: 209 ----------DEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGI 258
Query: 414 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 473
N ++Y+ ++ +CK+ A+EL M+ R P +V Y+TLI+G KEQ E VE
Sbjct: 259 EPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVE 318
Query: 474 RLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVF 533
L R+ G+ + Y +IS K +A EMI + P+ +++ I V
Sbjct: 319 -LLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWN--IHVK 375
Query: 534 CNIREMNVACA--------LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 585
+ + CA L+ M G + T L+ CK A QL DE+
Sbjct: 376 TSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIV 435
Query: 586 RKGIFPDVVTYTVLIAWYHKHGRIGEKN 613
G P T+ +LI +GE +
Sbjct: 436 TDGCIPSKGTWKLLIGHTLDKTIVGEAS 463
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 135/289 (46%), Gaps = 6/289 (2%)
Query: 342 SIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREA 401
S Y L L+ NK K + +++ N ++ I + IC RVH + ++
Sbjct: 52 SSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLS--ICRGYGRVH----RPFDS 105
Query: 402 LTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISG 461
L + + + +Q +Y ++ ++ +E+ +A + M + + P V + + LI
Sbjct: 106 LRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKA 165
Query: 462 FAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCP 521
+ + ++F + K G ++ TY TLIS R + +A F EM++ P
Sbjct: 166 LCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAP 225
Query: 522 DEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLF 581
V+YT+LI C + ++ A +EM G PN++TY+ L+DG CK A +LF
Sbjct: 226 TVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELF 285
Query: 582 DEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 630
+ M +G P++VTYT LI K +I E +L M + D G+
Sbjct: 286 EMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGL 334
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 3/283 (1%)
Query: 338 QIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQ 397
+I+ +V+ L+ +C+ + + +D SL V++ M P+ +L + E Q
Sbjct: 78 KIENCVVSEDILLSICRGYGRVHRPFD-SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQ 136
Query: 398 FREALTLLEDFHEQGINLNQYSYNEIIHMICK-ESYPKMALELMPRMLKRNVLPGVVNYS 456
A ++ E G+ S N +I +C+ + L++ M KR P Y
Sbjct: 137 LNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYG 196
Query: 457 TLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQ 516
TLISG + + ++LFT +V+ TYT+LI+ ++ +A EM
Sbjct: 197 TLISGLCR-FGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKS 255
Query: 517 SCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDL 576
+ P+ +Y++L+ C A LF+ M GC PN+ TYT LI G CK I
Sbjct: 256 KGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQE 315
Query: 577 ATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
A +L D M +G+ PD Y +I+ + + E EM
Sbjct: 316 AVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEM 358
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 154/389 (39%), Gaps = 54/389 (13%)
Query: 121 DSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLL 179
DS F + D S + ++ + + L A + + + + +GL + S N L+
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163
Query: 180 KCLXXXXXXXXXXXXXXXLM-ETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGG 234
K L M + G P+ +TY ++S G I A ++ ++
Sbjct: 164 KALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223
Query: 235 NPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE 294
PTVVTY + I GLC VD A + + ++ K N +++++ G C+ G +A+E
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 295 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 354
+ E M + P++ +Y L+ CK
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCK---------------------------------- 309
Query: 355 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 414
+Q +++E+ + M ++P+ + ++ C +FREA L++ GI
Sbjct: 310 -----EQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGIT 364
Query: 415 LNQYSY-------NEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS 467
N+ ++ NE++ +C +YP A L M R + V +L+ K +
Sbjct: 365 PNRLTWNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSRGISVEVETLESLVKCLCK-KG 422
Query: 468 NFEMVERLFTRLVKAGITFNTKTYTTLIS 496
F+ +L +V G + T+ LI
Sbjct: 423 EFQKAVQLVDEIVTDGCIPSKGTWKLLIG 451
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 116/252 (46%), Gaps = 2/252 (0%)
Query: 369 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 428
+Y ML++ + P+ N ++ +C+ G EA + + G + + ++Y I C
Sbjct: 142 LYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHC 201
Query: 429 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNT 488
+ A ++ M + V+Y+ LI G E + L ++ N
Sbjct: 202 RRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLF-EAKKIDEALSLLVKMKDDNCCPNV 260
Query: 489 KTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQE 548
+TYT LI + ++ +A F +M +S + PD+ YT LI FC+ ++ A L +
Sbjct: 261 RTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEH 320
Query: 549 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 608
M G +PN+ TY LI GFCK + + A L +M + + PD++TY LIA G
Sbjct: 321 MLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGN 379
Query: 609 IGEKNKLFGEMK 620
+ +L M+
Sbjct: 380 LDSAYRLLSLME 391
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 128/324 (39%), Gaps = 41/324 (12%)
Query: 269 HPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXX 328
+ L C+N ++ + G V E + EM PD+Y++N L+N +CK G V
Sbjct: 116 YKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAK 175
Query: 329 XXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHI 388
P YTS I
Sbjct: 176 QYVTWLIQAGCDPDYFTYTSFI-------------------------------------- 197
Query: 389 LRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV 448
HCR + A + ++ + G + N+ SY ++I+ + + AL L+ +M N
Sbjct: 198 -TGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNC 256
Query: 449 LPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAY 508
P V Y+ LI E + LF ++ ++GI + YT LI +A
Sbjct: 257 CPNVRTYTVLIDALCGSGQKSEAM-NLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEAS 315
Query: 509 CRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGF 568
M+++ L P+ ++Y ALI FC + ++ A L +M +P+L TY LI G
Sbjct: 316 GLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQ 374
Query: 569 CKIDYIDLATQLFDEMKRKGIFPD 592
C +D A +L M+ G+ P+
Sbjct: 375 CSSGNLDSAYRLLSLMEESGLVPN 398
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 104/219 (47%), Gaps = 1/219 (0%)
Query: 407 DFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ 466
D E L YN ++ + + + L ML+ V P + ++TL++G+ K
Sbjct: 110 DSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLG 169
Query: 467 SNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSY 526
E ++ T L++AG + TYT+ I+ H R ++ A+ F EM Q+ +EVSY
Sbjct: 170 YVVE-AKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSY 228
Query: 527 TALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 586
T LI ++++ A +L +M C PN+ TYT LID C A LF +M
Sbjct: 229 TQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSE 288
Query: 587 KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 625
GI PD YTVLI + + E + L M N ++
Sbjct: 289 SGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLM 327
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 111/236 (47%), Gaps = 4/236 (1%)
Query: 386 NHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLK 445
N++L R G E L + E ++ + Y++N +++ CK Y A + + +++
Sbjct: 124 NNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQ 183
Query: 446 RNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRH 505
P Y++ I+G + + + ++F + + G N +YT LI +K
Sbjct: 184 AGCDPDYFTYTSFITGHCRRKE-VDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 506 KAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLI 565
+A +M CP+ +YT LI C + + A LF++MS G P+ YT LI
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 566 DGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHK---HGRIGEKNKLFGE 618
FC D +D A+ L + M G+ P+V+TY LI + K H +G +K+ +
Sbjct: 303 QSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMGLLSKMLEQ 358
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 137/323 (42%), Gaps = 16/323 (4%)
Query: 211 TIMM--SCGDIRLAAEILG--KIYRSGGN------PTVVTYGTYIRGLCECGYVDVAHKL 260
TI+M SC +R A ++ + R G + T Y + L G V+ +L
Sbjct: 83 TILMIKSCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRL 142
Query: 261 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 320
++ L + + FN +++G+C+ G V EA + + + + PD ++Y + C+
Sbjct: 143 YTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCR 202
Query: 321 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 380
+ +V + V+YT LI L + D++L + M + P
Sbjct: 203 RKEVDAAFKVFKEMTQNGCHRNEVSYTQLIY----GLFEAKKIDEALSLLVKMKDDNCCP 258
Query: 381 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
N ++ C GQ EA+ L + E GI + Y +I C A L+
Sbjct: 259 NVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLL 318
Query: 441 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGR 500
ML+ ++P V+ Y+ LI GF K+ N L +++++ + + TY TLI+
Sbjct: 319 EHMLENGLMPNVITYNALIKGFCKK--NVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCS 376
Query: 501 TRKRHKAYCRFGEMIQSCLCPDE 523
+ AY M +S L P++
Sbjct: 377 SGNLDSAYRLLSLMEESGLVPNQ 399
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 92/177 (51%), Gaps = 7/177 (3%)
Query: 455 YSTLISGFAKEQSNFEMVE---RLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRF 511
Y+ L+S A+ F +VE RL+T +++ ++ + T+ TL++ + + +A
Sbjct: 123 YNNLLSSLAR----FGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYV 178
Query: 512 GEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKI 571
+IQ+ PD +YT+ I C +E++ A +F+EM++ GC N +YT LI G +
Sbjct: 179 TWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEA 238
Query: 572 DYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 628
ID A L +MK P+V TYTVLI G+ E LF +M + I DD
Sbjct: 239 KKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDD 295
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 109/518 (21%), Positives = 208/518 (40%), Gaps = 58/518 (11%)
Query: 154 EHAHQVFVSAKNVG-LELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTI 212
E A ++F K+ G EL++ N +L+ L ++ G P TY
Sbjct: 168 ERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGT 227
Query: 213 MM---SCGDIRLAAE-ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKL 268
++ S G +++ A LGK+ + G P VT G ++ + A + +K C
Sbjct: 228 LIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDE 287
Query: 269 HPLNSH------CFNAVIHGFCQRGAVNEALEVLEEM------KSSRTF----------- 305
+ +SH +N +I + + G + EA E + M ++ TF
Sbjct: 288 NKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNG 347
Query: 306 -----------------PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTS 348
PD +YN+L++ K D+ +KP V+Y +
Sbjct: 348 QLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRT 407
Query: 349 LILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 408
L+ + + +++ + M + + + + + R++ ++ + + F
Sbjct: 408 LLY----AFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRF 463
Query: 409 HEQGINLNQYSYNEIIHMICKESYPKMALELM---PRMLKRNVLPGVVNYSTLISGFAKE 465
H G N++ Y+ I + Y A + + KR V + Y+ +I +
Sbjct: 464 HVAG-NMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTV----IEYNVMIKAYGIS 518
Query: 466 QSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVS 525
+S + E LF ++ G+T + TY TL+ I HK C +M ++ D +
Sbjct: 519 KSCEKACE-LFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIP 577
Query: 526 YTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 585
Y A+I+ F + ++N+A +++EM P++ Y LI+ F + A + MK
Sbjct: 578 YCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMK 637
Query: 586 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANC 623
GI + V Y LI Y K G + E ++ ++ +C
Sbjct: 638 EAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSC 675
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 106/507 (20%), Positives = 206/507 (40%), Gaps = 30/507 (5%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
S +N +I + + ++ A + F LE I +
Sbjct: 297 SSYTYNTMIDTYGKSGQIKEASETFKRM----LEEGIVPTTVTFNTMIHIYGNNGQLGEV 352
Query: 196 XXLMETGPL---PNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGL 248
LM+T L P+ TY I++S DI A ++ G P V+Y T +
Sbjct: 353 TSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAF 412
Query: 249 CECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMK-SSRTFPD 307
V+ A L+ ++ ++ + +A+ + + + ++ + + +
Sbjct: 413 SIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSE 472
Query: 308 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQI--KPSIVNYTSLILLCKNKLKG-QQLYD 364
YS N ++A+ ++G CQ K +++ Y +I K G + +
Sbjct: 473 GYSAN--IDAYGERG---YLSEAERVFICCQEVNKRTVIEYNVMI-----KAYGISKSCE 522
Query: 365 KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEII 424
K+ E++ SM+ + P+ N ++++ + LE E G + Y +I
Sbjct: 523 KACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVI 582
Query: 425 HMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGI 484
K MA E+ M++ N+ P VV Y LI+ FA + N + + +AGI
Sbjct: 583 SSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFA-DTGNVQQAMSYVEAMKEAGI 641
Query: 485 TFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSC---LCPDEVSYTALIAVFCNIREMNV 541
N+ Y +LI ++ + +A + +++QSC PD + +I ++ +
Sbjct: 642 PGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRK 701
Query: 542 ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 601
A A+F M + G N +T+ ++ + K + ATQ+ +M+ I D ++Y ++
Sbjct: 702 AEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLG 760
Query: 602 WYHKHGRIGEKNKLFGEMKANCILLDD 628
+ GR E + F EM ++ I DD
Sbjct: 761 LFALDGRFKEAVETFKEMVSSGIQPDD 787
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 128/279 (45%), Gaps = 9/279 (3%)
Query: 357 LKGQQLYDKSLEVYNSMLQNA-IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 415
LK Q +++++E++ N I N +LR+ + ++R +L ++ +GI
Sbjct: 161 LKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKP 220
Query: 416 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 475
+Y +I + K AL + +M K + P V ++ + K + F+ E
Sbjct: 221 INSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAR-EFQKAEEF 279
Query: 476 FTRL------VKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTAL 529
F + + + ++ TY T+I +G++ + +A F M++ + P V++ +
Sbjct: 280 FKKWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTM 339
Query: 530 IAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 589
I ++ N ++ +L + M ++ C P+ TY LI K + I+ A F EMK G+
Sbjct: 340 IHIYGNNGQLGEVTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGL 398
Query: 590 FPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 628
PD V+Y L+ + + E L EM + + +D+
Sbjct: 399 KPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDE 437
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/339 (20%), Positives = 150/339 (44%), Gaps = 12/339 (3%)
Query: 131 DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXX 190
++ +V+ +NV+IK + + E A ++F S + G+ + N L++ L
Sbjct: 499 EVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHK 558
Query: 191 XXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIR 246
+ ETG + + Y ++S G + +A E+ ++ P VV YG I
Sbjct: 559 GRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLIN 618
Query: 247 GLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSS---R 303
+ G V A V + P NS +N++I + + G ++EA + ++ S
Sbjct: 619 AFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKT 678
Query: 304 TFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLY 363
+PDVY+ N ++N + ++ V + + +T ++LC K G+ +
Sbjct: 679 QYPDVYTSNCMINLYSERSMVRKAEAIFDSM---KQRGEANEFTFAMMLCMYKKNGR--F 733
Query: 364 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 423
+++ ++ M + I + + N +L + +G+F+EA+ ++ GI + ++ +
Sbjct: 734 EEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
Query: 424 IHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 462
++ K K A+ + + K+ + G+ + + +S
Sbjct: 794 GTILMKLGMSKKAVRKIEEIRKKEIKRGLELWISTLSSL 832
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 103/512 (20%), Positives = 202/512 (39%), Gaps = 41/512 (8%)
Query: 90 FRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFAS 149
F +IH + G EV +L++ + +C D +N+LI +
Sbjct: 336 FNTMIHIYGNNGQLGEVTSLMKTMKLHCAPD----------------TRTYNILISLHTK 379
Query: 150 NSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHT 209
N+ +E A F K+ GL+ S LL + + + +T
Sbjct: 380 NNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYT 439
Query: 210 YTIMMSCGDIRLAAEILGKIYRS------GGNPTVVTYGTYIRGLCECGYVDVAHKLVRK 263
+ + + + AE+L K + GN + Y I E GY+ A ++
Sbjct: 440 QSALTR---MYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVF-- 494
Query: 264 LHCKLHPLNSHC---FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 320
+ C+ +N +N +I + + +A E+ E M S PD +YN L+
Sbjct: 495 ICCQ--EVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILAS 552
Query: 321 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 380
+ Y ++I + +K QL + + EVY M++ I P
Sbjct: 553 ADMPHKGRCYLEKMRETGYVSDCIPYCAVI---SSFVKLGQL-NMAEEVYKEMVEYNIEP 608
Query: 381 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
+ ++ ++ G ++A++ +E E GI N YN +I + K Y A +
Sbjct: 609 DVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIY 668
Query: 441 PRMLK---RNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISI 497
++L+ + P V + +I+ ++ E+S E +F + + G N T+ ++ +
Sbjct: 669 RKLLQSCNKTQYPDVYTSNCMINLYS-ERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCM 726
Query: 498 HGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPN 557
+ + + +A +M + + D +SY +++ +F A F+EM G P+
Sbjct: 727 YKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPD 786
Query: 558 LYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 589
T+ L K+ A + +E+++K I
Sbjct: 787 DSTFKSLGTILMKLGMSKKAVRKIEEIRKKEI 818
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 121/254 (47%), Gaps = 1/254 (0%)
Query: 368 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
++ + M+++ +PNT+ N ++ + R EA+ + E G ++ +Y +I +
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 428 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFN 487
K + +A+++ RM + P YS +I+ K + +LF +V G T N
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA-GHLPAAHKLFCEMVDQGCTPN 503
Query: 488 TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQ 547
TY ++ +H + R A + +M + PD+V+Y+ ++ V + + A A+F
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 548 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 607
EM + +P+ Y L+D + K ++ A Q + M G+ P+V T L++ + +
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 608 RIGEKNKLFGEMKA 621
+I E +L M A
Sbjct: 624 KIAEAYELLQNMLA 637
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 126/263 (47%), Gaps = 7/263 (2%)
Query: 340 KPSIVNYTSLILLCKNKLKGQQLY-DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 398
+P+ V Y LI G+ Y ++++ V+N M + +P+ + ++ +H + G
Sbjct: 396 QPNTVTYNRLI-----HSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL 450
Query: 399 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 458
A+ + + G++ + ++Y+ II+ + K + A +L M+ + P +V Y+ +
Sbjct: 451 DIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIM 510
Query: 459 ISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSC 518
+ AK + N++ +L+ + AG + TY+ ++ + G +A F EM Q
Sbjct: 511 MDLHAKAR-NYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 519 LCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLAT 578
PDE Y L+ ++ + A +Q M G PN+ T L+ F +++ I A
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 579 QLFDEMKRKGIFPDVVTYTVLIA 601
+L M G+ P + TYT+L++
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLS 652
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 106/226 (46%), Gaps = 1/226 (0%)
Query: 394 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 453
R QF LL++ G N +YN +IH + +Y A+ + +M + P V
Sbjct: 376 RAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 454 NYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE 513
Y TLI AK ++ ++ R+ G++ +T TY+ +I+ G+ A+ F E
Sbjct: 436 TYCTLIDIHAKA-GFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 514 MIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 573
M+ P+ V+Y ++ + R A L+++M G P+ TY+ +++ Y
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 574 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
++ A +F EM++K PD Y +L+ + K G + + + + M
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 11/228 (4%)
Query: 397 QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN-- 454
+FR E G+ ++ Y N+++ + Y AL LKR PG +
Sbjct: 311 RFRWGPAAEEALQNLGLRIDAYQANQVLKQM--NDYGN-ALGFF-YWLKRQ--PGFKHDG 364
Query: 455 --YSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFG 512
Y+T++ + + F + +L +V+ G NT TY LI +GR ++A F
Sbjct: 365 HTYTTMVGNLGRAK-QFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFN 423
Query: 513 EMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 572
+M ++ PD V+Y LI + +++A ++Q M G P+ +TY+ +I+ K
Sbjct: 424 QMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483
Query: 573 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
++ A +LF EM +G P++VTY +++ + K KL+ +M+
Sbjct: 484 HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 100/224 (44%), Gaps = 1/224 (0%)
Query: 410 EQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNF 469
+ G + ++Y ++ + + +L+ M++ P V Y+ LI + +
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 470 EMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTAL 529
E + +F ++ +AG + TY TLI IH + A + M L PD +Y+ +
Sbjct: 417 EAMN-VFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVI 475
Query: 530 IAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 589
I + A LF EM GC PNL TY ++D K A +L+ +M+ G
Sbjct: 476 INCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGF 535
Query: 590 FPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKL 633
PD VTY++++ G + E +F EM+ + D+ + L
Sbjct: 536 EPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGL 579
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 135/342 (39%), Gaps = 54/342 (15%)
Query: 240 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 299
TY T + L +KL+ ++ N+ +N +IH + + +NEA+ V +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 300 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 359
+ + PD +Y L++ K G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAG------------------------------------- 448
Query: 360 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 419
D ++++Y M + P+T + I+ + G A L + +QG N +
Sbjct: 449 --FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVT 506
Query: 420 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS-----GFAKEQSNFEMVER 474
YN ++ + K + AL+L M P V YS ++ G+ +E E
Sbjct: 507 YNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE------AEA 560
Query: 475 LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFC 534
+FT + + + Y L+ + G+ KA+ + M+ + L P+ + +L++ F
Sbjct: 561 VFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL 620
Query: 535 NIREMNVACALFQEMSRIGCLPNLYTYT----CLIDGFCKID 572
+ ++ A L Q M +G P+L TYT C DG K+D
Sbjct: 621 RVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLD 662
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 131/330 (39%), Gaps = 48/330 (14%)
Query: 208 HTYTIMMSCGDIRLAAE------ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
HTYT M+ G++ A + +L ++ R G P VTY
Sbjct: 365 HTYTTMV--GNLGRAKQFGAINKLLDEMVRDGCQPNTVTY-------------------- 402
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
N +IH + + +NEA+ V +M+ + PD +Y L++ K
Sbjct: 403 ---------------NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKA 447
Query: 322 GDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 381
G + + P Y S+I+ C K K ++ M+ PN
Sbjct: 448 GFLDIAMDMYQRMQAGGLSPDTFTY-SVIINCLGKAGHLPAAHK---LFCEMVDQGCTPN 503
Query: 382 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMP 441
+ N ++ +H + ++ AL L D G ++ +Y+ ++ ++ Y + A +
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 442 RMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRT 501
M ++N +P Y L+ + K N E + + ++ AG+ N T +L+S R
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKA-GNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 502 RKRHKAYCRFGEMIQSCLCPDEVSYTALIA 531
K +AY M+ L P +YT L++
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 91/222 (40%), Gaps = 4/222 (1%)
Query: 138 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 197
+ + LI + A L+ A ++ + GL + + ++ CL
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 198 LMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYR----SGGNPTVVTYGTYIRGLCECGY 253
+++ G PN+ TY IMM + K+YR +G P VTY + L CGY
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
++ A + ++ K + + ++ + + G V +A + + M + P+V + N
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 355
LL+ F + + ++PS+ YT L+ C +
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTD 656
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 121/254 (47%), Gaps = 1/254 (0%)
Query: 368 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
++ + M+++ +PNT+ N ++ + R EA+ + E G ++ +Y +I +
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 428 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFN 487
K + +A+++ RM + P YS +I+ K + +LF +V G T N
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA-GHLPAAHKLFCEMVDQGCTPN 503
Query: 488 TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQ 547
TY ++ +H + R A + +M + PD+V+Y+ ++ V + + A A+F
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 548 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 607
EM + +P+ Y L+D + K ++ A Q + M G+ P+V T L++ + +
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 608 RIGEKNKLFGEMKA 621
+I E +L M A
Sbjct: 624 KIAEAYELLQNMLA 637
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 126/263 (47%), Gaps = 7/263 (2%)
Query: 340 KPSIVNYTSLILLCKNKLKGQQLY-DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 398
+P+ V Y LI G+ Y ++++ V+N M + +P+ + ++ +H + G
Sbjct: 396 QPNTVTYNRLI-----HSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL 450
Query: 399 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 458
A+ + + G++ + ++Y+ II+ + K + A +L M+ + P +V Y+ +
Sbjct: 451 DIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIM 510
Query: 459 ISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSC 518
+ AK + N++ +L+ + AG + TY+ ++ + G +A F EM Q
Sbjct: 511 MDLHAKAR-NYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 519 LCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLAT 578
PDE Y L+ ++ + A +Q M G PN+ T L+ F +++ I A
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 579 QLFDEMKRKGIFPDVVTYTVLIA 601
+L M G+ P + TYT+L++
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLS 652
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 106/226 (46%), Gaps = 1/226 (0%)
Query: 394 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 453
R QF LL++ G N +YN +IH + +Y A+ + +M + P V
Sbjct: 376 RAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 454 NYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE 513
Y TLI AK ++ ++ R+ G++ +T TY+ +I+ G+ A+ F E
Sbjct: 436 TYCTLIDIHAKA-GFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 514 MIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 573
M+ P+ V+Y ++ + R A L+++M G P+ TY+ +++ Y
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 574 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
++ A +F EM++K PD Y +L+ + K G + + + + M
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 11/228 (4%)
Query: 397 QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN-- 454
+FR E G+ ++ Y N+++ + Y AL LKR PG +
Sbjct: 311 RFRWGPAAEEALQNLGLRIDAYQANQVLKQM--NDYGN-ALGFF-YWLKRQ--PGFKHDG 364
Query: 455 --YSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFG 512
Y+T++ + + F + +L +V+ G NT TY LI +GR ++A F
Sbjct: 365 HTYTTMVGNLGRAK-QFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFN 423
Query: 513 EMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 572
+M ++ PD V+Y LI + +++A ++Q M G P+ +TY+ +I+ K
Sbjct: 424 QMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483
Query: 573 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
++ A +LF EM +G P++VTY +++ + K KL+ +M+
Sbjct: 484 HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 6/262 (2%)
Query: 374 LQN-AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ-GINLNQYSYNEIIHMICKES 431
LQN +R + N +L+ + + AL Q G + ++Y ++ + +
Sbjct: 322 LQNLGLRIDAYQANQVLK---QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK 378
Query: 432 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
+L+ M++ P V Y+ LI + + E + +F ++ +AG + TY
Sbjct: 379 QFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN-VFNQMQEAGCKPDRVTY 437
Query: 492 TTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR 551
TLI IH + A + M L PD +Y+ +I + A LF EM
Sbjct: 438 CTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVD 497
Query: 552 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
GC PNL TY ++D K A +L+ +M+ G PD VTY++++ G + E
Sbjct: 498 QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 557
Query: 612 KNKLFGEMKANCILLDDGIKKL 633
+F EM+ + D+ + L
Sbjct: 558 AEAVFTEMQQKNWIPDEPVYGL 579
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 135/342 (39%), Gaps = 54/342 (15%)
Query: 240 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 299
TY T + L +KL+ ++ N+ +N +IH + + +NEA+ V +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 300 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 359
+ + PD +Y L++ K G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAG------------------------------------- 448
Query: 360 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 419
D ++++Y M + P+T + I+ + G A L + +QG N +
Sbjct: 449 --FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVT 506
Query: 420 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS-----GFAKEQSNFEMVER 474
YN ++ + K + AL+L M P V YS ++ G+ +E E
Sbjct: 507 YNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE------AEA 560
Query: 475 LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFC 534
+FT + + + Y L+ + G+ KA+ + M+ + L P+ + +L++ F
Sbjct: 561 VFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL 620
Query: 535 NIREMNVACALFQEMSRIGCLPNLYTYT----CLIDGFCKID 572
+ ++ A L Q M +G P+L TYT C DG K+D
Sbjct: 621 RVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLD 662
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 131/330 (39%), Gaps = 48/330 (14%)
Query: 208 HTYTIMMSCGDIRLAAE------ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
HTYT M+ G++ A + +L ++ R G P VTY
Sbjct: 365 HTYTTMV--GNLGRAKQFGAINKLLDEMVRDGCQPNTVTY-------------------- 402
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
N +IH + + +NEA+ V +M+ + PD +Y L++ K
Sbjct: 403 ---------------NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKA 447
Query: 322 GDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 381
G + + P Y S+I+ C K K ++ M+ PN
Sbjct: 448 GFLDIAMDMYQRMQAGGLSPDTFTY-SVIINCLGKAGHLPAAHK---LFCEMVDQGCTPN 503
Query: 382 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMP 441
+ N ++ +H + ++ AL L D G ++ +Y+ ++ ++ Y + A +
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 442 RMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRT 501
M ++N +P Y L+ + K N E + + ++ AG+ N T +L+S R
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKA-GNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 502 RKRHKAYCRFGEMIQSCLCPDEVSYTALIA 531
K +AY M+ L P +YT L++
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 4/218 (1%)
Query: 142 VLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMET 201
LI + A L+ A ++ + GL + + ++ CL +++
Sbjct: 439 TLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
Query: 202 GPLPNIHTYTIMMSCGDIRLAAEILGKIYR----SGGNPTVVTYGTYIRGLCECGYVDVA 257
G PN+ TY IMM + K+YR +G P VTY + L CGY++ A
Sbjct: 499 GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
+ ++ K + + ++ + + G V +A + + M + P+V + N LL+
Sbjct: 559 EAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Query: 318 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 355
F + + ++PS+ YT L+ C +
Sbjct: 619 FLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTD 656
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/254 (24%), Positives = 121/254 (47%), Gaps = 1/254 (0%)
Query: 368 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
++ + M+++ +PNT+ N ++ + R EA+ + E G ++ +Y +I +
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 428 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFN 487
K + +A+++ RM + P YS +I+ K + +LF +V G T N
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKA-GHLPAAHKLFCEMVDQGCTPN 503
Query: 488 TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQ 547
TY ++ +H + R A + +M + PD+V+Y+ ++ V + + A A+F
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 548 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 607
EM + +P+ Y L+D + K ++ A Q + M G+ P+V T L++ + +
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVN 623
Query: 608 RIGEKNKLFGEMKA 621
+I E +L M A
Sbjct: 624 KIAEAYELLQNMLA 637
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 126/263 (47%), Gaps = 7/263 (2%)
Query: 340 KPSIVNYTSLILLCKNKLKGQQLY-DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 398
+P+ V Y LI G+ Y ++++ V+N M + +P+ + ++ +H + G
Sbjct: 396 QPNTVTYNRLI-----HSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL 450
Query: 399 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 458
A+ + + G++ + ++Y+ II+ + K + A +L M+ + P +V Y+ +
Sbjct: 451 DIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIM 510
Query: 459 ISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSC 518
+ AK + N++ +L+ + AG + TY+ ++ + G +A F EM Q
Sbjct: 511 MDLHAKAR-NYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKN 569
Query: 519 LCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLAT 578
PDE Y L+ ++ + A +Q M G PN+ T L+ F +++ I A
Sbjct: 570 WIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAY 629
Query: 579 QLFDEMKRKGIFPDVVTYTVLIA 601
+L M G+ P + TYT+L++
Sbjct: 630 ELLQNMLALGLRPSLQTYTLLLS 652
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 106/226 (46%), Gaps = 1/226 (0%)
Query: 394 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 453
R QF LL++ G N +YN +IH + +Y A+ + +M + P V
Sbjct: 376 RAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRV 435
Query: 454 NYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE 513
Y TLI AK ++ ++ R+ G++ +T TY+ +I+ G+ A+ F E
Sbjct: 436 TYCTLIDIHAKA-GFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 514 MIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 573
M+ P+ V+Y ++ + R A L+++M G P+ TY+ +++ Y
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 574 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
++ A +F EM++K PD Y +L+ + K G + + + + M
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 11/228 (4%)
Query: 397 QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN-- 454
+FR E G+ ++ Y N+++ + Y AL LKR PG +
Sbjct: 311 RFRWGPAAEEALQNLGLRIDAYQANQVLKQM--NDYGN-ALGFF-YWLKRQ--PGFKHDG 364
Query: 455 --YSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFG 512
Y+T++ + + F + +L +V+ G NT TY LI +GR ++A F
Sbjct: 365 HTYTTMVGNLGRAK-QFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFN 423
Query: 513 EMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 572
+M ++ PD V+Y LI + +++A ++Q M G P+ +TY+ +I+ K
Sbjct: 424 QMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAG 483
Query: 573 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
++ A +LF EM +G P++VTY +++ + K KL+ +M+
Sbjct: 484 HLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQ 531
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 114/262 (43%), Gaps = 6/262 (2%)
Query: 374 LQN-AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ-GINLNQYSYNEIIHMICKES 431
LQN +R + N +L+ + + AL Q G + ++Y ++ + +
Sbjct: 322 LQNLGLRIDAYQANQVLK---QMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAK 378
Query: 432 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
+L+ M++ P V Y+ LI + + E + +F ++ +AG + TY
Sbjct: 379 QFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN-VFNQMQEAGCKPDRVTY 437
Query: 492 TTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR 551
TLI IH + A + M L PD +Y+ +I + A LF EM
Sbjct: 438 CTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVD 497
Query: 552 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
GC PNL TY ++D K A +L+ +M+ G PD VTY++++ G + E
Sbjct: 498 QGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE 557
Query: 612 KNKLFGEMKANCILLDDGIKKL 633
+F EM+ + D+ + L
Sbjct: 558 AEAVFTEMQQKNWIPDEPVYGL 579
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 135/342 (39%), Gaps = 54/342 (15%)
Query: 240 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 299
TY T + L +KL+ ++ N+ +N +IH + + +NEA+ V +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 300 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 359
+ + PD +Y L++ K G
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAG------------------------------------- 448
Query: 360 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 419
D ++++Y M + P+T + I+ + G A L + +QG N +
Sbjct: 449 --FLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVT 506
Query: 420 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS-----GFAKEQSNFEMVER 474
YN ++ + K + AL+L M P V YS ++ G+ +E E
Sbjct: 507 YNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEE------AEA 560
Query: 475 LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFC 534
+FT + + + Y L+ + G+ KA+ + M+ + L P+ + +L++ F
Sbjct: 561 VFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFL 620
Query: 535 NIREMNVACALFQEMSRIGCLPNLYTYT----CLIDGFCKID 572
+ ++ A L Q M +G P+L TYT C DG K+D
Sbjct: 621 RVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTDGRSKLD 662
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 131/330 (39%), Gaps = 48/330 (14%)
Query: 208 HTYTIMMSCGDIRLAAE------ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
HTYT M+ G++ A + +L ++ R G P VTY
Sbjct: 365 HTYTTMV--GNLGRAKQFGAINKLLDEMVRDGCQPNTVTY-------------------- 402
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
N +IH + + +NEA+ V +M+ + PD +Y L++ K
Sbjct: 403 ---------------NRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKA 447
Query: 322 GDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 381
G + + P Y S+I+ C K K ++ M+ PN
Sbjct: 448 GFLDIAMDMYQRMQAGGLSPDTFTY-SVIINCLGKAGHLPAAHK---LFCEMVDQGCTPN 503
Query: 382 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMP 441
+ N ++ +H + ++ AL L D G ++ +Y+ ++ ++ Y + A +
Sbjct: 504 LVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFT 563
Query: 442 RMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRT 501
M ++N +P Y L+ + K N E + + ++ AG+ N T +L+S R
Sbjct: 564 EMQQKNWIPDEPVYGLLVDLWGKA-GNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRV 622
Query: 502 RKRHKAYCRFGEMIQSCLCPDEVSYTALIA 531
K +AY M+ L P +YT L++
Sbjct: 623 NKIAEAYELLQNMLALGLRPSLQTYTLLLS 652
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 89/218 (40%), Gaps = 4/218 (1%)
Query: 142 VLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMET 201
LI + A L+ A ++ + GL + + ++ CL +++
Sbjct: 439 TLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ 498
Query: 202 GPLPNIHTYTIMMSCGDIRLAAEILGKIYR----SGGNPTVVTYGTYIRGLCECGYVDVA 257
G PN+ TY IMM + K+YR +G P VTY + L CGY++ A
Sbjct: 499 GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
+ ++ K + + ++ + + G V +A + + M + P+V + N LL+
Sbjct: 559 EAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLST 618
Query: 318 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 355
F + + ++PS+ YT L+ C +
Sbjct: 619 FLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTD 656
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 147/363 (40%), Gaps = 51/363 (14%)
Query: 271 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 330
++S F V + + +EA M P V + LL++ C K V
Sbjct: 136 ISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEF 195
Query: 331 XXXXXXCQIKPSIVNYTSLILLCKNKLKG-QQLYDKS--LEVYNSMLQNAIRPNTIICNH 387
I PS Y+ L+ +G ++ D S +V++ ML+ + + N
Sbjct: 196 FGKAKGFGIVPSAKTYSILV-------RGWARIRDASGARKVFDEMLERNCVVDLLAYNA 248
Query: 388 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 447
+L C+ G + ++ G+ + YS+ IH C A +++ RM + +
Sbjct: 249 LLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYD 308
Query: 448 VLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKA 507
++P V ++ +I K + K A
Sbjct: 309 LVPNVYTFNHIIKTLCKNE------------------------------------KVDDA 332
Query: 508 YCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDG 567
Y EMIQ PD +Y +++A C+ E+N A L M R CLP+ +TY ++
Sbjct: 333 YLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKL 392
Query: 568 FCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
+I D AT++++ M + +P V TYTV+I HG + +K KL + +++D
Sbjct: 393 LIRIGRFDRATEIWEGMSERKFYPTVATYTVMI-----HGLVRKKGKLEEACRYFEMMID 447
Query: 628 DGI 630
+GI
Sbjct: 448 EGI 450
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 129/328 (39%), Gaps = 34/328 (10%)
Query: 52 ELFHVVVRVIKS-----LNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEV 106
E +H++V ++ S L W E + E + F S F I+ ++ A + E
Sbjct: 103 ESYHILVEILGSSKQFALLWDFLIEAR-----EYNYFEISSKVFWIVFRAYSRANLPSEA 157
Query: 107 FALLRDIV--GYCKCDDSFEQF-STLLDLPH-----------------HSVLVFNVLIKV 146
+V G C D +Q +L D H S +++L++
Sbjct: 158 CRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRG 217
Query: 147 FASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPN 206
+A A +VF + + + N LL L + G P+
Sbjct: 218 WARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPD 277
Query: 207 IHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVR 262
+++ I + GD+ A ++L ++ R P V T+ I+ LC+ VD A+ L+
Sbjct: 278 AYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLD 337
Query: 263 KLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKG 322
++ K ++ +N+++ C VN A ++L M ++ PD ++YNM+L + G
Sbjct: 338 EMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIG 397
Query: 323 DVXXXXXXXXXXXXCQIKPSIVNYTSLI 350
+ P++ YT +I
Sbjct: 398 RFDRATEIWEGMSERKFYPTVATYTVMI 425
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 129/611 (21%), Positives = 238/611 (38%), Gaps = 70/611 (11%)
Query: 46 VPETNRELFHVVVRVIKSLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLE 105
VPE + L + V+ K L + +F W E G +I H H++
Sbjct: 112 VPEWDHSLVYNVLHGAKKLEHAL----QFFRWTERSG---------LIRHD---RDTHMK 155
Query: 106 VFALLRDI--VGYCKCDDSFEQFSTLLDLPHHSVL----VFNVLIKVFASNSMLEHAHQV 159
+ +L ++ + + +C LLD+P V +F VLI+ + +++ + ++
Sbjct: 156 MIKMLGEVSKLNHARC--------ILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKI 207
Query: 160 FVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCGDI 219
F K++G+E I+S N L K + ++ G P HTY +M+ +
Sbjct: 208 FQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFL 267
Query: 220 RLAAEILGKIYRS----GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHC-KLHPLNSH 274
L E + + G +P T+ T I G C +D A KL ++ K+ P +
Sbjct: 268 SLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGP-SVV 326
Query: 275 CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 334
+ +I G+ V++ L + EEM+SS P+ +Y+ LL C G +
Sbjct: 327 SYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNM 386
Query: 335 XXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 394
I P N L LL G + EV +M + ++ C+
Sbjct: 387 MAKHIAPK-DNSIFLKLLVSQSKAGDMA--AATEVLKAMATLNVPAEAGHYGVLIENQCK 443
Query: 395 EGQFREALTLLEDF--------HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKR 446
+ A+ LL+ H+ + + +YN II +C A L +++KR
Sbjct: 444 ASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKR 503
Query: 447 NVLPGVVNYSTLISGFAKE---QSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRK 503
V + LI G AKE S++E+++ + R G+ + Y LI + +
Sbjct: 504 GVQDQDA-LNNLIRGHAKEGNPDSSYEILKIMSRR----GVPRESNAYELLIKSYMSKGE 558
Query: 504 RHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM--SRIGCLPNLYTY 561
A M++ PD + ++I + A + M +G N+
Sbjct: 559 PGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRVQTASRVMMIMIDKNVGIEDNMDLI 618
Query: 562 TCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 621
+++ +++ A D + + G D+ + +++ EK K +K
Sbjct: 619 AKILEALLMRGHVEEALGRIDLLNQNGHTADLDSLLSVLS---------EKGKTIAALK- 668
Query: 622 NCILLDDGIKK 632
LLD G+++
Sbjct: 669 ---LLDFGLER 676
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 119/259 (45%), Gaps = 4/259 (1%)
Query: 369 VYNSMLQNAIRPNTIICNHILRVHCREG--QFREALTLLEDFHEQG-INLNQYSYNEIIH 425
+ + LQN+IR +H L + G + AL G I ++ ++ ++I
Sbjct: 99 AWTTRLQNSIRDLVPEWDHSLVYNVLHGAKKLEHALQFFRWTERSGLIRHDRDTHMKMIK 158
Query: 426 MICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGIT 485
M+ + S A ++ M ++ V + LI + K E V ++F ++ G+
Sbjct: 159 MLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESV-KIFQKMKDLGVE 217
Query: 486 FNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACAL 545
K+Y +L + R + A F +M+ + P +Y ++ F + A
Sbjct: 218 RTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRF 277
Query: 546 FQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHK 605
F++M G P+ T+ +I+GFC+ +D A +LF EMK I P VV+YT +I Y
Sbjct: 278 FEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLA 337
Query: 606 HGRIGEKNKLFGEMKANCI 624
R+ + ++F EM+++ I
Sbjct: 338 VDRVDDGLRIFEEMRSSGI 356
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/390 (21%), Positives = 168/390 (43%), Gaps = 32/390 (8%)
Query: 259 KLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAF 318
+L RK+ + N +N+++ + + G V++A+ +L+EM+ PD+ ++N LL+ +
Sbjct: 141 ELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGY 200
Query: 319 CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNK-------------LKGQQLYDK 365
KG +KPS + +SL+ L+ Q YD
Sbjct: 201 ASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDV 260
Query: 366 SLEV-------------YNSMLQNAIRPNTIIC-NHILRVHCREGQFREALTLLEDFHEQ 411
+E Y M+ + + I+ N ++ ++A L+ ++
Sbjct: 261 YVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKE 320
Query: 412 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEM 471
GI + ++N + P+ AL+++ +M ++ V P VV+++ + SG +K NF
Sbjct: 321 GIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSK-NGNFRN 379
Query: 472 VERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIA 531
++F ++ + G+ N T +TL+ I G H G ++ L D TAL+
Sbjct: 380 ALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVD 439
Query: 532 VFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFP 591
++ ++ A +F + +L ++ C++ G+ + F M G+ P
Sbjct: 440 MYGKSGDLQSAIEIFWGIKN----KSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEP 495
Query: 592 DVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 621
D +T+T +++ G + E K F M++
Sbjct: 496 DAITFTSVLSVCKNSGLVQEGWKYFDLMRS 525
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 147/356 (41%), Gaps = 19/356 (5%)
Query: 277 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 336
N++I + + G + + +V MK ++ S+N +L+++ K G V
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDR----NLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 337 CQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREG 396
C +KP IV + SL+ + + L ++ V M ++P+T + +L+ G
Sbjct: 184 CGLKPDIVTWNSLL----SGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPG 239
Query: 397 QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYS 456
+ + + + Y +I M K Y A + M +N +V ++
Sbjct: 240 HLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKN----IVAWN 295
Query: 457 TLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQ 516
+L+SG + + E L R+ K GI + T+ +L S + K KA G+M +
Sbjct: 296 SLVSGLSY-ACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKE 354
Query: 517 SCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDL 576
+ P+ VS+TA+ + A +F +M G PN T + L+ + +
Sbjct: 355 KGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHS 414
Query: 577 ATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK------ANCILL 626
++ RK + D T L+ Y K G + ++F +K NC+L+
Sbjct: 415 GKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLM 470
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 135/303 (44%), Gaps = 40/303 (13%)
Query: 349 LILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 408
L+ +C NK + + + +++ +L+ + N +CN ++ ++ R G+ + +
Sbjct: 95 LLQVCSNK----EGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSM 150
Query: 409 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN 468
++ N S+N I+ K Y A+ L+ M + P +V +++L+SG+A + +
Sbjct: 151 KDR----NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLS 206
Query: 469 FEMVERLFTRLVKAGITFNTKTYTTLI-------------SIHGRTRKRH---------- 505
+ + + R+ AG+ +T + ++L+ +IHG +
Sbjct: 207 KDAIA-VLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETT 265
Query: 506 --KAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVAC------ALFQEMSRIGCLPN 557
Y + G + + + D + ++A + ++ AC AL M + G P+
Sbjct: 266 LIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPD 325
Query: 558 LYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFG 617
T+ L G+ + + A + +MK KG+ P+VV++T + + K+G K+F
Sbjct: 326 AITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFI 385
Query: 618 EMK 620
+M+
Sbjct: 386 KMQ 388
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 181/411 (44%), Gaps = 29/411 (7%)
Query: 77 WVETH-GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHH 135
W E GF+ S + F ++++ A ++L+ D V + D+ S L+
Sbjct: 124 WAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRV---RSDEG----SNLV----- 171
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNV----GLELHIRSCNFLLKCLXXXXXXXXX 191
S F VLI+ +A M++ A + F A++ +R LL L
Sbjct: 172 SADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREA 231
Query: 192 XXXXXXL---METGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTY 244
+ M++ +P++ + I+++ ++ A ++ ++ PTVVTYGT
Sbjct: 232 SMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTL 291
Query: 245 IRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRT 304
I G C V +A +++ ++ +N FN +I G + G ++EAL ++E +
Sbjct: 292 IEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCES 351
Query: 305 FPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYD 364
P + +YN L+ FCK GD+ + P+ Y K ++
Sbjct: 352 GPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEE--- 408
Query: 365 KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEII 424
+ +Y +++ P+ + + IL++ C +G+ A+ + ++ +GI+ + + +I
Sbjct: 409 -GMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLI 467
Query: 425 HMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 475
H++C+ + A E ++R ++P + + + +G + + +M +RL
Sbjct: 468 HLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGL-RSKGMSDMAKRL 517
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/366 (19%), Positives = 163/366 (44%), Gaps = 9/366 (2%)
Query: 241 YGTYIRGLCECGYVDVAHKLV---RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 297
+ + + LC+ ++A LV + + +++ F +I + + G V +A+ E
Sbjct: 138 FDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFE 197
Query: 298 EMKSS----RTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLC 353
+S ++ ++ +LL+A CK+G V + + +L
Sbjct: 198 FARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILL 257
Query: 354 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 413
+ ++L ++ +++ M ++P + ++ +CR + + A+ +LE+ +
Sbjct: 258 NGWFRSRKL-KQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEM 316
Query: 414 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 473
+N +N II + + AL +M R P +V Y++L+ F K +
Sbjct: 317 EINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK-AGDLPGAS 375
Query: 474 RLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVF 533
++ ++ G+ T TY + K + + ++I++ PD ++Y ++ +
Sbjct: 376 KILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKML 435
Query: 534 CNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 593
C ++++A + +EM G P+L T T LI C+++ ++ A + FD R+GI P
Sbjct: 436 CEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAVRRGIIPQY 495
Query: 594 VTYTVL 599
+T+ ++
Sbjct: 496 ITFKMI 501
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 161/397 (40%), Gaps = 45/397 (11%)
Query: 240 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 299
T+ T I + G ++ A L ++ P+++ FN +IH G ++EA +L++M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 300 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 359
+ PD +YN+LL+ GD+
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDI----------------------------------- 391
Query: 360 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 419
+ +LE Y + + + P+T+ +L + C+ E ++ + I ++++S
Sbjct: 392 ----EAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHS 447
Query: 420 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRL 479
I+ M E A L R VL + +I +A++ E + +
Sbjct: 448 VPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTT-LAAVIDVYAEKGLWVEAETVFYGKR 506
Query: 480 VKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREM 539
+G + Y +I +G+ + KA F M PDE +Y +L + + +
Sbjct: 507 NMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLV 566
Query: 540 NVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 599
+ A + EM GC P TY +I + ++ + A L++ M++ G+ P+ V Y L
Sbjct: 567 DEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSL 626
Query: 600 IAWYHKHGRIGEKNKLFGEM-----KANCILLDDGIK 631
I + + G + E + F M ++N I+L IK
Sbjct: 627 INGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIK 663
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/506 (20%), Positives = 208/506 (41%), Gaps = 25/506 (4%)
Query: 139 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 198
FN LI ++ L A +F G+ + + N ++ +
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 199 METGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 254
E G P+ TY I++S GDI A E KI + G P VT+ + LC+ V
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 255 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMK-----SSRTFPDVY 309
++ ++ ++ H ++ + G V +A + E + SS T V
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAV- 485
Query: 310 SYNMLLNAFCKKG-DVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQ-QLYDKSL 367
++ + +KG V + ++ Y +I K G+ +L++K+L
Sbjct: 486 -----IDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMI-----KAYGKAKLHEKAL 535
Query: 368 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
++ M P+ N + ++ EA +L + + G +Y +I
Sbjct: 536 SLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASY 595
Query: 428 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFN 487
+ A++L M K V P V Y +LI+GFA E E + F + + G+ N
Sbjct: 596 VRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFA-ESGMVEEAIQYFRMMEEHGVQSN 654
Query: 488 TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQ 547
T+LI + + +A + +M S PD + +++++ ++ ++ A ++F
Sbjct: 655 HIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFN 714
Query: 548 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 607
+ G ++ ++ ++ + + +D A ++ +EM+ G+ D ++ ++A Y G
Sbjct: 715 ALREKGTC-DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADG 773
Query: 608 RIGEKNKLFGEMKAN-CILLDDGIKK 632
++ E +LF EM +LLD G K
Sbjct: 774 QLSECCELFHEMLVERKLLLDWGTFK 799
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 97/460 (21%), Positives = 183/460 (39%), Gaps = 21/460 (4%)
Query: 134 HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXX 193
+ VL +NV+IK + + E A +F KN G + N L + L
Sbjct: 512 RNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQR 571
Query: 194 XXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLC 249
++++G P TY M++ G + A ++ + ++G P V YG+ I G
Sbjct: 572 ILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFA 631
Query: 250 ECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 309
E G V+ A + R + N ++I + + G + EA V ++MK S PDV
Sbjct: 632 ESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVA 691
Query: 310 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEV 369
+ N +L + C + + ++++ +++ L KG + D+++EV
Sbjct: 692 ASNSML-SLCADLGIVSEAESIFNALREKGTCDVISFATMMYL----YKGMGMLDEAIEV 746
Query: 370 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLL-EDFHEQGINLNQYSYNEIIHMIC 428
M ++ + + N ++ + +GQ E L E E+ + L+ ++ + ++
Sbjct: 747 AEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLK 806
Query: 429 KESYPKMA---LELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFT-RLVKAGI 484
K P A L+ K P + +TL S E + L + + +
Sbjct: 807 KGGVPSEAVSQLQTAYNEAKPLATPAIT--ATLFSAMGLYAYALESCQELTSGEIPREHF 864
Query: 485 TFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACA 544
+N YT S G KAY R M + L PD V+ L+ ++ +
Sbjct: 865 AYNAVIYT--YSASGDIDMALKAYMR---MQEKGLEPDIVTQAYLVGIYGKAGMVEGVKR 919
Query: 545 LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM 584
+ ++ P+ + + D + + DLA + EM
Sbjct: 920 VHSRLTFGELEPSQSLFKAVRDAYVSANRQDLADVVKKEM 959
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 130/345 (37%), Gaps = 63/345 (18%)
Query: 347 TSLILLCKNK--------LKGQQLYDKSLEVYNSMLQ-NAIRPNTIICNHILRVHCREGQ 397
T+L LC N LK Q +++ L V+ + PN I N +LR R G+
Sbjct: 101 TTLASLCLNLSPKEQTVLLKEQTRWERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGK 160
Query: 398 FREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYST 457
+ E + G+ +Y ++ + K K AL + M +R P V +T
Sbjct: 161 WDELRLCWIEMAHNGVLPTNNTYGMLVDVYGKAGLVKEALLWIKHMGQRMHFPDEVTMAT 220
Query: 458 LISGF----------------------------------AKEQSNFEMVERLFTRLVKAG 483
++ F QS + + L L K G
Sbjct: 221 VVRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVG 280
Query: 484 ITFN--------------------TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDE 523
T T+ TLI ++G+ + + A F EM++S + D
Sbjct: 281 ARNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDT 340
Query: 524 VSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE 583
V++ +I ++ A +L ++M G P+ TY L+ I+ A + + +
Sbjct: 341 VTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRK 400
Query: 584 MKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 628
+++ G+FPD VT+ ++ + + E + EM N I +D+
Sbjct: 401 IRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDE 445
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 141/338 (41%), Gaps = 6/338 (1%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKS-SRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 334
F + I +C+ ++ AL + MK P+V YN ++N + K GD+
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 335 XXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 394
+ KP + + LI N +D +L+++ M + PN + N ++R
Sbjct: 220 GKERAKPDVCTFNILI----NGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLS 275
Query: 395 EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 454
G+ E + + + E G ++ + ++ +C+E A L+ +L + VLP +
Sbjct: 276 SGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFD 335
Query: 455 YSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEM 514
Y +L+ E +E + L K G T TTL+ ++ + KA +M
Sbjct: 336 YGSLVEKLCGENKAVRAME-MMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKM 394
Query: 515 IQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 574
+ + + PD V++ L+ C+ A L S G P+ TY L+ GF K
Sbjct: 395 MNAGILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRR 454
Query: 575 DLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 612
L +EM K + PD+ TY L+ G+ K
Sbjct: 455 KEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTGKFSRK 492
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 120/296 (40%), Gaps = 9/296 (3%)
Query: 205 PNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 260
PN+ Y +++ GD+ A ++ + P V T+ I G C D+A L
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 261 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 320
R++ K N FN +I GF G + E +++ EM + +L++ C+
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 321 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 380
+G V ++ PS +Y SL+ KL G+ +++E+ + + P
Sbjct: 311 EGRVDDACGLVLDLLNKRVLPSEFDYGSLV----EKLCGENKAVRAMEMMEELWKKGQTP 366
Query: 381 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
I C ++ + G+ +A +E GI + ++N ++ +C + A L
Sbjct: 367 CFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLR 426
Query: 441 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLIS 496
+ P Y L+SGF KE E E L ++ + + TY L+
Sbjct: 427 LLASSKGYEPDETTYHVLVSGFTKEGRRKEG-EVLVNEMLDKDMLPDIFTYNRLMD 481
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 70/148 (47%), Gaps = 19/148 (12%)
Query: 502 RKRHKAYCRFGEMIQSCLC-----------PDEVSYTALIAVFCNIREMNVACALFQEMS 550
R AYCR +M + L P+ Y ++ + +M+ A +Q M
Sbjct: 161 RSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMG 220
Query: 551 RIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIG 610
+ P++ T+ LI+G+C+ DLA LF EMK KG P+VV++ LI + G+I
Sbjct: 221 KERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIE 280
Query: 611 EKNKLFGEM--------KANCILLDDGI 630
E K+ EM +A C +L DG+
Sbjct: 281 EGVKMAYEMIELGCRFSEATCEILVDGL 308
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 93/210 (44%), Gaps = 17/210 (8%)
Query: 429 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNT 488
K Y +A + M R++ P V Y+T+++G+ K + + R + R+ K +
Sbjct: 172 KMDYALLAFDTMKRLIDGK--PNVGVYNTVVNGYVK-SGDMDKALRFYQRMGKERAKPDV 228
Query: 489 KTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQE 548
T+ LI+ + R+ K A F EM + P+ VS+ LI F + ++ + E
Sbjct: 229 CTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYE 288
Query: 549 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 608
M +GC + T L+DG C+ +D A L ++ K + P Y L+
Sbjct: 289 MIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLV-------- 340
Query: 609 IGEKNKLFGEMKA--NCILLDDGIKKLQDP 636
KL GE KA ++++ KK Q P
Sbjct: 341 ----EKLCGENKAVRAMEMMEELWKKGQTP 366
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 123/262 (46%), Gaps = 3/262 (1%)
Query: 364 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 423
DK+++++ +M ++ + N IL V C+ + +A L + +++ +YN I
Sbjct: 143 DKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSVDTVTYNVI 201
Query: 424 IHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAG 483
++ C ALE++ M++R + P + Y+T++ GF + F + K
Sbjct: 202 LNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFR-AGQIRHAWEFFLEMKKRD 260
Query: 484 ITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVAC 543
+ TYTT++ G + +A F EMI+ + P +Y A+I V C + A
Sbjct: 261 CEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAV 320
Query: 544 ALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWY 603
+F+EM R G PN+ TY LI G +L M+ +G P+ TY ++I +Y
Sbjct: 321 VMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYY 380
Query: 604 HKHGRIGEKNKLFGEM-KANCI 624
+ + + LF +M +C+
Sbjct: 381 SECSEVEKALGLFEKMGSGDCL 402
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 112/229 (48%), Gaps = 2/229 (0%)
Query: 392 HCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPG 451
+ G+ +A+ L + HE G + S+N I+ ++CK + A EL R L+
Sbjct: 136 YASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF-RALRGRFSVD 194
Query: 452 VVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRF 511
V Y+ +++G+ + + +E + +V+ GI N TY T++ R + A+ F
Sbjct: 195 TVTYNVILNGWCLIKRTPKALE-VLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFF 253
Query: 512 GEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKI 571
EM + D V+YT ++ F E+ A +F EM R G LP++ TY +I CK
Sbjct: 254 LEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKK 313
Query: 572 DYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
D ++ A +F+EM R+G P+V TY VLI G +L M+
Sbjct: 314 DNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRME 362
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/367 (22%), Positives = 147/367 (40%), Gaps = 58/367 (15%)
Query: 250 ECGYVDVAHKLVRKLHCKLHPL---------------NSHCFNAVIHGFCQRGAVNEALE 294
+ D+A + +LH LHP + F V + G ++A++
Sbjct: 90 DASSFDLAIDIAARLH--LHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVK 147
Query: 295 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 354
+ M F D+ S+N +L+ CK V
Sbjct: 148 LFLNMHEHGCFQDLASFNTILDVLCKSKRV------------------------------ 177
Query: 355 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 414
+K+ E++ + L+ +T+ N IL C + +AL +L++ E+GIN
Sbjct: 178 ---------EKAYELFRA-LRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGIN 227
Query: 415 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVER 474
N +YN ++ + + A E M KR+ VV Y+T++ GF +
Sbjct: 228 PNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGV-AGEIKRARN 286
Query: 475 LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFC 534
+F +++ G+ + TY +I + + A F EM++ P+ +Y LI
Sbjct: 287 VFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLF 346
Query: 535 NIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 594
+ E + L Q M GC PN TY +I + + ++ A LF++M P++
Sbjct: 347 HAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLD 406
Query: 595 TYTVLIA 601
TY +LI+
Sbjct: 407 TYNILIS 413
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 134/309 (43%), Gaps = 38/309 (12%)
Query: 199 METGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 254
+ GP P T+ I+ S G A ++ ++ G + ++ T + LC+ V
Sbjct: 120 LRIGPSPK--TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRV 177
Query: 255 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 314
+ A++L R L + +++ +N +++G+C +ALEVL+EM P++ +YN +
Sbjct: 178 EKAYELFRALRGRFS-VDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTM 236
Query: 315 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI---LLCKNKLKGQQLYDK------ 365
L F + G + + +V YT+++ + + + ++D+
Sbjct: 237 LKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGV 296
Query: 366 --SLEVYNSMLQ---------NAI-----------RPNTIICNHILRVHCREGQFREALT 403
S+ YN+M+Q NA+ PN N ++R G+F
Sbjct: 297 LPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEE 356
Query: 404 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 463
L++ +G N +YN +I + S + AL L +M + LP + Y+ LISG
Sbjct: 357 LMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMF 416
Query: 464 KEQSNFEMV 472
+ + +MV
Sbjct: 417 VRKRSEDMV 425
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 85/191 (44%), Gaps = 5/191 (2%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
++ +N ++K F + HA + F+ K E+ + + ++
Sbjct: 229 NLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVF 288
Query: 196 XXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
++ G LP++ TY M+ ++ A + ++ R G P V TY IRGL
Sbjct: 289 DEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHA 348
Query: 252 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 311
G +L++++ + N +N +I + + V +AL + E+M S P++ +Y
Sbjct: 349 GEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTY 408
Query: 312 NMLLNA-FCKK 321
N+L++ F +K
Sbjct: 409 NILISGMFVRK 419
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 67/149 (44%), Gaps = 1/149 (0%)
Query: 472 VERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIA 531
V L R+ I + KT+ + + K KA F M + D S+ ++
Sbjct: 110 VWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILD 169
Query: 532 VFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFP 591
V C + + A LF+ + R + TY +++G+C I A ++ EM +GI P
Sbjct: 170 VLCKSKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINP 228
Query: 592 DVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
++ TY ++ + + G+I + F EMK
Sbjct: 229 NLTTYNTMLKGFFRAGQIRHAWEFFLEMK 257
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 155/347 (44%), Gaps = 44/347 (12%)
Query: 275 CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 334
F+ VI ++ +EA + +K R PDV Y L+ +C+ G++
Sbjct: 223 AFSIVISNLSRKRRASEAQSFFDSLKD-RFEPDVIVYTNLVRGWCRAGEISEAEKVFKEM 281
Query: 335 XXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 393
I+P++ Y+ +I LC+ GQ ++ +V+ ML + PN I N+++RVH
Sbjct: 282 KLAGIEPNVYTYSIVIDALCRC---GQ--ISRAHDVFADMLDSGCAPNAITFNNLMRVHV 336
Query: 394 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 453
+ G+ + L + YN++ + C+ P +
Sbjct: 337 KAGRTEKVLQV---------------YNQMKKLGCE--------------------PDTI 361
Query: 454 NYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE 513
Y+ LI +++ N E ++ ++K N T+ T+ + R + A+ + +
Sbjct: 362 TYNFLIEAHCRDE-NLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSK 420
Query: 514 MIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 573
M+++ P+ V+Y L+ +F + ++ + +EM PN+ TY L+ FC + +
Sbjct: 421 MMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGH 480
Query: 574 IDLATQLFDEM-KRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
+ A +LF EM + K + P + Y +++A + G++ + +L +M
Sbjct: 481 WNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKM 527
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 148/331 (44%), Gaps = 11/331 (3%)
Query: 206 NIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
+I T+TI++ G A ++ G P + + I L A
Sbjct: 185 SIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFF 244
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
L + P + + ++ G+C+ G ++EA +V +EMK + P+VY+Y+++++A C+
Sbjct: 245 DSLKDRFEP-DVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRC 303
Query: 322 GDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 381
G + P+ + + +L+ + +K + +K L+VYN M + P+
Sbjct: 304 GQISRAHDVFADMLDSGCAPNAITFNNLMRV---HVKAGRT-EKVLQVYNQMKKLGCEPD 359
Query: 382 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMP 441
TI N ++ HCR+ A+ +L ++ +N ++N I I K+ A +
Sbjct: 360 TITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYS 419
Query: 442 RMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRT 501
+M++ P V Y+ L+ F +S +MV ++ + + N TY L+++
Sbjct: 420 KMMEAKCEPNTVTYNILMRMFVGSKST-DMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGM 478
Query: 502 RKRHKAYCRFGEMIQS-CLCPDEVSYTALIA 531
+ AY F EM++ CL P Y ++A
Sbjct: 479 GHWNNAYKLFKEMVEEKCLTPSLSLYEMVLA 509
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 2/203 (0%)
Query: 418 YSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFT 477
+ YNE+I + K +A L+ M RNV + ++ LI + + E V F
Sbjct: 152 HPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVH-CFN 210
Query: 478 RLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIR 537
R+ G + ++ +IS R R+ +A F + ++ PD + YT L+ +C
Sbjct: 211 RMEDYGCVPDKIAFSIVISNLSRKRRASEAQS-FFDSLKDRFEPDVIVYTNLVRGWCRAG 269
Query: 538 EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYT 597
E++ A +F+EM G PN+YTY+ +ID C+ I A +F +M G P+ +T+
Sbjct: 270 EISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFN 329
Query: 598 VLIAWYHKHGRIGEKNKLFGEMK 620
L+ + K GR + +++ +MK
Sbjct: 330 NLMRVHVKAGRTEKVLQVYNQMK 352
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 109/237 (45%), Gaps = 3/237 (1%)
Query: 388 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 447
++R + R G EA+ + G ++ +++ +I + ++ A LK
Sbjct: 192 LIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDS-LKDR 250
Query: 448 VLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKA 507
P V+ Y+ L+ G+ + E++F + AGI N TY+ +I R + +A
Sbjct: 251 FEPDVIVYTNLVRGWCR-AGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRA 309
Query: 508 YCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDG 567
+ F +M+ S P+ +++ L+ V ++ +M ++GC P+ TY LI+
Sbjct: 310 HDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEA 369
Query: 568 FCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE-MKANC 623
C+ + ++ A ++ + M +K + T+ + + K + ++++ + M+A C
Sbjct: 370 HCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKC 426
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 62/353 (17%), Positives = 144/353 (40%), Gaps = 30/353 (8%)
Query: 86 SVNYFRIIIHTFAMAGM---------HLEVFALLRDIVGYC----------KCDDSFEQF 126
S+ F I+I + AG+ +E + + D + + + ++ F
Sbjct: 185 SIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFF 244
Query: 127 STLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXX 186
+L D V+V+ L++ + + A +VF K G+E ++ + + ++ L
Sbjct: 245 DSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCG 304
Query: 187 XXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYG 242
++++G PN T+ +M G ++ ++ + G P +TY
Sbjct: 305 QISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYN 364
Query: 243 TYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSS 302
I C ++ A K++ + K +N+ FN + ++ VN A + +M +
Sbjct: 365 FLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEA 424
Query: 303 RTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQ 361
+ P+ +YN+L+ F +++P++ Y L+ + C G
Sbjct: 425 KCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFC-----GMG 479
Query: 362 LYDKSLEVYNSMLQNA-IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 413
++ + +++ M++ + P+ + +L R GQ ++ L+E ++G+
Sbjct: 480 HWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 113/602 (18%), Positives = 234/602 (38%), Gaps = 89/602 (14%)
Query: 73 KFGSWV-ETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLD 131
+F +WV + GFSH V + ++ + A +L++ L + CD
Sbjct: 174 RFFNWVKQKDGFSHRVGIYNTML-SIAGEARNLDMVDELVSEMEKNGCD----------- 221
Query: 132 LPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXX 191
+ + +LI V+ + VF + G EL + N +++ L
Sbjct: 222 ---KDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLA 278
Query: 192 XXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRG 247
+ME G + TY +++ C + + I + R +G ++
Sbjct: 279 LEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKS 338
Query: 248 LCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 307
C G + A +L+R+L K L++ F ++ G C+ + +ALE+++ MK R D
Sbjct: 339 FCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMK-RRKLDD 397
Query: 308 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSL 367
Y ++++ + ++ DV P + YT ++ ++ K +Q ++K
Sbjct: 398 SNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIM---QHLFKLKQ-FEKGC 453
Query: 368 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
++N M++N I P+++ ++ H + + EA + E+GI SY+ + +
Sbjct: 454 NLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKEL 513
Query: 428 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK--EQSNFEMVERLFTRLVKAGIT 485
C+ S +++ +M ++ +S +IS K E+ +++ + R
Sbjct: 514 CRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIHLIKEIQKR------- 566
Query: 486 FNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVA--C 543
+ +Y ++ G+ + + E++ CP V +AL + +M+V C
Sbjct: 567 --SNSYCDELNGSGKAE-----FSQEEELVDDYNCPQLVQQSALPPALSAVDKMDVQEIC 619
Query: 544 ALFQ------------EMSRIGCLPNL------------------YTYTCLIDGF----- 568
+ E S + P L +++ +G+
Sbjct: 620 RVLSSSRDWERTQEALEKSTVQFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSE 679
Query: 569 ----------CKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE 618
C D+ + + LF EM+R+G T+ ++I Y + G + F E
Sbjct: 680 AYNMSIKVAGCGKDFKQMRS-LFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKE 738
Query: 619 MK 620
MK
Sbjct: 739 MK 740
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 157/408 (38%), Gaps = 78/408 (19%)
Query: 73 KFGSWV-ETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLL- 130
+F SWV + +G+ H+ + + I +AG C F+Q +L
Sbjct: 663 RFFSWVGKRNGYKHNSEAYNMSIK---VAG-----------------CGKDFKQMRSLFY 702
Query: 131 DLPHHSVLV----FNVLIKVFASNSMLEHAHQVFVSAKNVGL--ELHIRSCNFLLKCLXX 184
++ L+ + ++I + + A + F K++GL C + C
Sbjct: 703 EMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKK 762
Query: 185 XXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC-------GDIRLAAEILGKIYRSGGNPT 237
++ +G +P+ + C D + + LGKI G P
Sbjct: 763 GRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKI----GFPV 818
Query: 238 VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 297
V Y YIR LC G ++ A + + L+ + + +++HG QRG + +AL+ +
Sbjct: 819 TVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVN 878
Query: 298 EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKL 357
MK T P V+ Y L+ F K+ + +PS+V YT++
Sbjct: 879 SMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAM-------- 930
Query: 358 KGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQ 417
IC ++ G+ EA + E+G + +
Sbjct: 931 --------------------------ICGYM-----SLGKVEEAWNAFRNMEERGTSPDF 959
Query: 418 YSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKE 465
+Y++ I+ +C+ + AL+L+ ML + + P +N+ T+ G +E
Sbjct: 960 KTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNRE 1007
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/409 (20%), Positives = 165/409 (40%), Gaps = 59/409 (14%)
Query: 231 RSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVN 290
+ G + V Y T + E +D+ +LV ++ + + +I + + +
Sbjct: 182 KDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIG 241
Query: 291 EALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI 350
+ L V E+M+ S D +YN+++ + C G I + Y ++
Sbjct: 242 KGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTY-KML 300
Query: 351 LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIIC--------NHILRVHCREGQFREAL 402
L C K + ++V S+ + +R IC ++L+ C G+ +EAL
Sbjct: 301 LDCIAK-------SEKVDVVQSIADDMVR----ICEISEHDAFGYLLKSFCVSGKIKEAL 349
Query: 403 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 462
L+ + + + L+ + ++ +C+ + ALE++ ++KR L Y +ISG+
Sbjct: 350 ELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVD-IMKRRKLDDSNVYGIIISGY 408
Query: 463 AKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPD 522
++ + +E+ E+I+ P
Sbjct: 409 LRQNDVSKALEQF-------------------------------------EVIKKSGRPP 431
Query: 523 EVS-YTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLF 581
VS YT ++ +++ C LF EM G P+ T ++ G + + A ++F
Sbjct: 432 RVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVF 491
Query: 582 DEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 630
M+ KGI P +Y++ + + R E K+F +M A+ I++ D I
Sbjct: 492 SSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDI 540
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 100/209 (47%), Gaps = 4/209 (1%)
Query: 422 EIIHMICKESY--PKMALELMPRMLKRNVLPGVVN-YSTLISGFAKEQSNFEMVERLFTR 478
EI+ + K + P +A+ + +++ V Y+T++S A E N +MV+ L +
Sbjct: 156 EIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLS-IAGEARNLDMVDELVSE 214
Query: 479 LVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIRE 538
+ K G + +T+T LIS++G+ +K K F +M +S D +Y +I C
Sbjct: 215 MEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGR 274
Query: 539 MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTV 598
++A ++EM G L TY L+D K + +D+ + D+M R + +
Sbjct: 275 GDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGY 334
Query: 599 LIAWYHKHGRIGEKNKLFGEMKANCILLD 627
L+ + G+I E +L E+K + LD
Sbjct: 335 LLKSFCVSGKIKEALELIRELKNKEMCLD 363
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 135/343 (39%), Gaps = 49/343 (14%)
Query: 271 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC-KKG-DVXXXX 328
+ + +I + + G N A+ +EMK P ++ L+ C KKG +V
Sbjct: 711 ITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEAT 770
Query: 329 XXXXXXXXCQIKPS---IVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIIC 385
P + +Y + N + D L P T+
Sbjct: 771 RTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDS--------LGKIGFPVTVAY 822
Query: 386 NHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLK 445
+ +R CR G+ EAL+ L F + L+QY+Y I+H + + + AL+ + M +
Sbjct: 823 SIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKE 882
Query: 446 RNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRH 505
PGV Y++LI F KE+ +++E T + G
Sbjct: 883 IGTKPGVHVYTSLIVYFFKEKQLEKVLE-------------------TCQKMEG------ 917
Query: 506 KAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLI 565
+SC P V+YTA+I + ++ ++ A F+ M G P+ TY+ I
Sbjct: 918 ----------ESCE-PSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFI 966
Query: 566 DGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 608
+ C+ + A +L EM KGI P + + + ++ G+
Sbjct: 967 NCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGK 1009
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 101/564 (17%), Positives = 206/564 (36%), Gaps = 61/564 (10%)
Query: 86 SVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIK 145
YF I++ A ++ ++ DI+ K DDS V+ ++I
Sbjct: 363 DAKYFEILVKGLCRANRMVDALEIV-DIMKRRKLDDSN---------------VYGIIIS 406
Query: 146 VFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLP 205
+ + + A + F K G + + +++ L ++E G P
Sbjct: 407 GYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEP 466
Query: 206 NIHTYTIMMS--CGDIRLAA--EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
+ T +++ G R+A ++ + G PT +Y +++ LC D K+
Sbjct: 467 DSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIF 526
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
++H + F+ VI + G + + E K S ++ D + + F ++
Sbjct: 527 NQMHASKIVIRDDIFSWVISSMEKNGEKEKIHLIKEIQKRSNSYCDELNGSGKAE-FSQE 585
Query: 322 GDVXXXXXXXXXXXXCQIKP--SIVNYTSLILLCK------NKLKGQQLYDKS-LEVYNS 372
++ + P S V+ + +C+ + + Q+ +KS ++
Sbjct: 586 EELVDDYNCPQLVQQSALPPALSAVDKMDVQEICRVLSSSRDWERTQEALEKSTVQFTPE 645
Query: 373 MLQNAIRPNTIICNHILR----VHCREG-------------------QFREALTLLEDFH 409
++ +R I N +LR V R G F++ +L +
Sbjct: 646 LVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMR 705
Query: 410 EQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF-AKEQSN 468
QG + Q ++ +I + +A+ M ++P + LI+ K+ N
Sbjct: 706 RQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRN 765
Query: 469 FEMVERLFTRLVKAGITFN---TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVS 525
E R F ++++G + + Y + G T+ G++ P V+
Sbjct: 766 VEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKI----GFPVTVA 821
Query: 526 YTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 585
Y+ I C I ++ A + L + YTY ++ G + + A + MK
Sbjct: 822 YSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMK 881
Query: 586 RKGIFPDVVTYTVLIAWYHKHGRI 609
G P V YT LI ++ K ++
Sbjct: 882 EIGTKPGVHVYTSLIVYFFKEKQL 905
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 121/307 (39%), Gaps = 55/307 (17%)
Query: 341 PSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFR 399
PS + LI +LC+ K + +++ + M+++ P+ + L C G +
Sbjct: 746 PSSSTFKCLITVLCEKKGRN---VEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTK 802
Query: 400 EALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLI 459
+A + L+ + G + +Y+ I +C+ + AL + +
Sbjct: 803 DAKSCLDSLGKIGFPVT-VAYSIYIRALCRIGKLEEAL-------------------SEL 842
Query: 460 SGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKR--HKAYCRFGEMIQS 517
+ F E+S + TY +++ HG ++ KA + M +
Sbjct: 843 ASFEGERS-----------------LLDQYTYGSIV--HGLLQRGDLQKALDKVNSMKEI 883
Query: 518 CLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLA 577
P YT+LI F +++ Q+M C P++ TYT +I G+ + ++ A
Sbjct: 884 GTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEA 943
Query: 578 TQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKLQDPK 637
F M+ +G PD TY+ I + + + KL EM LD GI P
Sbjct: 944 WNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEM------LDKGIA----PS 993
Query: 638 LVQFKNV 644
+ F+ V
Sbjct: 994 TINFRTV 1000
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 129/283 (45%), Gaps = 7/283 (2%)
Query: 339 IKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 398
I S+V S++L C LK ++L D+ E++ M+++ I C ++R C G
Sbjct: 176 ISSSVVTCNSVLLGC---LKARKL-DRFWELHKEMVESEFDSERIRC--LIRALCDGGDV 229
Query: 399 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 458
E LL+ +QG++ QY Y ++I C+ E++ M+ N P + Y +
Sbjct: 230 SEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKI 289
Query: 459 ISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSC 518
I G + E +F L G + YTT+I A + EMI+
Sbjct: 290 IKGLCMNKKQLEAY-CIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKG 348
Query: 519 LCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLAT 578
+ P+E +Y +I E+++ A + EM R G + + +I GFC D A
Sbjct: 349 MRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKSDEAF 408
Query: 579 QLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 621
++F M G+ P+ +TY LI + K ++ + KL+ E+KA
Sbjct: 409 EIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKA 451
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 9/266 (3%)
Query: 357 LKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLN 416
L + L ++++EVYN + I + + CN +L + C + + L + H++ + +
Sbjct: 155 LSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVL-LGCLKAR---KLDRFWELHKEMVE-S 209
Query: 417 QYSYNEI---IHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 473
++ I I +C EL+ + LK+ + PG Y+ LISGF E N+ +
Sbjct: 210 EFDSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFC-EIGNYACMS 268
Query: 474 RLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVF 533
+ ++ + Y +I +K+ +AYC F + PD V YT +I F
Sbjct: 269 EVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGF 328
Query: 534 CNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 593
C + A L+ EM + G PN + Y +I G K I L ++EM R G +
Sbjct: 329 CEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTM 388
Query: 594 VTYTVLIAWYHKHGRIGEKNKLFGEM 619
++ +I + HG+ E ++F M
Sbjct: 389 LSCNTMIKGFCSHGKSDEAFEIFKNM 414
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 131/318 (41%), Gaps = 6/318 (1%)
Query: 144 IKVFASNSMLEHAHQVFVSAKNVGLELHIRSCN-FLLKCLXXXXXXXXXXXXXXXLMETG 202
+K + ++E A +V+ K++G+ + +CN LL CL +
Sbjct: 152 VKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF 211
Query: 203 PLPNIHTYT-IMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
I + GD+ E+L + + G +P Y I G CE G +++
Sbjct: 212 DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVL 271
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
+ H + + + +I G C EA + + +K PD Y ++ FC+K
Sbjct: 272 HTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEK 331
Query: 322 GDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 381
G + ++P+ Y +++ + +G+ ++ YN ML+N
Sbjct: 332 GWLGSARKLWFEMIKKGMRPNEFAYN--VMIHGHFKRGEISLVEAF--YNEMLRNGYGGT 387
Query: 382 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMP 441
+ CN +++ C G+ EA + ++ E G+ N +YN +I CKE+ + L+L
Sbjct: 388 MLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYK 447
Query: 442 RMLKRNVLPGVVNYSTLI 459
+ + P + Y+ L+
Sbjct: 448 ELKALGLKPSGMAYAALV 465
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 114/253 (45%), Gaps = 6/253 (2%)
Query: 340 KPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFR 399
KP Y LI C +D +L++++ M++ ++P + ++ C++ + +
Sbjct: 149 KPDACTYNILIHGCSQ----SGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVK 204
Query: 400 EALTLLEDFHE-QGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 458
EAL + D + G+ + Y +I +C+ A +L + + YSTL
Sbjct: 205 EALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTL 264
Query: 459 ISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSC 518
IS K + E V + + + G +T TY LI+ A EM++
Sbjct: 265 ISSLIKAGRSNE-VSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKG 323
Query: 519 LCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLAT 578
L PD +SY ++ VF I++ A LF++M R GC P+ +Y + DG C+ + A
Sbjct: 324 LKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAA 383
Query: 579 QLFDEMKRKGIFP 591
+ DEM KG P
Sbjct: 384 VILDEMLFKGYKP 396
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 24/233 (10%)
Query: 397 QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYS 456
+ +E L+ +++F + + +YN +IH + AL+L M+K+ V P V +
Sbjct: 136 KMKERLSSIDEFGKP----DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFG 191
Query: 457 TLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQ 516
TLI G K+ E ++ L G+ Y +LI KA C+ GE+
Sbjct: 192 TLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLI----------KALCQIGELSF 241
Query: 517 SCLCPDEVS----------YTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLID 566
+ DE Y+ LI+ N + +EMS GC P+ TY LI+
Sbjct: 242 AFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLIN 301
Query: 567 GFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
GFC + + A ++ DEM KG+ PDV++Y +++ + + + E LF +M
Sbjct: 302 GFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDM 354
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 106/222 (47%), Gaps = 2/222 (0%)
Query: 379 RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 438
+P+ N ++ + G F +AL L ++ ++ + ++ +IH +CK+S K AL+
Sbjct: 149 KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALK 208
Query: 439 LMPRMLK-RNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISI 497
+ MLK V P V Y++LI + +L + I + Y+TLIS
Sbjct: 209 MKHDMLKVYGVRPTVHIYASLIKALC-QIGELSFAFKLKDEAYEGKIKVDAAIYSTLISS 267
Query: 498 HGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPN 557
+ + ++ EM + PD V+Y LI FC + A + EM G P+
Sbjct: 268 LIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPD 327
Query: 558 LYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 599
+ +Y ++ F +I + AT LF++M R+G PD ++Y ++
Sbjct: 328 VISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIV 369
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 136/336 (40%), Gaps = 40/336 (11%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
+N +IHG Q G ++AL++ +EM + P ++ L++ CK V
Sbjct: 155 YNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRV----------- 203
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
K LK + L+VY +RP I +++ C+
Sbjct: 204 ------------------KEALKMKH---DMLKVY------GVRPTVHIYASLIKALCQI 236
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
G+ A L ++ +E I ++ Y+ +I + K ++ M ++ P V Y
Sbjct: 237 GELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTY 296
Query: 456 STLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMI 515
+ LI+GF E + E R+ +V+ G+ + +Y ++ + R +K +A F +M
Sbjct: 297 NVLINGFCVENDS-ESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMP 355
Query: 516 QSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 575
+ PD +SY + C + A + EM G P + C+ ++
Sbjct: 356 RRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLE 415
Query: 576 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
+ +++ + R GI D ++V+I K I +
Sbjct: 416 ILSKVISSLHR-GIAGDADVWSVMIPTMCKEPVISD 450
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 6/248 (2%)
Query: 216 CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHC 275
CG++ E L I G P TY I G + G D A KL ++ K
Sbjct: 131 CGELEKMKERLSSI-DEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVT 189
Query: 276 FNAVIHGFCQRGAVNEALEVLEEM-KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 334
F +IHG C+ V EAL++ +M K P V+ Y L+ A C+ G++
Sbjct: 190 FGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEA 249
Query: 335 XXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 394
+IK Y++LI + +K + + S+ + M + +P+T+ N ++ C
Sbjct: 250 YEGKIKVDAAIYSTLI---SSLIKAGRSNEVSM-ILEEMSEKGCKPDTVTYNVLINGFCV 305
Query: 395 EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 454
E A +L++ E+G+ + SYN I+ + + + A L M +R P ++
Sbjct: 306 ENDSESANRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLS 365
Query: 455 YSTLISGF 462
Y + G
Sbjct: 366 YRIVFDGL 373
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 115/259 (44%), Gaps = 13/259 (5%)
Query: 228 KIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRG 287
K+Y G PTV Y + I+ LC+ G + A KL + + +++ ++ +I + G
Sbjct: 215 KVY--GVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAG 272
Query: 288 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYT 347
NE +LEEM PD +YN+L+N FC + D +KP +++Y
Sbjct: 273 RSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISY- 331
Query: 348 SLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 407
++IL ++K ++++ ++ M + P+T+ + C QF EA +L++
Sbjct: 332 NMILGVFFRIKK---WEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDE 388
Query: 408 FHEQGINLNQYSYNEIIHMICKESYPKMALELMPRM---LKRNVLPGVVNYSTLISGFAK 464
+G + + +C+ LE++ ++ L R + +S +I K
Sbjct: 389 MLFKGYKPRRDRLEGFLQKLCESG----KLEILSKVISSLHRGIAGDADVWSVMIPTMCK 444
Query: 465 EQSNFEMVERLFTRLVKAG 483
E + ++ L + + G
Sbjct: 445 EPVISDSIDLLLNTVKEDG 463
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 104/252 (41%), Gaps = 13/252 (5%)
Query: 202 GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 257
G P +H Y ++ G++ A ++ + Y Y T I L + G +
Sbjct: 218 GVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEV 277
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
++ ++ K ++ +N +I+GFC A VL+EM PDV SYNM+L
Sbjct: 278 SMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGV 337
Query: 318 F--CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQ 375
F KK + C P ++Y ++ +G Q ++++ + + ML
Sbjct: 338 FFRIKKWEEATYLFEDMPRRGCS--PDTLSYR---IVFDGLCEGLQ-FEEAAVILDEMLF 391
Query: 376 NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 435
+P L+ C G+ ++ H +GI + ++ +I +CKE
Sbjct: 392 KGYKPRRDRLEGFLQKLCESGKLEILSKVISSLH-RGIAGDADVWSVMIPTMCKEPVISD 450
Query: 436 ALELMPRMLKRN 447
+++L+ +K +
Sbjct: 451 SIDLLLNTVKED 462
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 188/461 (40%), Gaps = 62/461 (13%)
Query: 139 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 198
+F VL++ FAS M++ A +V G E ++ CL L
Sbjct: 185 LFVVLVQRFASADMVKKAIEVLDEMPKFGFEPD----EYVFGCLLDALCKHGSVKDAAKL 240
Query: 199 METGPLP---NIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
E + N+ +T ++ G + A +L ++ +G P +V Y + G
Sbjct: 241 FEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANA 300
Query: 252 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 311
G + A+ L+R + + N++C+ +I C+ + EA++V EM+ DV +Y
Sbjct: 301 GKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTY 360
Query: 312 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYN 371
L++ FCK G + + PS + Y +++ + K + +++ LE+
Sbjct: 361 TALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKK----ESFEECLELME 416
Query: 372 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 431
M Q P+ I N ++R+ C+ G+ +EA+ L + E G++
Sbjct: 417 KMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLS----------------- 459
Query: 432 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
PGV + +I+G A + E + F +V G+ F+ Y
Sbjct: 460 ------------------PGVDTFVIMINGLASQGCLLEASDH-FKEMVTRGL-FSVSQY 499
Query: 492 TTLISIHGRTRKRHKAYCRFGEMIQSCLCP------DEVSYTALI-AVFCNIREMNVACA 544
TL + K K + + SC+ + +S+T I A+F E AC+
Sbjct: 500 GTLKLLLNTVLKDKK--LEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKE-ACS 556
Query: 545 LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 585
EM + +P T+ L+ G K+ + A ++ ++++
Sbjct: 557 YCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGEITEKVR 597
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 137/321 (42%), Gaps = 8/321 (2%)
Query: 271 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 330
+ F ++ F V +A+EVL+EM PD Y + LL+A CK G V
Sbjct: 181 IEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKL 240
Query: 331 XXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHIL 389
+ ++ +TSL+ C+ G+ + K + V M + P+ + ++L
Sbjct: 241 FEDMRM-RFPVNLRYFTSLLYGWCRV---GKMMEAKYVLV--QMNEAGFEPDIVDYTNLL 294
Query: 390 RVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL 449
+ G+ +A LL D +G N Y +I +CK + A+++ M +
Sbjct: 295 SGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECE 354
Query: 450 PGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYC 509
VV Y+ L+SGF K + + ++K G+ + TY ++ H + +
Sbjct: 355 ADVVTYTALVSGFCK-WGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLE 413
Query: 510 RFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 569
+M Q PD Y +I + C + E+ A L+ EM G P + T+ +I+G
Sbjct: 414 LMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLA 473
Query: 570 KIDYIDLATQLFDEMKRKGIF 590
+ A+ F EM +G+F
Sbjct: 474 SQGCLLEASDHFKEMVTRGLF 494
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 131/282 (46%), Gaps = 3/282 (1%)
Query: 341 PSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFRE 400
P ++ ++L + + + K++EV + M + P+ + +L C+ G ++
Sbjct: 178 PQLIEPELFVVLVQ-RFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKD 236
Query: 401 ALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 460
A L ED + +N + +++ C+ A ++ +M + P +V+Y+ L+S
Sbjct: 237 AAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLS 295
Query: 461 GFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLC 520
G+A + + L + + G N YT LI + + +A F EM +
Sbjct: 296 GYANAGKMADAYD-LLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECE 354
Query: 521 PDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQL 580
D V+YTAL++ FC +++ + +M + G +P+ TY ++ K + + +L
Sbjct: 355 ADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLEL 414
Query: 581 FDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
++M++ PD+ Y V+I K G + E +L+ EM+ N
Sbjct: 415 MEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEEN 456
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 108/253 (42%), Gaps = 4/253 (1%)
Query: 361 QLYDKSLEVYNSMLQNAIRPNTIICNHILRVH-CREGQFREALTLLEDFHEQGINLNQYS 419
+L +K L + ML+ P N IL V G ++A L + G+ N S
Sbjct: 133 KLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRS 192
Query: 420 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF-AKEQSNFEMVERLFTR 478
YN ++ C +A +L +ML+R+V+P V +Y LI GF K Q N M L
Sbjct: 193 YNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAM--ELLDD 250
Query: 479 LVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIRE 538
++ G + +YTTL++ R + +AY M PD V Y +I FC
Sbjct: 251 MLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDR 310
Query: 539 MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTV 598
A + +M GC PN +Y LI G C D + +EM KG P
Sbjct: 311 AMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNC 370
Query: 599 LIAWYHKHGRIGE 611
L+ + G++ E
Sbjct: 371 LVKGFCSFGKVEE 383
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%)
Query: 404 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 463
+L G L + +I + + P+ L +ML+ N P + + ++
Sbjct: 106 VLAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLV 165
Query: 464 KEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDE 523
+ + LF G+ NT++Y L+ AY FG+M++ + PD
Sbjct: 166 SHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDV 225
Query: 524 VSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE 583
SY LI FC ++N A L +M G +P+ +YT L++ C+ + A +L
Sbjct: 226 DSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCR 285
Query: 584 MKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
MK KG PD+V Y +I + + R + K+ +M +N
Sbjct: 286 MKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSN 324
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 158/418 (37%), Gaps = 85/418 (20%)
Query: 221 LAAEILGKIYRSGGNPTVVTYGTY-IRGLCECGYVD-VAHKLVRKLHCKLHPLNSHCFNA 278
L ++L K +RS G P TY I+ E + V + L P H
Sbjct: 102 LIDDVLAK-HRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRI 160
Query: 279 VIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ 338
+ RG + +A E+ + + P+ SYN+L+ AFC D+
Sbjct: 161 LDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSI------------ 208
Query: 339 IKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 398
+ +++ ML+ + P+ +++ CR+GQ
Sbjct: 209 ---------------------------AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 399 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 458
A+ LL+D +G ++ SY +++ +C+++ + A +L+ RM + P +V+Y+T+
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTM 301
Query: 459 ISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSC 518
I GF +E + + L +M+ +
Sbjct: 302 ILGFCREDRAMDARKVL------------------------------------DDMLSNG 325
Query: 519 LCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLAT 578
P+ VSY LI C+ + +EM G P+ CL+ GFC ++ A
Sbjct: 326 CSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEAC 385
Query: 579 QLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF------GEMKANCILLDDGI 630
+ + + + G T+ ++I EK KLF E+ + ++D GI
Sbjct: 386 DVVEVVMKNGETLHSDTWEMVIPLICNEDE-SEKIKLFLEDAVKEEITGDTRIVDVGI 442
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 8/242 (3%)
Query: 89 YFRIIIHTFAMAGMHL-EVFALLRDIVGYCKCDDSFEQF-STLLDLPHHSVLVFNVLIKV 146
+++++ F HL + +L GY + +FE F S+ L + +N+L++
Sbjct: 142 FYKMLEFNFTPQPKHLNRILDVLVSHRGYLQ--KAFELFKSSRLHGVMPNTRSYNLLMQA 199
Query: 147 FASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPN 206
F N L A+Q+F + + S L++ ++ G +P+
Sbjct: 200 FCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD 259
Query: 207 IHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVR 262
+YT +++ +R A ++L ++ G NP +V Y T I G C A K++
Sbjct: 260 RLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLD 319
Query: 263 KLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKG 322
+ NS + +I G C +G +E + LEEM S P N L+ FC G
Sbjct: 320 DMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFG 379
Query: 323 DV 324
V
Sbjct: 380 KV 381
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 162/373 (43%), Gaps = 23/373 (6%)
Query: 272 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 331
+S +N+++ + + VLEEM ++ + ++ + + AF +
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLTMETFTIAMKAFAAAKERKKAVGIF 252
Query: 332 XXXXXCQIKPSIVNYTSLI-LLCKNKL--KGQQLYDKSLEVYNSMLQNAIRPNTIICNHI 388
+ K + L+ L + KL + Q L+DK L+ PN + +
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK--------LKERFTPNMMTYTVL 304
Query: 389 LRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV 448
L CR EA + D +QG+ + ++N ++ + + A++L M +
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGP 364
Query: 449 LPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAY 508
P V +Y+ +I F K QS+ E F +V +G+ + YT LI+ G +K Y
Sbjct: 365 CPNVRSYTIMIRDFCK-QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 423
Query: 509 CRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGF 568
EM + PD +Y ALI + N + A ++ +M + P+++T+ ++ +
Sbjct: 424 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSY 483
Query: 569 CKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 628
++ +++EM +KGI PD +YTVLI G IGE G+ + C L++
Sbjct: 484 FMARNYEMGRAVWEEMIKKGICPDDNSYTVLI-----RGLIGE-----GKSREACRYLEE 533
Query: 629 GIKKLQDPKLVQF 641
+ K L+ +
Sbjct: 534 MLDKGMKTPLIDY 546
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 152/361 (42%), Gaps = 12/361 (3%)
Query: 271 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 330
L F + F +A+ + E MK + V + N LL++ + +
Sbjct: 227 LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGR-AKLGKEAQV 285
Query: 331 XXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 390
+ P+++ YT +L + + L + + ++N M+ ++P+ + N +L
Sbjct: 286 LFDKLKERFTPNMMTYT---VLLNGWCRVRNLIEAA-RIWNDMIDQGLKPDIVAHNVMLE 341
Query: 391 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 450
R + +A+ L +G N SY +I CK+S + A+E M+ + P
Sbjct: 342 GLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQP 401
Query: 451 GVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCR 510
Y+ LI+GF Q + V L + + G + KTY LI + + A
Sbjct: 402 DAAVYTCLITGFGT-QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRI 460
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
+ +MIQ+ + P ++ ++ + R + A+++EM + G P+ +YT LI G
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIG 520
Query: 571 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR------IGEKNKLFGEMKANCI 624
A + +EM KG+ ++ Y A +H+ G+ + ++ K G+ A I
Sbjct: 521 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEI 580
Query: 625 L 625
Sbjct: 581 F 581
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 149/373 (39%), Gaps = 15/373 (4%)
Query: 139 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 198
F + +K FA+ + A +F K ++ + + N LL L L
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 199 METGPLPNIHTYTIMMSCGDIRL-----AAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
E PN+ TYT++++ G R+ AA I + G P +V + + GL
Sbjct: 291 KERF-TPNMMTYTVLLN-GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRK 348
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
A KL + K N + +I FC++ ++ A+E ++M S PD Y
Sbjct: 349 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 408
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
L+ F + + P Y +LI L N Q++ + + +YN M
Sbjct: 409 LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN----QKMPEHATRIYNKM 464
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
+QN I P+ N I++ + + + E+ ++GI + SY +I + E
Sbjct: 465 IQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKS 524
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTT 493
+ A + ML + + +++Y+ + F + E+ E L R +G + +
Sbjct: 525 REACRYLEEMLDKGMKTPLIDYNKFAADFHR-GGQPEIFEELAQRAKFSGKFAAAEIFAR 583
Query: 494 LISIHGRTRKRHK 506
+ TR+R K
Sbjct: 584 WAQM---TRRRFK 593
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 78/175 (44%), Gaps = 35/175 (20%)
Query: 481 KAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMN 540
+ G +++TY +++SI +TR+ EM L E ++T + F +E
Sbjct: 188 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERK 246
Query: 541 VACALFQEMSR---------IGCL-------------------------PNLYTYTCLID 566
A +F+ M + I CL PN+ TYT L++
Sbjct: 247 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLN 306
Query: 567 GFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 621
G+C++ + A +++++M +G+ PD+V + V++ + + + KLF MK+
Sbjct: 307 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKS 361
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 137/306 (44%), Gaps = 6/306 (1%)
Query: 225 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 284
+L + +G P VT +R LCE G VD A L+++L K P +++ +N ++ C
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 285 QRGAVNEALEVLEEMKSS-RTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 343
+ ++ E ++EM+ PD+ S+ +L++ C ++ KP
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265
Query: 344 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 403
Y +++ KG + ++ VY M + + P+ I N ++ + G+ EA
Sbjct: 266 FLYNTIMKGFCTLSKGSE----AVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARM 321
Query: 404 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 463
L+ + G + +Y +++ +C++ AL L+ M R P Y+TL+ G
Sbjct: 322 YLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLC 381
Query: 464 KEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDE 523
K + + +E L+ + +G+ + Y TL+ ++ K +AY F + S D
Sbjct: 382 KARLMDKGME-LYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDA 440
Query: 524 VSYTAL 529
+Y+ L
Sbjct: 441 SAYSTL 446
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 121/284 (42%), Gaps = 37/284 (13%)
Query: 369 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 428
V N M+ N + P+ + + +R C G+ EA L+++ E+ + Y+YN ++ +C
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 429 K------------------ESYPKM------------------ALELMPRMLKRNVLPGV 452
K + P + A+ L+ ++ P
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDC 265
Query: 453 VNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFG 512
Y+T++ GF E V ++ ++ + G+ + TY TLI + + +A
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVG-VYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Query: 513 EMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 572
M+ + PD +YT+L+ C E A +L +EM GC PN TY L+ G CK
Sbjct: 325 TMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKAR 384
Query: 573 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 616
+D +L++ MK G+ + Y L+ K G++ E ++F
Sbjct: 385 LMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 118/281 (41%), Gaps = 10/281 (3%)
Query: 217 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLH-PLNSHC 275
G + A +++ ++ P TY ++ LC+C + V ++ V ++ +
Sbjct: 173 GRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVS 232
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
F +I C + EA+ ++ ++ ++ PD + YN ++ FC
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 336 XCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 393
++P + Y +LI L +++ ++Y K +M+ P+T ++ C
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLK------TMVDAGYEPDTATYTSLMNGMC 346
Query: 394 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 453
R+G+ AL+LLE+ +G N +YN ++H +CK +EL M V
Sbjct: 347 RKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESN 406
Query: 454 NYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTL 494
Y+TL+ K E E +F V + + Y+TL
Sbjct: 407 GYATLVRSLVKSGKVAEAYE-VFDYAVDSKSLSDASAYSTL 446
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 211 TIMMSCGDIRLAAEILG---KIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCK 267
TIM + +E +G K+ G P +TY T I GL + G V+ A ++ +
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 268 LHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 320
+ ++ + ++++G C++G AL +LEEM++ P+ +YN LL+ CK
Sbjct: 330 GYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCK 382
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 4/181 (2%)
Query: 138 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 197
++N ++K F + S A V+ K G+E + N L+ L
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKT 325
Query: 198 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
+++ G P+ TYT +M+ G+ A +L ++ G P TY T + GLC+
Sbjct: 326 MVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARL 385
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
+D +L + L S+ + ++ + G V EA EV + S++ D +Y+
Sbjct: 386 MDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYST 445
Query: 314 L 314
L
Sbjct: 446 L 446
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 85/222 (38%), Gaps = 19/222 (8%)
Query: 117 CKC----------DDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNV 166
CKC D+ + F DL + F +LI ++ L A + N
Sbjct: 205 CKCKDLHVVYEFVDEMRDDFDVKPDL-----VSFTILIDNVCNSKNLREAMYLVSKLGNA 259
Query: 167 GLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLA 222
G + N ++K + E G P+ TY ++ G + A
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Query: 223 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHG 282
L + +G P TY + + G+C G A L+ ++ + N +N ++HG
Sbjct: 320 RMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHG 379
Query: 283 FCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDV 324
C+ +++ +E+ E MKSS + Y L+ + K G V
Sbjct: 380 LCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKV 421
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 157/373 (42%), Gaps = 66/373 (17%)
Query: 206 NIHTYTIMMSCGDIRLAA-----EILGKIYRS---GGNPTVVTYGTYIRGLCECGYVDVA 257
N TY ++++ R AA E +G R G + +V + + LC +V+ A
Sbjct: 177 NEKTYEVLLN----RYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFA 232
Query: 258 HKLV----RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
L R+ C + +N +++G+C G V+EA +++ +S+ PDV SY
Sbjct: 233 ETLFCSRRREFGCDIKAMN-----MILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGT 287
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
++NA KKG + K++E+Y +M
Sbjct: 288 MINALTKKGKLG---------------------------------------KAMELYRAM 308
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
P+ ICN+++ C + + EAL + + E+G + N +YN ++ +CK
Sbjct: 309 WDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRT 368
Query: 434 KMALELMPRMLKR--NVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
+ EL+ M + + P V +S L+ +++ + ++V R+ K + Y
Sbjct: 369 EKVWELVEEMELKGGSCSPNDVTFSYLLK-YSQRSKDVDIV---LERMAKNKCEMTSDLY 424
Query: 492 TTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR 551
+ ++ + K K + EM +S L PD+ +YT I ++ A + FQEM
Sbjct: 425 NLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMS 484
Query: 552 IGCLPNLYTYTCL 564
G +P T L
Sbjct: 485 KGMVPEPRTEMLL 497
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 123/295 (41%), Gaps = 45/295 (15%)
Query: 307 DVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKS 366
D+ + NM+LN +C G+V + +P +V+Y ++I N L + K+
Sbjct: 246 DIKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMI----NALTKKGKLGKA 301
Query: 367 LEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHM 426
+E+Y +M P+ ICN+++ C + + EAL + + E+G + N +YN ++
Sbjct: 302 MELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKH 361
Query: 427 ICKESYPKMALELMPRMLKR--NVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGI 484
+CK + EL+ M + + P V +S L+ +++ + ++V R+ K
Sbjct: 362 LCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLK-YSQRSKDVDIV---LERMAKNKC 417
Query: 485 TFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACA 544
+ Y + ++ + K K +RE
Sbjct: 418 EMTSDLYNLMFRLYVQWDKEEK-----------------------------VRE------ 442
Query: 545 LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 599
++ EM R G P+ TYT I G I A F EM KG+ P+ T +L
Sbjct: 443 IWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLL 497
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/358 (21%), Positives = 148/358 (41%), Gaps = 19/358 (5%)
Query: 268 LHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXX 327
+H +S +N ++ + E +V +EM F + +Y +LLN + V
Sbjct: 138 VHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEA 197
Query: 328 XXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRP---NTI 383
I +V + L++ LC+ K +E ++ + R +
Sbjct: 198 VGVFERRKEFGIDDDLVAFHGLLMWLCRYK---------HVEFAETLFCSRRREFGCDIK 248
Query: 384 ICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRM 443
N IL C G EA +D + SY +I+ + K+ A+EL M
Sbjct: 249 AMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAM 308
Query: 444 LKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRK 503
P V + +I ++ E +E +F + + G N TY +L+ + R+
Sbjct: 309 WDTRRNPDVKICNNVIDALCFKKRIPEALE-VFREISEKGPDPNVVTYNSLLKHLCKIRR 367
Query: 504 RHKAYCRFGEM-IQSCLC-PDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTY 561
K + EM ++ C P++V+++ L+ +++++ + + M++ C Y
Sbjct: 368 TEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDI---VLERMAKNKCEMTSDLY 424
Query: 562 TCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
+ + + D + +++ EM+R G+ PD TYT+ I H G+IGE F EM
Sbjct: 425 NLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEM 482
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 155/377 (41%), Gaps = 27/377 (7%)
Query: 246 RGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF 305
+ LC+CG+ L+ N +IH + + + E R +
Sbjct: 188 KRLCDCGFT----------------LSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIY 231
Query: 306 PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDK 365
P+ + +++ CK+G + + PS++ TSL+ +++ ++
Sbjct: 232 PNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMR----IEE 287
Query: 366 SLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIH 425
S+ + +L + +TI + ++ +EG A + ++ ++G + N + Y +
Sbjct: 288 SMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFVR 347
Query: 426 MICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK---EQSNFEMVERLFTRLVKA 482
+ C++ K A L+ M + V P ++ LI GFA+ E+ E E + TR
Sbjct: 348 VCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTR---- 403
Query: 483 GITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVA 542
G+ + + ++ + ++A + I PDE +Y+ LI F +++ A
Sbjct: 404 GLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQA 463
Query: 543 CALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAW 602
LF EM P + LI G C ++ + MK++ I P+ Y LI
Sbjct: 464 LKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKA 523
Query: 603 YHKHGRIGEKNKLFGEM 619
+ K G ++++ EM
Sbjct: 524 FQKIGDKTNADRVYNEM 540
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 130/299 (43%), Gaps = 36/299 (12%)
Query: 361 QLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSY 420
++ D +Y + I PN I +++V C+EG+ +E + LL+ + +
Sbjct: 213 KIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVN 272
Query: 421 NEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLV 480
++ + +E + ++ L+ R+L +N++ + YS ++ AKE + ++F ++
Sbjct: 273 TSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKE-GDLVSARKVFDEML 331
Query: 481 KAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVF------- 533
+ G + N+ YT + + +A EM +S + P + ++ LI F
Sbjct: 332 QRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEE 391
Query: 534 -----CNI---REMNVACALFQEM----SRI----------------GCLPNLYTYTCLI 565
C + R + +C+ F EM S+I G +P+ +TY+ LI
Sbjct: 392 KGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLI 451
Query: 566 DGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 624
GF + + ID A +LF EM+ + + P + LI G++ K MK I
Sbjct: 452 RGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLI 510
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/443 (19%), Positives = 171/443 (38%), Gaps = 14/443 (3%)
Query: 80 THGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLD---LPHHS 136
T H + + + IH A + ++ AL+ + D +LLD + +
Sbjct: 106 TRNLRHGIKSYALTIHILVKARLLIDARALIESSLLNSPPDSDL--VDSLLDTYEISSST 163
Query: 137 VLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXX 196
LVF++L++ +A LE VF + G L + + N L+
Sbjct: 164 PLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYE 223
Query: 197 XLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECG 252
++ PN T IM+ G ++ ++L +I P+V+ + + + E
Sbjct: 224 CAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEM 283
Query: 253 YVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 312
++ + L+++L K +++ ++ V++ + G + A +V +EM + + Y
Sbjct: 284 RIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYT 343
Query: 313 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNS 372
+ + C+KGDV + P + LI +K LE
Sbjct: 344 VFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLI----GGFARFGWEEKGLEYCEV 399
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
M+ + P+ N +++ + A +L ++G ++++Y+ +I + +
Sbjct: 400 MVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGND 459
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
AL+L M R + PG + +LI G E E+ + K I N Y
Sbjct: 460 IDQALKLFYEMEYRKMSPGFEVFRSLIVGLCT-CGKVEAGEKYLKIMKKRLIEPNADIYD 518
Query: 493 TLISIHGRTRKRHKAYCRFGEMI 515
LI + + A + EMI
Sbjct: 519 ALIKAFQKIGDKTNADRVYNEMI 541
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 155/363 (42%), Gaps = 19/363 (5%)
Query: 272 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 331
+S +N+++ + + VLEEM ++ + ++ + + AF +
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLTMETFTIAMKAFAAAKERKKAVGIF 251
Query: 332 XXXXXCQIKPSIVNYTSLI-LLCKNKL--KGQQLYDKSLEVYNSMLQNAIRPNTIICNHI 388
+ K + L+ L + KL + Q L+DK L+ PN + +
Sbjct: 252 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK--------LKERFTPNMMTYTVL 303
Query: 389 LRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV 448
L CR EA + D + G+ + ++N ++ + + A++L M +
Sbjct: 304 LNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGP 363
Query: 449 LPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAY 508
P V +Y+ +I F K QS+ E F +V +G+ + YT LI+ G +K Y
Sbjct: 364 CPNVRSYTIMIRDFCK-QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVY 422
Query: 509 CRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGF 568
EM + PD +Y ALI + N + ++ +M + P+++T+ ++ +
Sbjct: 423 ELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY 482
Query: 569 CKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 628
++ ++DEM +KGI PD +YTVLI G+ E + EM LD
Sbjct: 483 FVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM------LDK 536
Query: 629 GIK 631
G+K
Sbjct: 537 GMK 539
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 151/361 (41%), Gaps = 12/361 (3%)
Query: 271 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 330
L F + F +A+ + E MK + V + N LL++ + +
Sbjct: 226 LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQV 284
Query: 331 XXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 390
+ P+++ YT +L + + L + + ++N M+ + ++P+ + N +L
Sbjct: 285 LFDKLKERFTPNMMTYT---VLLNGWCRVRNLIEAA-RIWNDMIDHGLKPDIVAHNVMLE 340
Query: 391 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 450
R + +A+ L +G N SY +I CK+S + A+E M+ + P
Sbjct: 341 GLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQP 400
Query: 451 GVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCR 510
Y+ LI+GF Q + V L + + G + KTY LI + +
Sbjct: 401 DAAVYTCLITGFGT-QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 459
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
+ +MIQ+ + P ++ ++ + R + A++ EM + G P+ +YT LI G
Sbjct: 460 YNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLIS 519
Query: 571 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR------IGEKNKLFGEMKANCI 624
A + +EM KG+ ++ Y A +H+ G+ + ++ K G+ A I
Sbjct: 520 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEI 579
Query: 625 L 625
Sbjct: 580 F 580
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 140/350 (40%), Gaps = 12/350 (3%)
Query: 139 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 198
F + +K FA+ + A +F K ++ + + N LL L L
Sbjct: 230 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 289
Query: 199 METGPLPNIHTYTIMMSCGDIRL-----AAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
E PN+ TYT++++ G R+ AA I + G P +V + + GL
Sbjct: 290 KERF-TPNMMTYTVLLN-GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMK 347
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
A KL + K N + +I FC++ ++ A+E ++M S PD Y
Sbjct: 348 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 407
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
L+ F + + P Y +LI L N Q++ + +YN M
Sbjct: 408 LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN----QKMPEHGTRIYNKM 463
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
+QN I P+ N I++ + + + ++ ++GI + SY +I + E
Sbjct: 464 IQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS 523
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAG 483
+ A + ML + + +++Y+ + F + E+ E L R +G
Sbjct: 524 REACRYLEEMLDKGMKTPLIDYNKFAADFHR-GGQPEIFEELAQRAKFSG 572
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 77/175 (44%), Gaps = 35/175 (20%)
Query: 481 KAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMN 540
+ G +++TY +++SI +TR+ EM L E ++T + F +E
Sbjct: 187 RQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLTME-TFTIAMKAFAAAKERK 245
Query: 541 VACALFQEMSR---------IGCL-------------------------PNLYTYTCLID 566
A +F+ M + I CL PN+ TYT L++
Sbjct: 246 KAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMMTYTVLLN 305
Query: 567 GFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 621
G+C++ + A +++++M G+ PD+V + V++ + + + KLF MK+
Sbjct: 306 GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKS 360
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 120/251 (47%), Gaps = 2/251 (0%)
Query: 362 LYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYN 421
LY+K++E + M + + P+ + + IL V+ + G+ E L+L E G + +++
Sbjct: 236 LYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFS 295
Query: 422 EIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVK 481
+ M + ++ M +V P VV Y+TL+ + + LF +++
Sbjct: 296 VLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGR-AGKPGLARSLFNEMLE 354
Query: 482 AGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNV 541
AG+T N KT T L+ I+G+ R A + EM D + Y L+ + +I
Sbjct: 355 AGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEE 414
Query: 542 ACALFQEMSR-IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
A LF +M + C P+ ++YT +++ + + A +LF+EM + G+ +V+ T L+
Sbjct: 415 AERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLV 474
Query: 601 AWYHKHGRIGE 611
K RI +
Sbjct: 475 QCLGKAKRIDD 485
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 114/253 (45%), Gaps = 2/253 (0%)
Query: 368 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
E+ M+++ + + I + I+ R + +A+ E ++ G+ ++ +Y+ I+ +
Sbjct: 207 EMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVY 266
Query: 428 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFN 487
K + L L R + P + +S L F E +++ + + + + N
Sbjct: 267 SKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFG-EAGDYDGIRYVLQEMKSMDVKPN 325
Query: 488 TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQ 547
Y TL+ GR K A F EM+++ L P+E + TAL+ ++ R A L++
Sbjct: 326 VVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWE 385
Query: 548 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK-GIFPDVVTYTVLIAWYHKH 606
EM + Y L++ I + A +LF++MK PD +YT ++ Y
Sbjct: 386 EMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSG 445
Query: 607 GRIGEKNKLFGEM 619
G+ + +LF EM
Sbjct: 446 GKAEKAMELFEEM 458
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 115/271 (42%), Gaps = 5/271 (1%)
Query: 351 LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREG-QFREALTLLEDFH 409
LL N L+ Q K+ +N + ++ P I ++ R G QF+ + +
Sbjct: 157 LLVLNSLREWQ---KTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMV 213
Query: 410 EQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNF 469
+ G+ L+ +Y+ II + + A+E RM K ++P V YS ++ ++K
Sbjct: 214 KDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSK-SGKV 272
Query: 470 EMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTAL 529
E V L+ R V G + ++ L + G EM + P+ V Y L
Sbjct: 273 EEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTL 332
Query: 530 IAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 589
+ + +A +LF EM G PN T T L+ + K + A QL++EMK K
Sbjct: 333 LEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKW 392
Query: 590 FPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
D + Y L+ G E +LF +MK
Sbjct: 393 PMDFILYNTLLNMCADIGLEEEAERLFNDMK 423
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 123/305 (40%), Gaps = 43/305 (14%)
Query: 290 NEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSL 349
N+A+E E M + PD +Y+ +L+ + K G V KP + ++ L
Sbjct: 238 NKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVL 297
Query: 350 ILLCKNKLKGQQ-LYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 408
K+ G+ YD V M ++PN ++ N +L R G+ A +L +
Sbjct: 298 -----GKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEM 352
Query: 409 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN 468
E G+ N+ + ++ + K + + AL+L M + + Y+TL++ A +
Sbjct: 353 LEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCA-DIGL 411
Query: 469 FEMVERLFTRLVKA-GITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYT 527
E ERLF + ++ + +YT +++I+G K KA
Sbjct: 412 EEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAM------------------- 452
Query: 528 ALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK 587
LF+EM + G N+ TCL+ K ID +FD ++
Sbjct: 453 ----------------ELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKR 496
Query: 588 GIFPD 592
G+ PD
Sbjct: 497 GVKPD 501
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 92/194 (47%), Gaps = 5/194 (2%)
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTT 493
+MALE M+K V + YST+I+ AK + + F R+ K G+ + TY+
Sbjct: 207 EMALE----MVKDGVELDNITYSTIITC-AKRCNLYNKAIEWFERMYKTGLMPDEVTYSA 261
Query: 494 LISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIG 553
++ ++ ++ K + + + + PD ++++ L +F + + + QEM +
Sbjct: 262 ILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMD 321
Query: 554 CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKN 613
PN+ Y L++ + LA LF+EM G+ P+ T T L+ Y K +
Sbjct: 322 VKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDAL 381
Query: 614 KLFGEMKANCILLD 627
+L+ EMKA +D
Sbjct: 382 QLWEEMKAKKWPMD 395
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/307 (21%), Positives = 133/307 (43%), Gaps = 10/307 (3%)
Query: 220 RLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH-CKLHPLNSHCFNA 278
+L E+ ++ + G +TY T I C + A + +++ L P + ++A
Sbjct: 203 QLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMP-DEVTYSA 261
Query: 279 VIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ 338
++ + + G V E L + E ++ PD ++++L F + GD
Sbjct: 262 ILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMD 321
Query: 339 IKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 398
+KP++V Y +L+ G+ +SL +N ML+ + PN +++++ +
Sbjct: 322 VKPNVVVYNTLLEAMGR--AGKPGLARSL--FNEMLEAGLTPNEKTLTALVKIYGKARWA 377
Query: 399 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL--PGVVNYS 456
R+AL L E+ + ++ YN +++M + A L M K +V P +Y+
Sbjct: 378 RDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDM-KESVQCRPDNFSYT 436
Query: 457 TLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQ 516
+++ + E LF ++KAG+ N T L+ G+ ++ F I+
Sbjct: 437 AMLNIYGS-GGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIK 495
Query: 517 SCLCPDE 523
+ PD+
Sbjct: 496 RGVKPDD 502
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 154/362 (42%), Gaps = 19/362 (5%)
Query: 273 SHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXX 332
S +N+++ + + VLEEM ++ + ++ + + AF +
Sbjct: 195 SRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLTMETFTIAMKAFAAAKERKKAVGIFE 253
Query: 333 XXXXCQIKPSIVNYTSLI-LLCKNKL--KGQQLYDKSLEVYNSMLQNAIRPNTIICNHIL 389
+ K + L+ L + KL + Q L+DK L+ PN + +L
Sbjct: 254 LMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK--------LKERFTPNMMTYTVLL 305
Query: 390 RVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL 449
CR EA + D + G+ + ++N ++ + + A++L M +
Sbjct: 306 NGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPC 365
Query: 450 PGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYC 509
P V +Y+ +I F K QS+ E F +V +G+ + YT LI+ G +K Y
Sbjct: 366 PNVRSYTIMIRDFCK-QSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYE 424
Query: 510 RFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 569
EM + PD +Y ALI + N + ++ +M + P+++T+ ++ +
Sbjct: 425 LLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYF 484
Query: 570 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDG 629
++ ++DEM +KGI PD +YTVLI G+ E + EM LD G
Sbjct: 485 VARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM------LDKG 538
Query: 630 IK 631
+K
Sbjct: 539 MK 540
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 151/361 (41%), Gaps = 12/361 (3%)
Query: 271 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 330
L F + F +A+ + E MK + V + N LL++ + +
Sbjct: 227 LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQV 285
Query: 331 XXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 390
+ P+++ YT +L + + L + + ++N M+ + ++P+ + N +L
Sbjct: 286 LFDKLKERFTPNMMTYT---VLLNGWCRVRNLIEAA-RIWNDMIDHGLKPDIVAHNVMLE 341
Query: 391 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 450
R + +A+ L +G N SY +I CK+S + A+E M+ + P
Sbjct: 342 GLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQP 401
Query: 451 GVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCR 510
Y+ LI+GF Q + V L + + G + KTY LI + +
Sbjct: 402 DAAVYTCLITGFGT-QKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRI 460
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
+ +MIQ+ + P ++ ++ + R + A++ EM + G P+ +YT LI G
Sbjct: 461 YNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLIS 520
Query: 571 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR------IGEKNKLFGEMKANCI 624
A + +EM KG+ ++ Y A +H+ G+ + ++ K G+ A I
Sbjct: 521 EGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAAAEI 580
Query: 625 L 625
Sbjct: 581 F 581
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 140/350 (40%), Gaps = 12/350 (3%)
Query: 139 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 198
F + +K FA+ + A +F K ++ + + N LL L L
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 199 METGPLPNIHTYTIMMSCGDIRL-----AAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
E PN+ TYT++++ G R+ AA I + G P +V + + GL
Sbjct: 291 KERF-TPNMMTYTVLLN-GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMK 348
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
A KL + K N + +I FC++ ++ A+E ++M S PD Y
Sbjct: 349 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 408
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
L+ F + + P Y +LI L N Q++ + +YN M
Sbjct: 409 LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN----QKMPEHGTRIYNKM 464
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
+QN I P+ N I++ + + + ++ ++GI + SY +I + E
Sbjct: 465 IQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS 524
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAG 483
+ A + ML + + +++Y+ + F + E+ E L R +G
Sbjct: 525 REACRYLEEMLDKGMKTPLIDYNKFAADFHR-GGQPEIFEELAQRAKFSG 573
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 160/385 (41%), Gaps = 18/385 (4%)
Query: 240 TYGTYIRGLCECGYVDVAHKLVRKLH----CKLHPLNSHCFNAVIHGFCQRGAVNEALEV 295
TY + L +C D+ +LV +++ KL L++ + V+ + G N+A++
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDT--MSKVMRRLAKSGKYNKAVDA 225
Query: 296 LEEM-KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLC 353
EM KS D + N L++A K+ + IKP + LI C
Sbjct: 226 FLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTFNILIHGFC 284
Query: 354 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 413
K + +D + + + M P+ + + +C+EG FR +LE+ E G
Sbjct: 285 K-----ARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGC 339
Query: 414 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 473
N N +Y ++H + K AL + +M + +P YS+LI +K F+
Sbjct: 340 NPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSK-TGRFKDAA 398
Query: 474 RLFTRLVKAGITFNTKTYTTLISI---HGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALI 530
+F + G+ + Y T+IS H R + R + P+ +Y L+
Sbjct: 399 EIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLL 458
Query: 531 AVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIF 590
+ C+ ++M + L M + ++ TY LI G C ++ A F+E RKG+
Sbjct: 459 KMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMV 518
Query: 591 PDVVTYTVLIAWYHKHGRIGEKNKL 615
P T +L+ K K K+
Sbjct: 519 PRDSTCKMLVDELEKKNMAEAKLKI 543
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 2/180 (1%)
Query: 448 VLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKA 507
V + ++L+ KE S E +F +L I + +T+ LI + RK A
Sbjct: 235 VKTDTIAMNSLMDALVKENS-IEHAHEVFLKLFDT-IKPDARTFNILIHGFCKARKFDDA 292
Query: 508 YCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDG 567
M + PD V+YT+ + +C + + +EM GC PN+ TYT ++
Sbjct: 293 RAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHS 352
Query: 568 FCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
K + A ++++MK G PD Y+ LI K GR + ++F +M + D
Sbjct: 353 LGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRD 412
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/314 (20%), Positives = 122/314 (38%), Gaps = 51/314 (16%)
Query: 363 YDKSLEVYNSMLQN-AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYN 421
Y+K+++ + M ++ ++ +TI N ++ +E A + + I + ++N
Sbjct: 219 YNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTFN 277
Query: 422 EIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVK 481
+IH CK A +M M P VV Y++ + + KE +F V + + +
Sbjct: 278 ILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKE-GDFRRVNEMLEEMRE 336
Query: 482 AGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNV 541
G N TYT ++ G++++ +A + +M + PD Y++LI +
Sbjct: 337 NGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKD 396
Query: 542 ACALFQEMSRIG--------------------------------------CLPNLYTYTC 563
A +F++M+ G C PN+ TY
Sbjct: 397 AAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAP 456
Query: 564 LIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANC 623
L+ C + L L M + + DV TY +LI G++ E C
Sbjct: 457 LLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEA----------C 506
Query: 624 ILLDDGIKKLQDPK 637
+ ++ ++K P+
Sbjct: 507 LFFEEAVRKGMVPR 520
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 94/210 (44%), Gaps = 23/210 (10%)
Query: 422 EIIHMICKESYPKM-ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLV 480
E+++ + K K+ L+ M ++++R G Y+ + F + + ++
Sbjct: 187 ELVNEMNKNEESKLVTLDTMSKVMRRLAKSG--KYNKAVDAFLEMEKSY----------- 233
Query: 481 KAGITFNTKTYTTLISI---HGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIR 537
G+ +T +L+ H+ + + + I+ PD ++ LI FC R
Sbjct: 234 --GVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIK----PDARTFNILIHGFCKAR 287
Query: 538 EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYT 597
+ + A A+ M P++ TYT ++ +CK ++ +EM+ G P+VVTYT
Sbjct: 288 KFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYT 347
Query: 598 VLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
+++ K ++ E ++ +MK + + D
Sbjct: 348 IVMHSLGKSKQVAEALGVYEKMKEDGCVPD 377
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 6/206 (2%)
Query: 116 YCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSC 175
Y K D+F + + ++ N L+ + +EHAH+VF+ + ++ R+
Sbjct: 219 YNKAVDAFLEMEKSYGVKTDTI-AMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTF 276
Query: 176 NFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYR 231
N L+ + T P++ TYT + GD R E+L ++
Sbjct: 277 NILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRE 336
Query: 232 SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 291
+G NP VVTY + L + V A + K+ ++ ++++IH + G +
Sbjct: 337 NGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKD 396
Query: 292 ALEVLEEMKSSRTFPDVYSYNMLLNA 317
A E+ E+M + DV YN +++A
Sbjct: 397 AAEIFEDMTNQGVRRDVLVYNTMISA 422
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/419 (21%), Positives = 165/419 (39%), Gaps = 21/419 (5%)
Query: 219 IRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNA 278
I A ++ K+ R G N + Y I GLC+ +++A L ++ P +
Sbjct: 299 IDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGK 358
Query: 279 VIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK--------------GDV 324
++ F + ++ EV+ ++ + Y L F + G+
Sbjct: 359 LLCSFSEESELSRITEVIIGDIDKKSV--MLLYKSLFEGFIRNDLVHEAYSFIQNLMGNY 416
Query: 325 XXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTII 384
+I+ + + + N L D ++ + + ++QN + P ++
Sbjct: 417 ESDGVSEIVKLLKDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMM 476
Query: 385 CNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRML 444
N+I+ C+EG+ E+L LL + + G+ +Q++ N I + + AL+L+ +M
Sbjct: 477 YNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMR 536
Query: 445 KRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKR 504
P + + + L+ + + + L AG F + +I G +
Sbjct: 537 FYGFEPWIKHTTFLVKKLCENGRAVDACKYLDD---VAGEGFLGHMVASTAAIDGLIKNE 593
Query: 505 --HKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYT 562
+ F ++ + CPD ++Y LI C A LF EM G P + TY
Sbjct: 594 GVDRGLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYN 653
Query: 563 CLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 621
+IDG+CK ID M PDV+TYT LI GR E + EMK
Sbjct: 654 SMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKG 712
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 111/548 (20%), Positives = 193/548 (35%), Gaps = 63/548 (11%)
Query: 113 IVGYCKCDDSFEQFSTLLDLPHHSVLV----FNVLIKVFASNSMLEHAHQVFVSAKNVGL 168
+V +CK + F + L + + + VLI F S ++ A Q+F + +G+
Sbjct: 255 VVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGM 314
Query: 169 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCGD-----IRLAA 223
I + L+ L + +G P+ ++ R+
Sbjct: 315 NADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITE 374
Query: 224 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKL------------------H 265
I+G I + ++ Y + G V A+ ++ L H
Sbjct: 375 VIIGDIDKKS---VMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDH 431
Query: 266 CKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVX 325
K +S + VI+ + V+ A+ +L ++ + P YN ++ CK+G
Sbjct: 432 NKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSE 491
Query: 326 XXXXXXXXXXXCQIKPSIVN----YTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 381
++PS Y L C + +L++ M P
Sbjct: 492 ESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCD--------FVGALDLLKKMRFYGFEPW 543
Query: 382 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMP 441
+++ C G+ +A L+D +G + + I + K LEL
Sbjct: 544 IKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFR 603
Query: 442 RMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRT 501
+ P V+ Y LI K E + LF +V G+ TY ++I
Sbjct: 604 DICANGHCPDVIAYHVLIKALCKACRTME-ADILFNEMVSKGLKPTVATYNSMID----- 657
Query: 502 RKRHKAYCRFGEMIQSCLC----------PDEVSYTALIAVFCNIREMNVACALFQEMSR 551
+C+ GE+ + C PD ++YT+LI C + A + EM
Sbjct: 658 -----GWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKG 712
Query: 552 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
C PN T+ LI G CK + A F EM+ K + PD Y L++ + I
Sbjct: 713 KDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINA 772
Query: 612 KNKLFGEM 619
+F EM
Sbjct: 773 GFGIFREM 780
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 87/183 (47%), Gaps = 2/183 (1%)
Query: 449 LPGVVNYSTLISGFAKE-QSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKA 507
+P Y+ L+ +K S+ E+VE + G F+ T T ++ ++ T K +A
Sbjct: 174 VPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERA 233
Query: 508 YCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDG 567
F E++ + +S T L+ FC +++ A L + + N TY LI G
Sbjct: 234 LSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHG 292
Query: 568 FCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
F K ID A QLF++M+R G+ D+ Y VLI KH + L+ E+K + I D
Sbjct: 293 FVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPD 352
Query: 628 DGI 630
GI
Sbjct: 353 RGI 355
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 136/331 (41%), Gaps = 15/331 (4%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
+N +I G C+ G E+L++L EMK + P ++ N + ++ D
Sbjct: 477 YNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMR 536
Query: 336 XCQIKPSIVNYTSLIL-LCKNKLKGQQ---LYDKSLEVY-NSMLQNAIRPNTIICNHILR 390
+P I + T L+ LC+N L D + E + M+ + + +I N
Sbjct: 537 FYGFEPWIKHTTFLVKKLCENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKN---- 592
Query: 391 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 450
EG R L L D G + +Y+ +I +CK A L M+ + + P
Sbjct: 593 ----EGVDR-GLELFRDICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKP 647
Query: 451 GVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCR 510
V Y+++I G+ KE + R+ + + TYT+LI + + +A R
Sbjct: 648 TVATYNSMIDGWCKE-GEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFR 706
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
+ EM P+ +++ ALI C A F+EM P+ Y L+ F
Sbjct: 707 WNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLS 766
Query: 571 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 601
+ I+ +F EM KG FP V ++A
Sbjct: 767 SENINAGFGIFREMVHKGRFPVSVDRNYMLA 797
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 160/399 (40%), Gaps = 45/399 (11%)
Query: 237 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHP--LNSHCFNAVIHGFCQRGAVNEALE 294
+V Y + I L + D A L+ ++ K P +NS +I +C V +A+
Sbjct: 160 SVREYHSMISILGKMRKFDTAWTLIDEMR-KFSPSLVNSQTLLIMIRKYCAVHDVGKAIN 218
Query: 295 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 354
K + + + LL+A C+ +V + LI K
Sbjct: 219 TFHAYKRFKLEMGIDDFQSLLSALCRYKNVS-------------------DAGHLIFCNK 259
Query: 355 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 414
+K Y + +N +L CN I G REA + + G+
Sbjct: 260 DK------YPFDAKSFNIVLNGW-------CNVI-------GSPREAERVWMEMGNVGVK 299
Query: 415 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVER 474
+ SY+ +I K L+L RM K + P Y+ ++ AK E
Sbjct: 300 HDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNL 359
Query: 475 LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFC 534
+ T + GI N TY +LI + RK +A F EM++ L P +Y A + +
Sbjct: 360 MKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRI-- 417
Query: 535 NIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 594
+R L +M ++GC P + TY LI C+ D L+DEMK K + PD+
Sbjct: 418 -LRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLS 476
Query: 595 TYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKL 633
+Y V+I +G+I E + EMK + ++ ++ +
Sbjct: 477 SYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDM 515
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 6/187 (3%)
Query: 139 VFNVLIKVFASNSMLEHAHQVFVS-AKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 197
V+N ++ A S + A + + + G+E ++ + N L+K L
Sbjct: 339 VYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDE 398
Query: 198 LMETGPLPNIHTYTIMMSCGDIRLAAEI---LGKIYRSGGNPTVVTYGTYIRGLCECGYV 254
++E G P I TY M +R E+ L K+ + G PTV TY IR LC
Sbjct: 399 MLEKGLFPTIRTYHAFMRI--LRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDF 456
Query: 255 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 314
D L ++ K + + +IHG G + EA +EMK P+ +M+
Sbjct: 457 DNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMI 516
Query: 315 LNAFCKK 321
+ F K
Sbjct: 517 QSWFSGK 523
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 88/210 (41%), Gaps = 8/210 (3%)
Query: 217 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 276
G R A + ++ G VV+Y + I + G ++ KL ++ + + +
Sbjct: 281 GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVY 340
Query: 277 NAVIHGFCQRGAVNEALEVLEEMKSSRTF-PDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
NAV+H + V+EA +++ M+ + P+V +YN L+ CK
Sbjct: 341 NAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEML 400
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
+ P+I Y + + + + G++++ E+ M + P ++R CR
Sbjct: 401 EKGLFPTIRTYHAFMRILRT---GEEVF----ELLAKMRKMGCEPTVETYIMLIRKLCRW 453
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIH 425
F L L ++ E+ + + SY +IH
Sbjct: 454 RDFDNVLLLWDEMKEKTVGPDLSSYIVMIH 483
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 147/363 (40%), Gaps = 13/363 (3%)
Query: 231 RSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVN 290
+ G T Y I L + + LV + K L+ F + + + V
Sbjct: 121 QKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKAK-KLLSKETFALISRRYARARKVK 179
Query: 291 EALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI 350
EA+ +M+ + +N +L+ K +V + +P I +YT L+
Sbjct: 180 EAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILL 239
Query: 351 LLCKNKLKGQQL-YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFH 409
+ GQ+L + EV M P+ + I+ HC+ ++ EA+ +
Sbjct: 240 -----EGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEME 294
Query: 410 EQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNF 469
++ + + + +I+ + E ALE R Y+ L+ + Q
Sbjct: 295 QRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQ-RM 353
Query: 470 EMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVS-YTA 528
E + + G+ N +TY ++ R ++ +AY E+ Q+ C VS Y
Sbjct: 354 EDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAY----EVYQTMSCEPTVSTYEI 409
Query: 529 LIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKG 588
++ +FCN +++A ++ EM G LP ++ ++ LI C + +D A + F+EM G
Sbjct: 410 MVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVG 469
Query: 589 IFP 591
I P
Sbjct: 470 IRP 472
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 1/213 (0%)
Query: 388 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 447
I R + R + +EA+ E G + +N ++ + K A ++ +M K+
Sbjct: 168 ISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKR 227
Query: 448 VLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKA 507
P + +Y+ L+ G+ +E N V+ + + G + Y +I+ H + +K +A
Sbjct: 228 FEPDIKSYTILLEGWGQEL-NLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEA 286
Query: 508 YCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDG 567
F EM Q P + +LI + +++N A F+ G TY L+
Sbjct: 287 IRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGA 346
Query: 568 FCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
+C ++ A + DEM+ KG+ P+ TY +++
Sbjct: 347 YCWSQRMEDAYKTVDEMRLKGVGPNARTYDIIL 379
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/383 (20%), Positives = 151/383 (39%), Gaps = 36/383 (9%)
Query: 77 WVETH-GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHH 135
W E GF H+ + + +I + ++ F L+ +V K LL
Sbjct: 117 WAENQKGFKHTTSNYNALIESLG----KIKQFKLIWSLVDDMKA-------KKLL----- 160
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
S F ++ + +A ++ A F + G ++ N +L L
Sbjct: 161 SKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVF 220
Query: 196 XXLMETGPLPNIHTYTIMMSCGDIRL----AAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
+ + P+I +YTI++ L E+ ++ G P VV YG I C+
Sbjct: 221 DKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKA 280
Query: 252 GYVDVAHKLVRKL---HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFP-D 307
+ A + ++ +CK P H F ++I+G +N+ALE E KSS FP +
Sbjct: 281 KKYEEAIRFFNEMEQRNCKPSP---HIFCSLINGLGSEKKLNDALEFFERSKSS-GFPLE 336
Query: 308 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSL 367
+YN L+ A+C + + P+ Y ++ + L Q ++
Sbjct: 337 APTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIIL----HHLIRMQRSKEAY 392
Query: 368 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
EVY +M + P ++R+ C + + A+ + ++ +G+ + ++ +I +
Sbjct: 393 EVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITAL 449
Query: 428 CKESYPKMALELMPRMLKRNVLP 450
C E+ A E ML + P
Sbjct: 450 CHENKLDEACEYFNEMLDVGIRP 472
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 122/278 (43%), Gaps = 9/278 (3%)
Query: 340 KPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFR 399
K S+ Y+S I K G + K+LE+Y S+ + + N ICN IL + G+
Sbjct: 129 KISVSTYSSCI-----KFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLD 183
Query: 400 EALTLLEDFHEQGINLNQYSYNEIIH--MICKESYPKMALELMPRMLKRNVLPGVVNYST 457
+ L + G+ + +YN ++ + K YPK A+EL+ + + V Y T
Sbjct: 184 SCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPK-AIELIGELPHNGIQMDSVMYGT 242
Query: 458 LISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQS 517
+++ E E ++ G + N Y++L++ + KA EM
Sbjct: 243 VLA-ICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSI 301
Query: 518 CLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLA 577
L P++V T L+ V+ + + L E+ G N Y L+DG K ++ A
Sbjct: 302 GLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEA 361
Query: 578 TQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL 615
+FD+MK KG+ D +++I+ + R E +L
Sbjct: 362 RSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKEL 399
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 140/324 (43%), Gaps = 4/324 (1%)
Query: 283 FCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPS 342
F V++ALE+ + + T +VY N +L+ K G + +KP
Sbjct: 141 FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPD 200
Query: 343 IVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREAL 402
+V Y +L+ C +K + Y K++E+ + N I+ ++++ +L + G+ EA
Sbjct: 201 VVTYNTLLAGC---IKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAE 257
Query: 403 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 462
++ +G + N Y Y+ +++ + K A ELM M ++P V +TL+ +
Sbjct: 258 NFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVY 317
Query: 463 AKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPD 522
K F+ L + L AG N Y L+ + K +A F +M + D
Sbjct: 318 IK-GGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSD 376
Query: 523 EVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 582
+ + +I+ C + A L ++ +L ++ +C+ ++ ++
Sbjct: 377 GYANSIMISALCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMK 436
Query: 583 EMKRKGIFPDVVTYTVLIAWYHKH 606
+M + + PD T+ +LI ++ K
Sbjct: 437 KMDEQAVSPDYNTFHILIKYFIKE 460
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/431 (18%), Positives = 170/431 (39%), Gaps = 28/431 (6%)
Query: 41 SSVSPVPETNRELFHVVVRVIKSLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMA 100
++V+ P + R + R KS ++ R F S ++ V +I+ F ++
Sbjct: 54 ANVAEAPRSKRHSNSYLAR--KSAISEVQRSSDFLSSLQRLATVLKVQDLNVILRDFGIS 111
Query: 101 GMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVF 160
G + D + F + SV ++ IK F + A +++
Sbjct: 112 G----------------RWQDLIQLFEWMQQHGKISVSTYSSCIK-FVGAKNVSKALEIY 154
Query: 161 VSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTY-TIMMSCGDI 219
S + ++++ CN +L CL + G P++ TY T++ C +
Sbjct: 155 QSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKV 214
Query: 220 R----LAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHC 275
+ A E++G++ +G V YGT + G + A ++++ + H N +
Sbjct: 215 KNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYH 274
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
++++++ + +G +A E++ EMKS P+ LL + K G
Sbjct: 275 YSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELE 334
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
+ + Y L+ + L +++ +++ M +R + + ++ CR
Sbjct: 335 SAGYAENEMPYCMLM----DGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRS 390
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
+F+EA L D + N ++ C+ + + +M +M ++ V P +
Sbjct: 391 KRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTF 450
Query: 456 STLISGFAKEQ 466
LI F KE+
Sbjct: 451 HILIKYFIKEK 461
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 136/322 (42%), Gaps = 48/322 (14%)
Query: 269 HPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFP-DVYSYNMLLNAFCK-KGDVXX 326
H F ++ C+ G + +A E + + S + FP DV +N++LN +C DV
Sbjct: 220 HTPYDEAFQGLLCALCRHGHIEKAEEFM--LASKKLFPVDVEGFNVILNGWCNIWTDVTE 277
Query: 327 XXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICN 386
I P+ +Y+ +I C +K+ L+D SL +Y+ M + + P + N
Sbjct: 278 AKRIWREMGNYCITPNKDSYSHMIS-CFSKVG--NLFD-SLRLYDEMKKRGLAPGIEVYN 333
Query: 387 HILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKR 446
++ V RE F EA+ L++ +E+G+ + +YN +I +C+ +A ++ M+
Sbjct: 334 SLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISE 393
Query: 447 NVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHK 506
N+ P V + + E NFE KT L
Sbjct: 394 NLSPTVDTFHAFL-----EAVNFE------------------KTLEVL------------ 418
Query: 507 AYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLID 566
G+M S L P E ++ ++ ++ A ++ EM R + N Y I
Sbjct: 419 -----GQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQ 473
Query: 567 GFCKIDYIDLATQLFDEMKRKG 588
G +++ A +++ EMK KG
Sbjct: 474 GLLSCGWLEKAREIYSEMKSKG 495
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%)
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
+ EM C+ P++ SY+ +I+ F + + + L+ EM + G P + Y L+ +
Sbjct: 282 WREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSLVYVLTR 341
Query: 571 IDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
D D A +L ++ +G+ PD VTY +I
Sbjct: 342 EDCFDEAMKLMKKLNEEGLKPDSVTYNSMI 371
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 156/395 (39%), Gaps = 48/395 (12%)
Query: 235 NPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE 294
NPT+ T+ + ++ A ++R + + + +I + G V+ E
Sbjct: 464 NPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFE 523
Query: 295 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 354
V +M +S +++++ L++ + G V +KP V + +LI C
Sbjct: 524 VFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISAC- 582
Query: 355 NKLKGQQ-LYDKSLEVYNSMLQNA--IRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 411
GQ D++ +V M I P+ I +++ C GQ A + + H+
Sbjct: 583 ----GQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKY 638
Query: 412 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLI--SGFAKEQSNF 469
GI Y ++ K A + M +++V P V +S LI +G AK
Sbjct: 639 GIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAK----- 693
Query: 470 EMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTAL 529
M++ F GI + K+ R G +SY++L
Sbjct: 694 -MLDEAF------GILQDAKSQG----------------IRLGT----------ISYSSL 720
Query: 530 IAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 589
+ CN ++ A L++++ I P + T LI C+ + + A + DE+K G+
Sbjct: 721 MGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQLPKAMEYLDEIKTLGL 780
Query: 590 FPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 624
P+ +TY++L+ + KL + K + +
Sbjct: 781 KPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGV 815
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 137/379 (36%), Gaps = 47/379 (12%)
Query: 198 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
+ E+G + YT ++S G + E+ ++ SG + T+G I G G
Sbjct: 493 VQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQ 552
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSR--TFPDVYSY 311
V A L K + FNA+I Q GAV+ A +VL EMK+ PD S
Sbjct: 553 VAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISI 612
Query: 312 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYN 371
L+ A C G V I+ + YT + C +D + +Y
Sbjct: 613 GALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGD----WDFACSIYK 668
Query: 372 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 431
M + + P+ + + ++ V EA +L+D QGI L SY+ ++ C
Sbjct: 669 DMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAK 728
Query: 432 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
K ALEL ++ + P + + LI+ +
Sbjct: 729 DWKKALELYEKIKSIKLRPTISTMNALITALCE--------------------------- 761
Query: 492 TTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR 551
+ KA E+ L P+ ++Y+ L+ + V+ L +
Sbjct: 762 ---------GNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKG 812
Query: 552 IGCLPNLYTYTCLIDGFCK 570
G PNL C I CK
Sbjct: 813 DGVSPNLIMCRC-ITSLCK 830
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/387 (19%), Positives = 150/387 (38%), Gaps = 53/387 (13%)
Query: 139 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 198
++ LI A + ++ +VF N G+E
Sbjct: 504 LYTTLISSCAKSGKVDAMFEVFHQMSNSGVEA---------------------------- 535
Query: 199 METGPLPNIHTYTIMM-SCGDIRLAAEILGK--IYRSGG-NPTVVTYGTYIRGLCECGYV 254
N+HT+ ++ C A+ G I RS P V + I + G V
Sbjct: 536 -------NLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAV 588
Query: 255 DVAHKLVRKLHCKLHPLNSH--CFNAVIHGFCQRGAVNEALEVLEEMK--SSRTFPDVYS 310
D A ++ ++ + HP++ A++ C G V A EV + + R P+VY+
Sbjct: 589 DRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYT 648
Query: 311 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVY 370
+ +N+ K GD + P V +++LI + + ++ D++ +
Sbjct: 649 --IAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHA----KMLDEAFGIL 702
Query: 371 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 430
IR TI + ++ C +++AL L E + + N +I +C+
Sbjct: 703 QDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEG 762
Query: 431 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKT 490
+ A+E + + + P + YS L+ ++ + +FE+ +L ++ G++ N
Sbjct: 763 NQLPKAMEYLDEIKTLGLKPNTITYSMLMLA-SERKDDFEVSFKLLSQAKGDGVSPNLIM 821
Query: 491 YTTLISIHGRTRKRHKAYCRFGEMIQS 517
+ S+ ++R + C GE + S
Sbjct: 822 CRCITSL---CKRRFEKACAGGEPVVS 845
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 114/268 (42%), Gaps = 47/268 (17%)
Query: 361 QLYDKSLEVYNSMLQNAIRPNTIIC-NHILRVHCREGQFREALTLLEDFHEQGINLNQYS 419
Q ++ E++NS N P T N +LR +G+ ++ ++LLED ++ +
Sbjct: 385 QFPARNFELHNS---NGRSPETSDAYNRLLR----DGRIKDCISLLEDLDQRDLLDMDKI 437
Query: 420 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRL 479
Y+ CK+ + A++ R K + P + ++ L+S A Q + E + +
Sbjct: 438 YHASFFKACKK---QRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQ-DIEGARGVLRLV 493
Query: 480 VKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREM 539
++G+T + K YTTLIS SC +V A+F
Sbjct: 494 QESGMTADCKLYTTLIS--------------------SCAKSGKVD-----AMF------ 522
Query: 540 NVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 599
+F +MS G NL+T+ LIDG + + A + ++ K + PD V + L
Sbjct: 523 ----EVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNAL 578
Query: 600 IAWYHKHGRIGEKNKLFGEMKANCILLD 627
I+ + G + + EMKA +D
Sbjct: 579 ISACGQSGAVDRAFDVLAEMKAETHPID 606
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 11/275 (4%)
Query: 341 PSIVNYTSL-ILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTII--CNHILRVHCREGQ 397
P+++++ S+ ILLCK G Y+++LE + M + R + N +LR C E +
Sbjct: 134 PNLLSFKSMSILLCKIAKFGS--YEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTERE 191
Query: 398 FREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM-PRMLKRNVLPGVVNYS 456
+EA ++ E H + N + + N I+ + KE+ A EL M+KR P V Y
Sbjct: 192 MKEARSIFEKLHSR-FNPDVKTMN-ILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYG 249
Query: 457 TLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQ 516
I GF K++ NF RLF + + + TTLI G R + KA F E+ +
Sbjct: 250 IRIDGFCKKR-NFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISK 308
Query: 517 SCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDL 576
L PD +Y AL++ +++ A + +EM G P+ T+ + G K
Sbjct: 309 RGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGF 368
Query: 577 --ATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
+ + +MK + + P T +L+ + +G +
Sbjct: 369 NGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEV 403
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 114/296 (38%), Gaps = 43/296 (14%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
FN ++ FC + EA + E++ SR PDV + N+LL F + GDV
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKL-HSRFNPDVKTMNILLLGFKEAGDVT---------- 227
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
+L+ Y+ M++ +PN++ + C++
Sbjct: 228 -----------------------ATELF------YHEMVKRGFKPNSVTYGIRIDGFCKK 258
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
F EAL L ED ++ +IH A +L + KR + P Y
Sbjct: 259 RNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAY 318
Query: 456 STLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTL-ISIHGRTRKRHKAYCRF-GE 513
+ L+S K + ++ + + GI ++ T+ ++ I + C + +
Sbjct: 319 NALMSSLMK-CGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQK 377
Query: 514 MIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 569
M + L P + L+ +FC+ E+N+ L++ M G P+ + L C
Sbjct: 378 MKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALC 433
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 88/213 (41%), Gaps = 8/213 (3%)
Query: 205 PNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 260
P++ T I++ GD+ ++ + G P VTYG I G C+ A +L
Sbjct: 208 PDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRL 267
Query: 261 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 320
+ + +IHG +A ++ +E+ PD +YN L+++ K
Sbjct: 268 FEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMK 327
Query: 321 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIR 379
GDV I+P V + S+ + + K+K G ++ E Y M + ++
Sbjct: 328 CGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFG---FNGVCEYYQKMKERSLV 384
Query: 380 PNTIICNHILRVHCREGQFREALTLLEDFHEQG 412
P T ++++ C G+ L L + E+G
Sbjct: 385 PKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKG 417
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 103/255 (40%), Gaps = 31/255 (12%)
Query: 389 LRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK-----------ESYPKMAL 437
L + R F +A L+ + + NL S+ + ++CK E++ KM
Sbjct: 110 LHILARMRYFDQAWALMAEVRKDYPNL--LSFKSMSILLCKIAKFGSYEETLEAFVKMEK 167
Query: 438 ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFE---MVERLFTRLVKAGITFNTKTYTTL 494
E+ + GV ++ L+ F E+ E + E+L +R FN T
Sbjct: 168 EIFRKKF------GVDEFNILLRAFCTEREMKEARSIFEKLHSR-------FNPDVKTMN 214
Query: 495 ISIHGRTRKRHKAYCR--FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI 552
I + G + EM++ P+ V+Y I FC R A LF++M R+
Sbjct: 215 ILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRL 274
Query: 553 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 612
+ T LI G A QLFDE+ ++G+ PD Y L++ K G +
Sbjct: 275 DFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGA 334
Query: 613 NKLFGEMKANCILLD 627
K+ EM+ I D
Sbjct: 335 IKVMKEMEEKGIEPD 349
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 116/239 (48%), Gaps = 10/239 (4%)
Query: 357 LKGQQLYDKSLEVYNSMLQNAIRPN----TIICNHILRVHCREGQFREALTLLEDFHEQG 412
L ++L+ ++V M+ + P+ TI + +RVH R A+ L E+ G
Sbjct: 161 LGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVH----YVRRAIELFEESESFG 216
Query: 413 INLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV 472
+ + S+N ++ +C+ S+ A + K N+ +Y+ +ISG++K E +
Sbjct: 217 VKCSTESFNALLRCLCERSHVSAAKSVF-NAKKGNIPFDSCSYNIMISGWSK-LGEVEEM 274
Query: 473 ERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAV 532
E++ +V++G + +Y+ LI GRT + + + F + PD Y A+I
Sbjct: 275 EKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICN 334
Query: 533 FCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFP 591
F + R+ + + ++ M C PNL TY+ L+ G K + A ++F+EM +G+ P
Sbjct: 335 FISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLP 393
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/416 (21%), Positives = 162/416 (38%), Gaps = 65/416 (15%)
Query: 202 GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 257
G P++ TI M +R A E+ + G + ++ +R LCE +V A
Sbjct: 181 GVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAA 240
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
+ + P +S +N +I G+ + G V E +VL+EM S PD SY+ L+
Sbjct: 241 KSVFNAKKGNI-PFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEG 299
Query: 318 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 377
+ G + + S+E+++++
Sbjct: 300 LGRTGRI---------------------------------------NDSVEIFDNIKHKG 320
Query: 378 IRP-----NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
P N +ICN I R+ F E++ ++ N +Y++++ + K
Sbjct: 321 NVPDANVYNAMICNFI---SARD--FDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRK 375
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNF-----EMVERLFTRLVKAGITFN 487
ALE+ ML R VLP + L++ F K ++ MV ++ + KAG +
Sbjct: 376 VSDALEIFEEMLSRGVLP----TTGLVTSFLKPLCSYGPPHAAMV--IYQKSRKAGCRIS 429
Query: 488 TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQ 547
Y L+ R K + EM +S D Y ++ C I + A + +
Sbjct: 430 ESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVME 489
Query: 548 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWY 603
E R G PN + Y+ L + +LA +LF ++K+ + ++ W+
Sbjct: 490 EAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENARSFWRSNGWH 545
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 90/430 (20%), Positives = 169/430 (39%), Gaps = 55/430 (12%)
Query: 200 ETGPLPNIHTYTIMM-SCGDIRLAA---EILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 255
E G ++ +Y++++ + G +L + ++L + G NP + + YV
Sbjct: 144 EPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVR 203
Query: 256 VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLL 315
A +L + ++ FNA++ C+R V+ A V K + F D SYN+++
Sbjct: 204 RAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKKGNIPF-DSCSYNIMI 262
Query: 316 NAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQ 375
+ + K G+V P ++Y+ LI L + S+E+++++
Sbjct: 263 SGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLI----EGLGRTGRINDSVEIFDNIKH 318
Query: 376 NAIRP-----NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 430
P N +ICN I R+ F E++ ++ N +Y++++ + K
Sbjct: 319 KGNVPDANVYNAMICNFI---SARD--FDESMRYYRRMLDEECEPNLETYSKLVSGLIKG 373
Query: 431 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKT 490
ALE+ ML R VLP L T +K ++
Sbjct: 374 RKVSDALEIFEEMLSRGVLP---------------------TTGLVTSFLKPLCSYGPPH 412
Query: 491 YTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMS 550
+I +K KA CR E +Y L+ + + ++ EM
Sbjct: 413 AAMVI-----YQKSRKAGCRI----------SESAYKLLLKRLSRFGKCGMLLNVWDEMQ 457
Query: 551 RIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIG 610
G ++ Y ++DG C I +++ A + +E RKG P+ Y+ L + +
Sbjct: 458 ESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTE 517
Query: 611 EKNKLFGEMK 620
KLF ++K
Sbjct: 518 LAYKLFLKIK 527
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 131/335 (39%), Gaps = 58/335 (17%)
Query: 303 RTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQL 362
+T P++ ++NMLL+A CK G V +G+ L
Sbjct: 229 KTQPEINAFNMLLDALCKCGLVK--------------------------------EGEAL 256
Query: 363 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 422
+ +++ ++P+ N + CR ++A+ LLE+ E G ++Y
Sbjct: 257 LRR--------MRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCA 308
Query: 423 IIHMICKESYPKMALELMPRMLKRNVL---PGVVNYSTLISGFAKEQSNFEMVERLFTRL 479
I C+ A +L M+ + P ++ +I AK E E L R+
Sbjct: 309 AIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFE-LIGRM 367
Query: 480 VKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREM 539
+ G + TY +I K +AY EM PD V+Y + V C R+
Sbjct: 368 ISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKT 427
Query: 540 NVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 599
+ A L+ M C P++ TY LI F ++D D A + EM ++ DV TY +
Sbjct: 428 DEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAM 487
Query: 600 IAWYHKHGRIGEKNKLFG--EMKANCILLDDGIKK 632
I N LF K C LL++ + K
Sbjct: 488 I------------NGLFDCHRAKEACFLLEEVVNK 510
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 118/272 (43%), Gaps = 9/272 (3%)
Query: 228 KIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRG 287
K R P + + + LC+CG V L+R++ ++ P +++ FN + G+C+
Sbjct: 224 KRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKP-DANTFNVLFFGWCRVR 282
Query: 288 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX---XXXXXXCQIKPSIV 344
+A+++LEEM + P+ ++Y ++ FC+ G V P+
Sbjct: 283 DPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAK 342
Query: 345 NYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 404
+ +I+ K ++ + E+ M+ P+ ++ C + EA
Sbjct: 343 TFALMIVALAKNDKAEECF----ELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKF 398
Query: 405 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 464
L++ +G + +YN + ++C+ AL+L RM++ P V Y+ LIS F
Sbjct: 399 LDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFF- 457
Query: 465 EQSNFEMVERLFTRLVKAGITFNTKTYTTLIS 496
E + + +T + K + +TY +I+
Sbjct: 458 EMDDPDGAFNTWTEMDKRDCVQDVETYCAMIN 489
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 107/287 (37%), Gaps = 76/287 (26%)
Query: 409 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRML---KRN----VLPGVV-------- 453
H++ + +YNE+I ++ Y ++ ML KRN VL V+
Sbjct: 151 HQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYC 210
Query: 454 -NYSTLISGFAK----------EQSNFEMVERLFTR--LVKAG----------ITFNTKT 490
Y T + FAK E + F M+ + LVK G + + T
Sbjct: 211 ERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANT 270
Query: 491 YTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQ--- 547
+ L R R KA EMI++ P+ +Y A I FC ++ A LF
Sbjct: 271 FNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMI 330
Query: 548 -----------------------------------EMSRIGCLPNLYTYTCLIDGFCKID 572
M GCLP++ TY +I+G C +
Sbjct: 331 TKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAE 390
Query: 573 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
+D A + DEM KG PD+VTY + ++ + E KL+G M
Sbjct: 391 KVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRM 437
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 105/268 (39%), Gaps = 18/268 (6%)
Query: 205 PNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 260
P I+ + +++ CG ++ +L ++ R P T+ G C A KL
Sbjct: 232 PEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANTFNVLFFGWCRVRDPKKAMKL 290
Query: 261 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM---KSSRTFPDVYSYNMLLNA 317
+ ++ H + + A I FCQ G V+EA ++ + M S+ + P ++ +++ A
Sbjct: 291 LEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVA 350
Query: 318 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVY---NSML 374
K P + Y K+ ++G + +K E Y + M
Sbjct: 351 LAKNDKAEECFELIGRMISTGCLPDVSTY-------KDVIEGMCMAEKVDEAYKFLDEMS 403
Query: 375 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 434
P+ + N LRV C + EAL L E + +YN +I M + P
Sbjct: 404 NKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPD 463
Query: 435 MALELMPRMLKRNVLPGVVNYSTLISGF 462
A M KR+ + V Y +I+G
Sbjct: 464 GAFNTWTEMDKRDCVQDVETYCAMINGL 491
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/420 (21%), Positives = 178/420 (42%), Gaps = 29/420 (6%)
Query: 202 GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 257
G PN H +SC GDI+ A + + R N T TY ++ + E + A
Sbjct: 137 GLQPNAHACNSFLSCLLRNGDIQKAFTVF-EFMRKKENVTGHTYSLMLKAVAEVKGCESA 195
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIH----GFCQR-GAVNEALEVLEEMKSSRTFPDVYSYN 312
++ R+L + P CF+ V++ C R V E + MK +Y+
Sbjct: 196 LRMFREL--EREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYS 253
Query: 313 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNS 372
+L++ F + G +I ++I C + K +D +L+++ S
Sbjct: 254 LLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEK----WDLALKIFQS 309
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
ML+ ++PN + CN ++ + G+ + G ++Y++N ++ + K +
Sbjct: 310 MLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANR 369
Query: 433 PKMALELMPRMLKRNV--LPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKT 490
+ L+L + N+ L + + ++S ++ +E +L + +G+T +T +
Sbjct: 370 YEDVLQLFDMIRSENLCCLNEYLYNTAMVS--CQKLGYWEKAVKLLYEMEGSGLTVSTSS 427
Query: 491 YTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMS 550
Y +IS ++RK A + M Q P+ +Y +L+ C + +L+ E+
Sbjct: 428 YNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS-C------IWGSLWDEVE 480
Query: 551 RI--GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 608
I P++ Y I G C A +L+ +M+ G+ PD T +++ KH +
Sbjct: 481 DILKKVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNLKKHQK 540
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 124/260 (47%), Gaps = 7/260 (2%)
Query: 366 SLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIH 425
+LE+++SM ++PN CN L R G ++A T+ E F + N+ ++Y+ ++
Sbjct: 126 ALELFDSMRFLGLQPNAHACNSFLSCLLRNGDIQKAFTVFE-FMRKKENVTGHTYSLMLK 184
Query: 426 MICK----ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVK 481
+ + ES +M EL R KR VV Y+T IS + + +E ER++ +
Sbjct: 185 AVAEVKGCESALRMFREL-EREPKRRSCFDVVLYNTAISLCGRINNVYE-TERIWRVMKG 242
Query: 482 AGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNV 541
G TY+ L+SI R + A + EM+ + + E + A+I+ + ++
Sbjct: 243 DGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDL 302
Query: 542 ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 601
A +FQ M + G PNL LI+ K + L +++ +K G PD T+ L+
Sbjct: 303 ALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLT 362
Query: 602 WYHKHGRIGEKNKLFGEMKA 621
+K R + +LF +++
Sbjct: 363 ALYKANRYEDVLQLFDMIRS 382
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 140/357 (39%), Gaps = 56/357 (15%)
Query: 272 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 331
N+ + + C+R ++ A V E+M S + ++ FCK+G
Sbjct: 265 NAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVY 324
Query: 332 XXXXXCQ--IKPSIVNYTSLILLCKNK----LKGQQLYDKSLEVYNSMLQNAIRPNTIIC 385
+ + P V T + LCKN + L D S E + I+P + +
Sbjct: 325 ELAKTKEKSLPPRFV-ATLITALCKNDGTITFAQEMLGDLSGEAR----RRGIKPFSDVI 379
Query: 386 NHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLK 445
+ + CR ++A LL D +G +N ++H K A E++ M
Sbjct: 380 HSL----CRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMES 435
Query: 446 RNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRH 505
R + P V Y+ +ISG+AK E E I +K+H
Sbjct: 436 RGLKPDVYTYTVIISGYAKGGMMDEAQE-----------------------ILAEAKKKH 472
Query: 506 KAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLI 565
K L P V+Y ALI +C I E + A L EM R G PN Y LI
Sbjct: 473 KK-----------LSP--VTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLI 519
Query: 566 DGFC--KIDYIDLATQLFDEMKRKGIFPDVVTYTVL--IAWYHKHGRIGEKNKLFGE 618
FC +D+ + A LF+EMK+KG+ + ++ ++ + ++ E L E
Sbjct: 520 QSFCLKALDW-EKAEVLFEEMKQKGLHLNAISQGLIRAVKEMESEAKVTEDGNLLAE 575
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 102/221 (46%), Gaps = 7/221 (3%)
Query: 217 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 276
G I A E+LG + + + I LC V A L+ + K + F
Sbjct: 351 GTITFAQEMLGDLSGEARRRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVF 410
Query: 277 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 336
N V+H + G ++EA EVL+ M+S PDVY+Y ++++ + K G +
Sbjct: 411 NLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKK 470
Query: 337 CQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
K S V Y +LI CK + YD++L++ N M + ++PN N +++ C +
Sbjct: 471 KHKKLSPVTYHALIRGYCK-----IEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLK 525
Query: 396 G-QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 435
+ +A L E+ ++G++LN S I + ES K+
Sbjct: 526 ALDWEKAEVLFEEMKQKGLHLNAISQGLIRAVKEMESEAKV 566
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%), Gaps = 8/244 (3%)
Query: 381 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
N I N ++ + + G+ + A + E G N +Y + +CK S+ A +
Sbjct: 230 NLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVC 289
Query: 441 PRMLKRNVLPGVVNYSTLISGFAKE---QSNFEMVERLFTRLVKAGITFNTKTYTTLISI 497
+MLK VL +I+ F KE + + + E T+ F T L
Sbjct: 290 EKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKN 349
Query: 498 HGRTRKRHKAYCRF-GEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLP 556
G + GE + + P ++ +I C +R + A AL +M G P
Sbjct: 350 DGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAP 405
Query: 557 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 616
+ ++ K +D A ++ M+ +G+ PDV TYTV+I+ Y K G + E ++
Sbjct: 406 GNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEIL 465
Query: 617 GEMK 620
E K
Sbjct: 466 AEAK 469
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 10/132 (7%)
Query: 198 LMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++ GP P + +++ GD+ A E+L + G P V TY I G + G
Sbjct: 398 MISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGM 457
Query: 254 VDVAHKLV---RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 310
+D A +++ +K H KL P+ H A+I G+C+ +EAL++L EM P+
Sbjct: 458 MDEAQEILAEAKKKHKKLSPVTYH---ALIRGYCKIEEYDEALKLLNEMDRFGVQPNADE 514
Query: 311 YNMLLNAFCKKG 322
YN L+ +FC K
Sbjct: 515 YNKLIQSFCLKA 526
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 127/292 (43%), Gaps = 45/292 (15%)
Query: 337 CQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREG 396
C+IKP + +LL + +G +YDK++EVY M PNT N ++ V+ +
Sbjct: 104 CEIKPRV-----FLLLLEIFWRGH-IYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLN 157
Query: 397 QFREALTLLEDFHEQGINL-NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
AL + E GI N +S++ + C R L GV
Sbjct: 158 VVNGALEIFE-----GIRFRNFFSFDIALSHFCSRG-------------GRGDLVGV--- 196
Query: 456 STLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMI 515
+ + R++ G N + + ++ + RT +A+ G MI
Sbjct: 197 -----------------KIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMI 239
Query: 516 QSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 575
S + ++ L++ F E A LF +M +IGC PNL TYT LI GF + +D
Sbjct: 240 CSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVD 299
Query: 576 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
A + +++ +G+ PD+V ++I Y + GR E K+F ++ ++ D
Sbjct: 300 EAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPD 351
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 158/384 (41%), Gaps = 21/384 (5%)
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
V V L R + +P N F ++ C+ G V+EA +V+ M S V ++M
Sbjct: 194 VGVKIVLKRMIGEGFYP-NRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSM 252
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
L++ F + G+ P++V YTSLI + D++ V + +
Sbjct: 253 LVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLI----KGFVDLGMVDEAFTVLSKV 308
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
+ P+ ++CN ++ + R G+F EA + ++ + +QY++ I+ +C
Sbjct: 309 QSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSG-- 366
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISG------FAKEQSNFEMVERLFTRLVKAGITFN 487
+L+PR + G+ L++G F+K N ++ + + +
Sbjct: 367 --KFDLVPR-----ITHGIGTDFDLVTGNLLSNCFSKIGYN-SYALKVLSIMSYKDFALD 418
Query: 488 TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQ 547
TYT +S R A + +I+ D ++A+I + + N A LF+
Sbjct: 419 CYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFK 478
Query: 548 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 607
++ +YT I G + I+ A L +MK GI+P+ TY +I+ K
Sbjct: 479 RCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEK 538
Query: 608 RIGEKNKLFGEMKANCILLDDGIK 631
+ K+ E + LD K
Sbjct: 539 ETEKVRKILRECIQEGVELDPNTK 562
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 136/309 (44%), Gaps = 30/309 (9%)
Query: 201 TGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDV 256
+G +++ +++++S G+ + A ++ K+ + G +P +VTY + I+G + G VD
Sbjct: 241 SGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDE 300
Query: 257 AHKLVRKLHCK-LHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLL 315
A ++ K+ + L P C N +IH + + G EA +V ++ + PD Y++ +L
Sbjct: 301 AFTVLSKVQSEGLAPDIVLC-NLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASIL 359
Query: 316 NAFCKKGDVXXXXXXXXXXXXCQIKPSIVN--YTSLILLCKNKLK------GQQLYDKSL 367
++ C G + P I + T L+ N L G Y +L
Sbjct: 360 SSLCLSGKF-------------DLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSY--AL 404
Query: 368 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
+V + M + L CR G R A+ + + ++ +L+ + ++ II +
Sbjct: 405 KVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSL 464
Query: 428 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFN 487
+ A+ L R + VV+Y+ I G + + E L + + GI N
Sbjct: 465 IELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAK-RIEEAYSLCCDMKEGGIYPN 523
Query: 488 TKTYTTLIS 496
+TY T+IS
Sbjct: 524 RRTYRTIIS 532
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/377 (23%), Positives = 156/377 (41%), Gaps = 65/377 (17%)
Query: 253 YVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 312
+V A K VR L + + F V+ F + + + VL+E + R D +S+
Sbjct: 121 HVVAAIKTVRGLSQRRQGSDDMRF--VMSSFVAKLSFRDMCVVLKEQRGWRQVRDFFSWM 178
Query: 313 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDK-SLEVYN 371
L ++ +PS+V YT ++ +L GQ K + E +
Sbjct: 179 KLQLSY---------------------RPSVVVYTIVL-----RLYGQVGKIKMAEETFL 212
Query: 372 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 431
ML+ P+ + C +L + R G+ LT + E+ I L+ YN ++ + K+S
Sbjct: 213 EMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKS 272
Query: 432 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
+ ++L EMVE G+ N TY
Sbjct: 273 FHGKVIDLW----------------------------LEMVEE--------GVPPNEFTY 296
Query: 492 TTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR 551
T ++S + + + +A FGEM P+EV+Y+++I++ + A L+++M
Sbjct: 297 TLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRS 356
Query: 552 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
G +P+ YT ++ + K + A LF +M+R I D V ++I Y K G +
Sbjct: 357 QGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHD 416
Query: 612 KNKLFGEMKANCILLDD 628
+F E + +L D+
Sbjct: 417 AQSMFEETERLNLLADE 433
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/429 (18%), Positives = 172/429 (40%), Gaps = 47/429 (10%)
Query: 205 PNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 260
P++ YTI++ G I++A E ++ G P V GT + G
Sbjct: 186 PSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTF 245
Query: 261 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 320
+ + + L++ +N ++ ++ + +++ EM P+ ++Y ++++++ K
Sbjct: 246 YKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAK 305
Query: 321 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 380
+G P V Y+S+I L +K ++K++ +Y M I P
Sbjct: 306 QGFKEEALKAFGEMKSLGFVPEEVTYSSVISLS---VKAGD-WEKAIGLYEDMRSQGIVP 361
Query: 381 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
+ C +L ++ + + +AL+L D N+ +E+I + Y K+ L
Sbjct: 362 SNYTCATMLSLYYKTENYPKALSLFADMER-----NKIPADEVIRGLIIRIYGKLGL--- 413
Query: 441 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGR 500
F QS FE ERL + + KTY + +H
Sbjct: 414 ---------------------FHDAQSMFEETERL-------NLLADEKTYLAMSQVHLN 445
Query: 501 TRKRHKAYCRFGEMIQSCLCP-DEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLY 559
+ KA EM+++ P +Y ++ + I+ ++ A F+ +S+ G LP+
Sbjct: 446 SGNVVKALDVI-EMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTG-LPDAS 503
Query: 560 TYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
+ +++ + +++ + A ++ + D+ Y + Y K G + E L +M
Sbjct: 504 SCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKM 563
Query: 620 KANCILLDD 628
+ D+
Sbjct: 564 GREARVKDN 572
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 110/253 (43%), Gaps = 1/253 (0%)
Query: 380 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 439
P + + ++ G+ REA + E+ I L+ YN +I + + + A E+
Sbjct: 737 PGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEI 796
Query: 440 MPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHG 499
RM V + Y+T+IS + + + +E +F+ ++G+ + K YT +I +G
Sbjct: 797 YERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIE-IFSNARRSGLYLDEKIYTNMIMHYG 855
Query: 500 RTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLY 559
+ K +A F EM + + P SY ++ + R + L Q M R G +L
Sbjct: 856 KGGKMSEALSLFSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLS 915
Query: 560 TYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
TY LI + + A + +K KGI ++ L++ K G + E + + +M
Sbjct: 916 TYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKM 975
Query: 620 KANCILLDDGIKK 632
I D K+
Sbjct: 976 SEAGISPDSACKR 988
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 92/200 (46%), Gaps = 1/200 (0%)
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTT 493
KMA E ML+ P V T++ +A+ + M+ + + + I +T Y
Sbjct: 205 KMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLT-FYKAVQERRILLSTSVYNF 263
Query: 494 LISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIG 553
++S + K + EM++ + P+E +YT +++ + A F EM +G
Sbjct: 264 MLSSLQKKSFHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLG 323
Query: 554 CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKN 613
+P TY+ +I K + A L+++M+ +GI P T +++ Y+K +
Sbjct: 324 FVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKAL 383
Query: 614 KLFGEMKANCILLDDGIKKL 633
LF +M+ N I D+ I+ L
Sbjct: 384 SLFADMERNKIPADEVIRGL 403
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/345 (19%), Positives = 141/345 (40%), Gaps = 14/345 (4%)
Query: 228 KIYRSGG---NPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 284
++Y + G P + I CG+++ A+ L + K + + +++
Sbjct: 691 RLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALT 750
Query: 285 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 344
RG EA + D YN L+ A + G + + SI
Sbjct: 751 NRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQ 810
Query: 345 NYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 404
Y ++I + +G QL DK++E++++ ++ + + I +++ + + G+ EAL+L
Sbjct: 811 TYNTMISVYG---RGLQL-DKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSL 866
Query: 405 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 464
+ ++GI SYN ++ + EL+ M + + Y TLI +A
Sbjct: 867 FSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYA- 925
Query: 465 EQSNFEMVERLFTRLVKAGITFNTKTYTTLISI---HGRTRKRHKAYCRFGEMIQSCLCP 521
E S F E+ T + + GI + +++L+S G + + YC+ M ++ + P
Sbjct: 926 ESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCK---MSEAGISP 982
Query: 522 DEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLID 566
D ++ + + +++M R + + + + D
Sbjct: 983 DSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRFVSSVVED 1027
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 100/577 (17%), Positives = 217/577 (37%), Gaps = 66/577 (11%)
Query: 73 KFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDL 132
K G W + G + I+ + A M + Y K ++ + S D+
Sbjct: 340 KAGDWEKAIGLYEDMRSQGIVPSNYTCATM----------LSLYYKTENYPKALSLFADM 389
Query: 133 PHHSV----LVFNVLIKVFASNSMLEHAHQVFVSAKNVGL-----------ELHIRSCNF 177
+ + ++ ++I+++ + A +F + + L ++H+ S N
Sbjct: 390 ERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGN- 448
Query: 178 LLKCLXXXXXXXXXXXXXXXLMETGPLP-NIHTYTIMMSC----GDIRLAAEILGKIYRS 232
++K L +M+T +P + Y +M+ C ++ A E + ++
Sbjct: 449 VVKALDVIE-----------MMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKT 497
Query: 233 GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEA 292
G P + + + A ++++ + + + +C+ G V EA
Sbjct: 498 G-LPDASSCNDMLNLYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEA 556
Query: 293 LEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL 352
+++ +M D N F + + S ++ +L L+
Sbjct: 557 QDLIVKMGREARVKD--------NRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMALGLM 608
Query: 353 CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQG 412
+LK L +++ + N M + + + + N ++ REG +A + + G
Sbjct: 609 LNLRLKEGNL-NETKAILNLMFKTDLGSSAV--NRVISSFVREGDVSKAEMIADIIIRLG 665
Query: 413 INLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV 472
+ + + + +I + ++ K A L + PG ++I + + E
Sbjct: 666 LRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKT-PGKSVIRSMIDAYVR-CGWLEDA 723
Query: 473 ERLFTRLVKAGITFNTKTYTTLI-SIHGRTRKRHKAYCRFGEMIQSCLCP----DEVSYT 527
LF + G T + L+ ++ R + R + + ++CL D V Y
Sbjct: 724 YGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEH-----ISRTCLEKNIELDTVGYN 778
Query: 528 ALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK 587
LI ++ A +++ M G ++ TY +I + + +D A ++F +R
Sbjct: 779 TLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRS 838
Query: 588 GIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 624
G++ D YT +I Y K G++ E LF EM+ I
Sbjct: 839 GLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGI 875
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/389 (21%), Positives = 171/389 (43%), Gaps = 45/389 (11%)
Query: 247 GLCECGYVDVAH----------KLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL 296
GLC C YV +L +K + N+ +N+++HG+ + G ++EA V
Sbjct: 134 GLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVF 193
Query: 297 EEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL---LC 353
+++ D S+N++++++ KKGD+ C + ++++ L
Sbjct: 194 DKIPEK----DAVSWNLIISSYAKKGDMGNA---------CSL------FSAMPLKSPAS 234
Query: 354 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 413
N L G + + +++ + + N + ++ + + G + A L ++
Sbjct: 235 WNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKK-- 292
Query: 414 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRN--VLPGVVNYSTLISGFAKEQSNFEM 471
++ Y+ +I + PK AL+L +ML+RN + P + S+++S + + N
Sbjct: 293 --DKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANS-QLGNTSF 349
Query: 472 VERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIA 531
+ + + + GI + T+LI ++ + KA+ F + + D VSY+A+I
Sbjct: 350 GTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKK----DTVSYSAMI- 404
Query: 532 VFCNIREMNV-ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIF 590
+ C I M A +LF M PN+ T+T L+ + + + F+ MK +
Sbjct: 405 MGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLE 464
Query: 591 PDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
P Y +++ + GR+ E +L M
Sbjct: 465 PSADHYGIMVDMLGRAGRLEEAYELIKSM 493
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 104/255 (40%), Gaps = 32/255 (12%)
Query: 388 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 447
++R + +F+E + + D H GI + ++ ++ K + + LK N
Sbjct: 75 LVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALK-N 133
Query: 448 VLPGVVNYSTLISGFAKEQSNFEMVERLFTRLV-KAGITFNTKTYTTLISIHGRTRKRH- 505
L G V T + G E+ ++ F + K +++N+ + L S +R
Sbjct: 134 GLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSWNSLLHGYLESGELDEARRVF 193
Query: 506 ---------------KAYCRFGEMIQSCL------CPDEVSYTALIAVFCNIREMNVACA 544
+Y + G+M +C S+ LI + N REM +A
Sbjct: 194 DKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLART 253
Query: 545 LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYH 604
F M + N ++ +I G+ K+ + A +LF M +K D + Y +IA Y
Sbjct: 254 YFDAMPQ----KNGVSWITMISGYTKLGDVQSAEELFRLMSKK----DKLVYDAMIACYT 305
Query: 605 KHGRIGEKNKLFGEM 619
++G+ + KLF +M
Sbjct: 306 QNGKPKDALKLFAQM 320
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 154/376 (40%), Gaps = 14/376 (3%)
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF-PDVYSYN 312
V K V+ + C HCF + + + LEV M+ R + PD Y+
Sbjct: 85 VKTLDKYVKVVRC------DHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYS 137
Query: 313 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI---LLCKNKLKGQQLYDKSLEV 369
L++ KKG +P Y +LI L ++K K + L+
Sbjct: 138 KLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDK 197
Query: 370 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 429
+ + +PN + N +LR + G+ + L +D ++ + Y++N ++ K
Sbjct: 198 MKGIER--CQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 430 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTK 489
K ++ RM P ++ ++ LI + K+Q FE +E+ F L+++
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQE-FEKMEQTFKSLMRSKEKPTLP 314
Query: 490 TYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM 549
T+ ++I +G+ R KA F +M P ++Y +I ++ ++ A +F+E+
Sbjct: 315 TFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEV 374
Query: 550 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
+ T +++ +C+ A +LF + PD TY L Y K
Sbjct: 375 GESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMK 434
Query: 610 GEKNKLFGEMKANCIL 625
+ L +M+ + I+
Sbjct: 435 EQVQILMKKMEKDGIV 450
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 112/265 (42%), Gaps = 5/265 (1%)
Query: 235 NPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE 294
P VVTY +R + G VD + L + L + + FN V+ + + G + E
Sbjct: 205 QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEA 264
Query: 295 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 354
VL M+S+ PD+ ++N+L++++ KK + + KP++ + S+I+
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMII--- 321
Query: 355 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 414
N K + + DK+ V+ M P+ I ++ ++ G A + E+ E
Sbjct: 322 NYGKARMI-DKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRV 380
Query: 415 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVER 474
L + N ++ + C+ A +L V P Y L + K E V+
Sbjct: 381 LKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMK-EQVQI 439
Query: 475 LFTRLVKAGITFNTKTYTTLISIHG 499
L ++ K GI N + + + + G
Sbjct: 440 LMKKMEKDGIVPNKRFFLEALEVFG 464
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 154/376 (40%), Gaps = 14/376 (3%)
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF-PDVYSYN 312
V K V+ + C HCF + + + LEV M+ R + PD Y+
Sbjct: 85 VKTLDKYVKVVRC------DHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYS 137
Query: 313 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI---LLCKNKLKGQQLYDKSLEV 369
L++ KKG +P Y +LI L ++K K + L+
Sbjct: 138 KLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDK 197
Query: 370 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 429
+ + +PN + N +LR + G+ + L +D ++ + Y++N ++ K
Sbjct: 198 MKGIER--CQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 430 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTK 489
K ++ RM P ++ ++ LI + K+Q FE +E+ F L+++
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQE-FEKMEQTFKSLMRSKEKPTLP 314
Query: 490 TYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM 549
T+ ++I +G+ R KA F +M P ++Y +I ++ ++ A +F+E+
Sbjct: 315 TFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEV 374
Query: 550 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
+ T +++ +C+ A +LF + PD TY L Y K
Sbjct: 375 GESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMK 434
Query: 610 GEKNKLFGEMKANCIL 625
+ L +M+ + I+
Sbjct: 435 EQVQILMKKMEKDGIV 450
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 112/264 (42%), Gaps = 5/264 (1%)
Query: 236 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 295
P VVTY +R + G VD + L + L + + FN V+ + + G + E V
Sbjct: 206 PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAV 265
Query: 296 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 355
L M+S+ PD+ ++N+L++++ KK + + KP++ + S+I+ N
Sbjct: 266 LTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMII---N 322
Query: 356 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 415
K + + DK+ V+ M P+ I ++ ++ G A + E+ E L
Sbjct: 323 YGKARMI-DKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVL 381
Query: 416 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 475
+ N ++ + C+ A +L V P Y L + K E V+ L
Sbjct: 382 KASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMK-EQVQIL 440
Query: 476 FTRLVKAGITFNTKTYTTLISIHG 499
++ K GI N + + + + G
Sbjct: 441 MKKMEKDGIVPNKRFFLEALEVFG 464
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 113/260 (43%), Gaps = 10/260 (3%)
Query: 381 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
NT I N ILR + G + + + +G+ + +SY+ + ++CK P A++L
Sbjct: 188 NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLY 247
Query: 441 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGR 500
M R + VV Y+T+I Q E R+F + + G N T+ T+I +
Sbjct: 248 KEMKSRRMKLDVVAYNTVIRAIGASQG-VEFGIRVFREMRERGCEPNVATHNTIIKLLCE 306
Query: 501 TRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYT 560
+ AY EM + PD ++Y L F + + + +LF M R G P + T
Sbjct: 307 DGRMRDAYRMLDEMPKRGCQPDSITYMCL---FSRLEKPSEILSLFGRMIRSGVRPKMDT 363
Query: 561 YTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
Y L+ F + ++ ++ MK G PD Y +I + G + + EM
Sbjct: 364 YVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEM- 422
Query: 621 ANCILLDDGIKKLQDPKLVQ 640
++ G+ + P+LV+
Sbjct: 423 -----IERGLSPRRRPELVE 437
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 110/251 (43%), Gaps = 10/251 (3%)
Query: 272 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 331
N+ N ++ G+ + G + E ++M + D++SY++ ++ CK G
Sbjct: 188 NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLY 247
Query: 332 XXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRV 391
++K +V Y ++I + Q + + V+ M + PN N I+++
Sbjct: 248 KEMKSRRMKLDVVAYNTVI----RAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKL 303
Query: 392 HCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPG 451
C +G+ R+A +L++ ++G + +Y + + + P L L RM++ V P
Sbjct: 304 LCEDGRMRDAYRMLDEMPKRGCQPDSITY---MCLFSRLEKPSEILSLFGRMIRSGVRPK 360
Query: 452 VVNYSTLISGFAKEQSNF-EMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCR 510
+ Y L+ F E+ F + V ++ + ++G T ++ Y +I + A
Sbjct: 361 MDTYVMLMRKF--ERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREY 418
Query: 511 FGEMIQSCLCP 521
EMI+ L P
Sbjct: 419 EEEMIERGLSP 429
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/398 (18%), Positives = 153/398 (38%), Gaps = 36/398 (9%)
Query: 63 SLNWKIAREKKFGSWVETH-GFSHSVNYFRIIIHTFAMAGMHLEV---FALLRDIVGYCK 118
S +W+ A E F +WVE GF H+ F +I G + E +AL+ ++G +
Sbjct: 58 SNDWQKALE--FFNWVERESGFRHTTETFNRVIDIL---GKYFEFEISWALINRMIGNTE 112
Query: 119 CDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFL 178
+P+H + F ++ K + + +++ A + + L N +
Sbjct: 113 S------------VPNH--VTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLV 158
Query: 179 LK-CLXXXXXXXXXXXXXXXLMETG-PLPNIHTYTIMM----SCGDIRLAAEILGKIYRS 232
C ++ G + N + +++ G E K+
Sbjct: 159 DALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTE 218
Query: 233 GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEA 292
G + +Y Y+ +C+ G A KL +++ + L+ +N VI V
Sbjct: 219 GVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFG 278
Query: 293 LEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL 352
+ V EM+ P+V ++N ++ C+ G + +P + Y L
Sbjct: 279 IRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLF-- 336
Query: 353 CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQG 412
++L+ + L ++ M+++ +RP ++R R G + L + + E G
Sbjct: 337 --SRLEKPS---EILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESG 391
Query: 413 INLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 450
+ +YN +I + ++ MA E M++R + P
Sbjct: 392 DTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 111/258 (43%), Gaps = 2/258 (0%)
Query: 364 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 423
+KS ++++ ML+ I+P+ I+ + G + A+ E G + + +
Sbjct: 192 EKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAM 251
Query: 424 IHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAG 483
I + MAL L R V +STLI + N++ ++ + G
Sbjct: 252 IDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGV-SGNYDGCLNIYEEMKALG 310
Query: 484 ITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVAC 543
+ N Y LI GR ++ +A + ++I + P+ +Y AL+ + R + A
Sbjct: 311 VKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDAL 370
Query: 544 ALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR-KGIFPDVVTYTVLIAW 602
A+++EM G + Y L+ Y+D A ++F +MK + PD T++ LI
Sbjct: 371 AIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITV 430
Query: 603 YHKHGRIGEKNKLFGEMK 620
Y GR+ E +M+
Sbjct: 431 YACSGRVSEAEAALLQMR 448
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 118/261 (45%), Gaps = 5/261 (1%)
Query: 369 VYNSMLQNAIRPN--TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHM 426
V N++L+ ++P+ I+ N ++V + ++ L ++ E+GI + ++ II
Sbjct: 161 VLNNLLET-MKPSREVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISC 219
Query: 427 ICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITF 486
+ PK A+E +M P V + +I + + N +M L+ R
Sbjct: 220 ARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGR-AGNVDMALSLYDRARTEKWRI 278
Query: 487 NTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALF 546
+ T++TLI I+G + + EM + P+ V Y LI + A ++
Sbjct: 279 DAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIY 338
Query: 547 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 606
+++ G PN TY L+ + + Y D A ++ EMK KG+ V+ Y L++ +
Sbjct: 339 KDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADN 398
Query: 607 GRIGEKNKLFGEMKANCILLD 627
+ E ++F +MK NC D
Sbjct: 399 RYVDEAFEIFQDMK-NCETCD 418
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 131/327 (40%), Gaps = 44/327 (13%)
Query: 268 LHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXX 327
+ P N+ F +I Q G A+E E+M S PD + +++A+ + G+V
Sbjct: 206 IKPDNA-TFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNV--- 261
Query: 328 XXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNH 387
D +L +Y+ R + + +
Sbjct: 262 ------------------------------------DMALSLYDRARTEKWRIDAVTFST 285
Query: 388 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 447
++R++ G + L + E+ G+ N YN +I + + P A + ++
Sbjct: 286 LIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNG 345
Query: 448 VLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKA 507
P Y+ L+ + + + + + ++ + + G++ Y TL+S+ R +A
Sbjct: 346 FTPNWSTYAALVRAYGRARYGDDALA-IYREMKEKGLSLTVILYNTLLSMCADNRYVDEA 404
Query: 508 YCRFGEMIQSCLC-PDEVSYTALIAVF-CNIREMNVACALFQEMSRIGCLPNLYTYTCLI 565
+ F +M C PD ++++LI V+ C+ R AL Q M G P L+ T +I
Sbjct: 405 FEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQ-MREAGFEPTLFVLTSVI 463
Query: 566 DGFCKIDYIDLATQLFDEMKRKGIFPD 592
+ K +D + FD++ GI PD
Sbjct: 464 QCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/396 (19%), Positives = 148/396 (37%), Gaps = 80/396 (20%)
Query: 133 PHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXX 192
P V+++NV +KVF + LE + ++F
Sbjct: 171 PSREVILYNVTMKVFRKSKDLEKSEKLF-------------------------------- 198
Query: 193 XXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGL 248
++E G P+ T+T ++SC G + A E K+ G P VT I
Sbjct: 199 ---DEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAY 255
Query: 249 CECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDV 308
G VD+A L + + +++ F+ +I + G + L + EEMK+ P++
Sbjct: 256 GRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNL 315
Query: 309 YSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLE 368
YN L+++ + ++ + +
Sbjct: 316 VIYNRLIDSMG--------------------------------------RAKRPWQAKI- 336
Query: 369 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 428
+Y ++ N PN ++R + R +AL + + E+G++L YN ++ M
Sbjct: 337 IYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCA 396
Query: 429 KESYPKMALELMPRMLK-RNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFN 487
Y A E+ M P +S+LI+ +A E E ++ +AG
Sbjct: 397 DNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSE-AEAALLQMREAGFEPT 455
Query: 488 TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDE 523
T++I +G+ ++ F ++++ + PD+
Sbjct: 456 LFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDD 491
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/417 (20%), Positives = 170/417 (40%), Gaps = 39/417 (9%)
Query: 200 ETGPLPNIHTYT----IMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 255
E G +PNI TY I M G+ A IL G P +TY T
Sbjct: 212 EEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYST------------ 259
Query: 256 VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE-EMKSSRTFPDVYSYNML 314
A + R++ + L F + + +R N+ E E F Y ++
Sbjct: 260 -ALLVYRRMEDGMGAL--EFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVM 316
Query: 315 LNAFCKKGD-VXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNK---LKGQQLYDKSLEVY 370
K + ++PS + LI C + + G++LY + E +
Sbjct: 317 RRWLVKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERF 376
Query: 371 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSY-------NEI 423
+ + + +CNH++ + + ++ AL + ED ++G N SY N +
Sbjct: 377 SEI-------SLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNIL 429
Query: 424 IHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAG 483
+ K + + L+ +M + + P +++ ++ +K ++ +F +V G
Sbjct: 430 LSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQ-IFKAMVDNG 488
Query: 484 ITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVAC 543
+Y L+S + + +A+ + MI+ + P+ +YT + +V ++ N+
Sbjct: 489 EKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLD 548
Query: 544 ALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
L +EM+ G P++ T+ +I G + +A + F MK + + P+ +TY +LI
Sbjct: 549 TLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEMLI 605
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/394 (18%), Positives = 150/394 (38%), Gaps = 59/394 (14%)
Query: 290 NEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSL 349
EA ++L++M+ P++ +YN L+ + ++G+ +P+ + Y++
Sbjct: 201 GEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTA 260
Query: 350 ILL---------------------CKNKLKGQQLYD------------------------ 364
+L+ K ++ YD
Sbjct: 261 LLVYRRMEDGMGALEFFVELREKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWL 320
Query: 365 --------KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLN 416
+ L++ N+M +RP+ ++ RE + L + E+ ++
Sbjct: 321 VKDDNWTTRVLKLLNAMDSAGVRPSREEHERLIWACTREEHYIVGKELYKRIRERFSEIS 380
Query: 417 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF------AKEQSNFE 470
N +I ++ K ALE+ +L P ++Y ++S F A ++ +
Sbjct: 381 LSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWR 440
Query: 471 MVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALI 530
RL ++ G+ + + ++ + + A F M+ + P +SY AL+
Sbjct: 441 WGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALL 500
Query: 531 AVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIF 590
+ + + A ++ M ++G PNLY YT + +L L EM KGI
Sbjct: 501 SALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDTLLKEMASKGIE 560
Query: 591 PDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 624
P VVT+ +I+ ++G G + F MK+ +
Sbjct: 561 PSVVTFNAVISGCARNGLSGVAYEWFHRMKSENV 594
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 97/223 (43%), Gaps = 6/223 (2%)
Query: 273 SHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXX 332
SH FN ++ +RG + +L +M+ P +N +L A K +
Sbjct: 424 SH-FNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFK 482
Query: 333 XXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVH 392
KP++++Y +L+ + L+ +LYD++ V+N M++ I PN + V
Sbjct: 483 AMVDNGEKPTVISYGALL----SALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVL 538
Query: 393 CREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGV 452
+ +F TLL++ +GI + ++N +I + +A E RM NV P
Sbjct: 539 TGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNE 598
Query: 453 VNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
+ Y LI A + + + L + G+ ++K Y ++
Sbjct: 599 ITYEMLIEALAND-AKPRLAYELHVKAQNEGLKLSSKPYDAVV 640
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 169/410 (41%), Gaps = 27/410 (6%)
Query: 222 AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIH 281
A ++ K+ + G + TY I GL G + L L K +++ F+ V
Sbjct: 378 ACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGL 437
Query: 282 GFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKP 341
C+ G + A++++EEM++ D+ + + LL F K+G + P
Sbjct: 438 QLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVP 497
Query: 342 SIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE--GQFR 399
+++ + + + + LK Q DK Y M P+ I+ + E G
Sbjct: 498 NVLRWNAGV---EASLKRPQSKDKD---YTPMF-----PSKGSFLDIMSMVGSEDDGASA 546
Query: 400 EALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN---YS 456
E ++ +ED + +S + + + + L + R + P + +
Sbjct: 547 EEVSPMED--------DPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMN 598
Query: 457 TLISGFAKEQSNFEMVERLFTRLVKAGIT-FNTKTYTTLISIHGRTRKRHKAYCRFGEMI 515
T +S + + + + +LF G+T + TY +++S + A +M
Sbjct: 599 TFLSIYL-SKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMF 657
Query: 516 QSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 575
++ D +Y +I + ++A A+ +++ G ++ Y LI+ K +D
Sbjct: 658 ENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLD 717
Query: 576 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM-KANCI 624
ATQLFD MK GI PDVV+Y +I K G++ E K M A C+
Sbjct: 718 EATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCL 767
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 146/353 (41%), Gaps = 31/353 (8%)
Query: 238 VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 297
+T+ LC G ++ A KLV ++ + ++ ++++ GF ++G + ++++
Sbjct: 429 AITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMK 488
Query: 298 EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKL 357
++ P+V +N + A K+ K S ++ S++ +
Sbjct: 489 HIREGNLVPNVLRWNAGVEASLKR----PQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGA 544
Query: 358 KGQQLYDKSLEVYNS---MLQNA-------------------IRPNTI---ICNHILRVH 392
+++ + ++S M Q A +P++ + N L ++
Sbjct: 545 SAEEVSPMEDDPWSSSPYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIY 604
Query: 393 CREGQFREALTLLEDFHEQGI-NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPG 451
+G A L E F+ G+ +L Y+YN ++ K+ Y + A ++ +M +
Sbjct: 605 LSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAAD 664
Query: 452 VVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRF 511
+ Y+ +I G K ++ + RL K G + Y TLI+ G+ + +A F
Sbjct: 665 IATYNVIIQGLGK-MGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLF 723
Query: 512 GEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCL 564
M + + PD VSY +I V ++ A + M GCLPN T T L
Sbjct: 724 DHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 163/402 (40%), Gaps = 35/402 (8%)
Query: 254 VDVAHKLVRKLHC-KLHPLNSH---CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 309
+D + KL C L P H ++ + C+ G + E ++L MK D
Sbjct: 69 IDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQT 128
Query: 310 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQ--IKPSIVNYTSLILLCKNKLK-GQQLYDKS 366
+LL++ + G + PS+ + + L+ K++L+ + K
Sbjct: 129 MAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKL 188
Query: 367 LEVYNSMLQN--------AIRPNTIICNHIL----RVHCREGQFREALTLLEDFHEQGIN 414
LE ++ + + P T+ N +L R R +F+ L+
Sbjct: 189 LEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRS-EFKRVFEKLKGMKR--FK 245
Query: 415 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL------PGVVNYSTLISG---FAKE 465
+ +SYN IH AL L M +R+ + P + Y++LI F K
Sbjct: 246 FDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKA 305
Query: 466 QSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVS 525
+ ++ L +G + TY LI ++ + A +GEM + PD +
Sbjct: 306 KDAL----IVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIV 361
Query: 526 YTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 585
Y L+ R++ AC LF++M + G + +TY LIDG + + LF ++K
Sbjct: 362 YNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLK 421
Query: 586 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
+KG F D +T++++ + G++ KL EM+ +D
Sbjct: 422 KKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVD 463
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 93/484 (19%), Positives = 179/484 (36%), Gaps = 59/484 (12%)
Query: 135 HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXX 194
HS ++ + + +L + S K G+ L LL L
Sbjct: 90 HSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGV 149
Query: 195 XXXLMETGPLPNIHTYT----IMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE 250
+ E G N Y ++ ++RLA IL K+ + N + G I
Sbjct: 150 LDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYL 209
Query: 251 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFP-DVY 309
G V V N ++ G + +E V E++K + F D +
Sbjct: 210 PGTVAV--------------------NELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTW 249
Query: 310 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEV 369
SYN+ ++ F GD+ +L L K ++
Sbjct: 250 SYNICIHGFGCWGDLD---------------------AALSLF------------KEMKE 276
Query: 370 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 429
+S+ ++ P+ N ++ V C G+ ++AL + ++ G + +Y +I CK
Sbjct: 277 RSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCK 336
Query: 430 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTK 489
A+ + M +P + Y+ L+ G K + E + LF ++V+ G+ +
Sbjct: 337 SYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQ-LFEKMVQEGVRASCW 395
Query: 490 TYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM 549
TY LI R + + F ++ + D ++++ + C ++ A L +EM
Sbjct: 396 TYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEM 455
Query: 550 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
G +L T + L+ GF K D +L ++ + P+V+ + + K +
Sbjct: 456 ETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQS 515
Query: 610 GEKN 613
+K+
Sbjct: 516 KDKD 519
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 4/119 (3%)
Query: 208 HTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRK 263
+TY MMS G + A +L +++ + + TY I+GL + G D+A ++ +
Sbjct: 631 YTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDR 690
Query: 264 LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKG 322
L + L+ +N +I+ + ++EA ++ + MKS+ PDV SYN ++ K G
Sbjct: 691 LTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAG 749
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 126/284 (44%), Gaps = 40/284 (14%)
Query: 382 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIH---------------- 425
TI+C+ + + G+ EAL +LE+ ++GI + Y+ +I
Sbjct: 252 TIVCSSL----AKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFK 307
Query: 426 -------------------MICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ 466
M +E + LE++ M K + +++GF+K++
Sbjct: 308 EAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQR 367
Query: 467 SNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSY 526
E V +++ +K TY I+ + R K +KA F EM++ V+Y
Sbjct: 368 GFAEAV-KVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAY 426
Query: 527 TALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 586
+ ++ ++ R ++ A L +M + GC PN++ Y LID + + A +++ EMKR
Sbjct: 427 SNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKR 486
Query: 587 KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 630
+ PD V+YT +I+ Y++ + +L+ E + N +D +
Sbjct: 487 AKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAM 530
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/439 (19%), Positives = 192/439 (43%), Gaps = 67/439 (15%)
Query: 208 HTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCK 267
H T + GD+R A E+ ++ VVT+ + G + +A L +++ +
Sbjct: 82 HVITGYIKLGDMREARELFDRV---DSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER 138
Query: 268 LHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXX 327
N +N +I G+ Q G +++ALE+ +EM ++ S+N ++ A ++G +
Sbjct: 139 ----NVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEA 190
Query: 328 XXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNH 387
+ +V++T+++ + L D++ +++ M + N I N
Sbjct: 191 MNLFERMP----RRDVVSWTAMV----DGLAKNGKVDEARRLFDCMPER----NIISWNA 238
Query: 388 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 447
++ + + + EA L + E+ S+N +I + A L RM ++N
Sbjct: 239 MITGYAQNNRIDEADQLFQVMPERDF----ASWNTMITGFIRNREMNKACGLFDRMPEKN 294
Query: 448 VLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAG-ITFNTKTYTTLIS--------IH 498
V ++++T+I+G+ + + N E + +F+++++ G + N TY +++S +
Sbjct: 295 V----ISWTTMITGYVENKENEEALN-VFSKMLRDGSVKPNVGTYVSILSACSDLAGLVE 349
Query: 499 GR------TRKRHKA-----------YCRFGEMIQS-------CLCP-DEVSYTALIAVF 533
G+ ++ H+ Y + GE+I + +C D +S+ ++IAV+
Sbjct: 350 GQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVY 409
Query: 534 CNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFP-D 592
+ A ++ +M + G P+ TY L+ ++ + F ++ R P
Sbjct: 410 AHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLR 469
Query: 593 VVTYTVLIAWYHKHGRIGE 611
YT L+ + GR+ +
Sbjct: 470 EEHYTCLVDLCGRAGRLKD 488
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/374 (21%), Positives = 152/374 (40%), Gaps = 72/374 (19%)
Query: 229 IYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGA 288
IY S P V I LC+ G + A RKL L + + VI G+ + G
Sbjct: 37 IYSSSSRPRVPQPEWLIGELCKVGKIAEA----RKLFDGLPERDVVTWTHVITGYIKLGD 92
Query: 289 VNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTS 348
+ EA E+ + + S + ++V +T+
Sbjct: 93 MREARELFDRVDS--------------------------------------RKNVVTWTA 114
Query: 349 LILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 408
++ L K L + + Q N + N ++ + + G+ +AL L ++
Sbjct: 115 MV--------SGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM 166
Query: 409 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN 468
E+ I S+N ++ + + A+ L RM +R+ VV+++ ++ G AK
Sbjct: 167 PERNI----VSWNSMVKALVQRGRIDEAMNLFERMPRRD----VVSWTAMVDGLAK-NGK 217
Query: 469 FEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTA 528
+ RLF + + I ++ +I+ + + + +A F M + D S+
Sbjct: 218 VDEARRLFDCMPERNII----SWNAMITGYAQNNRIDEADQLFQVMPER----DFASWNT 269
Query: 529 LIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKG 588
+I F REMN AC LF M N+ ++T +I G+ + + A +F +M R G
Sbjct: 270 MITGFIRNREMNKACGLFDRMPE----KNVISWTTMITGYVENKENEEALNVFSKMLRDG 325
Query: 589 -IFPDVVTYTVLIA 601
+ P+V TY +++
Sbjct: 326 SVKPNVGTYVSILS 339
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 95/203 (46%), Gaps = 20/203 (9%)
Query: 423 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKA 482
+I +CK A +L + +R+V V ++ +I+G+ K E E LF R+
Sbjct: 52 LIGELCKVGKIAEARKLFDGLPERDV----VTWTHVITGYIKLGDMREARE-LFDRVDSR 106
Query: 483 GITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVA 542
N T+T ++S + R+++ A F EM + + VS+ +I + ++ A
Sbjct: 107 K---NVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNV----VSWNTMIDGYAQSGRIDKA 159
Query: 543 CALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAW 602
LF EM N+ ++ ++ + ID A LF+ M R+ DVV++T ++
Sbjct: 160 LELFDEMPE----RNIVSWNSMVKALVQRGRIDEAMNLFERMPRR----DVVSWTAMVDG 211
Query: 603 YHKHGRIGEKNKLFGEMKANCIL 625
K+G++ E +LF M I+
Sbjct: 212 LAKNGKVDEARRLFDCMPERNII 234
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/449 (20%), Positives = 181/449 (40%), Gaps = 44/449 (9%)
Query: 205 PNIHTYTIMMS-CGD---IRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 260
P ++ +T ++ CGD +R+ EI G + +SG + + +C V+ A
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEA--- 189
Query: 261 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 320
RK+ ++ + +N ++ G+ Q G ALE+++ M P + +L A
Sbjct: 190 -RKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSA 248
Query: 321 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL---CKNKLKGQQLYDKSLE--------- 368
+ + T+L+ + C + +QL+D LE
Sbjct: 249 LRLISVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSM 308
Query: 369 ---------------VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 413
++ ML ++P + L G + + E G+
Sbjct: 309 IDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGL 368
Query: 414 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 473
+ N N +I M CK A + ++ R + V+++ +I GFA+ + +
Sbjct: 369 DRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTL----VSWNAMILGFAQNGRPIDALN 424
Query: 474 RLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVF 533
F+++ + +T TY ++I+ H A G +++SCL + TAL+ ++
Sbjct: 425 -YFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMY 483
Query: 534 CNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 593
+ +A +F MS ++ T+ +IDG+ + A +LF+EM++ I P+
Sbjct: 484 AKCGAIMIARLIFDMMSE----RHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNG 539
Query: 594 VTYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
VT+ +I+ G + K F MK N
Sbjct: 540 VTFLSVISACSHSGLVEAGLKCFYMMKEN 568
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/419 (16%), Positives = 173/419 (41%), Gaps = 27/419 (6%)
Query: 212 IMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPL 271
++ C ++ +IL ++++G + C G VD A ++ + KL+ L
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102
Query: 272 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 331
++ ++ GF + +++AL+ M+ P VY++ LL + ++
Sbjct: 103 ----YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIH 158
Query: 332 XXXXXCQIKPSIVNYTSLILL---CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHI 388
+ T L + C+ + ++++D+ E ++ + NTI+
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPE------RDLVSWNTIVAG-- 210
Query: 389 LRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV 448
+ + G R AL +++ E+ + + + ++ + + E+ + R+
Sbjct: 211 ---YSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAM-RSG 266
Query: 449 LPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAY 508
+VN ST + + + E +LF +++ N ++ ++I + + +A
Sbjct: 267 FDSLVNISTALVDMYAKCGSLETARQLFDGMLER----NVVSWNSMIDAYVQNENPKEAM 322
Query: 509 CRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGF 568
F +M+ + P +VS + ++ ++ + + +G N+ LI +
Sbjct: 323 LIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMY 382
Query: 569 CKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
CK +D A +F +++ + + V++ +I + ++GR + F +M++ + D
Sbjct: 383 CKCKEVDTAASMFGKLQSRTL----VSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPD 437
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/351 (21%), Positives = 142/351 (40%), Gaps = 42/351 (11%)
Query: 252 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF-PDVYS 310
G A KL L L+ F+ V+ + + G++ EA VLE M + PDVY
Sbjct: 572 GEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYL 631
Query: 311 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVY 370
+ +L + K C ++ DK +Y
Sbjct: 632 FRDMLRIYQK----------------CDLQ-----------------------DKLQHLY 652
Query: 371 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 430
+ ++ I N + N ++ R E E+ G N ++N ++ + K
Sbjct: 653 YRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKA 712
Query: 431 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKT 490
K EL + KR+ + V++Y+T+I+ + K + ++ + + G + + +
Sbjct: 713 KLFKKVNELFL-LAKRHGVVDVISYNTIIAAYGKNK-DYTNMSSAIKNMQFDGFSVSLEA 770
Query: 491 YTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMS 550
Y TL+ +G+ ++ K M +S PD +Y +I ++ ++ + +E+
Sbjct: 771 YNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELK 830
Query: 551 RIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 601
G P+L +Y LI + ++ A L EM+ + I PD VTYT L+
Sbjct: 831 ESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVT 881
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 100/533 (18%), Positives = 216/533 (40%), Gaps = 49/533 (9%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 195
+++ +N LI + +E A +F N+GLE S +++
Sbjct: 348 NIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYY 407
Query: 196 XXLMETGPLPN-IHTYTIM---MSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 251
L G PN + +T++ GD A + + + G + + G ++ +
Sbjct: 408 QELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSIL-GIILQAYEKV 466
Query: 252 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 311
G +DV +++ LN F++++ + + G V++ L +L E K + + + Y
Sbjct: 467 GKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLY 526
Query: 312 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYN 371
++L+ + + G + + ++ +++I + + G+ + ++ ++Y
Sbjct: 527 HLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYT--VMGE--FSEAEKLYL 582
Query: 372 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ-------------------- 411
++ + + + I + ++R++ + G EA ++LE EQ
Sbjct: 583 NLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKC 642
Query: 412 ----------------GINLNQYSYNEIIHMICKESYPKMALE-LMPRMLKRNVLPGVVN 454
GI+ NQ YN +I+ C + P L M++ P V
Sbjct: 643 DLQDKLQHLYYRIRKSGIHWNQEMYNCVIN-CCARALPLDELSGTFEEMIRYGFTPNTVT 701
Query: 455 YSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEM 514
++ L+ + K + F+ V LF + G+ + +Y T+I+ +G+ + M
Sbjct: 702 FNVLLDVYGKAKL-FKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKDYTNMSSAIKNM 759
Query: 515 IQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 574
+Y L+ + ++M ++ + M + P+ YTY +I+ + + +I
Sbjct: 760 QFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWI 819
Query: 575 DLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
D + E+K G+ PD+ +Y LI Y G + E L EM+ I+ D
Sbjct: 820 DEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPD 872
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 110/243 (45%), Gaps = 7/243 (2%)
Query: 381 NTIICNHILRVHCREGQFREALTLLED---FHEQGINLNQYSYNEIIHMICKESYPKMAL 437
N + + ILRV R ++ A L+++ FHE + +N +I+ K+ K+A
Sbjct: 173 NFVAYSLILRVLGRREEWDRAEDLIKELCGFHE--FQKSYQVFNTVIYACTKKGNVKLAS 230
Query: 438 ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISI 497
+ ML+ V P V L+ G ++ N E E F+ + K GI + Y+++I+I
Sbjct: 231 KWFHMMLEFGVRPNVATIGMLM-GLYQKNWNVEEAEFAFSHMRKFGIVCES-AYSSMITI 288
Query: 498 HGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPN 557
+ R R KA M Q + ++ ++ + +M +A ++ M G PN
Sbjct: 289 YTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPN 348
Query: 558 LYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFG 617
+ Y LI G+ KI ++ A LF + G+ PD +Y +I + + E +
Sbjct: 349 IIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQ 408
Query: 618 EMK 620
E+K
Sbjct: 409 ELK 411
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 106/240 (44%), Gaps = 3/240 (1%)
Query: 370 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 429
++ ML+ +RPN ++ ++ + EA + GI + + +Y+ +I + +
Sbjct: 233 FHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGI-VCESAYSSMITIYTR 291
Query: 430 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTK 489
A E++ M + V + N+ +++ ++ +Q E+ E + + AG + N
Sbjct: 292 LRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYS-QQGKMELAESILVSMEAAGFSPNII 350
Query: 490 TYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM 549
Y TLI+ +G+ K A F + L PDE SY ++I + A +QE+
Sbjct: 351 AYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQEL 410
Query: 550 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
R G PN + LI+ K D A + ++M G + +L A Y K G+I
Sbjct: 411 KRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIILQA-YEKVGKI 469
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/375 (21%), Positives = 147/375 (39%), Gaps = 45/375 (12%)
Query: 239 VTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNS--HCFNAVIHGFCQRGAVNEALEVL 296
V Y +R L D A L+++L C H FN VI+ ++G V A +
Sbjct: 175 VAYSLILRVLGRREEWDRAEDLIKEL-CGFHEFQKSYQVFNTVIYACTKKGNVKLASKWF 233
Query: 297 EEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNK 356
M P+V + ML+ + K +V I Y+S+I + +
Sbjct: 234 HMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESA-YSSMITIY-TR 291
Query: 357 LKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLN 416
L+ LYDK+ EV + M Q+ +R + L +L + +QG
Sbjct: 292 LR---LYDKAEEVIDLMKQDRVRL----------------KLENWLVMLNAYSQQG---- 328
Query: 417 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLF 476
++A ++ M P ++ Y+TLI+G+ K E + LF
Sbjct: 329 ---------------KMELAESILVSMEAAGFSPNIIAYNTLITGYGK-IFKMEAAQGLF 372
Query: 477 TRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNI 536
RL G+ + +Y ++I GR +A + E+ + P+ + LI +
Sbjct: 373 HRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKY 432
Query: 537 REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTY 596
+ + A ++M+ IGC + ++ + K+ ID+ + I + ++
Sbjct: 433 GDRDGAIKTIEDMTGIGCQYS-SILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSF 491
Query: 597 TVLIAWYHKHGRIGE 611
+ L+ Y KHG + +
Sbjct: 492 SSLVMAYVKHGMVDD 506
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 12/171 (7%)
Query: 307 DVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKS 366
DV SYN ++ A+ K D IK + S+ L N L DK
Sbjct: 732 DVISYNTIIAAYGKNKDYTNMS--------SAIKNMQFDGFSVSLEAYNTLLDAYGKDKQ 783
Query: 367 LEVYNSMLQNAIR----PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 422
+E + S+L+ + P+ N ++ ++ +G E +L++ E G+ + SYN
Sbjct: 784 MEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNT 843
Query: 423 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 473
+I + A+ L+ M RN++P V Y+ L++ + E ++
Sbjct: 844 LIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIK 894
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 163/392 (41%), Gaps = 58/392 (14%)
Query: 236 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 295
P V Y I L +C + AH+L +++ + +N + A++ + + G + A +
Sbjct: 148 PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTL 207
Query: 296 LEEMKSSRT-FPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 354
LE MKSS PDV++Y++L+ +F + I+P+ + Y +LI
Sbjct: 208 LERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLI---- 263
Query: 355 NKLKGQQLYDKS---LEVYNSMLQ----NAIRPNTIICNHILRVHCREGQFREALTLLED 407
Y K+ +E+ ++++Q + +P++ N LR GQ E
Sbjct: 264 ------DAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEK 317
Query: 408 FHEQGINLNQYSYNEIIHMICKE-SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ 466
F GI N ++N ++ K +Y KM+ +M M K + +V Y+ +I F +
Sbjct: 318 FQSSGIEPNIRTFNILLDSYGKSGNYKKMSA-VMEYMQKYHYSWTIVTYNVVIDAFGR-A 375
Query: 467 SNFEMVERLFTRLVKAGITFNT-KTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVS 525
+ + +E LF RL+++ F + T +L+ +GR K K I L E S
Sbjct: 376 GDLKQMEYLF-RLMQSERIFPSCVTLCSLVRAYGRASKADK--------IGGVLRFIENS 426
Query: 526 YTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 585
L VF N CL+D + +++ + + M+
Sbjct: 427 DIRLDLVFFN---------------------------CLVDAYGRMEKFAEMKGVLELME 459
Query: 586 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFG 617
+KG PD +TY ++ Y G +L G
Sbjct: 460 KKGFKPDKITYRTMVKAYRISGMTTHVKELHG 491
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 10/142 (7%)
Query: 487 NTKTYTTLISIHGRTRKRHKAYCRFGEMI-QSCLCPDEVSYTALIAVFCNIREMNVACAL 545
N Y LI + G+ ++ KA+ F EMI + C+ EV YTAL++ + + A L
Sbjct: 149 NVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEV-YTALVSAYSRSGRFDAAFTL 207
Query: 546 FQEM-SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYH 604
+ M S C P+++TY+ LI F ++ D L +M+R+GI P+ +TY LI Y
Sbjct: 208 LERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYG 267
Query: 605 KHGRIGEKNKLFGEMKANCILL 626
K K+F EM++ I +
Sbjct: 268 KA-------KMFVEMESTLIQM 282
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 110/249 (44%), Gaps = 3/249 (1%)
Query: 379 RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 438
+PN I ++ + + Q +A L ++ +G +N Y ++ + A
Sbjct: 147 KPNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFT 206
Query: 439 LMPRMLKR-NVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISI 497
L+ RM N P V YS LI F + + F+ V+ L + + + GI NT TY TLI
Sbjct: 207 LLERMKSSHNCQPDVHTYSILIKSFLQVFA-FDKVQDLLSDMRRQGIRPNTITYNTLIDA 265
Query: 498 HGRTRKRHKAYCRFGEMIQSCLC-PDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLP 556
+G+ + + +M+ C PD + + + F ++ + +++ G P
Sbjct: 266 YGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEP 325
Query: 557 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 616
N+ T+ L+D + K + + + M++ +VTY V+I + + G + + LF
Sbjct: 326 NIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLF 385
Query: 617 GEMKANCIL 625
M++ I
Sbjct: 386 RLMQSERIF 394
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 113/267 (42%), Gaps = 17/267 (6%)
Query: 205 PNIHTYTIMMSCGDIRLA----AEILGKIYRSGGNPTVVTYGTYIRGLCECG-YVDVAHK 259
P++HTY+I++ A ++L + R G P +TY T I + +V++
Sbjct: 219 PDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMEST 278
Query: 260 LVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 319
L++ L +S N+ + F G + E+ +SS P++ ++N+LL+++
Sbjct: 279 LIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYG 338
Query: 320 KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA-I 378
K G+ +IV Y +I G+ K +E ++Q+ I
Sbjct: 339 KSGNYKKMSAVMEYMQKYHYSWTIVTYNVVI-----DAFGRAGDLKQMEYLFRLMQSERI 393
Query: 379 RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK-ESYPKM-- 435
P+ + ++R + R + + +L I L+ +N ++ + E + +M
Sbjct: 394 FPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKG 453
Query: 436 ALELMPRMLKRNVLPGVVNYSTLISGF 462
LELM K+ P + Y T++ +
Sbjct: 454 VLELME---KKGFKPDKITYRTMVKAY 477
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 165/381 (43%), Gaps = 34/381 (8%)
Query: 228 KIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRG 287
K++ + V Y + + GL CG ++ A +L R + +S + A+I G Q G
Sbjct: 195 KVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-----KDSVSWAAMIKGLAQNG 249
Query: 288 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYT 347
EA+E EMK D Y + +L A G + + I +
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 348 SLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLE 406
+LI + CK K Y K+ V++ M Q N + ++ + + G+ EA+ +
Sbjct: 310 ALIDMYCKCKC---LHYAKT--VFDRMKQK----NVVSWTAMVVGYGQTGRAEEAVKIFL 360
Query: 407 DFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYST----LISGF 462
D GI+ + Y+ + I S +LE + + + G+++Y T L++ +
Sbjct: 361 DMQRSGIDPDHYTLGQAISACANVS----SLEEGSQFHGKAITSGLIHYVTVSNSLVTLY 416
Query: 463 AKEQSNFEMVERLFTRL-VKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCP 521
K + + RLF + V+ + ++T ++S + + + + F +M+Q L P
Sbjct: 417 GK-CGDIDDSTRLFNEMNVRDAV-----SWTAMVSAYAQFGRAVETIQLFDKMVQHGLKP 470
Query: 522 DEVSYTALIAVFCNIREMNVACALFQEM-SRIGCLPNLYTYTCLIDGFCKIDYIDLATQL 580
D V+ T +I+ + F+ M S G +P++ Y+C+ID F + ++ A +
Sbjct: 471 DGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRF 530
Query: 581 FDEMKRKGIFPDVVTYTVLIA 601
+ M PD + +T L++
Sbjct: 531 INGMP---FPPDAIGWTTLLS 548
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 121/273 (44%), Gaps = 24/273 (8%)
Query: 362 LYDKSLEVYNS---------MLQNAIR------PNTIICNHILRVHCREGQFREALTLLE 406
L D++ +YNS M+++A++ +++ +++ + G +EA+
Sbjct: 200 LDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFR 259
Query: 407 DFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ 466
+ QG+ ++QY + ++ ++ +++ N + S LI + K +
Sbjct: 260 EMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCK 319
Query: 467 SNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSY 526
+ +F R+ + N ++T ++ +G+T + +A F +M +S + PD +
Sbjct: 320 C-LHYAKTVFDRMKQK----NVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTL 374
Query: 527 TALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 586
I+ N+ + + G + + L+ + K ID +T+LF+EM
Sbjct: 375 GQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNV 434
Query: 587 KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
+ D V++T +++ Y + GR E +LF +M
Sbjct: 435 R----DAVSWTAMVSAYAQFGRAVETIQLFDKM 463
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 118/271 (43%), Gaps = 15/271 (5%)
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ---GINLNQYSYNEIIHMICK 429
+L P++ I +++ + + G+ + +LE Q + ++ +Y ++
Sbjct: 405 LLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVN 464
Query: 430 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVK-AGITFNT 488
A +++ M + V + Y+ L+ G+ K Q + E L + + AGI +
Sbjct: 465 AGLMDRARQVLAEMARMGVPANRITYNVLLKGYCK-QLQIDRAEDLLREMTEDAGIEPDV 523
Query: 489 KTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQE 548
+Y +I A F EM + P ++SYT L+ F + +A +F E
Sbjct: 524 VSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDE 583
Query: 549 M---SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHK 605
M R+ +L + L++G+C++ I+ A ++ MK G +P+V TY L +
Sbjct: 584 MMNDPRVKV--DLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQ 641
Query: 606 HGRIGEKNKLFGEMKANCILLDDGIKKLQDP 636
+ G+ L+ E+K C +KK + P
Sbjct: 642 ARKPGDALLLWKEIKERC-----AVKKKEAP 667
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 113/252 (44%), Gaps = 15/252 (5%)
Query: 205 PNIHTYTIMMSC----GDIRLAAEILGKIYRS---GGNPTVVTYGTYIRGLCECGYVDVA 257
P+ YT +M G + A +L + R +P VTY T + G +D A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF-PDVYSYNMLLN 316
+++ ++ P N +N ++ G+C++ ++ A ++L EM PDV SYN++++
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 317 AFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQ-QLYDKSLEVYNSMLQ 375
D I P+ ++YT+L+ + GQ +L ++ V++ M+
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAF--AMSGQPKLANR---VFDEMMN 586
Query: 376 NA-IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 434
+ ++ + I N ++ +CR G +A ++ E G N +Y + + + + P
Sbjct: 587 DPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPG 646
Query: 435 MALELMPRMLKR 446
AL L + +R
Sbjct: 647 DALLLWKEIKER 658
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 5/183 (2%)
Query: 441 PRMLKRNVLPGVVNYSTLISGFAKE---QSNFEMVERLFTRLVKAGITFNTKTYTTLISI 497
P +L + P Y+TL+ G+ K M+E + R + TYTT++S
Sbjct: 403 PPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAM-RRQDDRNSHPDEVTYTTVVSA 461
Query: 498 HGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR-IGCLP 556
+A EM + + + ++Y L+ +C +++ A L +EM+ G P
Sbjct: 462 FVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEP 521
Query: 557 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 616
++ +Y +IDG ID A F+EM+ +GI P ++YT L+ + G+ N++F
Sbjct: 522 DVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVF 581
Query: 617 GEM 619
EM
Sbjct: 582 DEM 584
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 102/228 (44%), Gaps = 30/228 (13%)
Query: 381 NTIICNHILRVHCREGQFREALTLLEDF--HEQGINL-NQYSYNEIIHMICKESYPKMAL 437
N I C + + + F+ L E G N+ S ++ + +E + K AL
Sbjct: 126 NEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEAL 185
Query: 438 ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITF--NTKTYTTLI 495
RM + + P V Y+T+I+ + NF+ L ++ G + +T TYT LI
Sbjct: 186 ATFYRMKEYHCKPDVYAYNTIINALCR-VGNFKKARFLLDQMQLPGFRYPPDTYTYTILI 244
Query: 496 SIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCL 555
S +YCR+G C + R M A +F+EM G +
Sbjct: 245 S----------SYCRYG---MQTGCRKAIR-----------RRMWEANRMFREMLFRGFV 280
Query: 556 PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWY 603
P++ TY CLIDG CK + I A +LF++MK KG P+ VTY I +Y
Sbjct: 281 PDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYY 328
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 15/219 (6%)
Query: 285 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 344
+ G V EAL MK PDVY+YN ++NA C+ G+ +
Sbjct: 177 EEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPD 236
Query: 345 NYTSLILL-----------CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 393
YT IL+ C+ ++ +++++ + ++ ML P+ + N ++ C
Sbjct: 237 TYTYTILISSYCRYGMQTGCRKAIR-RRMWEAN-RMFREMLFRGFVPDVVTYNCLIDGCC 294
Query: 394 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLK-RNVLPGV 452
+ + AL L ED +G NQ +YN I + + A+E+M M K + +PG
Sbjct: 295 KTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGS 354
Query: 453 VNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTY 491
Y+ LI + + E + L +V+AG+ TY
Sbjct: 355 STYTPLIHALVETRRAAEARD-LVVEMVEAGLVPREYTY 392
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 100/242 (41%), Gaps = 23/242 (9%)
Query: 375 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 434
+N + +I C +++ EG +EAL E + Y+YN II+ +C+ K
Sbjct: 160 KNVVTTASITC--LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFK 217
Query: 435 MALELMPRMLKRNVLPG------VVNYSTLISGFAKE----------QSNFEMVERLFTR 478
A L+ +M LPG Y+ LIS + + + R+F
Sbjct: 218 KARFLLDQMQ----LPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFRE 273
Query: 479 LVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIRE 538
++ G + TY LI +T + +A F +M P++V+Y + I + E
Sbjct: 274 MLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNE 333
Query: 539 MNVACALFQEMSRIG-CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYT 597
+ A + + M ++G +P TYT LI + A L EM G+ P TY
Sbjct: 334 IEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYK 393
Query: 598 VL 599
++
Sbjct: 394 LV 395
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 105/260 (40%), Gaps = 27/260 (10%)
Query: 347 TSLILLCKNKLKGQQLYDK-SLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLL 405
T+ + C K G++ + K +L + M + +P+ N I+ CR G F++A LL
Sbjct: 164 TTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLL 223
Query: 406 EDFHEQGINL--NQYSYNEIIHMICKESYPKMALELMPR-----------MLKRNVLPGV 452
+ G + Y+Y +I C+ + + R ML R +P V
Sbjct: 224 DQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDV 283
Query: 453 VNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFG 512
V Y+ LI G K +E LF + G N TY + I + T + A
Sbjct: 284 VTYNCLIDGCCKTNRIGRALE-LFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAI---- 338
Query: 513 EMIQSCL-----CPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDG 567
EM+++ P +YT LI R A L EM G +P YTY + D
Sbjct: 339 EMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDA 398
Query: 568 FCKIDYIDLATQLFDEMKRK 587
+ LA+ L +E+ ++
Sbjct: 399 ---LSSEGLASTLDEELHKR 415
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 2/260 (0%)
Query: 362 LYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL-LEDFHEQGINLNQYSY 420
+ D SL V+ + + I N +L ++EA + +E GI + +Y
Sbjct: 131 MLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETY 190
Query: 421 NEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLV 480
N +I + C+ + ++ M ++ + P ++ +ISGF E + E V ++ +
Sbjct: 191 NRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDE-VGKVLAMMK 249
Query: 481 KAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMN 540
G+ TY I + +K +A M+ + + P+ V+Y+ LI FCN +
Sbjct: 250 DRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFE 309
Query: 541 VACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
A LF+ M GC P+ Y LI CK + A L E K P L+
Sbjct: 310 EAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLV 369
Query: 601 AWYHKHGRIGEKNKLFGEMK 620
K ++ E +L G++K
Sbjct: 370 NGLAKDSKVEEAKELIGQVK 389
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 101/266 (37%), Gaps = 43/266 (16%)
Query: 226 LGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQ 285
+ K+Y G P + TY I+ CE G ++ +V ++ K NS F +I GF
Sbjct: 177 MPKMY--GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYA 234
Query: 286 RGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVN 345
+E +VL MK V +YN+ + + CK+ +KP+ V
Sbjct: 235 EDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVT 294
Query: 346 YTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLL 405
Y+ H++ C E F EA L
Sbjct: 295 YS---------------------------------------HLIHGFCNEDDFEEAKKLF 315
Query: 406 EDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKE 465
+ +G + Y +I+ +CK + AL L +++N +P +L++G AK+
Sbjct: 316 KIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKD 375
Query: 466 QSNFEMVERLFTRLVKAGITFNTKTY 491
S E + L + VK T N + +
Sbjct: 376 -SKVEEAKELIGQ-VKEKFTRNVELW 399
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 114/286 (39%), Gaps = 12/286 (4%)
Query: 144 IKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLL-KCLXXXXXXXXXXXXXXXLMETG 202
I ++A +ML+H+ +VF + + ++S N LL CL G
Sbjct: 123 IVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYG 182
Query: 203 PLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAH 258
P++ TY M+ G + I+ ++ R G P ++G I G D
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 259 KLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAF 318
K++ + + + +N I C+R EA +L+ M S+ P+ +Y+ L++ F
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 319 CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNA 377
C + D KP Y +LI LCK G ++ +L + ++
Sbjct: 303 CNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKG---GD--FETALSLCKESMEKN 357
Query: 378 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 423
P+ I ++ ++ + EA L+ E+ N +NE+
Sbjct: 358 WVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK-FTRNVELWNEV 402
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 120/243 (49%), Gaps = 17/243 (6%)
Query: 379 RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 438
RPNT++ NH++ ++ + G+ +A + + H + N YS+N ++ K A
Sbjct: 79 RPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR----NLYSWNNMVSGYVKSGMLVRARV 134
Query: 439 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIH 498
+ M +R+ VV+++T++ G+A++ N + ++GI FN ++ L++
Sbjct: 135 VFDSMPERD----VVSWNTMVIGYAQD-GNLHEALWFYKEFRRSGIKFNEFSFAGLLTAC 189
Query: 499 GRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNL 558
++R+ G+++ + + V ++I + +M A F EM+ + ++
Sbjct: 190 VKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMT----VKDI 245
Query: 559 YTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE 618
+ +T LI G+ K+ ++ A +LF EM K + V++T LIA Y + G LF +
Sbjct: 246 HIWTTLISGYAKLGDMEAAEKLFCEMPEK----NPVSWTALIAGYVRQGSGNRALDLFRK 301
Query: 619 MKA 621
M A
Sbjct: 302 MIA 304
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 119/268 (44%), Gaps = 17/268 (6%)
Query: 369 VYNSMLQ-NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
V++SM + + + NT++ + ++G EAL ++F GI N++S+ ++
Sbjct: 135 VFDSMPERDVVSWNTMVIGY-----AQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTAC 189
Query: 428 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFN 487
K ++ + ++L L VV ++I +AK E +R F + I
Sbjct: 190 VKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAK-CGQMESAKRCFDEMTVKDIHI- 247
Query: 488 TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQ 547
+TTLIS + + A F EM + + VS+TALIA + N A LF+
Sbjct: 248 ---WTTLISGYAKLGDMEAAEKLFCEMPEK----NPVSWTALIAGYVRQGSGNRALDLFR 300
Query: 548 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 607
+M +G P +T++ + I + ++ M R + P+ + + LI Y K G
Sbjct: 301 KMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSG 360
Query: 608 RIGEKNKLFG--EMKANCILLDDGIKKL 633
+ ++F + K +C+ + I L
Sbjct: 361 SLEASERVFRICDDKHDCVFWNTMISAL 388
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/459 (20%), Positives = 184/459 (40%), Gaps = 62/459 (13%)
Query: 206 NIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH 265
N T+ M+S R K++ VVT+ T I G CG + + RKL
Sbjct: 70 NTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEE-ARKLF 128
Query: 266 CKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVX 325
++ +S +N +I G+ + + EAL + E+M + S++ ++ FC+ G+V
Sbjct: 129 DEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPER----NAVSWSAMITGFCQNGEVD 184
Query: 326 XXXX------XXXXXXXCQIKPSIV-------------NYTSLI------------LLCK 354
C + ++ Y SL+ L+
Sbjct: 185 SAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVG 244
Query: 355 NKLKGQ---------QLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLL 405
+GQ Q+ D + + + N + N +++ + + G A L
Sbjct: 245 YGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLF 304
Query: 406 EDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKE 465
+ ++ + S+N +I S + A L M R+ +++ ++SG+A
Sbjct: 305 DQMKDR----DTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAH----SWNMMVSGYAS- 355
Query: 466 QSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVS 525
N E+ F + + +T ++ ++I+ + + + +A F M PD +
Sbjct: 356 VGNVELARHYFEKTPEK----HTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHT 411
Query: 526 YTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 585
T+L++ + + + + Q + + +P++ + LI + + I + ++FDEMK
Sbjct: 412 LTSLLSASTGLVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMK 470
Query: 586 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 624
K +V+T+ +I Y HG E LFG MK+N I
Sbjct: 471 LK---REVITWNAMIGGYAFHGNASEALNLFGSMKSNGI 506
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 171/405 (42%), Gaps = 58/405 (14%)
Query: 238 VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 297
V++ I G C+ G VD A L RK+ K +S A++ G + ++EA VL
Sbjct: 167 AVSWSAMITGFCQNGEVDSAVVLFRKMPVK----DSSPLCALVAGLIKNERLSEAAWVLG 222
Query: 298 EMKS--SRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 355
+ S S VY+YN L+ + ++G Q++ + + + LC +
Sbjct: 223 QYGSLVSGREDLVYAYNTLIVGYGQRG---------------QVEAARCLFDQIPDLCGD 267
Query: 356 KLKGQ--QLYDKSLEVYNSMLQNAIR----------------PNTIICNHILRVHCREGQ 397
G+ + + K++ +NSM++ ++ +TI N ++ + +
Sbjct: 268 DHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSR 327
Query: 398 FREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMA-LELMPRMLKRNVLPGVVNYS 456
+A L + N + +S+N ++ Y + +EL ++ V+++
Sbjct: 328 MEDAFALFSEMP----NRDAHSWNMMV-----SGYASVGNVELARHYFEKTPEKHTVSWN 378
Query: 457 TLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIH-GRTRKRHKAYCRFGEMI 515
++I+ + K + E V+ LF R+ G + T T+L+S G R + +++
Sbjct: 379 SIIAAYEKNKDYKEAVD-LFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLG--MQMHQIV 435
Query: 516 QSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 575
+ PD + ALI ++ E+ + +F EM + T+ +I G+
Sbjct: 436 VKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMK---LKREVITWNAMIGGYAFHGNAS 492
Query: 576 LATQLFDEMKRKGIFPDVVTY-TVLIAWYHKHGRIGEKNKLFGEM 619
A LF MK GI+P +T+ +VL A H G + E F M
Sbjct: 493 EALNLFGSMKSNGIYPSHITFVSVLNACAHA-GLVDEAKAQFVSM 536
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 120/290 (41%), Gaps = 27/290 (9%)
Query: 113 IVGY---CKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLE 169
I GY + +D+F FS ++P+ +N+++ +AS +E A F E
Sbjct: 319 IDGYVHVSRMEDAFALFS---EMPNRDAHSWNMMVSGYASVGNVELARHYFEKTP----E 371
Query: 170 LHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCG----DIRLAAEI 225
H S N ++ + G P+ HT T ++S ++RL +
Sbjct: 372 KHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQ- 430
Query: 226 LGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQ 285
+ +I P V + I CG + + ++ ++ K + +NA+I G+
Sbjct: 431 MHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVI---TWNAMIGGYAF 487
Query: 286 RGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXC-QIKPSIV 344
G +EAL + MKS+ +P ++ +LNA G V +I+P +
Sbjct: 488 HGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQME 547
Query: 345 NYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 394
+Y+SL+ N GQ +++++ + SM P+ + +L CR
Sbjct: 548 HYSSLV----NVTSGQGQFEEAMYIITSM---PFEPDKTVWGALLDA-CR 589
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 147/373 (39%), Gaps = 7/373 (1%)
Query: 245 IRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRT 304
+ GL G D A KL K+ K LN+ F I FC+ N+ L +++E+K +
Sbjct: 159 LAGLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANL 218
Query: 305 FPDVYSYNML-LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLY 363
+ +L L++ CK KP + Y ++ + + LY
Sbjct: 219 NINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYR---VIAEAFVVTGNLY 275
Query: 364 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 423
++ + V + + P + + + EA + E ++ + +
Sbjct: 276 ERQV-VLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDAL 334
Query: 424 IHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAG 483
I + P A+E + M+ LP + S L + + ++ + + L G
Sbjct: 335 IGSVSAVD-PDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLI-KAYELLSSKG 392
Query: 484 ITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVAC 543
++Y+ +IS + + ++Y EM + L PD Y ALI C + A
Sbjct: 393 YFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAK 452
Query: 544 ALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWY 603
L+ EM GC NL TY LI + + + +LFD+M +GI PD Y LI
Sbjct: 453 KLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIYMSLIEGL 512
Query: 604 HKHGRIGEKNKLF 616
K +I ++F
Sbjct: 513 CKETKIEAAMEVF 525
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/507 (18%), Positives = 179/507 (35%), Gaps = 79/507 (15%)
Query: 74 FGSWV-ETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDL 132
F +W + G+SH + I + +++ + AL + + + LLD
Sbjct: 68 FFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQV----------KSNKILLDS 117
Query: 133 PHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXX 192
V+ LI + A V A + G E+H CN LL L
Sbjct: 118 S-----VYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLT--------- 163
Query: 193 XXXXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECG 252
S G A ++ K+ G + + +G YI C
Sbjct: 164 ----------------------SDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSS 201
Query: 253 YVDVAHKLVRKLHCKLHPLNSHCFNAVI-HGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 311
+ +LV ++ +N +I H C+ +A +LEE+++ PD +Y
Sbjct: 202 ETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAY 261
Query: 312 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-------LCKNKLKGQQLYD 364
++ AF G++ + P +Y + IL L + K + +
Sbjct: 262 RVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVS 321
Query: 365 KSLEVYNSMLQ------NAIRPNTII-----------------CNHILRVHCREGQFREA 401
+ N +L +A+ P++ + + + + CR +
Sbjct: 322 GKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHL 381
Query: 402 LTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISG 461
+ E +G SY+ +I +CK + + + M K + P V Y+ LI
Sbjct: 382 IKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEA 441
Query: 462 FAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCP 521
K + ++L+ + G N TY LI + ++ F +M++ + P
Sbjct: 442 CCKAEM-IRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEP 500
Query: 522 DEVSYTALIAVFCNIREMNVACALFQE 548
DE Y +LI C ++ A +F++
Sbjct: 501 DETIYMSLIEGLCKETKIEAAMEVFRK 527
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 127/340 (37%), Gaps = 50/340 (14%)
Query: 117 CKCDDSFEQFSTLLDLPH----HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHI 172
CKC + F L +L + + + V+ + F L V + +G+
Sbjct: 234 CKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVA--P 291
Query: 173 RSCN---FLLKCLXXXXXXXXXXXXXXXLMETGPLPN--IHTYTIMMSCGDIRLAAEILG 227
RS + F+L + + P+ N + +S D A E L
Sbjct: 292 RSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLV 351
Query: 228 KIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRG 287
+ +G P + T + LC D K L K + ++ +I C+ G
Sbjct: 352 YMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAG 411
Query: 288 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYT 347
V E+ L+EMK PDV YN L+ A CK I+P+
Sbjct: 412 RVRESYTALQEMKKEGLAPDVSLYNALIEACCKAE---------------MIRPA----- 451
Query: 348 SLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 407
++L+D+ M + N N ++R EG+ E+L L +
Sbjct: 452 ------------KKLWDE-------MFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDK 492
Query: 408 FHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 447
E+GI ++ Y +I +CKE+ + A+E+ + ++R+
Sbjct: 493 MLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERD 532
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/267 (21%), Positives = 111/267 (41%), Gaps = 5/267 (1%)
Query: 363 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 422
YD + +++ M + NT+ + CR + + L L+++ + +N+N
Sbjct: 168 YDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNINGSIIAL 227
Query: 423 II-HMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVK 481
+I H +CK S A ++ + + P + Y + F + +E + + + K
Sbjct: 228 LILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYER-QVVLKKKRK 286
Query: 482 AGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCP-DEVSYTALIAVFCNIREMN 540
G+ + Y I + + KR E+I S P D ALI + + +
Sbjct: 287 LGVAPRSSDYRAFI-LDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAV-DPD 344
Query: 541 VACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
A M G LP + T + L C+ D D + ++ + KG F ++ +Y+++I
Sbjct: 345 SAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMI 404
Query: 601 AWYHKHGRIGEKNKLFGEMKANCILLD 627
++ K GR+ E EMK + D
Sbjct: 405 SFLCKAGRVRESYTALQEMKKEGLAPD 431
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 181/448 (40%), Gaps = 60/448 (13%)
Query: 236 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKL--HPLNSHCF--NAVIHGFCQRGAVNE 291
P ++ ++ L C + L R++H + +S F N +I + + +
Sbjct: 127 PDSISISCVLKALSGCDDFWLG-SLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIES 185
Query: 292 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXC-QIKPSIVNYTSLI 350
A +V +EM S R DV S+N +++ + + G C KP+ V S+
Sbjct: 186 ARKVFDEM-SER---DVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVF 241
Query: 351 LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHE 410
C ++ LEV+ M++N I+ + +CN ++ + + G A L ++ E
Sbjct: 242 QACGQS--SDLIF--GLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSE 297
Query: 411 QGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFE 470
+ + +Y II K A+ L M G+ ++ +ISG + + E
Sbjct: 298 K----DSVTYGAIISGYMAHGLVKEAMALFSEMES----IGLSTWNAMISGLMQNNHHEE 349
Query: 471 MVERLFTRLVKAGITFNTKTYTTLI-------------SIHGRTRKRHKA---------- 507
++ F +++ G NT T ++L+ IH +
Sbjct: 350 VINS-FREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSII 408
Query: 508 --YCRFG------EMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLY 559
Y + G + +C +++TA+I + + + AC+LF +M +G P+
Sbjct: 409 DNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDV 468
Query: 560 TYTCLIDGFCKIDYIDLATQLFDEMKRK-GIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE 618
T T ++ F D+A +FD M K I P V Y +++ + G++ + + +
Sbjct: 469 TLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISK 528
Query: 619 MKANCI-----LLDDGIKKLQDPKLVQF 641
M + I L +G L D ++ +F
Sbjct: 529 MPIDPIAKVWGALLNGASVLGDLEIARF 556
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 120/297 (40%), Gaps = 54/297 (18%)
Query: 83 FSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLL------------ 130
+ + + + ++I+ F A M+ E+ ++R I +C S E F L+
Sbjct: 91 YQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINR 150
Query: 131 ------DLPHH----SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLK 180
+P S FN ++ + S + + H++FVSA +G+E+ N L+K
Sbjct: 151 AIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIK 210
Query: 181 CLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVT 240
L G++ A ++L + + P V+T
Sbjct: 211 GLC-------------------------------ESGNLEAALQLLDEFPQQKSRPNVMT 239
Query: 241 YGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMK 300
+ IRG C G + A KL+ ++ + ++ FN +I G ++G V E +++LE MK
Sbjct: 240 FSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMK 299
Query: 301 SSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNK 356
P+ +Y +L K ++PS ++Y ++L LC+ K
Sbjct: 300 VKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETK 356
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 117/280 (41%), Gaps = 40/280 (14%)
Query: 216 CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHC 275
G I A EIL + G P+ ++ + L D HK+ +++ C
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACC 204
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
N +I G C+ G + AL++L+E ++ P+V +++ L+ FC KG
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGK------------ 252
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
++++ ++ M + I P+TI N ++ ++
Sbjct: 253 ---------------------------FEEAFKLLERMEKERIEPDTITFNILISGLRKK 285
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
G+ E + LLE +G N +Y E+++ + + A E+M +M+ + P ++Y
Sbjct: 286 GRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSY 345
Query: 456 STLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
++ G + +S EM + + ++V G T + ++
Sbjct: 346 KKMVLGLCETKSVVEM-DWVLRQMVNHGFVPKTLMWWKVV 384
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 115/270 (42%), Gaps = 13/270 (4%)
Query: 231 RSGGNPTVVTYGTYIRGLCECGYVDVAHKLVR--KLHCKLHPLNSHCFNAV-IHGFCQRG 287
R PT Y I + D +++R KL + +N + I+G G
Sbjct: 88 RKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLA-G 146
Query: 288 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAF--CKKGDVXXXXXXXXXXXXCQIKPSIVN 345
+N A+E+L M +P S+N +LN K D +I +N
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLN 206
Query: 346 YTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLL 405
+L K + L + +L++ + Q RPN + + ++R C +G+F EA LL
Sbjct: 207 -----ILIKGLCESGNL-EAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 406 EDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKE 465
E ++ I + ++N +I + K+ + ++L+ RM + P Y ++ G +
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDK 320
Query: 466 QSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
+ N E E + ++++ G+ + +Y ++
Sbjct: 321 KRNLEAKE-MMSQMISWGMRPSFLSYKKMV 349
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 46/92 (50%)
Query: 529 LIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKG 588
LI C + A L E + PN+ T++ LI GFC + A +L + M+++
Sbjct: 208 LIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKER 267
Query: 589 IFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
I PD +T+ +LI+ K GR+ E L MK
Sbjct: 268 IEPDTITFNILISGLRKKGRVEEGIDLLERMK 299
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 101/238 (42%), Gaps = 3/238 (1%)
Query: 364 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 423
++++E+ M P++ N IL + F E + + G+ ++ N +
Sbjct: 149 NRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNIL 208
Query: 424 IHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAG 483
I +C+ + AL+L+ ++ P V+ +S LI GF + FE +L R+ K
Sbjct: 209 IKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCN-KGKFEEAFKLLERMEKER 267
Query: 484 ITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLC-PDEVSYTALIAVFCNIREMNVA 542
I +T T+ LIS R + R + E ++ C P+ +Y ++ + + A
Sbjct: 268 IEPDTITFNILIS-GLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEA 326
Query: 543 CALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
+ +M G P+ +Y ++ G C+ + + +M G P + + ++
Sbjct: 327 KEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVV 384
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 106/241 (43%), Gaps = 1/241 (0%)
Query: 381 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
+T N+++ + +G +A + E + L+ +Y II + K A +L
Sbjct: 277 DTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLF 336
Query: 441 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGR 500
+M +R + P +S+L+ K + +++ + G + + +LI + +
Sbjct: 337 QQMKERKLRPSFSVFSSLVDSMGK-AGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAK 395
Query: 501 TRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYT 560
K A + EM +S P+ YT +I ++ VA +F++M + G LP T
Sbjct: 396 AGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPST 455
Query: 561 YTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
Y+CL++ +D A ++++ M G+ P + +Y L+ + K+ EMK
Sbjct: 456 YSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMK 515
Query: 621 A 621
A
Sbjct: 516 A 516
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/355 (21%), Positives = 143/355 (40%), Gaps = 17/355 (4%)
Query: 254 VDVAHKLVRKLHCKLHPL---NSHCFNAVIHGFCQRGAVNEALEVLEEM-KSSRTFPDVY 309
VD A L R K P + C+ + G Q + EEM + S + D+
Sbjct: 185 VDAALSLFR--WAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLS 242
Query: 310 --SYNMLLNAFCK--KGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDK 365
+YN ++ K K +V C+I Y +L++L NK L K
Sbjct: 243 FNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQ--TYNNLMMLFLNK----GLPYK 296
Query: 366 SLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIH 425
+ E+Y SM + + I+ + G+ A L + E+ + + ++ ++
Sbjct: 297 AFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVD 356
Query: 426 MICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGIT 485
+ K ++++ M P + +LI +AK + RL+ + K+G
Sbjct: 357 SMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAK-AGKLDTALRLWDEMKKSGFR 415
Query: 486 FNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACAL 545
N YT +I H ++ K A F +M ++ P +Y+ L+ + +++ A +
Sbjct: 416 PNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKI 475
Query: 546 FQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
+ M+ G P L +Y L+ +D+A ++ EMK G DV VL+
Sbjct: 476 YNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLM 530
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/373 (20%), Positives = 153/373 (41%), Gaps = 12/373 (3%)
Query: 232 SGGNPTVVTYGTYIRGLCECGYVDVAH---KLVRKLHCKLHPLNSHCFNAVIHGFCQRGA 288
S G+ + Y I+ L + ++VA K ++ CK+ ++ +N ++ F +G
Sbjct: 237 SHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKI---DTQTYNNLMMLFLNKGL 293
Query: 289 VNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTS 348
+A E+ E M+ + + D +Y +++ + K G + +++PS ++S
Sbjct: 294 PYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSS 353
Query: 349 LILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 408
L+ + + D S++VY M RP+ + ++ + + G+ AL L ++
Sbjct: 354 LV----DSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEM 409
Query: 409 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN 468
+ G N Y II K ++A+ + M K LP YS L+ A
Sbjct: 410 KKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAG-SGQ 468
Query: 469 FEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTA 528
+ +++ + AG+ +Y +L+++ R A EM D V +
Sbjct: 469 VDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVD-VCASD 527
Query: 529 LIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKG 588
++ ++ +++A + M G N + L + K D A L + +
Sbjct: 528 VLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSA 587
Query: 589 IFPDVVTYTVLIA 601
D+V YT ++A
Sbjct: 588 GKVDLVLYTSILA 600
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 101/222 (45%), Gaps = 2/222 (0%)
Query: 404 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 463
+++D G +L+ +YN++I + K ++A + + Y+ L+ F
Sbjct: 231 MVQDSSSHG-DLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFL 289
Query: 464 KEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDE 523
+ ++ E ++ + K + TY +I ++ + A+ F +M + L P
Sbjct: 290 NKGLPYKAFE-IYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSF 348
Query: 524 VSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE 583
+++L+ ++ + ++ EM G P+ + LID + K +D A +L+DE
Sbjct: 349 SVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDE 408
Query: 584 MKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 625
MK+ G P+ YT++I + K G++ +F +M+ L
Sbjct: 409 MKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFL 450
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 113/278 (40%), Gaps = 16/278 (5%)
Query: 111 RDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNV---LIKVFASNSMLEHAHQVFVSAKNVG 167
RD VG FE+ + D H L FN +I+ A LE A F A+ G
Sbjct: 219 RDFVG---IQSLFEEM--VQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESG 273
Query: 168 LELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLAA 223
++ ++ N L+ + +T L + TY +++ G + A
Sbjct: 274 CKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAF 333
Query: 224 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 283
++ ++ P+ + + + + + G +D + K+ ++ H ++ F ++I +
Sbjct: 334 KLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSY 393
Query: 284 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 343
+ G ++ AL + +EMK S P+ Y M++ + K G + P+
Sbjct: 394 AKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTP 453
Query: 344 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 381
Y+ L+ + G D ++++YNSM +RP
Sbjct: 454 STYSCLLEMH----AGSGQVDSAMKIYNSMTNAGLRPG 487
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 420 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRL 479
+N ++ +C+E A + LK P + ++ L+SG+ + E + +
Sbjct: 183 FNALLRTLCQEKSMTDARNVY-HSLKHQFQPDLQTFNILLSGWKSSEEAEAFFEEMKGKG 241
Query: 480 VKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREM 539
+K + TY +LI ++ + R+ KAY +M + PD ++YT +I I +
Sbjct: 242 LKPDVV----TYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQP 297
Query: 540 NVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 599
+ A + +EM GC P++ Y I FC + A +L DEM +KG+ P+ TY +
Sbjct: 298 DKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLF 357
Query: 600 IAWYHKHGRIGEKNKLFGEMKAN 622
+G +L+ M N
Sbjct: 358 FRVLSLANDLGRSWELYVRMLGN 380
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 9/211 (4%)
Query: 205 PNIHTYTIMMSCGDIRLAAEILGKIYRSGG-NPTVVTYGTYIRGLCECGYVDVAHKLVRK 263
P++ T+ I++S AE + + G P VVTY + I C+ ++ A+KL+ K
Sbjct: 212 PDLQTFNILLSGWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDK 271
Query: 264 LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGD 323
+ + + + VI G G ++A EVL+EMK +PDV +YN + FC
Sbjct: 272 MREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARR 331
Query: 324 VXXXXXXXXXXXXCQIKPSIVNYTSL--ILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 381
+ + P+ Y +L N L +S E+Y ML N PN
Sbjct: 332 LGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDL------GRSWELYVRMLGNECLPN 385
Query: 382 TIICNHILRVHCREGQFREALTLLEDFHEQG 412
T C ++++ R + A+ L ED +G
Sbjct: 386 TQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 99/244 (40%), Gaps = 36/244 (14%)
Query: 271 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSS-----RTF-------------------- 305
++ CFNA++ CQ ++ +A V +K +TF
Sbjct: 178 FDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAFFEEM 237
Query: 306 ------PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 359
PDV +YN L++ +CK ++ + P ++ YT++I L G
Sbjct: 238 KGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVI--GGLGLIG 295
Query: 360 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 419
Q DK+ EV M + P+ N +R C + +A L+++ ++G++ N +
Sbjct: 296 QP--DKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATT 353
Query: 420 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRL 479
YN ++ + + EL RML LP + LI F K +M RL+ +
Sbjct: 354 YNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMF-KRHEKVDMAMRLWEDM 412
Query: 480 VKAG 483
V G
Sbjct: 413 VVKG 416
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 1/177 (0%)
Query: 443 MLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTR 502
M + + P VV Y++LI + K++ E +L ++ + T + TYTT+I G
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKDRE-IEKAYKLIDKMREEEETPDVITYTTVIGGLGLIG 295
Query: 503 KRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYT 562
+ KA EM + PD +Y A I FC R + A L EM + G PN TY
Sbjct: 296 QPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYN 355
Query: 563 CLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
+ + + +L+ M P+ + LI + +H ++ +L+ +M
Sbjct: 356 LFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDM 412
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 1/178 (0%)
Query: 411 QGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFE 470
+G+ + +YN +I + CK+ + A +L+ +M + P V+ Y+T+I G +
Sbjct: 240 KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGL-IGQPD 298
Query: 471 MVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALI 530
+ + + G + Y I R+ A EM++ L P+ +Y
Sbjct: 299 KAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFF 358
Query: 531 AVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKG 588
V ++ + L+ M CLPN + LI F + + +D+A +L+++M KG
Sbjct: 359 RVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 474 RLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVF 533
LF + + G+ NT TYTTLI + A F EM+ + PD ++Y L+
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 534 CNIREMNVACA---------LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM 584
C ++ A LF +S G PN+ TYT +I GFCK + + A LF +M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 585 KRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 621
K G PD TY LI + + G +L EM++
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 158
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 9/128 (7%)
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
F EM Q L + V+YT LI + ++A +F+EM G P++ TY L+DG CK
Sbjct: 4 FREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCK 63
Query: 571 IDYIDLAT---------QLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 621
++ A LF + KG+ P+VVTYT +I+ + K G E LF +MK
Sbjct: 64 NGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKE 123
Query: 622 NCILLDDG 629
+ L D G
Sbjct: 124 DGPLPDSG 131
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 85/192 (44%), Gaps = 15/192 (7%)
Query: 259 KLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAF 318
+L R++ + N+ + +I G Q G + A E+ +EM S PD+ +YN+LL+
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 319 CKKGDVXXXXXXXXXXXXCQ---------IKPSIVNYTSLIL-LCKNKLKGQQLYDKSLE 368
CK G + +KP++V YT++I CK K +++
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFK-----EEAYT 116
Query: 369 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 428
++ M ++ P++ N ++R H R+G + L+++ + +Y + M+
Sbjct: 117 LFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLH 176
Query: 429 KESYPKMALELM 440
K LE++
Sbjct: 177 DGRLDKGFLEML 188
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 13/162 (8%)
Query: 198 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
+ + G + N TYT ++ GD +A EI ++ G P ++TY + GLC+ G
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 254 VD---VAHKLVR--KLHCKLH----PLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRT 304
++ VA K+ L C L N + +I GFC++G EA + +MK
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 305 FPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNY 346
PD +YN L+ A + GD C+ Y
Sbjct: 127 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 168
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 70/173 (40%), Gaps = 8/173 (4%)
Query: 402 LTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISG 461
+ L + ++G+ N +Y +I + + MA E+ M+ V P ++ Y+ L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 462 FAKE--------QSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE 513
K E LF L G+ N TYTT+IS + + +AY F +
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 514 MIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLID 566
M + PD +Y LI + + L +EM + TY + D
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 13/132 (9%)
Query: 198 LMETGPLPNIHTYTIMMS--CGDIRL-AAEILGKIYRS----------GGNPTVVTYGTY 244
++ G P+I TY I++ C + +L A + GK+ G P VVTY T
Sbjct: 42 MVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 101
Query: 245 IRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRT 304
I G C+ G+ + A+ L RK+ +S +N +I + G + E+++EM+S R
Sbjct: 102 ISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRF 161
Query: 305 FPDVYSYNMLLN 316
D +Y ++ +
Sbjct: 162 AGDASTYGLVTD 173
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 78/173 (45%), Gaps = 11/173 (6%)
Query: 367 LEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHM 426
+E++ M Q + NT+ +++ + G A + ++ G+ + +YN ++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 427 ICKESYPKMAL---------ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFT 477
+CK + AL +L + + V P VV Y+T+ISGF K+ E LF
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFK-EEAYTLFR 119
Query: 478 RLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALI 530
++ + G ++ TY TLI H R + + EM +SC + S L+
Sbjct: 120 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM-RSCRFAGDASTYGLV 171
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 106/498 (21%), Positives = 206/498 (41%), Gaps = 44/498 (8%)
Query: 132 LPHHSVLVFNVLIKVFASNSMLEHAHQVF----VSAKNVGLELHIRSCNFL--LKCLXXX 185
+P V+ N L+ + N E A ++F SA + L +++C L LKC
Sbjct: 150 MPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQI 209
Query: 186 XXXXXXXXXXXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYI 245
L N++ CGD+R+A+ +L +I P + I
Sbjct: 210 HAQILIGGVECDSKMNSSLVNVYA-----KCGDLRMASYMLEQIRE----PDDHSLSALI 260
Query: 246 RGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF 305
G CG V+ + L + + L +N++I G+ EAL + EM++ T
Sbjct: 261 SGYANCGRVNESRGLFDRKSNRCVIL----WNSMISGYIANNMKMEALVLFNEMRN-ETR 315
Query: 306 PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL---CKNKLKGQQL 362
D + ++NA G + + IV ++L+ + C + ++ +L
Sbjct: 316 EDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
Query: 363 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 422
+ + +E Y+ TI+ N +++V+ G+ +A + E + + S+N
Sbjct: 376 FSE-VESYD----------TILLNSMIKVYFSCGRIDDAKRVFERIENKSL----ISWNS 420
Query: 423 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKA 482
+ + + LE +M K ++ V+ S++IS A S+ E+ E++F R
Sbjct: 421 MTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACAS-ISSLELGEQVFARATIV 479
Query: 483 GITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVA 542
G+ + ++LI ++ + F M++S DEV + ++I+ + + A
Sbjct: 480 GLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKS----DEVPWNSMISGYATNGQGFEA 535
Query: 543 CALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK-RKGIFPDVVTYTVLIA 601
LF++MS G P T+ ++ ++ +LF+ MK G PD ++ ++
Sbjct: 536 IDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVD 595
Query: 602 WYHKHGRIGEKNKLFGEM 619
+ G + E L EM
Sbjct: 596 LLARAGYVEEAINLVEEM 613
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 14/188 (7%)
Query: 409 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN 468
E ++++ YN IIH +CK A + +L + P V Y+ +I S+
Sbjct: 6 RESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI-----RFSS 60
Query: 469 FEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTA 528
E+L+ +++ G+ +T TY ++I HG ++ A R ++ +SC ++
Sbjct: 61 LGRAEKLYAEMIRRGLVPDTITYNSMI--HGLCKQNKLAQAR--KVSKSC-----STFNT 111
Query: 529 LIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKG 588
LI +C + LF EM R G + N+ TYT LI GF ++ + A +F EM G
Sbjct: 112 LINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNG 171
Query: 589 IFPDVVTY 596
++ +T+
Sbjct: 172 VYSSSITF 179
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 18/184 (9%)
Query: 443 MLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI--SIHGR 500
M + N+ Y+ +I G K F+ +FT L+ +G+ + +TY +I S GR
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKA-GKFDEAGNIFTNLLISGLQPDVQTYNMMIRFSSLGR 63
Query: 501 TRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYT 560
K + EMI+ L PD ++Y ++I C ++ A + + S T
Sbjct: 64 AEKL------YAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCS---------T 108
Query: 561 YTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
+ LI+G+CK + LF EM R+GI +V+TYT LI + + G +F EM
Sbjct: 109 FNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMV 168
Query: 621 ANCI 624
+N +
Sbjct: 169 SNGV 172
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 99/225 (44%), Gaps = 53/225 (23%)
Query: 271 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 330
+++ +N +IHG C+ G +EA + + S PDV +YNM+
Sbjct: 12 MDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMM---------------- 55
Query: 331 XXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 390
+ ++SL ++ ++Y M++ + P+TI N ++
Sbjct: 56 -------------IRFSSL--------------GRAEKLYAEMIRRGLVPDTITYNSMIH 88
Query: 391 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 450
C++ + +A + ++ + ++N +I+ CK + K + L M +R ++
Sbjct: 89 GLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVA 139
Query: 451 GVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
V+ Y+TLI GF ++ +F +F +V G+ ++ T+ ++
Sbjct: 140 NVITYTTLIHGF-RQVGDFNTALDIFQEMVSNGVYSSSITFRDIL 183
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 94/202 (46%), Gaps = 16/202 (7%)
Query: 369 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 428
++ M ++ + +T N I+ C+ G+F EA + + G+ + +YN M+
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYN----MMI 56
Query: 429 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKA-GITFN 487
+ S A +L M++R ++P + Y+++I G K+ +L +A ++ +
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQN-----------KLAQARKVSKS 105
Query: 488 TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQ 547
T+ TLI+ + + + F EM + + + ++YT LI F + + N A +FQ
Sbjct: 106 CSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQ 165
Query: 548 EMSRIGCLPNLYTYTCLIDGFC 569
EM G + T+ ++ C
Sbjct: 166 EMVSNGVYSSSITFRDILPQLC 187
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 66/153 (43%), Gaps = 26/153 (16%)
Query: 198 LMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 257
L+ +G P++ TY +M+ + A ++ ++ R G P +TY + I GLC+ + A
Sbjct: 40 LLISGLQPDVQTYNMMIRFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA 99
Query: 258 HKLVRKLHCKLHPLNSHC--------------------------FNAVIHGFCQRGAVNE 291
K+ + +N +C + +IHGF Q G N
Sbjct: 100 RKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNT 159
Query: 292 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDV 324
AL++ +EM S+ + ++ +L C + ++
Sbjct: 160 ALDIFQEMVSNGVYSSSITFRDILPQLCSRKEL 192
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 110/225 (48%), Gaps = 6/225 (2%)
Query: 362 LYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ-GINLNQYSY 420
+++ + +V+ M + + + N +L + +F L + + I + SY
Sbjct: 124 MFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSY 183
Query: 421 NEIIHMIC-KESYPKMALELMPRMLKRNVLPGVVNYSTLI-SGFAKEQSNFEMVERLFTR 478
N +I +C K+S P+ A+ L+ + + + P +V ++TL+ S + K Q FE+ E ++ +
Sbjct: 184 NTLIKALCEKDSLPE-AVALLDEIENKGLKPDIVTFNTLLLSSYLKGQ--FELGEEIWAK 240
Query: 479 LVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIRE 538
+V+ + + +TY + K + FGE+ S L PD S+ A+I N +
Sbjct: 241 MVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEGK 300
Query: 539 MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE 583
M+ A A ++E+ + G P+ T+ L+ CK + A +LF E
Sbjct: 301 MDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKE 345
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/336 (20%), Positives = 131/336 (38%), Gaps = 45/336 (13%)
Query: 238 VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNA-VIHGFCQRGAVNEALEVL 296
+ Y +R L + +++ + K ++ F A +I + + G A +V
Sbjct: 74 IAVYDRTVRRLVAAKRLHYVEEILEE-QKKYRDMSKEGFAARIISLYGKAGMFENAQKVF 132
Query: 297 EEMKSSRTFPDVYSYNMLLNAF--CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 354
EEM + V S+N LL+A+ KK DV IKP IV+Y +LI
Sbjct: 133 EEMPNRDCKRSVLSFNALLSAYRLSKKFDV-VEELFNELPGKLSIKPDIVSYNTLI---- 187
Query: 355 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 414
+ C + EA+ LL++ +G+
Sbjct: 188 -----------------------------------KALCEKDSLPEAVALLDEIENKGLK 212
Query: 415 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVER 474
+ ++N ++ + ++ E+ +M+++NV + Y+ + G A E + E+V
Sbjct: 213 PDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELV-N 271
Query: 475 LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFC 534
LF L +G+ + ++ +I K +A + E+++ PD+ ++ L+ C
Sbjct: 272 LFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMC 331
Query: 535 NIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
+ A LF+E L T L+D K
Sbjct: 332 KAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVK 367
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 68/135 (50%), Gaps = 1/135 (0%)
Query: 494 LISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM-SRI 552
+IS++G+ A F EM +S+ AL++ + ++ +V LF E+ ++
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKL 174
Query: 553 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 612
P++ +Y LI C+ D + A L DE++ KG+ PD+VT+ L+ + G+
Sbjct: 175 SIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELG 234
Query: 613 NKLFGEMKANCILLD 627
+++ +M + +D
Sbjct: 235 EEIWAKMVEKNVAID 249
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 95/220 (43%), Gaps = 5/220 (2%)
Query: 255 DVAHKLVRKLHCKLH-PLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
DV +L +L KL + +N +I C++ ++ EA+ +L+E+++ PD+ ++N
Sbjct: 161 DVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNT 220
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
LL + KG + I Y + +L N+ K ++L + ++ +
Sbjct: 221 LLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVN----LFGEL 276
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
+ ++P+ N ++R EG+ EA ++ + G ++ ++ ++ +CK
Sbjct: 277 KASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDF 336
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 473
+ A+EL + L G L+ K E E
Sbjct: 337 ESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEE 376
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 85/205 (41%), Gaps = 4/205 (1%)
Query: 236 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 295
P +V+Y T I+ LCE + A L+ ++ K + FN ++ +G E+
Sbjct: 178 PDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEI 237
Query: 296 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 355
+M D+ +YN L + +KP + ++ ++I N
Sbjct: 238 WAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSIN 297
Query: 356 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 415
+ K D++ Y ++++ RP+ +L C+ G F A+ L ++ + +
Sbjct: 298 EGK----MDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLV 353
Query: 416 NQYSYNEIIHMICKESYPKMALELM 440
Q + +++ + K S + A E++
Sbjct: 354 GQTTLQQLVDELVKGSKREEAEEIV 378
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 115/271 (42%), Gaps = 8/271 (2%)
Query: 285 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 344
Q +EAL VL + D +YN+++ F KGD+ + P ++
Sbjct: 142 QANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVI 201
Query: 345 NYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 404
YTS+I N D + + M ++ N++ + IL C+ G AL L
Sbjct: 202 TYTSMI----NGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALEL 257
Query: 405 LEDFHEQG----INLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 460
L + ++ I+ N +Y +I C++ + AL ++ RM R +P V LI
Sbjct: 258 LAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQ 317
Query: 461 GFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLC 520
G + + + + +L +LVK G ++ +++ R ++ +A F M+ +
Sbjct: 318 GVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVR 377
Query: 521 PDEVSYTALIAVFCNIREMNVACALFQEMSR 551
PD ++ + + C + L+QE+ +
Sbjct: 378 PDGLACSHVFRELCLLERYLDCFLLYQEIEK 408
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 123/289 (42%), Gaps = 44/289 (15%)
Query: 217 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 276
GD+ +A ++ ++ G P V+TY + I G C G +D A +L +++ LNS +
Sbjct: 179 GDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTY 238
Query: 277 NAVIHGFCQRGAVNEALEVLEEMKSSR----TFPDVYSYNMLLNAFCKKGDVXXXXXXXX 332
+ ++ G C+ G + ALE+L EM+ P+ +Y +++ AFC+K V
Sbjct: 239 SRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLD 298
Query: 333 XXXXCQIKPSIVNYTSLI---------------LLCK-NKLKGQQL-------------- 362
P+ V LI L+ K KL G L
Sbjct: 299 RMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRM 358
Query: 363 --YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSY 420
++++ +++ ML +RP+ + C+H+ R C ++ + L ++ ++ + + +
Sbjct: 359 KRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDV---KSTI 415
Query: 421 NEIIHMI-----CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 464
+ IH + C++ A +L ML + + V + +I K
Sbjct: 416 DSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKK 464
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 88/194 (45%), Gaps = 6/194 (3%)
Query: 400 EALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLI 459
EAL +L F E + + +YN +I + + +A L+ M + P V+ Y+++I
Sbjct: 148 EALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMI 207
Query: 460 SGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQ--- 516
+G+ + RL + K N+ TY+ ++ ++ +A EM +
Sbjct: 208 NGYCN-AGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDG 266
Query: 517 -SCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY-I 574
+ P+ V+YT +I FC R + A + M GC+PN T LI G + D +
Sbjct: 267 GGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDV 326
Query: 575 DLATQLFDEMKRKG 588
++L D++ + G
Sbjct: 327 KALSKLIDKLVKLG 340
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 69/134 (51%)
Query: 487 NTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALF 546
N KT ++++ + +A + + +C D V+Y +I +F + ++N+A L
Sbjct: 129 NVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLI 188
Query: 547 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 606
+EM +G P++ TYT +I+G+C ID A +L EM + + VTY+ ++ K
Sbjct: 189 KEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKS 248
Query: 607 GRIGEKNKLFGEMK 620
G + +L EM+
Sbjct: 249 GDMERALELLAEME 262
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 4/129 (3%)
Query: 487 NTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALF 546
+T Y +I + + A EM L PD ++YT++I +CN +++ A L
Sbjct: 164 DTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLA 223
Query: 547 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKG----IFPDVVTYTVLIAW 602
+EMS+ C+ N TY+ +++G CK ++ A +L EM+++ I P+ VTYT++I
Sbjct: 224 KEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQA 283
Query: 603 YHKHGRIGE 611
+ + R+ E
Sbjct: 284 FCEKRRVEE 292
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 5/201 (2%)
Query: 404 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 463
++E + ++ +N + ++ + + + AL ++ + + NV V Y+ +I FA
Sbjct: 117 VIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFA 176
Query: 464 KEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDE 523
++ + + + L + G+ + TYT++I+ + K A+ EM + +
Sbjct: 177 -DKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNS 235
Query: 524 VSYTALIAVFCNIREMNVACALFQEMSRI--GCL--PNLYTYTCLIDGFCKIDYIDLATQ 579
V+Y+ ++ C +M A L EM + G L PN TYT +I FC+ ++ A
Sbjct: 236 VTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALL 295
Query: 580 LFDEMKRKGIFPDVVTYTVLI 600
+ D M +G P+ VT VLI
Sbjct: 296 VLDRMGNRGCMPNRVTACVLI 316
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/429 (20%), Positives = 160/429 (37%), Gaps = 72/429 (16%)
Query: 213 MMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLC--------------------ECG 252
M+S G I G ++ + YG+ I GLC CG
Sbjct: 260 MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCG 319
Query: 253 YVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 312
+++ A R++ ++ ++ +N +I G G +EA+ V +M+SS PD S
Sbjct: 320 FLNSA----RRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLR 375
Query: 313 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNS 372
LL A Q KP ++ + +++++
Sbjct: 376 SLLCA--------------------QTKPMALS-------------------QGMQIHSY 396
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
+++ + +CN +L ++ L EDF N + S+N I+ +
Sbjct: 397 IIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRN---NADSVSWNTILTACLQHEQ 453
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
P L L ML P + L+ G E S+ ++ ++ +K G+
Sbjct: 454 PVEMLRLFKLMLVSECEPDHITMGNLLRGCV-EISSLKLGSQVHCYSLKTGLAPEQFIKN 512
Query: 493 TLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI 552
LI ++ + +A F M D VS++ LI + A LF+EM
Sbjct: 513 GLIDMYAKCGSLGQARRIFDSMDNR----DVVSWSTLIVGYAQSGFGEEALILFKEMKSA 568
Query: 553 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK-GIFPDVVTYTVLIAWYHKHGRIGE 611
G PN T+ ++ + ++ +L+ M+ + GI P + ++ + GR+ E
Sbjct: 569 GIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNE 628
Query: 612 KNKLFGEMK 620
+ EMK
Sbjct: 629 AERFIDEMK 637
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/324 (20%), Positives = 135/324 (41%), Gaps = 65/324 (20%)
Query: 346 YTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLL 405
Y SLI C + Q ++++ +L + + +TI+ NHIL ++ + G R+A +
Sbjct: 70 YISLICACSSSRSLAQ----GRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVF 125
Query: 406 EDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKE 465
+ E+ N SY +I + A+ L +ML+ +++P + ++I A
Sbjct: 126 DFMPER----NLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACAS- 180
Query: 466 QSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLC----- 520
S+ + ++L +++K + + LI++ Y RF +M +
Sbjct: 181 SSDVGLGKQLHAQVIKLESSSHLIAQNALIAM----------YVRFNQMSDASRVFYGIP 230
Query: 521 -PDEVSYTALIAVFCNIREMNVACALFQEMSRIGCL-PNLY---------------TYTC 563
D +S++++IA F + A + +EM G PN Y Y
Sbjct: 231 MKDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGS 290
Query: 564 LIDGFC--------------------KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWY 603
I G C + +++ A ++FD+++R PD ++ V+IA
Sbjct: 291 QIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIER----PDTASWNVIIAGL 346
Query: 604 HKHGRIGEKNKLFGEMKANCILLD 627
+G E +F +M+++ + D
Sbjct: 347 ANNGYADEAVSVFSQMRSSGFIPD 370
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 121/264 (45%), Gaps = 4/264 (1%)
Query: 364 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREAL-TLLEDFHEQGINLNQYSYNE 422
++++EV+ + P+ N +L V R+ Q E + +L G+ L + ++
Sbjct: 125 EEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGI 184
Query: 423 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK--EQSNFEMVERLFTRLV 480
+I +C+ A EL+ M + +V+ YS L+S K + S F+++ L L
Sbjct: 185 LIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYL-EDLR 243
Query: 481 KAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMN 540
K + + YT ++ + + +M + PD V YT ++ +
Sbjct: 244 KTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYP 303
Query: 541 VACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
A LF E+ +G P++YTY I+G CK + I+ A ++ M + G P+VVTY +LI
Sbjct: 304 KADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILI 363
Query: 601 AWYHKHGRIGEKNKLFGEMKANCI 624
K G + L+ EM+ N +
Sbjct: 364 KALVKAGDLSRAKTLWKEMETNGV 387
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 93/243 (38%), Gaps = 41/243 (16%)
Query: 219 IRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVR-----------KLHCK 267
+ L EIL K R G T+G I LC G VD A +LVR +L+ +
Sbjct: 160 LELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSR 219
Query: 268 LHPL-----NSHCFNA---------------------VIHGFCQRGAVNEALEVLEEMKS 301
L +S CF+ V+ + G E + VL +MK
Sbjct: 220 LLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKC 279
Query: 302 SRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQ 361
R PD+ Y ++L D + P + Y I N L Q
Sbjct: 280 DRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYI----NGLCKQN 335
Query: 362 LYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYN 421
+ +L++ +SM + PN + N +++ + G A TL ++ G+N N ++++
Sbjct: 336 DIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFD 395
Query: 422 EII 424
+I
Sbjct: 396 IMI 398
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 131/330 (39%), Gaps = 41/330 (12%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
F VI + G + EA+EV ++ + R P Y+ N LL +K
Sbjct: 111 FRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRK------------RQ 158
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
++ P I L+ C+ G +L + + + ++ CR
Sbjct: 159 SLELVPEI-----LVKACR---MGVRLEESTFGI------------------LIDALCRI 192
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICK--ESYPKMALELMPRMLKRNVLPGVV 453
G+ A L+ + + ++ Y+ ++ +CK +S + + + K PG+
Sbjct: 193 GEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLR 252
Query: 454 NYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE 513
+Y T++ F E + V + ++ + + YT ++ KA F E
Sbjct: 253 DY-TVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKADKLFDE 311
Query: 514 MIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 573
++ L PD +Y I C ++ A + M+++G PN+ TY LI K
Sbjct: 312 LLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGD 371
Query: 574 IDLATQLFDEMKRKGIFPDVVTYTVLIAWY 603
+ A L+ EM+ G+ + T+ ++I+ Y
Sbjct: 372 LSRAKTLWKEMETNGVNRNSHTFDIMISAY 401
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/400 (19%), Positives = 149/400 (37%), Gaps = 38/400 (9%)
Query: 76 SWVETHGFSHSVNYFRIIIHTFAMAGM---------HLEVF-------ALLRDIVGYCKC 119
S + H + +R +I T A + HLEV ++ RD++
Sbjct: 61 SSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGF 120
Query: 120 DDSFEQ-FSTLLDLPHH----SVLVFNVLIKVFASNSM-LEHAHQVFVSAKNVGLELHIR 173
E+ +P+ S N L+ V LE ++ V A +G+ L
Sbjct: 121 SGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEES 180
Query: 174 SCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS---------CGDIRLAAE 224
+ L+ L + + + + Y+ ++S C D+ E
Sbjct: 181 TFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLE 240
Query: 225 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 284
L K S P + Y +R L E G ++ ++ C + C+ V+ G
Sbjct: 241 DLRKTRFS---PGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVI 297
Query: 285 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 344
+A ++ +E+ PDVY+YN+ +N CK+ D+ +P++V
Sbjct: 298 ADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVV 357
Query: 345 NYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 404
Y LI K +K L ++ ++ M N + N+ + ++ + + A L
Sbjct: 358 TYNILI---KALVKAGDL-SRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGL 413
Query: 405 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRML 444
LE+ + + E+I +C++ A+EL+ ++
Sbjct: 414 LEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/410 (21%), Positives = 166/410 (40%), Gaps = 45/410 (10%)
Query: 232 SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC---QRGA 288
+G N + +I G++ A+ + C N++ N +I + A
Sbjct: 41 TGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCP----NTYLHNTMIRALSLLDEPNA 96
Query: 289 VNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTS 348
+ A+ V ++ + PD +++ +L + DV S+ T
Sbjct: 97 HSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTG 156
Query: 349 LILL---CKNKLKGQQLYD----KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREA 401
LI + C ++++D K + V+N++L + + G+ EA
Sbjct: 157 LIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAG---------------YGKVGEMDEA 201
Query: 402 LTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISG 461
+LLE N+ S+ +I K A+E+ RML NV P V ++S
Sbjct: 202 RSLLEMM--PCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSA 259
Query: 462 FAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCP 521
A + + E+ ER+ + + G+ +I ++ ++ KA F C
Sbjct: 260 CA-DLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFE-------CV 311
Query: 522 DE---VSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLAT 578
+E V++T +IA A A+F M + G PN T+ ++ + ++DL
Sbjct: 312 NERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGK 371
Query: 579 QLFDEMKRK-GIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM--KANCIL 625
+LF+ M+ K GI P++ Y +I + G++ E +++ M KAN +
Sbjct: 372 RLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAI 421
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 103/495 (20%), Positives = 207/495 (41%), Gaps = 39/495 (7%)
Query: 86 SVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFE----QFSTLLDLPHHSVLVFN 141
++ RII G+H +AL + ++ +C FE S + ++L++N
Sbjct: 45 TLQSLRIIHAQMIKIGLHNTNYALSK-LIEFCILSPHFEGLPYAISVFKTIQEPNLLIWN 103
Query: 142 VLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMET 201
+ + A +S A +++V ++GL + + F+LK +++
Sbjct: 104 TMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKL 163
Query: 202 GPLPN--IHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHK 259
G + +HT I M + RL E K++ + VV+Y I+G GY++ A K
Sbjct: 164 GCDLDLYVHTSLISMYVQNGRL--EDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221
Query: 260 LVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 319
L ++ K + +NA+I G+ + G EALE+ ++M + PD + +++A
Sbjct: 222 LFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277
Query: 320 KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDK--SLEVYNSMLQNA 377
+ G + ++ +LI LY K LE + +
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALI----------DLYSKCGELETACGLFERL 327
Query: 378 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 437
+ I N ++ + ++EAL L ++ G N + I+ +
Sbjct: 328 PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR 387
Query: 438 ELMPRMLKRNVLPGVVNYS----TLISGFAKEQSNFEMVERLFTRLV-KAGITFNTKTYT 492
+ + KR L GV N S +LI +AK + E ++F ++ K+ ++N +
Sbjct: 388 WIHVYIDKR--LKGVTNASSLRTSLIDMYAK-CGDIEAAHQVFNSILHKSLSSWNAMIFG 444
Query: 493 TLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR- 551
++HGR ++ F M + + PD++++ L++ + +++ +F+ M++
Sbjct: 445 --FAMHGRAD---ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQD 499
Query: 552 IGCLPNLYTYTCLID 566
P L Y C+ID
Sbjct: 500 YKMTPKLEHYGCMID 514
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/421 (18%), Positives = 166/421 (39%), Gaps = 84/421 (19%)
Query: 198 LMETGPLPNIHTYT-IMMSCGD---IRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
++ G LPN +T+ ++ SC + +I G + + G + + + + I + G
Sbjct: 125 MISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGR 184
Query: 254 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 313
++ AHK+ K + + + A+I G+ RG + A ++ +E+ DV S+N
Sbjct: 185 LEDAHKVFDKSPHR----DVVSYTALIKGYASRGYIENAQKLFDEIP----VKDVVSWNA 236
Query: 314 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 373
+++ + + G+ Y ++LE++ M
Sbjct: 237 MISGYAETGN---------------------------------------YKEALELFKDM 257
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
++ +RP+ ++ + G + + G N N +I + K
Sbjct: 258 MKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGEL 317
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTT 493
+ A L R+ ++V ++++TLI G+ + ++ LF ++++G T N T +
Sbjct: 318 ETACGLFERLPYKDV----ISWNTLIGGYT-HMNLYKEALLLFQEMLRSGETPNDVTMLS 372
Query: 494 LIS-------------IHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMN 540
++ IH KR K + T+LI ++ ++
Sbjct: 373 ILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSL-----------RTSLIDMYAKCGDIE 421
Query: 541 VACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 600
A +F + +L ++ +I GF D + LF M++ GI PD +T+ L+
Sbjct: 422 AAHQVFNSILH----KSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLL 477
Query: 601 A 601
+
Sbjct: 478 S 478
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 85/179 (47%), Gaps = 9/179 (5%)
Query: 450 PGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYC 509
P ++ ++T+ G A + +L+ ++ G+ N+ T+ ++ +++ +
Sbjct: 97 PNLLIWNTMFRGHALSSDPVSAL-KLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQ 155
Query: 510 RFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 569
G +++ D +T+LI+++ + A +F + ++ +YT LI G+
Sbjct: 156 IHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPH----RDVVSYTALIKGYA 211
Query: 570 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 628
YI+ A +LFDE+ K DVV++ +I+ Y + G E +LF +M + D+
Sbjct: 212 SRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDE 266
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/503 (18%), Positives = 208/503 (41%), Gaps = 100/503 (19%)
Query: 113 IVGYCKCDDSFEQFSTLLD-LPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELH 171
I GY + + FE L D +P ++ +NV+IK + N L A ++F + E
Sbjct: 102 ISGYLR-NGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELF----EIMPERD 156
Query: 172 IRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYR 231
+ S N +L + + P N ++ ++S E +++
Sbjct: 157 VCSWNTMLSGY----AQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFK 212
Query: 232 SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 291
S N +V++ + G + + A + ++ + + +N +I G+ Q G ++E
Sbjct: 213 SRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDE 268
Query: 292 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL 351
A ++ +E DV+++ +++ + I+ +V
Sbjct: 269 ARQLFDE----SPVQDVFTWTAMVSGY--------------------IQNRMVE------ 298
Query: 352 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 411
+ ++L+DK E +N + N ++ ++ +G E + + ++ +
Sbjct: 299 ------EARELFDKMPE------RNEVSWNAMLAGYV------QG---ERMEMAKELFDV 337
Query: 412 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEM 471
N ++N +I + A L +M KR+ V+++ +I+G+++ +FE
Sbjct: 338 MPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRD----PVSWAAMIAGYSQSGHSFEA 393
Query: 472 VERLFTRLVKAGITFNTKTYTTLIS-------------IHGRTRKRHKAYCRFGEMIQSC 518
+ RLF ++ + G N ++++ +S +HGR K G C
Sbjct: 394 L-RLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVK--------GGYETGC 444
Query: 519 LCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLAT 578
+ AL+ ++C + A LF+EM+ ++ ++ +I G+ + + ++A
Sbjct: 445 FVGN-----ALLLMYCKCGSIEEANDLFKEMAG----KDIVSWNTMIAGYSRHGFGEVAL 495
Query: 579 QLFDEMKRKGIFPDVVTYTVLIA 601
+ F+ MKR+G+ PD T +++
Sbjct: 496 RFFESMKREGLKPDDATMVAVLS 518
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 123/288 (42%), Gaps = 46/288 (15%)
Query: 337 CQIKPSIVNYTSLILLCKNKLKGQQLY------DKSLEVYNSMLQNAIRPNTIICNHILR 390
C N+ SL + +++ Q D ++ +N + + +R T CN LR
Sbjct: 28 CNNAHGAANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMR--TGRCNEALR 85
Query: 391 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 450
V R ++ + SYN +I + ++A +L M +R++
Sbjct: 86 VFKRMPRW-----------------SSVSYNGMISGYLRNGEFELARKLFDEMPERDL-- 126
Query: 451 GVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCR 510
V+++ +I G+ + + N LF + + + ++ T++S + + A
Sbjct: 127 --VSWNVMIKGYVRNR-NLGKARELFEIMPERDVC----SWNTMLSGYAQNGCVDDARSV 179
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
F M + ++VS+ AL++ + +M AC LF+ L ++ CL+ GF K
Sbjct: 180 FDRMPEK----NDVSWNALLSAYVQNSKMEEACMLFKSRENWA----LVSWNCLLGGFVK 231
Query: 571 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE 618
I A Q FD M + DVV++ +I Y + G+I E +LF E
Sbjct: 232 KKKIVEARQFFDSMNVR----DVVSWNTIITGYAQSGKIDEARQLFDE 275
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 147/378 (38%), Gaps = 63/378 (16%)
Query: 239 VTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSH--CFNAVIHGFCQRGAVNEALEVL 296
+++ T ++ + + ++ A + RK +C +NS N ++ CQ + A +V
Sbjct: 117 LSFDTLLQEMVKESELEAACHIFRK-YCYGWEVNSRITALNLLMKVLCQVNRSDLASQVF 175
Query: 297 EEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNK 356
+EM +PD SY +L+ FC +G +
Sbjct: 176 QEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHL-------------------------- 209
Query: 357 LKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLN 416
LY ++ + Q + ++ +L C G+ +A+ +L +G+
Sbjct: 210 -----LYS----MFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAP 260
Query: 417 QYSYN--EIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVER 474
+ Y+ E H + L+ L R +P + +YS + + +E E E
Sbjct: 261 KRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEV 320
Query: 475 LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFG-----------EMIQSCLCPDE 523
L + +K + I+G + KA CR G EM+Q P
Sbjct: 321 L--------LAMRSKGFEPTPFIYG---AKVKALCRAGKLKEAVSVINKEMMQGHCLPTV 369
Query: 524 VSYTALIAVFCNIREMNVACALFQEMSR-IGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 582
Y LI C+ + A ++MS+ + C+ N TY L+DG C+ A+Q+ +
Sbjct: 370 GVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVME 429
Query: 583 EMKRKGIFPDVVTYTVLI 600
EM K FP V TY ++I
Sbjct: 430 EMLIKSHFPGVETYHMMI 447
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 162/399 (40%), Gaps = 38/399 (9%)
Query: 90 FRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFAS 149
F +I TF+ AG + +L + S +F+ + + L F+ L++
Sbjct: 84 FASVIRTFSRAGRLEDAISLFK----------SLHEFNCV-----NWSLSFDTLLQEMVK 128
Query: 150 NSMLEHAHQVFVSAKNVGLELHIR--SCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNI 207
S LE A +F G E++ R + N L+K L + G P+
Sbjct: 129 ESELEAACHIF-RKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDR 187
Query: 208 HTYTIMMSC----GDIRLAAEIL----GKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHK 259
+Y I+M G + A +L +I + G +V Y + LC+ G VD A +
Sbjct: 188 DSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIE 247
Query: 260 LVRKLHCKLHPLNSHCFNAVIHGFCQRGA--VNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
++ K+ K C++ + G + + + +L E P + SY+ +
Sbjct: 248 ILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATD 307
Query: 318 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCK-NKLKGQQLYDKSLEVYN-SML 374
++G + +P+ Y + + LC+ KLK +++ V N M+
Sbjct: 308 LFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLK------EAVSVINKEMM 361
Query: 375 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ-GINLNQYSYNEIIHMICKESYP 433
Q P + N +++ C +G+ EA+ L+ +Q N+ +Y ++ +C++
Sbjct: 362 QGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQF 421
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV 472
A ++M ML ++ PGV Y +I G +E V
Sbjct: 422 LEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAV 460
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 529 LIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQL----FDEM 584
L+ V C + ++A +FQEM+ GC P+ +Y L+ GFC ++ AT L F +
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRI 217
Query: 585 KRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
+KG D+V Y +L+ G + + ++ G++
Sbjct: 218 SQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKI 252
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 147/378 (38%), Gaps = 63/378 (16%)
Query: 239 VTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSH--CFNAVIHGFCQRGAVNEALEVL 296
+++ T ++ + + ++ A + RK +C +NS N ++ CQ + A +V
Sbjct: 117 LSFDTLLQEMVKESELEAACHIFRK-YCYGWEVNSRITALNLLMKVLCQVNRSDLASQVF 175
Query: 297 EEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNK 356
+EM +PD SY +L+ FC +G +
Sbjct: 176 QEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHL-------------------------- 209
Query: 357 LKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLN 416
LY ++ + Q + ++ +L C G+ +A+ +L +G+
Sbjct: 210 -----LYS----MFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAP 260
Query: 417 QYSYN--EIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVER 474
+ Y+ E H + L+ L R +P + +YS + + +E E E
Sbjct: 261 KRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEV 320
Query: 475 LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFG-----------EMIQSCLCPDE 523
L + +K + I+G + KA CR G EM+Q P
Sbjct: 321 L--------LAMRSKGFEPTPFIYG---AKVKALCRAGKLKEAVSVINKEMMQGHCLPTV 369
Query: 524 VSYTALIAVFCNIREMNVACALFQEMSR-IGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 582
Y LI C+ + A ++MS+ + C+ N TY L+DG C+ A+Q+ +
Sbjct: 370 GVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVME 429
Query: 583 EMKRKGIFPDVVTYTVLI 600
EM K FP V TY ++I
Sbjct: 430 EMLIKSHFPGVETYHMMI 447
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 162/399 (40%), Gaps = 38/399 (9%)
Query: 90 FRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFAS 149
F +I TF+ AG + +L + S +F+ + + L F+ L++
Sbjct: 84 FASVIRTFSRAGRLEDAISLFK----------SLHEFNCV-----NWSLSFDTLLQEMVK 128
Query: 150 NSMLEHAHQVFVSAKNVGLELHIR--SCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNI 207
S LE A +F G E++ R + N L+K L + G P+
Sbjct: 129 ESELEAACHIF-RKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDR 187
Query: 208 HTYTIMMSC----GDIRLAAEIL----GKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHK 259
+Y I+M G + A +L +I + G +V Y + LC+ G VD A +
Sbjct: 188 DSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIE 247
Query: 260 LVRKLHCKLHPLNSHCFNAVIHGFCQRGA--VNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
++ K+ K C++ + G + + + +L E P + SY+ +
Sbjct: 248 ILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATD 307
Query: 318 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCK-NKLKGQQLYDKSLEVYN-SML 374
++G + +P+ Y + + LC+ KLK +++ V N M+
Sbjct: 308 LFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLK------EAVSVINKEMM 361
Query: 375 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ-GINLNQYSYNEIIHMICKESYP 433
Q P + N +++ C +G+ EA+ L+ +Q N+ +Y ++ +C++
Sbjct: 362 QGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQF 421
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV 472
A ++M ML ++ PGV Y +I G +E V
Sbjct: 422 LEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAV 460
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 529 LIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQL----FDEM 584
L+ V C + ++A +FQEM+ GC P+ +Y L+ GFC ++ AT L F +
Sbjct: 158 LMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRI 217
Query: 585 KRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
+KG D+V Y +L+ G + + ++ G++
Sbjct: 218 SQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKI 252
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 59/106 (55%)
Query: 514 MIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 573
M++ + P ++Y ++I FC ++ A + M+ GC P++ T++ LI+G+CK
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 574 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
+D ++F EM R+GI + VTYT LI + + G + L EM
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 106
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
Query: 443 MLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTR 502
ML+ ++ P + Y+++I GF K Q + +R+ + G + + T++TLI+ + + +
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCK-QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAK 59
Query: 503 KRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYT 562
+ F EM + + + V+YT LI FC + +++ A L EM G P+ T+
Sbjct: 60 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFH 119
Query: 563 CLIDGFCKIDYIDLATQLFDEMKR 586
C++ G C + A + +++++
Sbjct: 120 CMLAGLCSKKELRKAFAILEDLQK 143
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 204 LPNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHK 259
P TY M+ C R+ A +L + G +P VVT+ T I G C+ VD +
Sbjct: 7 FPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGME 66
Query: 260 LVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 319
+ ++H + N+ + +IHGFCQ G ++ A ++L EM S PD +++ +L C
Sbjct: 67 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Query: 320 KK 321
K
Sbjct: 127 SK 128
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
+N++I GFC++ V++A +L+ M S PDV +++ L+N +CK V
Sbjct: 13 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 72
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
I + V YT+LI + D + ++ N M+ + P+ I + +L C +
Sbjct: 73 RRGIVANTVTYTTLI----HGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 128
Query: 396 GQFREALTLLEDFHEQ 411
+ R+A +LED +
Sbjct: 129 KELRKAFAILEDLQKS 144
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Query: 236 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 295
PT +TY + I G C+ VD A +++ + K + F+ +I+G+C+ V+ +E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 296 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCK 354
EM + +Y L++ FC+ GD+ C + P + + ++ LC
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 355 NK 356
K
Sbjct: 128 KK 129
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/145 (20%), Positives = 72/145 (49%), Gaps = 1/145 (0%)
Query: 373 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 432
ML+ +I P TI N ++ C++ + +A +L+ +G + + +++ +I+ CK
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
+E+ M +R ++ V Y+TLI GF + + + + L ++ G+ + T+
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFC-QVGDLDAAQDLLNEMISCGVAPDYITFH 119
Query: 493 TLISIHGRTRKRHKAYCRFGEMIQS 517
+++ ++ KA+ ++ +S
Sbjct: 120 CMLAGLCSKKELRKAFAILEDLQKS 144
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 120/264 (45%), Gaps = 22/264 (8%)
Query: 342 SIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREA 401
++V +T+LI + + D+ L ++ M +PN+ L V EG
Sbjct: 158 NVVTWTTLI----SGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRG 213
Query: 402 LTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISG 461
L + + G++ N +I++ K + A L + + VV ++++ISG
Sbjct: 214 LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARIL----FDKTEVKSVVTWNSMISG 269
Query: 462 FAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCP 521
+A + E + ++ + + + ++ ++I + ++ RF E + +
Sbjct: 270 YAANGLDLEALGMFYSMRLNY-VRLSESSFASVIKLCANLKE-----LRFTEQLHCSVVK 323
Query: 522 -----DEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDL 576
D+ TAL+ + M A LF+E IGC+ N+ ++T +I GF + D +
Sbjct: 324 YGFLFDQNIRTALMVAYSKCTAMLDALRLFKE---IGCVGNVVSWTAMISGFLQNDGKEE 380
Query: 577 ATQLFDEMKRKGIFPDVVTYTVLI 600
A LF EMKRKG+ P+ TY+V++
Sbjct: 381 AVDLFSEMKRKGVRPNEFTYSVIL 404
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 91/456 (19%), Positives = 184/456 (40%), Gaps = 98/456 (21%)
Query: 262 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 321
RK+ ++ N + +I G+ + +E L + M++ T P+ +++ L ++
Sbjct: 148 RKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEE 207
Query: 322 G------DVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDK----SLEVYN 371
G V + S++N L L C N K + L+DK S+ +N
Sbjct: 208 GVGGRGLQVHTVVVKNGLDKTIPVSNSLIN---LYLKCGNVRKARILFDKTEVKSVVTWN 264
Query: 372 SMLQ----NAIRPNTIICNHILR---VHCREGQFREALTLLED-----FHEQ---GINLN 416
SM+ N + + + +R V E F + L + F EQ +
Sbjct: 265 SMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKY 324
Query: 417 QYSYNEIIHMICKESYPK-MALELMPRMLKR-NVLPGVVNYSTLISGFAKEQSNFEMVER 474
+ +++ I +Y K A+ R+ K + VV+++ +ISGF + E V+
Sbjct: 325 GFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVD- 383
Query: 475 LFTRLVKAGITFNTKTYTTLIS---------IHGRTRKRH------------KAYCRFGE 513
LF+ + + G+ N TY+ +++ +H + K + AY + G+
Sbjct: 384 LFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGK 443
Query: 514 MIQSCLC------PDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLID- 566
+ ++ D V+++A++A + E A +F E+++ G PN +T++ +++
Sbjct: 444 VEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNV 503
Query: 567 ---------------GF--------------------CKIDYIDLATQLFDEMKRKGIFP 591
GF K I+ A ++F + K
Sbjct: 504 CAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK---- 559
Query: 592 DVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
D+V++ +I+ Y +HG+ + +F EMK + +D
Sbjct: 560 DLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMD 595
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 106/540 (19%), Positives = 213/540 (39%), Gaps = 58/540 (10%)
Query: 107 FALLRDIVGYCKCDDSFEQFSTLLD-------LPHHSVLVFNVLIKVFASNSMLEHAHQV 159
F L D+ D++ + S D + +V+ + LI +A NSM + +
Sbjct: 122 FGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTL 181
Query: 160 FVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETG-----PLPNIHTYTIMM 214
F+ +N G + + + L L +++ G P+ N + +
Sbjct: 182 FMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSN-SLINLYL 240
Query: 215 SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSH 274
CG++R A + K +VVT+ + I G G A + + L+
Sbjct: 241 KCGNVRKARILFDKTEVK----SVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSES 296
Query: 275 CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 334
F +VI C A + L E++ S V Y L + + +
Sbjct: 297 SFASVIK-LC---ANLKELRFTEQLHCS-----VVKYGFLFDQNIRTALMVAYSKCTAML 347
Query: 335 XXCQIKPSI------VNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNH 387
++ I V++T++I +N K ++++++++ M + +RPN +
Sbjct: 348 DALRLFKEIGCVGNVVSWTAMISGFLQNDGK-----EEAVDLFSEMKRKGVRPNEFTYSV 402
Query: 388 ILRVHCREGQFREALTLLE--DFHEQGINLNQYSYNEIIHMICKESYPKMA-LELMPRML 444
IL AL ++ + H Q + N Y + + ++Y K+ +E ++
Sbjct: 403 IL----------TALPVISPSEVHAQVVKTN-YERSSTVGTALLDAYVKLGKVEEAAKVF 451
Query: 445 KRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKR 504
+V +S +++G+A + E ++F L K GI N T+++++++ T
Sbjct: 452 SGIDDKDIVAWSAMLAGYA-QTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNAS 510
Query: 505 HKAYCRF-GEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTC 563
+F G I+S L +AL+ ++ + A +F+ +L ++
Sbjct: 511 MGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQRE----KDLVSWNS 566
Query: 564 LIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANC 623
+I G+ + A +F EMK++ + D VT+ + A G + E K F M +C
Sbjct: 567 MISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDC 626
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 117/283 (41%), Gaps = 55/283 (19%)
Query: 376 NAIRPNTIICNHILRVHCREGQFREALTLLEDFH---EQGINLNQYSYNEIIHMICKESY 432
N RP + N ++ ++ + LL D H +Q N S+ +I K
Sbjct: 90 NGHRPMMFLVNVLINMYVK-------FNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKI 142
Query: 433 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
+ ALEL+ ML+ NV P V YS+++ + + V L ++K G+ + +
Sbjct: 143 HQKALELLVLMLRDNVRPNVYTYSSVL----RSCNGMSDVRMLHCGIIKEGLESDVFVRS 198
Query: 493 TLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI 552
LI + + + A F EM+ D + + ++I F +VA LF+ M R
Sbjct: 199 ALIDVFAKLGEPEDALSVFDEMVTG----DAIVWNSIIGGFAQNSRSDVALELFKRMKRA 254
Query: 553 GCLPNLYTYT---------------------------------CLIDGFCKIDYIDLATQ 579
G + T T L+D +CK ++ A +
Sbjct: 255 GFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALR 314
Query: 580 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 622
+F++MK + DV+T++ +I+ ++G E KLF MK++
Sbjct: 315 VFNQMKER----DVITWSTMISGLAQNGYSQEALKLFERMKSS 353
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 165/404 (40%), Gaps = 41/404 (10%)
Query: 198 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 253
L + P N+ ++T M+S C + A E+L + R P V TY + +R C G
Sbjct: 118 LFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS-CN-GM 175
Query: 254 VDVAHKLVRKLHCKL--HPLNSHCF--NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 309
D VR LHC + L S F +A+I F + G +AL V +EM + D
Sbjct: 176 SD-----VRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTG----DAI 226
Query: 310 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEV 369
+N ++ F + TS++ C G L + ++
Sbjct: 227 VWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRAC----TGLALLELGMQA 282
Query: 370 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 429
+ +++ + I+ N ++ ++C+ G +AL + E+ + +++ +I + +
Sbjct: 283 HVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDV----ITWSTMISGLAQ 336
Query: 430 ESYPKMALELMPRMLKRNVLPGVVNYSTLISG-FAKEQSNFEMVERLFTRLVKA--GITF 486
Y + AL+L RM P NY T++ FA + + R +K GI
Sbjct: 337 NGYSQEALKLFERMKSSGTKP---NYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDP 393
Query: 487 NTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALF 546
+ Y +I + G+ K A EM C PD V++ L+ C ++ N+ A +
Sbjct: 394 VREHYGCMIDLLGKAGKLDDAVKLLNEM--ECE-PDAVTWRTLLGA-CRVQR-NMVLAEY 448
Query: 547 QEMSRIGCLP-NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 589
I P + TYT L + + D ++ M+ +GI
Sbjct: 449 AAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGI 492
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/366 (19%), Positives = 147/366 (40%), Gaps = 20/366 (5%)
Query: 277 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 336
N ++ + + + A ++ +EM S RT V+++ ++++AF K +
Sbjct: 62 NNLLSLYLKTDGIWNARKLFDEM-SHRT---VFAWTVMISAFTKSQEFASALSLFEEMMA 117
Query: 337 CQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREG 396
P+ ++S++ C G + V+ S+++ N+++ + + ++ + G
Sbjct: 118 SGTHPNEFTFSSVVRSCA----GLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCG 173
Query: 397 QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYS 456
QF+EA L N + S+ +I + + AL+ M+K V P +
Sbjct: 174 QFKEACELFSSLQ----NADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFV 229
Query: 457 TLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQ 516
L+ A E + + + ++ GI N T+L+ + + K A ++
Sbjct: 230 KLLG--ASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAV----RVLN 283
Query: 517 SCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDL 576
S D +T++++ F A F EM +G PN +TY+ ++ + +D
Sbjct: 284 SSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDF 343
Query: 577 ATQLFDEMKRKGIFPDVVTYTVLIAWYHK-HGRIGEKNKLFGEM-KANCILLDDGIKKLQ 634
Q+ + + G L+ Y K E +++FG M N + I L
Sbjct: 344 GKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLV 403
Query: 635 DPKLVQ 640
D VQ
Sbjct: 404 DHGFVQ 409
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/343 (19%), Positives = 138/343 (40%), Gaps = 33/343 (9%)
Query: 298 EMKSSRTF-----PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL 352
E+++SR F P+V S+ L+ G V +++P++V + ++
Sbjct: 377 EVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRA 436
Query: 353 CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQG 412
C +KL+ + + LE++ +L+ + ++ N ++ + + A ++ +
Sbjct: 437 C-SKLRHVR---RVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRR- 491
Query: 413 INLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV------LPGVVNYSTLISGFAKEQ 466
+ +Y ++ + +MAL ++ M + LPG ++ S +
Sbjct: 492 ---DNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGAL---- 544
Query: 467 SNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSY 526
E + L VK+G + +L+ ++ + A F E+ PD VS+
Sbjct: 545 ---ETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA----TPDVVSW 597
Query: 527 TALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 586
L++ + ++ A + F+EM P+ T+ L+ DL + F MK+
Sbjct: 598 NGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKK 657
Query: 587 -KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM--KANCILL 626
I P V Y L+ + GR+ E + M K N ++
Sbjct: 658 IYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIF 700
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 163/412 (39%), Gaps = 34/412 (8%)
Query: 70 REKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTL 129
R+ K+G+ ++ HGF + II T+ + +F D+ K + + E +
Sbjct: 142 RQAKYGALLQLHGFINQAGIAPNII-TYNL------IFQAYLDV---RKPEIALEHYKLF 191
Query: 130 LD-LP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXX 187
+D P + S+ F +L+K SN LE A ++ G + ++L+
Sbjct: 192 IDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSD 251
Query: 188 XXXXXXXXXXLMET--GPLPNIHTYTIMMSCGDIRLAAEILGKIYRS--GGNPTV----V 239
L E G + + Y +M ++ + + Y G N V +
Sbjct: 252 ADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAM 311
Query: 240 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHP-----LNSHCFNAVIHGFCQRGAVNEALE 294
Y + L E G D A KL + + +P +N FN +++G+C G EA+E
Sbjct: 312 AYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAME 371
Query: 295 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 354
V +M + PD S+N L+N C + +KP Y L+ C
Sbjct: 372 VFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCF 431
Query: 355 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 414
+ K D+ Y +M+++ +RPN + N + + G+ +A + D +
Sbjct: 432 KEGK----IDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF-DMMVSKLK 486
Query: 415 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ 466
++ +Y I+ + + L+++ ML + V S + F KE+
Sbjct: 487 MDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDD----TVRVSEELQEFVKEE 534
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/318 (19%), Positives = 133/318 (41%), Gaps = 19/318 (5%)
Query: 306 PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDK 365
P +++ N +L A ++ I P+I+ Y +LI ++ ++
Sbjct: 128 PTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPNIITY-NLIFQAYLDVRKPEI--- 183
Query: 366 SLEVYNSMLQNA-IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEII 424
+LE Y + NA + P+ +++ +A+ + ED +G ++ Y+ ++
Sbjct: 184 ALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLM 243
Query: 425 HMICKESYPKMALELMPRMLKRNVLPGVVN----YSTLISGFAKEQSNFEMVERLFTRLV 480
K S L+L + ++ L G V+ Y L+ G+ ++ E +E + V
Sbjct: 244 MGCVKNSDADGVLKLYQELKEK--LGGFVDDGVVYGQLMKGYFMKEMEKEAME-CYEEAV 300
Query: 481 --KAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVS-----YTALIAVF 533
+ + + Y ++ K +A F + + P ++ + ++ +
Sbjct: 301 GENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGY 360
Query: 534 CNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 593
C + A +F++M C P+ ++ L++ C + + A +L+ EM+ K + PD
Sbjct: 361 CAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDE 420
Query: 594 VTYTVLIAWYHKHGRIGE 611
TY +L+ K G+I E
Sbjct: 421 YTYGLLMDTCFKEGKIDE 438
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/339 (18%), Positives = 134/339 (39%), Gaps = 21/339 (6%)
Query: 306 PDVYSYNMLLNAF--CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQ 361
P++ +YN++ A+ +K ++ + PSI + L+ L+ + L
Sbjct: 163 PNIITYNLIFQAYLDVRKPEIALEHYKLFIDN-APLNPSIATFRILVKGLVSNDNL---- 217
Query: 362 LYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ--GINLNQYS 419
+K++E+ M + ++ ++++ + L L ++ E+ G +
Sbjct: 218 --EKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVV 275
Query: 420 YNEIIHMICKESYPKMALELMPRMLKRN--VLPGVVNYSTLISGFAKEQSNFEMVERLFT 477
Y +++ + K A+E + N V + Y+ ++ + E F+ +LF
Sbjct: 276 YGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALS-ENGKFDEALKLFD 334
Query: 478 RLVKAG-----ITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAV 532
+ K + N T+ +++ + K +A F +M PD +S+ L+
Sbjct: 335 AVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQ 394
Query: 533 FCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPD 592
C+ + A L+ EM P+ YTY L+D K ID + M + P+
Sbjct: 395 LCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPN 454
Query: 593 VVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIK 631
+ Y L K G++ + F M + + D+ K
Sbjct: 455 LAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKMDDEAYK 493
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 99/545 (18%), Positives = 206/545 (37%), Gaps = 92/545 (16%)
Query: 113 IVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHI 172
+ GY + ++ +P S + + LIK +A N+ A ++F +N+G+ L+
Sbjct: 114 VDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLN- 172
Query: 173 RSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCG------DIRLAAEIL 226
+ T++ +C D R+ +
Sbjct: 173 ---------------------------------EVTLATVISACSHLGGIWDCRMLQSLA 199
Query: 227 GKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQR 286
K+ + G V T ++ LC C K RKL ++ N +N +++G+ +
Sbjct: 200 IKL-KLEGRVFVSTNLLHMYCLCLC------LKDARKLFDEMPERNLVTWNVMLNGYSKA 252
Query: 287 GAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNY 346
G + +A E+ +++ T D+ S+ +++ +K + C +KPS V
Sbjct: 253 GLIEQAEELFDQI----TEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMM 308
Query: 347 TSLILLCKNKL---KGQQLY----DKSLEVYN--------------------SMLQNAIR 379
L+ + KG QL+ + + Y+ + +++
Sbjct: 309 VDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEASVK 368
Query: 380 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 439
+ N ++ + G +A + + H++ I +S+N +I + P++AL L
Sbjct: 369 DHIASRNALIAGFVKNGMVEQAREVFDQTHDKDI----FSWNAMISGYAQSLSPQLALHL 424
Query: 440 MPRMLKRN-VLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIH 498
M+ + V P + ++ S + S E +R L + I N +I ++
Sbjct: 425 FREMISSSQVKPDAITMVSVFSAISSLGS-LEEGKRAHDYLNFSTIPPNDNLTAAIIDMY 483
Query: 499 GRTRKRHKAYCRFGE---MIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCL 555
+ A F + + S + P + A+I +A L+ ++ +
Sbjct: 484 AKCGSIETALNIFHQTKNISSSTISP----WNAIICGSATHGHAKLALDLYSDLQSLPIK 539
Query: 556 PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK-GIFPDVVTYTVLIAWYHKHGRIGEKNK 614
PN T+ ++ C ++L F+ MK GI PD+ Y ++ K GR+ E +
Sbjct: 540 PNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKE 599
Query: 615 LFGEM 619
+ +M
Sbjct: 600 MIKKM 604
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 118/257 (45%), Gaps = 27/257 (10%)
Query: 368 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 427
+++ +L++ + N ICN +L ++ + +A ++ D + L+ S+N ++
Sbjct: 62 QIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAK----LDSASFNIMVDGY 117
Query: 428 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFN 487
+ AL+L M +R+ V+Y+TLI G+A+ E +E LF + GI N
Sbjct: 118 VRSRRLWDALKLFDVMPERSC----VSYTTLIKGYAQNNQWSEAME-LFREMRNLGIMLN 172
Query: 488 TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVS-----YTALIAVFCNIREMNVA 542
T T+IS CR M+QS ++ T L+ ++C + A
Sbjct: 173 EVTLATVISACSHLGGIWD--CR---MLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDA 227
Query: 543 CALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAW 602
LF EM NL T+ +++G+ K I+ A +LFD++ K D+V++ +I
Sbjct: 228 RKLFDEMPE----RNLVTWNVMLNGYSKAGLIEQAEELFDQITEK----DIVSWGTMIDG 279
Query: 603 YHKHGRIGEKNKLFGEM 619
+ ++ E + EM
Sbjct: 280 CLRKNQLDEALVYYTEM 296
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/421 (20%), Positives = 163/421 (38%), Gaps = 44/421 (10%)
Query: 238 VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 297
VT+ ++ C+ G +D A +R L ++ C + EA ++L+
Sbjct: 251 AVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLD 310
Query: 298 EMKSSRTFPDVYSYNMLLNAFCKKG---DVXXXXXXXXXXXXCQIKPSIVNYTSLI--LL 352
E+K T +YN+ + A K G + C+++ + Y S++ LL
Sbjct: 311 EIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELE--VFRYNSMVFQLL 368
Query: 353 CKNKLKG-----------------------------QQLYDKSLEVYNSMLQNAIRPNTI 383
+N L G D++LE+Y S + P +
Sbjct: 369 KENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAM 428
Query: 384 ICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRM 443
N+++ C +A +L+ ++G L +++ + + +C + P MA EL+
Sbjct: 429 SYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAA 488
Query: 444 LKRNVLPGVVNYSTLISGF--AKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRT 501
+R++LP + +IS + + M+ LF K+G+ + K +T+LI
Sbjct: 489 AERDLLPKRIAGCKIISALCDVGKVEDALMINELFN---KSGVDTSFKMFTSLIYGSITL 545
Query: 502 RKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIR--EMNVACALFQEMSRIGCLPNLY 559
+ A M + P Y +I C + E N L + + +
Sbjct: 546 MRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSL-WEHKVQ 604
Query: 560 TYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
Y I+G LA ++D M R GI P V + +++ Y K+ +I + F ++
Sbjct: 605 AYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDL 664
Query: 620 K 620
+
Sbjct: 665 R 665
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 145/380 (38%), Gaps = 46/380 (12%)
Query: 224 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 283
+IL ++ G +P T + C+ G+VD A +L R + +N +IH
Sbjct: 378 DILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTL 437
Query: 284 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 343
C +V +A +VL+ F +++ L NA C KG KP
Sbjct: 438 CANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKG-----------------KP-- 478
Query: 344 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 403
D + E+ + + + P I I+ C G+ +AL
Sbjct: 479 --------------------DMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALM 518
Query: 404 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 463
+ E F++ G++ + + +I+ +A +L+ RM ++ P Y +I
Sbjct: 519 INELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVC 578
Query: 464 KEQSNFEMVERLFTRLVKAGITF---NTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLC 520
+ +S + FT L+K ++ + Y I G K A + M + +
Sbjct: 579 EMESG---EKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGIT 635
Query: 521 PDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQL 580
P S ++ + ++ A F ++ G Y +I G CK + +D A
Sbjct: 636 PTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKK-RLYQVMIVGLCKANKLDDAMHF 694
Query: 581 FDEMKRKGIFPDVVTYTVLI 600
+EMK +G+ P + Y V I
Sbjct: 695 LEEMKGEGLQPSIECYEVNI 714
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 9/190 (4%)
Query: 279 VIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDV-XXXXXXXXXXXXC 337
+ C+ G V+EA ++++E+ + PD Y+YN LL CK D+
Sbjct: 165 AVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDF 224
Query: 338 QIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNA-IRPNTIICNHILRVHCRE 395
+KP +V++T LI +C +K + +Y S L NA +P+ + N I++ C
Sbjct: 225 DVKPDLVSFTILIDNVCNSKNLREAMY------LVSKLGNAGFKPDCFLYNTIMKGFCTL 278
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
+ EA+ + + E+G+ +Q +YN +I + K + A + M+ P Y
Sbjct: 279 SKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATY 338
Query: 456 STLISGFAKE 465
++L++G ++
Sbjct: 339 TSLMNGMCRK 348
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 92/203 (45%), Gaps = 2/203 (0%)
Query: 369 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 428
V N M+ N + P+ + + +R C G+ EA L+++ E+ + Y+YN ++ +C
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 429 KESYPKMALELMPRMLKR-NVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFN 487
K + E + M +V P +V+++ LI + N L ++L AG +
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSK-NLREAMYLVSKLGNAGFKPD 264
Query: 488 TKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQ 547
Y T++ K +A + +M + + PD+++Y LI + A +
Sbjct: 265 CFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLK 324
Query: 548 EMSRIGCLPNLYTYTCLIDGFCK 570
M G P+ TYT L++G C+
Sbjct: 325 TMVDAGYEPDTATYTSLMNGMCR 347
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 1/148 (0%)
Query: 465 EQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSC-LCPDE 523
E + + L L + +T TY L+ + + H Y EM + PD
Sbjct: 171 ETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDL 230
Query: 524 VSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE 583
VS+T LI CN + + A L ++ G P+ + Y ++ GFC + A ++ +
Sbjct: 231 VSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKK 290
Query: 584 MKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
MK +G+ PD +TY LI K GR+ E
Sbjct: 291 MKEEGVEPDQITYNTLIFGLSKAGRVEE 318
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 82/208 (39%), Gaps = 5/208 (2%)
Query: 148 ASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNI 207
A +S + + H+V N GLE + + ++ L L E P+
Sbjct: 135 APDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDT 194
Query: 208 HTYTIMMS----CGDIRLAAEILGKIYRS-GGNPTVVTYGTYIRGLCECGYVDVAHKLVR 262
+TY ++ C D+ + E + ++ P +V++ I +C + A LV
Sbjct: 195 YTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVS 254
Query: 263 KLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKG 322
KL + +N ++ GFC +EA+ V ++MK PD +YN L+ K G
Sbjct: 255 KLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAG 314
Query: 323 DVXXXXXXXXXXXXCQIKPSIVNYTSLI 350
V +P YTSL+
Sbjct: 315 RVEEARMYLKTMVDAGYEPDTATYTSLM 342
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 205 PNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 260
P++ ++TI++ + ++R A ++ K+ +G P Y T ++G C A +
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 261 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 320
+K+ + + +N +I G + G V EA L+ M + PD +Y L+N C+
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 321 KG 322
KG
Sbjct: 348 KG 349
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%)
Query: 499 GRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNL 558
G+ K A M + + P + YT LI + E++ A +F+EM+ G LPN+
Sbjct: 700 GKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNV 759
Query: 559 YTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE 618
+TY +I G C A L EM+ +G P+ V Y+ L+ + K G++ E K+ E
Sbjct: 760 FTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKE 819
Query: 619 M 619
M
Sbjct: 820 M 820
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%)
Query: 481 KAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMN 540
+ GI + YTTLI + + + KA F EM P+ +Y ++I C E
Sbjct: 717 EVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFR 776
Query: 541 VACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVT 595
AC L +EM GC PN Y+ L+ K + A ++ EM +KG + +V+
Sbjct: 777 EACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKGHYVHLVS 831
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 217 GDIRLAA-EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHC 275
G+ LAA L + G +P+V+ Y T I G G +D A ++ R++ K N
Sbjct: 702 GNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFT 761
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKG 322
+N++I G C G EA +L+EM+S P+ Y+ L+ K G
Sbjct: 762 YNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAG 808
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 339 IKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 398
I PS+++YT+LI + +L DK+ E++ M PN N ++R C G+F
Sbjct: 720 IDPSVLHYTTLI---DGYVVSGEL-DKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEF 775
Query: 399 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 447
REA LL++ +G N N Y+ ++ + K A +++ M+K+
Sbjct: 776 REACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/412 (20%), Positives = 171/412 (41%), Gaps = 25/412 (6%)
Query: 216 CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHC 275
C ++ ++ +I R + + I L C ++A VR + P N H
Sbjct: 29 CANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLA---VRVFNQVQEP-NVHL 84
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
N++I Q +A V EM+ F D ++Y LL A + +
Sbjct: 85 CNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIE 144
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
+ I +LI C ++ G + D +++++ M + +T+ N +L +
Sbjct: 145 KLGLSSDIYVPNALI-DCYSRCGGLGVRD-AMKLFEKMSER----DTVSWNSMLGGLVKA 198
Query: 396 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
G+ R+A L ++ ++ + S+N ++ + A EL +M +RN V++
Sbjct: 199 GELRDARRLFDEMPQRDL----ISWNTMLDGYARCREMSKAFELFEKMPERN----TVSW 250
Query: 456 STLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMI 515
ST++ G++K + EM +F ++ N T+T +I+ + +A +M+
Sbjct: 251 STMVMGYSK-AGDMEMARVMFDKMPLPAK--NVVTWTIIIAGYAEKGLLKEADRLVDQMV 307
Query: 516 QSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 575
S L D + +++A +++ + + R N Y L+D + K +
Sbjct: 308 ASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLK 367
Query: 576 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
A +F+++ +K D+V++ ++ HG E +LF M+ I D
Sbjct: 368 KAFDVFNDIPKK----DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPD 415
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/385 (15%), Positives = 166/385 (43%), Gaps = 38/385 (9%)
Query: 213 MMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLN 272
++ G++R A + ++ + ++++ T + G C + A +L K+ + N
Sbjct: 195 LVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPER----N 246
Query: 273 SHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXX 332
+ ++ ++ G+ + G + A + ++M +V ++ +++ + +KG +
Sbjct: 247 TVSWSTMVMGYSKAGDMEMARVMFDKMPLPAK--NVVTWTIIIAGYAEKGLLKEADRLVD 304
Query: 333 XXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVH 392
+K S++ C L + +++ + ++ + N + N +L ++
Sbjct: 305 QMVASGLKFDAAAVISILAACTE----SGLLSLGMRIHSILKRSNLGSNAYVLNALLDMY 360
Query: 393 CREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGV 452
+ G ++A + D ++ + S+N ++H + + K A+EL RM + + P
Sbjct: 361 AKCGNLKKAFDVFNDIPKKDL----VSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDK 416
Query: 453 VNYSTLI-----SGFAKEQSN-FEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHK 506
V + ++ +G E + F +E+++ + + Y L+ + GR + +
Sbjct: 417 VTFIAVLCSCNHAGLIDEGIDYFYSMEKVYD------LVPQVEHYGCLVDLLGRVGRLKE 470
Query: 507 AYCRFGEMIQSC-LCPDEVSYTALIAVFCNIREMNVACALFQEMSRIG-CLPNLYTYTCL 564
A +++Q+ + P+ V + AL+ E+++A + + ++ C P Y+ L
Sbjct: 471 AI----KVVQTMPMEPNVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPG--NYSLL 524
Query: 565 IDGFCKIDYIDLATQLFDEMKRKGI 589
+ + + + + +MK G+
Sbjct: 525 SNIYAAAEDWEGVADIRSKMKSMGV 549
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/417 (19%), Positives = 178/417 (42%), Gaps = 28/417 (6%)
Query: 203 PLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAH 258
P ++ ++ ++SC G+ A E+ G++ SG P V+ I +++
Sbjct: 169 PERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGK 228
Query: 259 KLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAF 318
++ RK K L+ + +A++ + + + A EV ++M + ++N ++ +
Sbjct: 229 EIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPR----KSLVAWNSMIKGY 284
Query: 319 CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLC---KNKLKGQQLYDKSLEVYNSMLQ 375
KGD +PS TS+++ C +N L G+ ++ V S++
Sbjct: 285 VAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGY---VIRSVVN 341
Query: 376 NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 435
I N + + L C E E + F + ++ + S+N +I
Sbjct: 342 ADIYVNCSLID--LYFKCGEANLAETV-----FSKTQKDVAE-SWNVMISSYISVGNWFK 393
Query: 436 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
A+E+ +M+ V P VV +++++ + + E +++ + ++ + + + L+
Sbjct: 394 AVEVYDQMVSVGVKPDVVTFTSVLPA-CSQLAALEKGKQIHLSISESRLETDELLLSALL 452
Query: 496 SIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCL 555
++ + +A+ F + + D VS+T +I+ + + + A F EM + G
Sbjct: 453 DMYSKCGNEKEAFRIFNSIPK----KDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLK 508
Query: 556 PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK-GIFPDVVTYTVLIAWYHKHGRIGE 611
P+ T ++ ID + F +M+ K GI P + Y+ +I + GR+ E
Sbjct: 509 PDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLE 565
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/358 (19%), Positives = 149/358 (41%), Gaps = 44/358 (12%)
Query: 292 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL 351
+L+V +EM DV S+N +++ F + G+ +P+ V+ T I
Sbjct: 161 SLQVFDEMPER----DVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAIS 216
Query: 352 LCKNKL---KGQQLYDKS------------------------LEVYNSMLQNAIRPNTII 384
C L +G++++ K LEV + Q R + +
Sbjct: 217 ACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVA 276
Query: 385 CNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRML 444
N +++ + +G + + +L +G +Q + I+ M C S + + + +
Sbjct: 277 WNSMIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSIL-MACSRSRNLLHGKFIHGYV 335
Query: 445 KRNVLPG--VVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTR 502
R+V+ VN S + F ++N + E +F++ K +++ +IS +
Sbjct: 336 IRSVVNADIYVNCSLIDLYFKCGEAN--LAETVFSKTQKD----VAESWNVMISSYISVG 389
Query: 503 KRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYT 562
KA + +M+ + PD V++T+++ + + + +S + +
Sbjct: 390 NWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLS 449
Query: 563 CLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 620
L+D + K A ++F+ + +K DVV++TV+I+ Y HG+ E F EM+
Sbjct: 450 ALLDMYSKCGNEKEAFRIFNSIPKK----DVVSWTVMISAYGSHGQPREALYQFDEMQ 503
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 108/545 (19%), Positives = 208/545 (38%), Gaps = 75/545 (13%)
Query: 93 IIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLD-LPHHSVLVFNVLIKVFASNS 151
+IHT + ++ + +VG + FE + D +P V +N +I F +
Sbjct: 128 MIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSG 187
Query: 152 MLEHAHQVFVSAKNVGLE-------LHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPL 204
E A ++F ++ G E + I +C+ LL L E
Sbjct: 188 EAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNS 247
Query: 205 PNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY----VDVAHKL 260
+ Y C + +A E+ K+ R ++V + + I+G G V++ +++
Sbjct: 248 ALVDMYG---KCDCLEVAREVFQKMPR----KSLVAWNSMIKGYVAKGDSKSCVEILNRM 300
Query: 261 V----RKLHCKLHPLNSHCFNA-------VIHGFCQRGAVNEALEV-------------- 295
+ R L + C + IHG+ R VN + V
Sbjct: 301 IIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEA 360
Query: 296 -LEEMKSSRTFPDVY-SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLC 353
L E S+T DV S+N++++++ G+ +KP +V +TS++ C
Sbjct: 361 NLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPAC 420
Query: 354 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 413
+K +++ S+ ++ + + ++ + +L ++ + G +EA + ++ +
Sbjct: 421 SQ----LAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDV 476
Query: 414 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 473
S+ +I P+ AL M K + P V ++S E ++
Sbjct: 477 ----VSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLK 532
Query: 474 RLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVF 533
K GI + Y+ +I I GR + +AY E+IQ P+ L++
Sbjct: 533 FFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAY----EIIQQ--TPETSDNAELLSTL 586
Query: 534 CNIREMNVACALFQEMS---RIGCL------PNLYTYTCLIDGFCKIDYIDLATQLFDEM 584
+ AC L E S RI L + TY L + + + D A ++ +M
Sbjct: 587 FS------ACCLHLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKM 640
Query: 585 KRKGI 589
K G+
Sbjct: 641 KEMGL 645
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/365 (20%), Positives = 159/365 (43%), Gaps = 39/365 (10%)
Query: 272 NSHCFNAVIHGFCQRGAVNEALEVLEEM-KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 330
++ +N +I G+ + E + +L M ++ PD Y++ +++ G V
Sbjct: 73 GTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSV 132
Query: 331 XXXXXXCQIKPSIVNYTSLILL---CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNH 387
+V TS + CK+ ++++ + E +NA+ ++ +
Sbjct: 133 HGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPE------RNAVSWTALVVAY 186
Query: 388 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 447
+ + G+ EA ++ + E+ + S+N ++ + K A +L M KR+
Sbjct: 187 V-----KSGELEEAKSMFDLMPERNLG----SWNALVDGLVKSGDLVNAKKLFDEMPKRD 237
Query: 448 VLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKA 507
+ ++Y+++I G+AK +MV L + + + ++ LI + + + ++A
Sbjct: 238 I----ISYTSMIDGYAK---GGDMVSA--RDLFEEARGVDVRAWSALILGYAQNGQPNEA 288
Query: 508 YCRFGEMIQSCLCPDEVSYTALIAVFCNIR--EM--NVACALFQEMSRIGCLPNLYTYTC 563
+ F EM + PDE L++ + E+ V L Q M++ + Y
Sbjct: 289 FKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNK---FSSHYVVPA 345
Query: 564 LIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANC 623
LID K ++D A +LF+EM ++ D+V+Y ++ HG E +LF +M
Sbjct: 346 LIDMNAKCGHMDRAAKLFEEMPQR----DLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEG 401
Query: 624 ILLDD 628
I+ D+
Sbjct: 402 IVPDE 406
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 160/378 (42%), Gaps = 67/378 (17%)
Query: 277 NAVI--HGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 334
NA I +G CQ A+ EA V +EM+ D S+N ++ A + G
Sbjct: 421 NAAIDMYGKCQ--ALAEAFRVFDEMRRR----DAVSWNAIIAAHEQNGKGYETLFLFVSM 474
Query: 335 XXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 394
+I+P + S++ C G +E+++S++++ + N+ + ++ ++ +
Sbjct: 475 LRSRIEPDEFTFGSILKACTGGSLGY-----GMEIHSSIVKSGMASNSSVGCSLIDMYSK 529
Query: 395 EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 454
G EA + F ++ N++ +E + +M + + V+
Sbjct: 530 CGMIEEAEKIHSRFFQRA-NVSG------------------TMEELEKMHNKRLQEMCVS 570
Query: 455 YSTLISGFA-KEQSNFEMVERLFTRLVKAGITFNTKTYTTLIS-------------IHGR 500
++++ISG+ KEQS E + LFTR+++ GIT + TY T++ IH +
Sbjct: 571 WNSIISGYVMKEQS--EDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQ 628
Query: 501 TRKRH------------KAYCRFGE------MIQSCLCPDEVSYTALIAVFCNIREMNVA 542
K+ Y + G+ M + L D V++ A+I + + + A
Sbjct: 629 VIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEA 688
Query: 543 CALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK-GIFPDVVTYTVLIA 601
LF+ M PN T+ ++ + ID + F MKR G+ P + Y+ ++
Sbjct: 689 IQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVD 748
Query: 602 WYHKHGRIGEKNKLFGEM 619
K G++ +L EM
Sbjct: 749 ILGKSGKVKRALELIREM 766
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 106/276 (38%), Gaps = 39/276 (14%)
Query: 378 IRPNTIICNHILRVHCREGQFREALTLLED-FHEQGINLNQYSYNEIIHMICKESYPKMA 436
+ PN + ++ REG L + E E+ N + Y+++IH+ KE++ +
Sbjct: 345 LEPNRVDWIALIN-QLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDV 403
Query: 437 LELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLIS 496
++ +M + + P ++ + L+ ++K NFE F L G+ + K Y +I
Sbjct: 404 ERILKKMSQNGIFPDILTATALVHMYSK-SGNFERATEAFENLKSYGLRPDEKIYEAMIL 462
Query: 497 IHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLP 556
+ K EM L E Y AL+ + + + N A + M P
Sbjct: 463 GYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGP 522
Query: 557 -NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPD----------------------- 592
+ Y+ ++ + K +D A FDEM++ G PD
Sbjct: 523 LSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRL 582
Query: 593 ------------VVTYTVLIAWYHKHGRIGEKNKLF 616
V+TYTVL+ W G I E +L
Sbjct: 583 LLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLL 618
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/225 (20%), Positives = 91/225 (40%), Gaps = 4/225 (1%)
Query: 369 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 428
+ M QN I P+ + ++ ++ + G F A E+ G+ ++ Y +I
Sbjct: 406 ILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYV 465
Query: 429 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK--EQSNFEMVERLFTRLVKAGITF 486
PK+ LM M + + Y L+ +A+ + + + ++F
Sbjct: 466 NAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSF 525
Query: 487 NTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALF 546
+ Y+ + +G+ + KA F EM + PD+ L+ + ++ A L
Sbjct: 526 --EAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLL 583
Query: 547 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFP 591
++ + G + TYT L+D + I+ A QL ++ + G P
Sbjct: 584 LQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLGEAP 628
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 115/261 (44%), Gaps = 4/261 (1%)
Query: 362 LYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQ-FREA-LTLLEDFHEQGINLNQYS 419
+ D+S++ + ++ Q I P T+ + L C + ++EA LE GI + +
Sbjct: 126 MLDRSIQTFRNLEQYEI-PRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLET 184
Query: 420 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRL 479
YN +I ++C+ + ++ M ++ + P ++ +I GF KE+ F+ V ++ +
Sbjct: 185 YNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEE-KFDEVRKVMRMM 243
Query: 480 VKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREM 539
+ G+ TY +I + +K +A ++ + P+ V+Y+ LI FC+ +
Sbjct: 244 DEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENL 303
Query: 540 NVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 599
+ A LF+ M G P+ Y LI CK + A L E K P L
Sbjct: 304 DEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWL 363
Query: 600 IAWYHKHGRIGEKNKLFGEMK 620
+ ++ E +L +K
Sbjct: 364 VNGLASRSKVDEAKELIAVVK 384
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 6/187 (3%)
Query: 226 LGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQ 285
+ K+Y G P + TY IR LCE G ++ +V ++ K + F +I GF +
Sbjct: 172 MPKMY--GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYK 229
Query: 286 RGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVN 345
+E +V+ M V +YN+++ CK+ C+++P+ V
Sbjct: 230 EEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVT 289
Query: 346 YTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLL 405
Y+ LI + ++ D+++ ++ M+ N +P++ ++ C+ G F AL L
Sbjct: 290 YSLLI----HGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILC 345
Query: 406 EDFHEQG 412
+ E+
Sbjct: 346 RESMEKN 352
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 103/234 (44%), Gaps = 5/234 (2%)
Query: 364 DKSLEVYNSMLQN-AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 422
D++++ + + + I P+ + N +++ CR+G + L++ E+ + G + S+N
Sbjct: 174 DEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNT 233
Query: 423 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKA 482
++ + + M +N+ P + +Y++ + G + + F L +
Sbjct: 234 LLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNK-KFTDALNLIDVMKTE 292
Query: 483 GITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVA 542
GI+ + TY LI+ + + + EM + L PD V+Y LI + C +++ A
Sbjct: 293 GISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRA 352
Query: 543 CALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIF---PDV 593
+ +E + L Y +++ ID ATQL K + F PD+
Sbjct: 353 VEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKNGKLQSYFRYLPDL 406
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/289 (21%), Positives = 118/289 (40%), Gaps = 15/289 (5%)
Query: 101 GMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVF 160
G++ LR+ + D+ Q+ D V +++ ++ + M EHAH++F
Sbjct: 88 GLYSAFIRRLREAKKFSTIDEVL-QYQKKFDDIKSEDFVIRIML-LYGYSGMAEHAHKLF 145
Query: 161 VSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMET-GPLPNIHTYTIMMSC--- 216
+ E ++S N LL L E G P++ TY M+
Sbjct: 146 DEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCR 205
Query: 217 -GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHC 275
G + I ++ ++G P ++++ T + ++ + K N
Sbjct: 206 KGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRS 265
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
+N+ + G + +AL +++ MK+ PDV++YN L+ A+ ++
Sbjct: 266 YNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMK 325
Query: 336 XCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAI--RPN 381
+ P V Y LI LLCK KG D+++EV +++ + RPN
Sbjct: 326 EKGLTPDTVTYCMLIPLLCK---KGD--LDRAVEVSEEAIKHKLLSRPN 369
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 100/213 (46%), Gaps = 11/213 (5%)
Query: 251 CGYVDVAHKL---VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF-P 306
G + AHKL + +L+C+ FNA++ + ++EA++ +E+ P
Sbjct: 135 SGMAEHAHKLFDEMPELNCER---TVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITP 191
Query: 307 DVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKS 366
D+ +YN ++ A C+KG + +P ++++ +L+ + ++L+ +
Sbjct: 192 DLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLL----EEFYRRELFVEG 247
Query: 367 LEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHM 426
+++ M + PN N +R R +F +AL L++ +GI+ + ++YN +I
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
Query: 427 ICKESYPKMALELMPRMLKRNVLPGVVNYSTLI 459
++ + ++ M ++ + P V Y LI
Sbjct: 308 YRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLI 340
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 83/199 (41%), Gaps = 14/199 (7%)
Query: 436 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLI 495
A +L M + N V +++ L+S + + E ++ K GIT + TY T+I
Sbjct: 141 AHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMI 200
Query: 496 SIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCL 555
R F E+ ++ PD +S+ L+ F RE LF E RI L
Sbjct: 201 KALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYR-RE------LFVEGDRIWDL 253
Query: 556 -------PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 608
PN+ +Y + G + A L D MK +GI PDV TY LI Y
Sbjct: 254 MKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNN 313
Query: 609 IGEKNKLFGEMKANCILLD 627
+ E K + EMK + D
Sbjct: 314 LEEVMKCYNEMKEKGLTPD 332
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 96/215 (44%), Gaps = 7/215 (3%)
Query: 237 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLH-PLNSHCFNAVIHGFCQRGAVNEALEV 295
TV ++ + +D A K ++L KL + +N +I C++G++++ L +
Sbjct: 156 TVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSI 215
Query: 296 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCK 354
EE++ + PD+ S+N LL F ++ + P+I +Y S + L +
Sbjct: 216 FEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTR 275
Query: 355 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 414
NK + +L + + M I P+ N ++ + + E + + E+G+
Sbjct: 276 NKK-----FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLT 330
Query: 415 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL 449
+ +Y +I ++CK+ A+E+ +K +L
Sbjct: 331 PDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLL 365
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 95/226 (42%), Gaps = 39/226 (17%)
Query: 386 NHILRVHCREGQFREALTLLEDFHEQ-GINLNQYSYNEIIHMICKESYPKMALELMPRML 444
N +L + + EA+ ++ E+ GI + +YN +I +C++ L + +
Sbjct: 161 NALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELE 220
Query: 445 KRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKR 504
K P +++++TL+ F + + LF + G
Sbjct: 221 KNGFEPDLISFNTLLEEFYRRE--------LF--------------------VEGD---- 248
Query: 505 HKAYCRFGEMIQS-CLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTC 563
R ++++S L P+ SY + + ++ A L M G P+++TY
Sbjct: 249 -----RIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNA 303
Query: 564 LIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
LI + + ++ + ++EMK KG+ PD VTY +LI K G +
Sbjct: 304 LITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDL 349
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 159/379 (41%), Gaps = 72/379 (18%)
Query: 252 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGA-VNEALEVLEEMKSSRTFPDVYS 310
G +D A ++ + K N+ +N+++ G + + + EA ++ +E+ PD +S
Sbjct: 75 GDIDGALRVFHGMRAK----NTITWNSLLIGISKDPSRMMEAHQLFDEIPE----PDTFS 126
Query: 311 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVY 370
YN++L+ + + VN+ K Q +D+
Sbjct: 127 YNIMLSCYVRN----------------------VNFE----------KAQSFFDRM---- 150
Query: 371 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEII--HMIC 428
++A NT+I + R G+ +A L E+ N+ S+N +I ++ C
Sbjct: 151 --PFKDAASWNTMITGY-----ARRGEMEKARELFYSMMEK----NEVSWNAMISGYIEC 199
Query: 429 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNT 488
+ LE K + GVV ++ +I+G+ K + E+ E +F + + N
Sbjct: 200 GD------LEKASHFFKVAPVRGVVAWTAMITGYMKAK-KVELAEAMFKDMT---VNKNL 249
Query: 489 KTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQE 548
T+ +IS + + F M++ + P+ ++ + + + + + Q
Sbjct: 250 VTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQI 309
Query: 549 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 608
+S+ ++ T LI +CK + A +LF+ MK+K DVV + +I+ Y +HG
Sbjct: 310 VSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKK----DVVAWNAMISGYAQHGN 365
Query: 609 IGEKNKLFGEMKANCILLD 627
+ LF EM N I D
Sbjct: 366 ADKALCLFREMIDNKIRPD 384
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/317 (19%), Positives = 134/317 (42%), Gaps = 27/317 (8%)
Query: 272 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 331
++ +N +I G+ +RG + +A E+ M S+N +++ + + GD+
Sbjct: 154 DAASWNTMITGYARRGEMEKARELFYSMMEKNEV----SWNAMISGYIECGDLEKASHFF 209
Query: 332 XXXXXCQIKP--SIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQN-AIRPNTIICNHI 388
++ P +V +T++I + K +E+ +M ++ + N + N +
Sbjct: 210 ------KVAPVRGVVAWTAMIT--------GYMKAKKVELAEAMFKDMTVNKNLVTWNAM 255
Query: 389 LRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV 448
+ + + + L L E+GI N + + + S ++ ++ + K +
Sbjct: 256 ISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTL 315
Query: 449 LPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAY 508
V ++LIS + K +LF + K + + +IS + + KA
Sbjct: 316 CNDVTALTSLISMYCK-CGELGDAWKLFEVMKKKDVV----AWNAMISGYAQHGNADKAL 370
Query: 509 CRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSR-IGCLPNLYTYTCLIDG 567
C F EMI + + PD +++ A++ + +N+ A F+ M R P YTC++D
Sbjct: 371 CLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDL 430
Query: 568 FCKIDYIDLATQLFDEM 584
+ ++ A +L M
Sbjct: 431 LGRAGKLEEALKLIRSM 447
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 120/243 (49%), Gaps = 11/243 (4%)
Query: 379 RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 438
R + + N I+ + + G + +AL ++ + + + ++ + ++ + + E
Sbjct: 204 RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKE 263
Query: 439 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLV-KAGITFNTKTYTTLISI 497
+ ++++ + V S+L+ +AK + E ER+F+RL + GI++N+ L++
Sbjct: 264 IHGYVIRKGIDSDVYIGSSLVDMYAK-SARIEDSERVFSRLYCRDGISWNS-----LVAG 317
Query: 498 HGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPN 557
+ + + ++A F +M+ + + P V+++++I ++ +++ L + R G N
Sbjct: 318 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN 377
Query: 558 LYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFG 617
++ + L+D + K I A ++FD M D V++T +I + HG E LF
Sbjct: 378 IFIASALVDMYSKCGNIKAARKIFDRMN----VLDEVSWTAIIMGHALHGHGHEAVSLFE 433
Query: 618 EMK 620
EMK
Sbjct: 434 EMK 436
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/349 (19%), Positives = 142/349 (40%), Gaps = 57/349 (16%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
+N +I G+ Q G +AL ++ EM ++ PD ++ + +L F + DV
Sbjct: 210 YNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDV----------- 258
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
+KG+ E++ +++ I + I + ++ ++ +
Sbjct: 259 ---------------------IKGK-------EIHGYVIRKGIDSDVYIGSSLVDMYAKS 290
Query: 396 GQFREALTLLEDFH-EQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 454
+ ++ + + GI S+N ++ + AL L +M+ V PG V
Sbjct: 291 ARIEDSERVFSRLYCRDGI-----SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345
Query: 455 YSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIH---GRTRKRHKAYCRF 511
+S++I A + + ++L +++ G N + L+ ++ G + K + R
Sbjct: 346 FSSVIPACA-HLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRM 404
Query: 512 GEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKI 571
+ DEVS+TA+I + A +LF+EM R G PN + ++ +
Sbjct: 405 NVL-------DEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHV 457
Query: 572 DYIDLATQLFDEM-KRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
+D A F+ M K G+ ++ Y + + G++ E +M
Sbjct: 458 GLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKM 506
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/338 (21%), Positives = 141/338 (41%), Gaps = 21/338 (6%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
+N++I + A+ + +EM+ SR PD + L + + GD+
Sbjct: 316 WNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTL 375
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNT--IICNHILRVHC 393
+ + +++ KL L D + V+N + PNT I N I+ +
Sbjct: 376 RKGWFLEDITIGNAVVVMYAKLG---LVDSARAVFNWL------PNTDVISWNTIISGYA 426
Query: 394 REGQFREALTLLEDFHEQG-INLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGV 452
+ G EA+ + E+G I NQ ++ ++ + + ++L R+LK + V
Sbjct: 427 QNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV 486
Query: 453 VNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFG 512
++L + K E LF ++ + N+ + TLI+ HG KA F
Sbjct: 487 FVVTSLADMYGK-CGRLEDALSLFYQIPRV----NSVPWNTLIACHGFHGHGEKAVMLFK 541
Query: 513 EMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM-SRIGCLPNLYTYTCLIDGFCKI 571
EM+ + PD +++ L++ + ++ F+ M + G P+L Y C++D + +
Sbjct: 542 EMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRA 601
Query: 572 DYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
++ A + M + PD + L++ HG +
Sbjct: 602 GQLETALKFIKSMSLQ---PDASIWGALLSACRVHGNV 636
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 140/341 (41%), Gaps = 36/341 (10%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEE---MKSSRTFP-DVYSYNMLLNAFCKKGDVXXXXXXX 331
+N ++ C G V+ A ++ +E M+SS D ++Y ++ F
Sbjct: 338 YNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVK 397
Query: 332 XXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRV 391
+ P+ ++SLI C N L +++ ++ ML + PN+ C +IL
Sbjct: 398 DDMKSVGVTPNTHTWSSLISACANA----GLVEQANHLFEEMLASGCEPNSQ-CFNILLH 452
Query: 392 HCREG-QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 450
C E Q+ A L + + +N + Y+ ++I+ S P +LK N
Sbjct: 453 ACVEACQYDRAFRLFQSWKGSSVNESLYA-DDIVSKGRTSS---------PNILKNNGPG 502
Query: 451 GVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCR 510
+VN ++ S + + F T TY L+ G R K
Sbjct: 503 SLVNRNS--------NSPYIQASKRFC------FKPTTATYNILLKACGTDYYRGKEL-- 546
Query: 511 FGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
EM L P++++++ LI + ++ A + + M G P++ YT I +
Sbjct: 547 MDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAE 606
Query: 571 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
+ LA LF+EM+R I P+ VTY L+ K+G + E
Sbjct: 607 NKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLE 647
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/357 (19%), Positives = 133/357 (37%), Gaps = 30/357 (8%)
Query: 136 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLK--CLXXXXXXXXXXX 193
++ V N L+ V + + L + +V+ + + + + + S N LLK CL
Sbjct: 301 NIYVINSLMNVNSHD--LGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIY 358
Query: 194 XXXXLMETGPLPNIHTYT---IMMSCGDIRL---AAEILGKIYRSGGNPTVVTYGTYIRG 247
ME+ L + +T I+ D ++ A ++ + G P T+ + I
Sbjct: 359 KEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISA 418
Query: 248 LCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 307
G V+ A+ L ++ NS CFN ++H + + A + + K S
Sbjct: 419 CANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNES 478
Query: 308 VYSYNMLLNAFCKKGDV-------------XXXXXXXXXXXXCQIKPSIVNYTSLILLCK 354
+Y+ +++ ++ C KP+ Y L+ C
Sbjct: 479 LYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFC-FKPTTATYNILLKACG 537
Query: 355 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 414
Y + E+ + M + PN I + ++ + G A+ +L H G
Sbjct: 538 TD------YYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTR 591
Query: 415 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEM 471
+ +Y I + + K+A L M + + P V Y+TL+ +K S E+
Sbjct: 592 PDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEV 648
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 105/269 (39%), Gaps = 26/269 (9%)
Query: 364 DKSLEVYNSMLQNAIRPNTIIC-------NHILRVHCREGQFREALTLLEDFHEQGINLN 416
D+++E++N + P T+ C N +L C F A L+ +G+ +
Sbjct: 163 DQAVELFNGV------PKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPD 216
Query: 417 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLF 476
+ +Y +++ C K A E + M +R P LI G E + +
Sbjct: 217 KRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLN-AGYLESAKEMV 275
Query: 477 TRLVKAGITFNTKTYTTLISIHGRTRK------RHKAYCRFGEMIQSCLCPDEVSYTALI 530
+++ K G + +T+ LI ++ + + C+ G LC D +Y LI
Sbjct: 276 SKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLG------LCVDIDTYKTLI 329
Query: 531 AVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIF 590
I +++ A L G P Y +I G C+ D A F +MK K
Sbjct: 330 PAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHP 389
Query: 591 PDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
P+ YT+LI + G+ + EM
Sbjct: 390 PNRPVYTMLITMCGRGGKFVDAANYLVEM 418
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 85/205 (41%), Gaps = 4/205 (1%)
Query: 222 AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIH 281
A ++ ++ R G P TY + G C G + A + + ++ + + + +I
Sbjct: 201 AYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIE 260
Query: 282 GFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKP 341
G G + A E++ +M PD+ ++N+L+ A K G+V +
Sbjct: 261 GLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCV 320
Query: 342 SIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREA 401
I Y +LI K D++ + N+ +++ +P + I++ CR G F +A
Sbjct: 321 DIDTYKTLIPAVSKIGK----IDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDA 376
Query: 402 LTLLEDFHEQGINLNQYSYNEIIHM 426
+ D + N+ Y +I M
Sbjct: 377 FSFFSDMKVKAHPPNRPVYTMLITM 401
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 99/242 (40%), Gaps = 10/242 (4%)
Query: 361 QLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSY 420
+++ + + M++ ++P+ ++ C G+ +EA L++ +G N
Sbjct: 196 KMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGR 255
Query: 421 NEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLV 480
+ +I + Y + A E++ +M K +P + ++ LI +K E ++
Sbjct: 256 DLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISK-SGEVEFCIEMYYTAC 314
Query: 481 KAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMN 540
K G+ + TY TLI + K +A+ ++ P Y +I C +
Sbjct: 315 KLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFD 374
Query: 541 VACALFQEMSRIGCLPNLYTYTCLIDGFCKI--DYIDLATQLFDEMKRKGIFP-----DV 593
A + F +M PN YT LI C ++D A L EM G+ P D+
Sbjct: 375 DAFSFFSDMKVKAHPPNRPVYTMLIT-MCGRGGKFVDAANYLV-EMTEMGLVPISRCFDM 432
Query: 594 VT 595
VT
Sbjct: 433 VT 434
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 77/179 (43%), Gaps = 2/179 (1%)
Query: 450 PGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYC 509
P + Y L A + +E + ++ ++ + + +T +I +G+ +A
Sbjct: 109 PTSMEYEELAKSLASHK-KYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVE 167
Query: 510 RFGEMIQSCLCPDEVS-YTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGF 568
F + ++ C V Y +L+ C+++ + A AL + M R G P+ TY L++G+
Sbjct: 168 LFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGW 227
Query: 569 CKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
C + A + DEM R+G P +LI G + ++ +M + D
Sbjct: 228 CSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPD 286
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 6/157 (3%)
Query: 475 LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFC 534
L R+++ G+ + +TY L++ K +A EM + P LI
Sbjct: 204 LIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLL 263
Query: 535 NIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 594
N + A + +M++ G +P++ T+ LI+ K ++ +++ + G+ D+
Sbjct: 264 NAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDID 323
Query: 595 TYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIK 631
TY LI K G+I E +L NC+ +DG K
Sbjct: 324 TYKTLIPAVSKIGKIDEAFRLLN----NCV--EDGHK 354
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/384 (18%), Positives = 148/384 (38%), Gaps = 52/384 (13%)
Query: 279 VIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ 338
+IH G + A +V +++ + FP +N ++ + + +
Sbjct: 59 LIHASSSFGDITFARQVFDDLPRPQIFP----WNAIIRGYSRNNHFQDALLMYSNMQLAR 114
Query: 339 IKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 398
+ P + L+ C G V+ + + + + N ++ ++ + +
Sbjct: 115 VSPDSFTFPHLLKACS----GLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRL 170
Query: 399 REALTLLEDFHEQGINLNQ---YSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 455
A T+ E G+ L + S+ I+ + P ALE+ +M K +V P V
Sbjct: 171 GSARTVFE-----GLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVAL 225
Query: 456 STLISGFAKEQSNFEMVERLFTRLVKAG--------ITFNTK------------------ 489
++++ F Q + + + +VK G I+ NT
Sbjct: 226 VSVLNAFTCLQ-DLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMK 284
Query: 490 -----TYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACA 544
+ +IS + + +A F EMI + PD +S T+ I+ + + A +
Sbjct: 285 SPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARS 344
Query: 545 LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYH 604
+++ + R +++ + LID F K ++ A +FD + DVV ++ +I Y
Sbjct: 345 MYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDR----DVVVWSAMIVGYG 400
Query: 605 KHGRIGEKNKLFGEMKANCILLDD 628
HGR E L+ M+ + +D
Sbjct: 401 LHGRAREAISLYRAMERGGVHPND 424
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 84/415 (20%), Positives = 163/415 (39%), Gaps = 37/415 (8%)
Query: 101 GMHLEVFALLRDIVGYCKCD--DSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQ 158
G +VF I Y KC S L LP +++ + ++ +A N A +
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALE 208
Query: 159 VFVSAKNVGLE---LHIRSCNFLLKCLXXXXXXXXXXXXXXXL-METGPLPNIHTYTIMM 214
+F + + ++ + + S CL + +E P I T+
Sbjct: 209 IFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYA 268
Query: 215 SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY----VDVAHKLVRKLHCKLHP 270
CG + A + K+ +P ++ + I G + GY +D+ H+++ K + P
Sbjct: 269 KCGQVATAKILFDKM----KSPNLILWNAMISGYAKNGYAREAIDMFHEMINK---DVRP 321
Query: 271 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 330
++ + I Q G++ +A + E + S DV+ + L++ F K G V
Sbjct: 322 -DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLV 380
Query: 331 XXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLE---VYNSMLQNAIRPNTIICNH 387
+ +V ++++I+ G L+ ++ E +Y +M + + PN +
Sbjct: 381 FDRT----LDRDVVVWSAMIV-------GYGLHGRAREAISLYRAMERGGVHPNDVTFLG 429
Query: 388 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 447
+L G RE + IN Q Y +I ++ + + A E++ M
Sbjct: 430 LLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM---P 486
Query: 448 VLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTR 502
V PGV + L+S K+ + E+ E +L + NT Y L +++ R
Sbjct: 487 VQPGVTVWGALLSA-CKKHRHVELGEYAAQQLFSIDPS-NTGHYVQLSNLYAAAR 539
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%)
Query: 490 TYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM 549
TYTT++ I G + Y F M + + D V+YT+LI + +++ A L++EM
Sbjct: 124 TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 550 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
GC P + +YT + ++ AT+++ EM R + P+ TYTVL+ + G+
Sbjct: 184 RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKC 243
Query: 610 GEKNKLFGEMK 620
E +F +M+
Sbjct: 244 EEALDIFFKMQ 254
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 1/172 (0%)
Query: 455 YSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEM 514
Y+T++ F E + + +F + + G+ +T TYT+LI + A + EM
Sbjct: 125 YTTMLDIFG-EAGRIQSMYSVFHLMKEKGVLIDTVTYTSLIHWVSSSGDVDGAMRLWEEM 183
Query: 515 IQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 574
+ P VSYTA + + + A +++EM R PN +TYT L++
Sbjct: 184 RDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLRSRVSPNCHTYTVLMEYLVATGKC 243
Query: 575 DLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILL 626
+ A +F +M+ G+ PD +LIA K G ++ MK N ++L
Sbjct: 244 EEALDIFFKMQEIGVQPDKAACNILIAKALKFGETSFMTRVLVYMKENGVVL 295
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 10/183 (5%)
Query: 441 PRMLKRNVLPGVVNYS-TLISGFAK--EQSNFEMVERLFTRLVKAGITFNTKTYTTLISI 497
P+++K LP Y+ ++S + SN++ + L G+ +++ ++
Sbjct: 42 PKLVKTQTLPDPSVYTRDIVSNIYNILKYSNWDSAQEQLPHL---GVRWDSHIINRVLKA 98
Query: 498 HGRTRKRHKAYCRFGEMIQ-SCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLP 556
H KA+ F Q D +YT ++ +F + ++F M G L
Sbjct: 99 HP---PMQKAWLFFNWAAQIKGFKHDHFTYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLI 155
Query: 557 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 616
+ TYT LI +D A +L++EM+ G P VV+YT + GR+ E +++
Sbjct: 156 DTVTYTSLIHWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVY 215
Query: 617 GEM 619
EM
Sbjct: 216 KEM 218
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 110/259 (42%), Gaps = 14/259 (5%)
Query: 362 LYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ-GINLNQYSY 420
L D S++ M+ I+PN N ++ REG+ + + E+ G + N YSY
Sbjct: 226 LDDVSVDEAKKMI-GKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSY 284
Query: 421 NEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE--RLFTR 478
N ++ C A ++ M R V+ +V Y+T+I G SNFE+V+ LF
Sbjct: 285 NVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLC---SNFEVVKAKELFRD 341
Query: 479 LVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIRE 538
+ GI TY L++ + + + EM + D ++ AL+ C+ R+
Sbjct: 342 MGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRD 401
Query: 539 MN---VACALFQEMSRIGCL-PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 594
A + ++ R P+ Y L+ C+ +D A + EM KG P
Sbjct: 402 GQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQE 461
Query: 595 TYTVLIAWYHKHGRIGEKN 613
TY I Y G +G++
Sbjct: 462 TYRAFIDGY---GIVGDEE 477
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/333 (19%), Positives = 131/333 (39%), Gaps = 31/333 (9%)
Query: 138 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 197
VF++LIK + ++ A V ++ G+ I +CN L+ +
Sbjct: 163 FVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSR------------- 209
Query: 198 LMETGPLPNIHTYTIMMSCGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 255
G Y + D+ + A +++GKI P T+ + + G +
Sbjct: 210 --RRGASNGYKMYREVFGLDDVSVDEAKKMIGKI-----KPNATTFNSMMVSFYREGETE 262
Query: 256 VAHKLVRKLHCKLH-PLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 314
+ ++ R++ ++ N + +N ++ +C RG ++EA +V EEMK D+ +YN +
Sbjct: 263 MVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTM 322
Query: 315 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML 374
+ C +V I+ + + Y L+ N D L VY M
Sbjct: 323 IGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLV----NGYCKAGDVDSGLVVYREMK 378
Query: 375 QNAIRPNTIICNHILRVHC--REGQ-FREALTLLED-FHEQGINLNQYSYNEIIHMICKE 430
+ + + ++ C R+GQ EA +++D E ++ Y ++ +C++
Sbjct: 379 RKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCED 438
Query: 431 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 463
AL + M+ + P Y I G+
Sbjct: 439 GKMDRALNIQAEMVGKGFKPSQETYRAFIDGYG 471
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/254 (21%), Positives = 115/254 (45%), Gaps = 19/254 (7%)
Query: 364 DKSLEVYNSMLQNAIRPNT--IICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYN 421
D+ L+V+ S++++ R + + + +++ + A+ ++ +GIN + N
Sbjct: 142 DRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCN 201
Query: 422 EIIHMICKE--------------SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS 467
+I + + ++++ +M+ + + P +++++ F +E
Sbjct: 202 ALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGK-IKPNATTFNSMMVSFYREGE 260
Query: 468 NFEMVERLFTRLVK-AGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSY 526
EMVER++ + + G + N +Y L+ + +A + EM + D V+Y
Sbjct: 261 T-EMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAY 319
Query: 527 TALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 586
+I C+ E+ A LF++M G TY L++G+CK +D ++ EMKR
Sbjct: 320 NTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKR 379
Query: 587 KGIFPDVVTYTVLI 600
KG D +T L+
Sbjct: 380 KGFEADGLTIEALV 393
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 55/100 (55%), Gaps = 1/100 (1%)
Query: 521 PDEVSYTALIAVFCNIREMNVACALFQEMSR-IGCLPNLYTYTCLIDGFCKIDYIDLATQ 579
P+ ++ +++ F E + +++EM +GC PN+Y+Y L++ +C + A +
Sbjct: 243 PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEK 302
Query: 580 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
+++EMK +G+ D+V Y +I + + + +LF +M
Sbjct: 303 VWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDM 342
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/422 (18%), Positives = 174/422 (41%), Gaps = 44/422 (10%)
Query: 229 IYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCK-LHPLNSHCFNAVIH------ 281
I+ + VTY T I GL +CGY + A +L +++H L P ++ + V+
Sbjct: 345 IFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGT 404
Query: 282 --------------GFCQRGAVNEALEVL----EEMKSSRTF------PDVYSYNMLLNA 317
GF + AL L +++++ + +V +N++L A
Sbjct: 405 LFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVA 464
Query: 318 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 377
+ D+ +I P+ Y S++ C +L +L + ++++ +++
Sbjct: 465 YGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCI-RLGDLELGE---QIHSQIIKTN 520
Query: 378 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 437
+ N +C+ ++ ++ + G+ A +L F + + S+ +I + ++ AL
Sbjct: 521 FQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDV----VSWTTMIAGYTQYNFDDKAL 576
Query: 438 ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISI 497
+ML R + V + +S A Q+ + +++ + +G + + L+++
Sbjct: 577 TTFRQMLDRGIRSDEVGLTNAVSACAGLQA-LKEGQQIHAQACVSGFSSDLPFQNALVTL 635
Query: 498 HGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPN 557
+ R K ++Y F + D +++ AL++ F A +F M+R G N
Sbjct: 636 YSRCGKIEESYLAF----EQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNN 691
Query: 558 LYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFG 617
+T+ + + + Q+ + + G + LI+ Y K G I + K F
Sbjct: 692 NFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFL 751
Query: 618 EM 619
E+
Sbjct: 752 EV 753
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/412 (18%), Positives = 169/412 (41%), Gaps = 22/412 (5%)
Query: 203 PLPNIHTYTIMM-SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 261
P I T+ M+ L E+ G R GT+ L C VA +V
Sbjct: 147 PERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVV 206
Query: 262 RKLHCKL--HPLNSHCF--NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
++H ++ L N +I + + G V+ A V + ++ D S+ +++
Sbjct: 207 EQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR----LKDHSSWVAMISG 262
Query: 318 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 377
K I P+ ++S++ CK K++ ++ + +++ +L+
Sbjct: 263 LSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACK-KIESLEIGE---QLHGLVLKLG 318
Query: 378 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 437
+T +CN ++ ++ G A + + ++ + +YN +I+ + + Y + A+
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR----DAVTYNTLINGLSQCGYGEKAM 374
Query: 438 ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISI 497
EL RM + P ++L+ + + + F ++L K G N K L+++
Sbjct: 375 ELFKRMHLDGLEPDSNTLASLVVACSADGTLFRG-QQLHAYTTKLGFASNNKIEGALLNL 433
Query: 498 HGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPN 557
+ + A F E + V + ++ + + ++ + +F++M +PN
Sbjct: 434 YAKCADIETALDYFLE----TEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 489
Query: 558 LYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
YTY ++ ++ ++L Q+ ++ + + +VLI Y K G++
Sbjct: 490 QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKL 541
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/385 (16%), Positives = 147/385 (38%), Gaps = 18/385 (4%)
Query: 236 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 295
P TY + ++ G +++ ++ ++ LN++ + +I + + G ++ A ++
Sbjct: 488 PNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDI 547
Query: 296 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 355
L DV S+ ++ + + I+ V T+ + C
Sbjct: 548 LIRFAGK----DVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACA- 602
Query: 356 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 415
G Q + +++ + + N ++ ++ R G+ E+ E E G N+
Sbjct: 603 ---GLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ-TEAGDNI 658
Query: 416 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 475
++N ++ + + AL + RM + + + + + A E +N + +++
Sbjct: 659 ---AWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKA-ASETANMKQGKQV 714
Query: 476 FTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCN 535
+ K G T+ LIS++ + A +F E+ +EVS+ A+I +
Sbjct: 715 HAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVS----TKNEVSWNAIINAYSK 770
Query: 536 IREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK-GIFPDVV 594
+ A F +M PN T ++ I +D F+ M + G+ P
Sbjct: 771 HGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPE 830
Query: 595 TYTVLIAWYHKHGRIGEKNKLFGEM 619
Y ++ + G + + EM
Sbjct: 831 HYVCVVDMLTRAGLLSRAKEFIQEM 855
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
Query: 490 TYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEM 549
TY L+ + G++ + ++A F EM++ L P YTAL+A + ++ A ++ +M
Sbjct: 126 TYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKM 185
Query: 550 SRI-GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 608
C P+++TY+ L+ DL L+ EM + I P+ VT ++++ Y + GR
Sbjct: 186 KSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGR 245
Query: 609 IGEKNKLFGEM 619
+ K+ +M
Sbjct: 246 FDQMEKVLSDM 256
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/289 (20%), Positives = 119/289 (41%), Gaps = 39/289 (13%)
Query: 357 LKGQQLYDKSLEVYNSMLQNAI-RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 415
L ++ + ++LEV++ + + +P +L + + GQ A L ++ E+G+
Sbjct: 98 LIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEP 157
Query: 416 NQYSYNEIIHMICKESYPKMALELMPRMLK-RNVLPGVVNYSTLISGFAKEQSNFEMVER 474
Y ++ + + A ++ +M P V YSTL+ + S F++V+
Sbjct: 158 TVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACV-DASQFDLVDS 216
Query: 475 LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLC-PDEVSYTALIAVF 533
L+ + + IT NT T ++S +GR + + +M+ S C PD + +++VF
Sbjct: 217 LYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVF 276
Query: 534 CNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQL------------- 580
N+ ++++ + +++ G P T+ LI + K D + +
Sbjct: 277 GNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTT 336
Query: 581 ----------------------FDEMKRKGIFPDVVTYTVLIAWYHKHG 607
FD+M+ +G+ D T+ LI Y G
Sbjct: 337 STYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAG 385
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 142/336 (42%), Gaps = 14/336 (4%)
Query: 242 GTYIRGLC---ECGYVDVAHKLVRK-LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 297
GTY++ L + G + A KL + L L P + A++ + + +++A +L+
Sbjct: 125 GTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEP-TVELYTALLAAYTRSNLIDDAFSILD 183
Query: 298 EMKS-SRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNK 356
+MKS + PDV++Y+ LL A I P+ V T I+L
Sbjct: 184 KMKSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTV--TQNIVLSGYG 241
Query: 357 LKGQQLYDKSLEVYNSML-QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 415
G+ +D+ +V + ML A +P+ N IL V G+ + E F GI
Sbjct: 242 RVGR--FDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEP 299
Query: 416 NQYSYNEIIHMICKES-YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVER 474
++N +I K+ Y KM+ +M M K Y+ +I FA + + + +E
Sbjct: 300 ETRTFNILIGSYGKKRMYDKMS-SVMEYMRKLEFPWTTSTYNNIIEAFA-DVGDAKNMEL 357
Query: 475 LFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFC 534
F ++ G+ +TKT+ LI+ + HK + + + Y A+I+
Sbjct: 358 TFDQMRSEGMKADTKTFCCLINGYANAGLFHKVISSVQLAAKFEIPENTAFYNAVISACA 417
Query: 535 NIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 570
++ ++ M C+ + T+ +++ + K
Sbjct: 418 KADDLIEMERVYIRMKERQCVCDSRTFEIMVEAYEK 453
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 202 GPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVV----TYGTYIRGLCECGYVDVA 257
G NI T+ M+ C R E L + + +V+ +Y I G G V+ A
Sbjct: 241 GVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEA 300
Query: 258 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 317
+LV +H K + S+ +N +++G+ + G V + +E+ EM S P+ +Y +L+N
Sbjct: 301 ERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNG 360
Query: 318 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 377
CK G V + + Y++L C + DKSLEV M+++
Sbjct: 361 LCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYR----VGMIDKSLEVVAEMIRDG 416
Query: 378 IRPNTIIC----NHILRVHCREGQ 397
P IC + + V+ +E Q
Sbjct: 417 FIPGATICERLADSLFEVNRKEAQ 440
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 108/260 (41%), Gaps = 5/260 (1%)
Query: 363 YDKSLEVYNSMLQNAIRPNTIICN-HILRVHCREGQFREALTLLEDFHEQGINL-NQYSY 420
+ + +EV+ M N ++ + C H+L + R Q A E GI++ YS
Sbjct: 155 FSEVVEVFEYMKNNEVKIDEKTCTLHLLNLK-RCDQMELARDFFSLMVESGIDVVTVYSL 213
Query: 421 NEIIHMICKESYPKMALELMPRM-LKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRL 479
++ ++C A EL+ M L + V +V + ++I G ++ +FE ++ + +
Sbjct: 214 TVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMI-GCCVKRWDFEELDLVLKLM 272
Query: 480 VKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREM 539
K + + +Y LI K +A M L + Y ++ + +
Sbjct: 273 EKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNLIMNGYSRFGLV 332
Query: 540 NVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 599
L+ EMS G PN TY L++G CK + A +E++ D Y+ L
Sbjct: 333 EKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTL 392
Query: 600 IAWYHKHGRIGEKNKLFGEM 619
++ G I + ++ EM
Sbjct: 393 SEECYRVGMIDKSLEVVAEM 412
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 104/516 (20%), Positives = 206/516 (39%), Gaps = 90/516 (17%)
Query: 116 YCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGL------- 168
YCKC + + +P +V+ ++ L+ N L+ + +F G+
Sbjct: 51 YCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTF 110
Query: 169 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGK 228
++++C L +E G IH + + ++ E++ +
Sbjct: 111 STNLKACGLL------------------NALEKGL--QIHGFCL-------KIGFEMMVE 143
Query: 229 IYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGA 288
+ GN V Y +CG ++ A K+ R++ + + +NA+I GF G
Sbjct: 144 V----GNSLVDMY-------SKCGRINEAEKVFRRIVDR----SLISWNAMIAGFVHAGY 188
Query: 289 VNEALEVLEEMKSS--RTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIK-PSIVN 345
++AL+ M+ + + PD ++ LL A G + PS
Sbjct: 189 GSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSAT 248
Query: 346 YTS----LILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIIC-NHILRVHCREGQFRE 400
T L + C ++ +D+ I+ T+I + ++ + +EG+F E
Sbjct: 249 ITGSLVDLYVKCGYLFSARKAFDQ------------IKEKTMISWSSLILGYAQEGEFVE 296
Query: 401 ALTLLEDFHEQGINLNQYSYNEIIHM-----ICKESYPKMALEL-MPRMLKRNVLPGVVN 454
A+ L + E ++ ++ + II + + ++ AL + +P L+ +VL VV+
Sbjct: 297 AMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVD 356
Query: 455 YSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEM 514
L G E E+ F + + ++T +I+ +G+ K+ F EM
Sbjct: 357 M-YLKCGLVDE------AEKCFAEMQLKDVI----SWTVVITGYGKHGLGKKSVRIFYEM 405
Query: 515 IQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI-GCLPNLYTYTCLIDGFCKIDY 573
++ + PDEV Y A+++ + + LF ++ G P + Y C++D +
Sbjct: 406 LRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGR 465
Query: 574 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 609
+ A L D M I P+V + L++ HG I
Sbjct: 466 LKEAKHLIDTMP---IKPNVGIWQTLLSLCRVHGDI 498
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/355 (20%), Positives = 152/355 (42%), Gaps = 30/355 (8%)
Query: 272 NSHCFNAVIHGFCQRGAVNEA-LEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 330
N + FN +I G +EA L + MK S PD ++YN + A K ++
Sbjct: 95 NHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSV 154
Query: 331 XXXXXXCQIKPSI-VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHIL 389
++ + +N++ +++ K GQ Y + L +T+ N ++
Sbjct: 155 HSSLFKVGLERDVHINHSLIMMYAKC---GQVGYARKL------FDEITERDTVSWNSMI 205
Query: 390 RVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL 449
+ G ++A+ L E+G ++ + ++ M+ S+ + R+L+ +
Sbjct: 206 SGYSEAGYAKDAMDLFRKMEEEGFEPDERT---LVSMLGACSH--LGDLRTGRLLEEMAI 260
Query: 450 PGVVNYST-----LISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKR 504
+ ST LIS + K + + R+F +++K + +T +I+++ + K
Sbjct: 261 TKKIGLSTFLGSKLISMYGK-CGDLDSARRVFNQMIKK----DRVAWTAMITVYSQNGKS 315
Query: 505 HKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCL 564
+A+ F EM ++ + PD + + +++ ++ + + + S + N+Y T L
Sbjct: 316 SEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGL 375
Query: 565 IDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
+D + K ++ A ++F+ M K + T+ +I Y G E LF M
Sbjct: 376 VDMYGKCGRVEEALRVFEAMPVK----NEATWNAMITAYAHQGHAKEALLLFDRM 426
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/422 (18%), Positives = 170/422 (40%), Gaps = 34/422 (8%)
Query: 201 TGPLPNIHTYT-IMMSCG---DIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDV 256
+G P+ TY + ++C +I + + +++ G V + I +CG V
Sbjct: 126 SGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGY 185
Query: 257 AHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLN 316
A RKL ++ ++ +N++I G+ + G +A+++ +M+ PD + +L
Sbjct: 186 A----RKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLG 241
Query: 317 AFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL---CKNKLKGQQLYDKSLEVYNSM 373
A GD+ +I S + LI + C + D + V+N M
Sbjct: 242 ACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGD-------LDSARRVFNQM 294
Query: 374 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 433
I+ + + ++ V+ + G+ EA L + + G++ + + + ++
Sbjct: 295 ----IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVG-- 348
Query: 434 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTT 493
ALEL ++ + + + +G VE R+ +A N T+
Sbjct: 349 --ALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEAL-RVFEAMPVKNEATWNA 405
Query: 494 LISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI- 552
+I+ + +A F M + P ++++ +++ + ++ C F EMS +
Sbjct: 406 MITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMF 462
Query: 553 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 612
G +P + YT +ID + +D A + + K PD + ++ HK + +
Sbjct: 463 GLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK---PDEIMLAAILGACHKRKDVAIR 519
Query: 613 NK 614
K
Sbjct: 520 EK 521
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/300 (20%), Positives = 114/300 (38%), Gaps = 36/300 (12%)
Query: 225 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 284
+L ++ + G P+ VTYG + + C ++ H+ RK+ P N+ + +++
Sbjct: 615 VLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSIP-NALAYRVLVNTLW 673
Query: 285 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 344
+ G +EA+ +E+M+S Y L C G KP +V
Sbjct: 674 KEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVANKPLVV 733
Query: 345 NYTSLILLC---KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREA 401
YT LI C N ++D+ ++ PN + CN +L+ + + G F EA
Sbjct: 734 TYTGLIQACVDSGNIKNAAYIFDQ--------MKKVCSPNLVTCNIMLKAYLQGGLFEEA 785
Query: 402 LTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISG 461
L + E G ++ S + VLP ++T++
Sbjct: 786 RELFQKMSEDGNHIKNSSD-----------------------FESRVLPDTYTFNTMLDT 822
Query: 462 FAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCP 521
A EQ ++ + +++ G FN K + ++ R K + M +S P
Sbjct: 823 CA-EQEKWDDFGYAYREMLRHGYHFNAKRHLRMVLEASRAGKEEVMEATWEHMRRSNRIP 881
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 108/259 (41%), Gaps = 43/259 (16%)
Query: 366 SLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIH 425
+LE ++ L+ P+ ++ N +L + Q+ A +L+ ++G + +Y I+
Sbjct: 581 TLEKWDPRLE----PDVVVYNAVLNACVQRKQWEGAFWVLQQLKQRGQKPSPVTYGLIME 636
Query: 426 -MICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFE---MVERLFTRLVK 481
M+ E Y + E R ++++ +P + Y L++ KE + E VE + +R
Sbjct: 637 VMLACEKY-NLVHEFF-RKMQKSSIPNALAYRVLVNTLWKEGKSDEAVHTVEDMESR--- 691
Query: 482 AGITFNTKTYTTLIS---IHGRTRKRHKAYCRFGEMIQSCLC-----PDEVSYTALIAVF 533
GI + Y L GR C G + +C P V+YT LI
Sbjct: 692 -GIVGSAALYYDLARCLCSAGR--------CNEGLNMLKKICRVANKPLVVTYTGLIQAC 742
Query: 534 CNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKG----- 588
+ + A +F +M ++ C PNL T ++ + + + A +LF +M G
Sbjct: 743 VDSGNIKNAAYIFDQMKKV-CSPNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKN 801
Query: 589 -------IFPDVVTYTVLI 600
+ PD T+ ++
Sbjct: 802 SSDFESRVLPDTYTFNTML 820
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/253 (22%), Positives = 108/253 (42%), Gaps = 44/253 (17%)
Query: 377 AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMA 436
+I P+ N +++ C +G F EA+ L+++ +G+ + ++N ++H ESY K
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLH----ESYTKGK 227
Query: 437 LE----LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYT 492
E + RM+++NV + +Y+ + G A E + EMV LF +L
Sbjct: 228 FEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVS-LFDKL------------- 273
Query: 493 TLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI 552
G L PD ++TA+I F + +++ A ++E+ +
Sbjct: 274 -----KGNE-----------------LKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKN 311
Query: 553 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 612
GC P + + L+ CK ++ A +L E+ K + D ++ K + E
Sbjct: 312 GCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEA 371
Query: 613 NKLFGEMKANCIL 625
++ K N L
Sbjct: 372 EEIVELAKTNDYL 384
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 98/214 (45%), Gaps = 5/214 (2%)
Query: 237 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLH-PLNSHCFNAVIHGFCQRGAVNEALEV 295
T +++ + D+ + ++L KL + +N +I G C +G+ EA+ +
Sbjct: 140 TALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVAL 199
Query: 296 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 355
++E+++ PD ++N+LL+ KG +K I +Y + +L
Sbjct: 200 IDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAM 259
Query: 356 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 415
+ K +++ + +++ + N ++P+ +++ EG+ EA+T ++ + G
Sbjct: 260 ENKSEEM----VSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRP 315
Query: 416 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVL 449
++ +N ++ ICK + A EL + + +L
Sbjct: 316 LKFVFNSLLPAICKAGDLESAYELCKEIFAKRLL 349
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 86/207 (41%), Gaps = 8/207 (3%)
Query: 236 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 295
P V +Y T I+GLC G A L+ ++ K + FN ++H +G E ++
Sbjct: 175 PDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQI 234
Query: 296 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLC 353
M D+ SYN L + ++KP + +T++I +
Sbjct: 235 WARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVS 294
Query: 354 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 413
+ KL D+++ Y + +N RP + N +L C+ G A L ++ + +
Sbjct: 295 EGKL------DEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRL 348
Query: 414 NLNQYSYNEIIHMICKESYPKMALELM 440
+++ E++ + K S A E++
Sbjct: 349 LVDEAVLQEVVDALVKGSKQDEAEEIV 375
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 110/249 (44%), Gaps = 10/249 (4%)
Query: 387 HILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRML-- 444
I+ ++ R G F A + ++ E+ S+N +++ C S +E + + L
Sbjct: 111 RIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNA-CVNSKKFDLVEGIFKELPG 169
Query: 445 KRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLIS---IHGRT 501
K ++ P V +Y+TLI G + S E V L + G+ + T+ L+ G+
Sbjct: 170 KLSIEPDVASYNTLIKGLCGKGSFTEAVA-LIDEIENKGLKPDHITFNILLHESYTKGKF 228
Query: 502 RKRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTY 561
+ + + R M++ + D SY A + + +LF ++ P+++T+
Sbjct: 229 EEGEQIWAR---MVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTF 285
Query: 562 TCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 621
T +I GF +D A + E+++ G P + L+ K G + +L E+ A
Sbjct: 286 TAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFA 345
Query: 622 NCILLDDGI 630
+L+D+ +
Sbjct: 346 KRLLVDEAV 354
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/341 (19%), Positives = 137/341 (40%), Gaps = 26/341 (7%)
Query: 277 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 336
N +++ + + G++ EA +V E+M D ++ L++ + +
Sbjct: 99 NTLLNMYAKCGSLEEARKVFEKMPQR----DFVTWTTLISGYSQHDRPCDALLFFNQMLR 154
Query: 337 CQIKPSIVNYTSLILLCKNKLKG---QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 393
P+ +S+I + +G QL+ ++ N + + +L ++
Sbjct: 155 FGYSPNEFTLSSVIKAAAAERRGCCGHQLH-------GFCVKCGFDSNVHVGSALLDLYT 207
Query: 394 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 453
R G +A + + + N S+N +I + S + ALEL ML+ P
Sbjct: 208 RYGLMDDAQLVFDALESR----NDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHF 263
Query: 454 NYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGE 513
+Y++L G E + + ++K+G TL+ ++ ++ H A F
Sbjct: 264 SYASLF-GACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 322
Query: 514 MIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 573
+ + D VS+ +L+ + A F+EM R+G PN ++ ++
Sbjct: 323 LAKR----DVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGL 378
Query: 574 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNK 614
+D ++ MK+ GI P+ Y ++ GR G+ N+
Sbjct: 379 LDEGWHYYELMKKDGIVPEAWHYVTVVDLL---GRAGDLNR 416
>AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24528423-24529988 REVERSE
LENGTH=521
Length = 521
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 24/239 (10%)
Query: 376 NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 435
N I P+ IC+ ++ C + EA L + G + +YN ++ +CK K
Sbjct: 239 NEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKD 298
Query: 436 ALELMPRMLK-------RNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVKAGITFNT 488
+L P + K R V ++ LI+ K + E + LF R+ + G +
Sbjct: 299 PFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMT-LFGRMGEWGCQPDA 357
Query: 489 KTYTTLI-SIHGRTR--------KRHKAYCRFGEMIQSCLCPDEVSYTALIAVFCNIREM 539
+TY LI S++ R + K+ +GE++ ++ Y + + C I +
Sbjct: 358 ETYLVLIRSLYQAARIGEGDEMIDKMKS-AGYGELL------NKKEYYGFLKILCGIERL 410
Query: 540 NVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTV 598
A ++F+ M GC P + TY L+ C + + A L+ E +KGI Y V
Sbjct: 411 EHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEYRV 469
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 101/519 (19%), Positives = 200/519 (38%), Gaps = 64/519 (12%)
Query: 116 YCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSC 175
YCKC + +P +++ FN LI + E A ++F+ A+ L+L
Sbjct: 92 YCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKL----- 146
Query: 176 NFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS-CG---DIRLAAEILGKIYR 231
+ TY + CG D+ L + G +
Sbjct: 147 ------------------------------DKFTYAGALGFCGERCDLDLGELLHGLVVV 176
Query: 232 SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 291
+G + V I +CG +D A L + + + +N++I G+ + GA E
Sbjct: 177 NGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDER----DQVSWNSLISGYVRVGAAEE 232
Query: 292 ALEVLEEMKSSRTFPDVYSYNMLLNAFC---KKGDVXXXXXXXXXXXXCQIKPSIVNYTS 348
L +L +M Y+ +L A C +G + ++ IV T+
Sbjct: 233 PLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTA 292
Query: 349 LI-LLCKN-KLKGQQLYDKSLEVYNSM-LQNAIRPNTIICNHILRVHCREGQFREALTLL 405
L+ + KN LK +++++++ M +N + N +I + + EA L
Sbjct: 293 LLDMYAKNGSLK------EAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLF 346
Query: 406 EDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKE 465
D +G+ + +++ ++ + ++ + K N S LI +A
Sbjct: 347 MDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALM 406
Query: 466 QSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVS 525
S + ++ F K I ++T++I H + + A+ F ++ S + P+E +
Sbjct: 407 GSTEDGMQ-CFASTSKQDIA----SWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYT 461
Query: 526 YTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 585
+ +++ + ++ + + G T I + K + LA Q+F E++
Sbjct: 462 VSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQ 521
Query: 586 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 624
PDV TY+ +I+ +HG E +F MK + I
Sbjct: 522 N----PDVATYSAMISSLAQHGSANEALNIFESMKTHGI 556
>AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30148738-30149931 FORWARD
LENGTH=397
Length = 397
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 92/213 (43%), Gaps = 5/213 (2%)
Query: 403 TLLEDFHEQ----GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 458
T+ E H+ GI+++ S+N I C+ A M M K + P VV Y+TL
Sbjct: 159 TIWEFLHDAPSKYGIDIDAVSFNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTL 218
Query: 459 ISGFAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSC 518
IS K + + L+ +V G N T+ I R+ A M +
Sbjct: 219 ISALYKHERCV-IGNGLWNLMVLKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQ 277
Query: 519 LCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLAT 578
+ PD ++Y +I F R ++A ++ M G PNL Y +I CK DLA
Sbjct: 278 VEPDSITYNMVIKGFFLARFPDMAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAY 337
Query: 579 QLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 611
+ + RK +P++ T +L+ K G++ +
Sbjct: 338 TMCKDCMRKKWYPNLDTVEMLLKGLVKKGQLDQ 370
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 79/189 (41%), Gaps = 4/189 (2%)
Query: 140 FNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLM 199
FN+ IK F +L+ A+ + GL + + L+ L ++
Sbjct: 180 FNIAIKSFCELGILDGAYMAMREMEKSGLTPDVVTYTTLISALYKHERCVIGNGLWNLMV 239
Query: 200 ETGPLPNIHTYTIMMSCGDIRLAA----EILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 255
G PN+ T+ + + R A ++L + + P +TY I+G + D
Sbjct: 240 LKGCKPNLTTFNVRIQFLVNRRRAWDANDLLLLMPKLQVEPDSITYNMVIKGFFLARFPD 299
Query: 256 VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLL 315
+A ++ +H K + N + +IH C+ G + A + ++ + +P++ + MLL
Sbjct: 300 MAERVYTAMHGKGYKPNLKIYQTMIHYLCKAGNFDLAYTMCKDCMRKKWYPNLDTVEMLL 359
Query: 316 NAFCKKGDV 324
KKG +
Sbjct: 360 KGLVKKGQL 368
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 154/396 (38%), Gaps = 56/396 (14%)
Query: 268 LHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXX 327
LHPL +N +I + + E + + M S PD ++Y +L A + DV
Sbjct: 107 LHPLP---WNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFG 163
Query: 328 XXXXXXXXXCQIKPSIVNYTSLILLCK---NKLKGQQLYDKSLEVYNSMLQNAIRPNTII 384
K S+ +LI + K N ++L+D+ E ++A+ N +I
Sbjct: 164 RVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFE------RDAVSWNAVI 217
Query: 385 CNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRM- 443
+ EG + EA L + G+ ++ ++N I + AL L+ RM
Sbjct: 218 -----NCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMR 272
Query: 444 --------------LKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRLVK-------- 481
LK L G + I G A S+++ ++ + L+
Sbjct: 273 NFPTSLDPVAMIIGLKACSLIGAIRLGKEIHGLAI-HSSYDGIDNVRNTLITMYSKCKDL 331
Query: 482 --AGITFNTK------TYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTALIAVF 533
A I F T+ ++IS + + K +A EM+ + P+ ++ +++ +
Sbjct: 332 RHALIVFRQTEENSLCTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLC 391
Query: 534 CNIREMNVACALFQEMSRIGCLPNLYT--YTCLIDGFCKIDYIDLATQLFDEMKRKGIFP 591
I + + R C + YT + L+D + K I A Q+ D M ++
Sbjct: 392 ARIANLQHGKEFHCYILRRKCFKD-YTMLWNSLVDVYAKSGKIVAAKQVSDLMSKR---- 446
Query: 592 DVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
D VTYT LI Y G G LF EM + I D
Sbjct: 447 DEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPD 482
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 90/455 (19%), Positives = 167/455 (36%), Gaps = 89/455 (19%)
Query: 235 NPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE 294
NP+V+ ++ CEC ++ A KL ++ LN+ +I + ++G +++A+
Sbjct: 115 NPSVLLQNCVLQMYCECRSLEDADKLFDEMS----ELNAVSRTTMISAYAEQGILDKAVG 170
Query: 295 VLEEMKSSRTFPDVYSYNMLLNAFCKKG------DVXXXXXXXXXXXXCQIKPSIVNYTS 348
+ M +S P Y LL + + I+ IVN
Sbjct: 171 LFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVN--- 227
Query: 349 LILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 408
+ + C + ++++D Q A++ + C ++ + + G+ R+AL L D
Sbjct: 228 MYVKCGWLVGAKRVFD----------QMAVK-KPVACTGLMVGYTQAGRARDALKLFVDL 276
Query: 409 HEQGINLNQYSYNEIIHMICK-------------------ESYPKMALELMP-------- 441
+G+ + + ++ ++ ES + L+
Sbjct: 277 VTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSF 336
Query: 442 ----RMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRL-VKAGITFNTKTYTTLI- 495
R + P V++S +ISG+ + S FE + F L K N+ TYT++
Sbjct: 337 ESACRAFQEIREPNDVSWSAIISGYC-QMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQ 395
Query: 496 ------------SIHGRTRKRHKAYCRFGE-----MIQSCLC-------------PDEVS 525
+H KR ++GE M C C PD V+
Sbjct: 396 ACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVA 455
Query: 526 YTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 585
+TA I+ + A LF++M G PN T+ ++ ++ D M
Sbjct: 456 WTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTML 515
Query: 586 RK-GIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
RK + P + Y +I Y + G + E K M
Sbjct: 516 RKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNM 550
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 17/235 (7%)
Query: 397 QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYS 456
+ EA L++ + G++++ YSY + + C+E + R+L + G+ N S
Sbjct: 63 KLNEAFEFLQEMDKAGVSVSSYSY-QCLFEACRE----LRSLSHGRLLHDRMRMGIENPS 117
Query: 457 TLISG----FAKEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFG 512
L+ E + E ++LF + + N + TT+IS + KA F
Sbjct: 118 VLLQNCVLQMYCECRSLEDADKLFDEMSE----LNAVSRTTMISAYAEQGILDKAVGLFS 173
Query: 513 EMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 572
M+ S P YT L+ N R ++ + + R G N T +++ + K
Sbjct: 174 GMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCG 233
Query: 573 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
++ A ++FD+M K V T L+ Y + GR + KLF ++ + D
Sbjct: 234 WLVGAKRVFDQMAVK----KPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWD 284
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/390 (18%), Positives = 162/390 (41%), Gaps = 21/390 (5%)
Query: 232 SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 291
SG + G+ CG + A K+ ++ K + +A++ + ++G + E
Sbjct: 145 SGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK----DVVTCSALLCAYARKGCLEE 200
Query: 292 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL 351
+ +L EM+SS ++ S+N +L+ F + G P V +S++
Sbjct: 201 VVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVL- 259
Query: 352 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFH-- 409
+ ++ + ++ +++ + + + + ++ ++ + G ++L F
Sbjct: 260 ---PSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMM 316
Query: 410 EQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNF 469
E G+ N I + + ALE+ ++ + VV+++++I+G A+ +
Sbjct: 317 EAGV------CNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDI 370
Query: 470 EMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFGEMIQSCLCPDEVSYTAL 529
E +E LF + AG+ N T +++ G G ++ L + +AL
Sbjct: 371 EALE-LFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSAL 429
Query: 530 IAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 589
I ++ +N++ +F M NL + L++GF +F+ + R +
Sbjct: 430 IDMYAKCGRINLSQIVFNMMPT----KNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRL 485
Query: 590 FPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 619
PD +++T L++ + G E K F M
Sbjct: 486 KPDFISFTSLLSACGQVGLTDEGWKYFKMM 515
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 88/191 (46%), Gaps = 8/191 (4%)
Query: 250 ECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 309
+C Y+ L++++ P N +I F + +++ L +L+EMK PDV
Sbjct: 157 DCTYL---TSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVI 213
Query: 310 SYNMLLNAFCKKGDVXXXX-XXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLE 368
+YN +L+ + G V C + +I+ Y +++ N ++ +D L
Sbjct: 214 TYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVL----NGMRKACRFDMCLV 269
Query: 369 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 428
+YN M+Q I P+ + ++ R G +E+L L ++ ++ I + Y Y +I +
Sbjct: 270 IYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLK 329
Query: 429 KESYPKMALEL 439
K + AL+L
Sbjct: 330 KSGDFQSALQL 340
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 1/132 (0%)
Query: 490 TYTTLISIHGRTRKRHKAYCRFGEMIQSC-LCPDEVSYTALIAVFCNIREMNVACALFQE 548
TY +++ I GR ++ M + C + + ++Y ++ ++ ++ E
Sbjct: 214 TYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNE 273
Query: 549 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 608
M + G P+L +YT +ID + + + +LFDEMK++ I P V Y LI K G
Sbjct: 274 MVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGD 333
Query: 609 IGEKNKLFGEMK 620
+L E+K
Sbjct: 334 FQSALQLSDELK 345
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 5/134 (3%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFP-DVYSYNMLLNAFCKKGDVXXXXXXXXXX 334
+N+V+ + G VNE L VL MK + ++ +YN +LN K
Sbjct: 215 YNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEM 274
Query: 335 XXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 394
C I+P +++YT++I + L +SL +++ M Q IRP+ + ++ +
Sbjct: 275 VQCGIEPDLLSYTAVI----DSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKK 330
Query: 395 EGQFREALTLLEDF 408
G F+ AL L ++
Sbjct: 331 SGDFQSALQLSDEL 344
>AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17870064-17871929 REVERSE
LENGTH=621
Length = 621
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 102/251 (40%), Gaps = 15/251 (5%)
Query: 381 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 440
+T+ N LRV R E +++++ G +++ +Y ++ K ++L
Sbjct: 262 STVTYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLY 321
Query: 441 PRMLKRNVLPGVVNYSTLISGFA-KEQSNFEMVERLFTRLVKAGITFNTKTYTTLISIHG 499
M+ P + + S L+ + + ++V R+ + G + + Y IH
Sbjct: 322 EYMMDGPFKPSIQDCSLLLRYLSGSPNPDLDLVFRVSRKYESTGKSLSKAVYD---GIH- 377
Query: 500 RTRKRHKAYCRFGE-------MIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRI 552
+ + RF E M + PD ++Y+ L+ C + + A + +M
Sbjct: 378 ---RSLTSVGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQ 434
Query: 553 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 612
GC P++ T+T LI G CK + +D A F M KG D VLI + H +
Sbjct: 435 GCFPDIKTWTILIQGHCKNNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGA 494
Query: 613 NKLFGEMKANC 623
+ EM N
Sbjct: 495 SIFLMEMVKNA 505
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/347 (21%), Positives = 139/347 (40%), Gaps = 15/347 (4%)
Query: 275 CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 334
+NA + + +V E V++EMK++ D+ +Y + F K +
Sbjct: 265 TYNAALRVLARPNSVAEFWSVVDEMKTAGYDMDLDTYIKVSRQFQKSRMMAETVKLYEYM 324
Query: 335 XXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 394
KPSI + SL+L + L D V + + + I R
Sbjct: 325 MDGPFKPSIQD-CSLLLRYLSGSPNPDL-DLVFRVSRKYESTGKSLSKAVYDGIHRSLTS 382
Query: 395 EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 454
G+F EA + + G + +Y++++ +CK + A ++ +M + P +
Sbjct: 383 VGRFDEAEEITKAMRNAGYEPDNITYSQLVFGLCKAKRLEEARGVLDQMEAQGCFPDIKT 442
Query: 455 YSTLISGFAKEQSNFEMVERL--FTRLVKAGITFNTKTYTTLISIHGRTRKRHKAYCRFG 512
++ LI G K N E+ + L F +++ G ++ LI K A
Sbjct: 443 WTILIQGHCK---NNELDKALACFANMLEKGFDIDSNLLDVLIDGFVIHNKFEGASIFLM 499
Query: 513 EMIQSC-LCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGF-CK 570
EM+++ + P + +Y LI I++ A L Q M + N Y DG+ K
Sbjct: 500 EMVKNANVKPWQSTYKLLIDKLLKIKKSEEALDLLQMMKK----QNYPAYAEAFDGYLAK 555
Query: 571 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE-KNKLF 616
++ A + D + K P Y +I +++ GR+ + KN LF
Sbjct: 556 FGTLEDAKKFLDVLSSKDS-PSFAAYFHVIEAFYREGRLTDAKNLLF 601
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/377 (18%), Positives = 157/377 (41%), Gaps = 34/377 (9%)
Query: 276 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 335
+N+VI + G EAL M+ +P S+ + A D+
Sbjct: 44 WNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAF 103
Query: 336 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 395
+ I ++LI++ K LE + + N + ++R +
Sbjct: 104 VFGYQSDIFVSSALIVMYSTCGK--------LEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 396 GQFREALTLLEDF------HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL 449
G +A++L +D + + L+ +I + + + ++KR
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 450 PGVVNYSTLISGFAKE-QSNFEMVERLFTRLVKAGITFNTKTYTTLISIHGRTRKRHKAY 508
GV +TL+ +AK + + ++F ++V + +Y +++S++ ++ ++A+
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK----DRVSYNSIMSVYAQSGMSNEAF 271
Query: 509 CRFGEMIQSCLCP-DEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDG 567
F ++++ + + ++ + ++ + + + + ++ R+G ++ T +ID
Sbjct: 272 EVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDM 331
Query: 568 FCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 627
+CK ++ A + FD MK K +V ++T +IA Y HG + +LF M +D
Sbjct: 332 YCKCGRVETARKAFDRMKNK----NVRSWTAMIAGYGMHGHAAKALELFPAM------ID 381
Query: 628 DGIKKLQDPKLVQFKNV 644
G++ P + F +V
Sbjct: 382 SGVR----PNYITFVSV 394
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 80/170 (47%), Gaps = 6/170 (3%)
Query: 453 VNYSTLISGFAKEQSNFEMVERLFTRLVKAGI-TFNTKTYTTLISIHGRTRKRHKAYCRF 511
V+Y++++S +A+ + E E +F RLVK + TFN T +T++ + C
Sbjct: 252 VSYNSIMSVYAQSGMSNEAFE-VFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIH 310
Query: 512 GEMIQSCLCPDEVSYTALIAVFCNIREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKI 571
++I+ L D + T++I ++C + A F M N+ ++T +I G+
Sbjct: 311 DQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKN----KNVRSWTAMIAGYGMH 366
Query: 572 DYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 621
+ A +LF M G+ P+ +T+ ++A G E + F MK
Sbjct: 367 GHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKG 416