Miyakogusa Predicted Gene
- Lj3g3v0381620.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0381620.1 Non Chatacterized Hit- tr|K3XV12|K3XV12_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si005769,20.51,2e-18,PPR_2,Pentatricopeptide repeat;
PPR_1,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
seg,NU,gene.g45191.t1.1
(621 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 198 7e-51
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 8e-47
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 2e-44
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 3e-43
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 171 1e-42
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 170 3e-42
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 170 3e-42
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 1e-41
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 165 7e-41
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 165 7e-41
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 7e-41
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 163 4e-40
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 4e-40
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 162 8e-40
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 2e-39
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 160 3e-39
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 160 4e-39
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 159 6e-39
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 157 1e-38
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 156 3e-38
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 8e-38
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 1e-37
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 148 9e-36
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 147 2e-35
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 146 4e-35
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 5e-35
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 145 8e-35
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 2e-34
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 144 3e-34
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 143 4e-34
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 5e-34
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 5e-34
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 6e-34
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 7e-34
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 142 8e-34
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 142 1e-33
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 1e-33
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 140 2e-33
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 140 3e-33
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 4e-33
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 139 5e-33
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 6e-33
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 139 8e-33
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 139 8e-33
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 137 2e-32
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 5e-32
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 5e-32
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 135 8e-32
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 135 8e-32
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 1e-31
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 5e-31
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 6e-31
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 7e-31
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 7e-31
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 132 7e-31
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 7e-31
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 8e-31
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 9e-31
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 1e-30
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 3e-30
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 3e-30
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 130 4e-30
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 7e-30
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 7e-30
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 127 2e-29
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 127 2e-29
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 3e-29
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 127 3e-29
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 6e-29
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 123 3e-28
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 123 3e-28
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 6e-28
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 122 6e-28
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 121 1e-27
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 9e-27
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 118 1e-26
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 5e-26
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 5e-26
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 114 2e-25
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 113 4e-25
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 112 1e-24
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 1e-24
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 112 1e-24
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 110 2e-24
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 3e-24
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 6e-24
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 109 6e-24
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 109 6e-24
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 6e-24
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 108 1e-23
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 108 1e-23
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 1e-23
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 2e-23
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 105 1e-22
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 2e-22
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 4e-22
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 8e-22
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 97 3e-20
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 96 5e-20
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 6e-20
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 1e-19
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 94 2e-19
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 3e-19
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 4e-19
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 92 9e-19
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 2e-18
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 91 2e-18
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 6e-18
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 89 8e-18
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 88 2e-17
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 87 4e-17
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 86 8e-17
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 1e-16
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 5e-16
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 7e-16
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 83 7e-16
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 81 2e-15
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 80 3e-15
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 77 4e-14
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 5e-14
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 9e-14
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 9e-14
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 75 2e-13
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 74 3e-13
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 74 4e-13
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 8e-13
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 72 1e-12
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 2e-12
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 4e-12
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 70 6e-12
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 69 9e-12
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 68 1e-11
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 68 2e-11
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 67 3e-11
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 67 4e-11
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 65 2e-10
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 64 2e-10
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 64 3e-10
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 64 3e-10
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 4e-10
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 62 9e-10
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 61 3e-09
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 3e-09
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 60 4e-09
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 60 4e-09
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 5e-09
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 6e-09
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 8e-09
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 59 1e-08
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 59 1e-08
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 58 2e-08
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 57 4e-08
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 57 5e-08
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 7e-08
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 8e-08
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 9e-08
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 9e-08
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 54 3e-07
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 54 3e-07
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 4e-07
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 53 6e-07
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 53 6e-07
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 8e-07
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 9e-07
AT5G14350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 52 2e-06
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 3e-06
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 5e-06
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 50 6e-06
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 141/525 (26%), Positives = 235/525 (44%), Gaps = 53/525 (10%)
Query: 110 KFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDD----SFEQFST 165
KF +W H F ++ I +H ++ L D+ D+ F+
Sbjct: 67 KFLNWANPHQF-FTLRCKCITLHILTKFKLYKTAQILAEDVAAKTLDDEYASLVFKSLQE 125
Query: 166 LLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKC-LXXXXX 224
DL + + VF++++K ++ S+++ A + A+ G + S N +L +
Sbjct: 126 TYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRN 185
Query: 225 XXXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGT 280
++E+ PN+ TY I++ G+I +A + K+ G P VVTY T
Sbjct: 186 ISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNT 245
Query: 281 YIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSR 340
I G C+ +D KL+R + K N +N VI+G C+ G + E VL EM
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 341 TFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI------------- 387
D +YN L+ +CK+G+ + PS++ YTSLI
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 388 ---------LLCKNKLKGQQLYD---------KSLEVYNSMLQNAIRPNTIICNHILRVH 429
LC N+ L D ++ V M N P+ + N ++ H
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 430 CREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGV 489
C G+ +A+ +LED E+G++ + SY+ ++ C+ AL + M+++ + P
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Query: 490 VNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKI 549
+ YS+LI GF +++ E AC L++EM R+G P+ +TYT LI+ +C
Sbjct: 486 ITYSSLIQGFCEQRRTKE------------ACDLYEEMLRVGLPPDEFTYTALINAYCME 533
Query: 550 DYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
++ A QL +EM KG+ PDVVTY+VLI +K R E +L
Sbjct: 534 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 134/527 (25%), Positives = 231/527 (43%), Gaps = 40/527 (7%)
Query: 108 EKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRD-----------------I 150
E F +E+ S +V + I+I F AG +++V L D I
Sbjct: 190 ENVFKEMLESQ-VSPNVFTYNILIRGFCFAG-NIDVALTLFDKMETKGCLPNVVTYNTLI 247
Query: 151 VGYCK---CDDSFEQFSTL-LDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLE 206
GYCK DD F+ ++ L +++ +NV+I ++ V G
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Query: 207 LHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTI----MMSCGDIRLAAEI 262
L + N L+K ++ G P++ TYT M G++ A E
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 263 LGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQ 322
L ++ G P TY T + G + GY++ A++++R+++ + +NA+I+G C
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 323 RGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVN 382
G + +A+ VLE+MK PDV SY+ +L+ FC+ DV IKP +
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 383 YTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 441
Y+SLI C+ Q+ ++ ++Y ML+ + P+ ++ +C EG +AL L
Sbjct: 488 YSSLIQGFCE-----QRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542
Query: 442 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 501
+ E+G+ + +Y+ +I+ + K+S + A L+ ++ +P V Y TLI +
Sbjct: 543 HNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Query: 502 EQSNFEMVERL-----FTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLAT 556
+ F+ V L M A +F+ M P+ Y +I G C+ I A
Sbjct: 603 IE--FKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAY 660
Query: 557 QLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 603
L+ EM + G VT L+ HK G++ E N + + +C L
Sbjct: 661 TLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCEL 707
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 138/288 (47%), Gaps = 19/288 (6%)
Query: 313 FNAVIHGFCQ-RGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 371
+NAV+ + + ++ A V +EM S+ P+V++YN+L+ FC G++
Sbjct: 172 YNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM 231
Query: 372 XXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 430
P++V Y +LI CK + D ++ SM + PN I N ++ C
Sbjct: 232 ETKGCLPNVVTYNTLIDGYCK-----LRKIDDGFKLLRSMALKGLEPNLISYNVVINGLC 286
Query: 431 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 490
REG+ +E +L + + +G +L++ +YN +I CKE AL + ML+ + P V+
Sbjct: 287 REGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVI 346
Query: 491 NYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 550
Y++LI K + MN A +M G PN TYT L+DGF +
Sbjct: 347 TYTSLIHSMCKAGN------------MNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 551 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
Y++ A ++ EM G P VVTY LI + G++ + + +MK
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMK 442
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 135/293 (46%), Gaps = 19/293 (6%)
Query: 310 SHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK-KGDVXXXXXXX 368
S F+ V+ + + +++AL ++ ++ P V SYN +L+A + K ++
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 369 XXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 427
Q+ P++ Y LI C G D +L +++ M PN + N ++
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFC---FAGN--IDVALTLFDKMETKGCLPNVVTYNTLID 248
Query: 428 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 487
+C+ + + LL +G+ N SYN +I+ +C+E K ++ M +R
Sbjct: 249 GYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL 308
Query: 488 GVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 547
V Y+TLI G+ KE NF A + EM R G P++ TYT LI C
Sbjct: 309 DEVTYNTLIKGYCKE-GNFHQ-----------ALVMHAEMLRHGLTPSVITYTSLIHSMC 356
Query: 548 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 600
K ++ A + D+M+ +G+ P+ TYT L+ + + G + E ++ EM N
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDN 409
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 86/183 (46%), Gaps = 13/183 (7%)
Query: 425 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP-KMALELMPRMLKR 483
+++ + R +AL+++ G SYN ++ + A + ML+
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 484 NVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLI 543
V P V Y+ LI GF F ++VA LF +M GCLPN+ TY LI
Sbjct: 200 QVSPNVFTYNILIRGFC------------FAGNIDVALTLFDKMETKGCLPNVVTYNTLI 247
Query: 544 DGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 603
DG+CK+ ID +L M KG+ P++++Y V+I + GR+ E + + EM
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Query: 604 LDD 606
LD+
Sbjct: 308 LDE 310
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 185 bits (470), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 114/373 (30%), Positives = 193/373 (51%), Gaps = 22/373 (5%)
Query: 235 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
++E PNI+TY M++ G++ A + + KI +G +P TY + I G C+
Sbjct: 209 MLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKD 268
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
+D A K+ ++ K N + +IHG C ++EA+++ +MK FP V +Y +
Sbjct: 269 LDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTV 328
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
L+ + C IKP+I YT LI + L Q ++K+ E+ M
Sbjct: 329 LIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLI----DSLCSQCKFEKARELLGQM 384
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
L+ + PN I N ++ +C+ G +A+ ++E + ++ N +YNE+I CK +
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVH 444
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI 530
K A+ ++ +ML+R VLP VV Y++LI G + NF+ RL + M+
Sbjct: 445 K-AMGVLNKMLERKVLPDVVTYNSLIDGQCR-SGNFDSAYRLLSL-----------MNDR 491
Query: 531 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 590
G +P+ +TYT +ID CK ++ A LFD +++KG+ P+VV YT LI Y K G++ E
Sbjct: 492 GLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEA 551
Query: 591 NKLFGEM-KANCI 602
+ + +M NC+
Sbjct: 552 HLMLEKMLSKNCL 564
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 124/471 (26%), Positives = 219/471 (46%), Gaps = 30/471 (6%)
Query: 137 AGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLP----HHSVLVFNVLIKVFASNSMLEH 192
AG+ + F I+GYC+ D F ++P + + + LI ++
Sbjct: 247 AGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDE 306
Query: 193 AHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS 252
A +FV K+ +R+ L+K L + ETG PNIHTYT+++
Sbjct: 307 AMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLID 366
Query: 253 --CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPL 308
C + A E+LG++ G P V+TY I G C+ G ++ A +V + +
Sbjct: 367 SLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSP 426
Query: 309 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 368
N+ +N +I G+C + V++A+ VL +M + PDV +YN L++ C+ G+
Sbjct: 427 NTRTYNELIKGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLL 485
Query: 369 XXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 427
+ P YTS+I LCK+K +++ ++++S+ Q + PN ++ ++
Sbjct: 486 SLMNDRGLVPDQWTYTSMIDSLCKSK-----RVEEACDLFDSLEQKGVNPNVVMYTALID 540
Query: 428 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 487
+C+ G+ EA +LE + N ++N +IH +C + K A L +M+K + P
Sbjct: 541 GYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600
Query: 488 GVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 547
V + LI K+ + + A + FQ+M G P+ +TYT I +C
Sbjct: 601 TVSTDTILIHRLLKDG------------DFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYC 648
Query: 548 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
+ + A + +M+ G+ PD+ TY+ LI Y G +G+ N F +K
Sbjct: 649 REGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGY---GDLGQTNFAFDVLK 696
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 160/357 (44%), Gaps = 30/357 (8%)
Query: 273 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 332
PTV TY I+ LC A LV+++ N H + +I C + +A E+
Sbjct: 321 PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKAREL 380
Query: 333 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCK 391
L +M P+V +YN L+N +CK+G + ++ P+ Y LI CK
Sbjct: 381 LGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK 440
Query: 392 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 451
+ + K++ V N ML+ + P+ + N ++ CR G F A LL +++G+
Sbjct: 441 SNVH------KAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494
Query: 452 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFE---M 508
+Q++Y +I +CK + A +L + ++ V P VV Y+ LI G+ K E M
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 509 VERLFTR--------------------EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 548
+E++ ++ ++ A L ++M +IG P + T T LI K
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614
Query: 549 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
D A F +M G PD TYT I Y + GR+ + + +M+ N + D
Sbjct: 615 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 110/481 (22%), Positives = 208/481 (43%), Gaps = 30/481 (6%)
Query: 131 IHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLD---LPHHSVLVFNVLIKVFASN 187
IHT+ + L+ + CK + + E +L+ +P+ V+ +N LI +
Sbjct: 358 IHTYTV---------LIDSLCSQCKFEKARELLGQMLEKGLMPN--VITYNALINGYCKR 406
Query: 188 SMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTY 247
M+E A V ++ L + R+ N L+K ++E LP++ TY
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNK-MLERKVLPDVVTY 465
Query: 248 TIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHC 303
++ G+ A +L + G P TY + I LC+ V+ A L L
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Query: 304 KLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXX 363
K N + A+I G+C+ G V+EA +LE+M S P+ ++N L++ C G +
Sbjct: 526 KGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Query: 364 XXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICN 423
++P++ T LI ++L +D + + ML + +P+
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILI----HRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 424 HILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKR 483
++ +CREG+ +A ++ E G++ + ++Y+ +I A +++ RM
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701
Query: 484 NVLPGVVNYSTLIS-----GFAKEQ-SNFEMVERLFTREMNVACALFQEMSRIGCLPNLY 537
P + +LI + K++ S E+ E + L ++M PN
Sbjct: 702 GCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAK 761
Query: 538 TYTCLIDGFCKIDYIDLATQLFDEMKR-KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE 596
+Y LI G C++ + +A ++FD M+R +GI P + + L++ K + E K+ +
Sbjct: 762 SYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDD 821
Query: 597 M 597
M
Sbjct: 822 M 822
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 96/432 (22%), Positives = 165/432 (38%), Gaps = 103/432 (23%)
Query: 237 ETGPLPNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 292
+ G +P+ TYT M+ C R+ A ++ + + G NP VV Y I G C+ G VD
Sbjct: 490 DRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVD 549
Query: 293 VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEE----------------- 335
AH ++ K+ K NS FNA+IHG C G + EA +LEE
Sbjct: 550 EAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT-LLEEKMVKIGLQPTVSTDTIL 608
Query: 336 -------------------MKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQI 376
M SS T PD ++Y + +C++G + +
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Query: 377 KPSIVNYTSLI---------------------LLCK------------------NKLKGQ 397
P + Y+SLI C+ K KG
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGS 728
Query: 398 Q----------LYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHE 447
+ +D +E+ M+++++ PN ++ C G R A + +
Sbjct: 729 EPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQR 788
Query: 448 -QGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNF 506
+GI+ ++ +N ++ CK A +++ M+ LP + + LI G K+
Sbjct: 789 NEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKG--- 845
Query: 507 EMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKG 566
E ++FQ + + G + + +IDG K ++ +LF+ M++ G
Sbjct: 846 ---------EKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNG 896
Query: 567 IFPDVVTYTVLI 578
TY++LI
Sbjct: 897 CKFSSQTYSLLI 908
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/367 (29%), Positives = 186/367 (50%), Gaps = 20/367 (5%)
Query: 243 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 298
N++TY+I+++C + LA +L K+ + G P +VT + + G C + A LV
Sbjct: 115 NLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLV 174
Query: 299 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
++ + +S FN +IHG + +EA+ +++ M PD+ +Y +++N CK+
Sbjct: 175 GQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKR 234
Query: 359 GDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 418
GD+ +I+P +V Y ++I + L + + +L ++ M IRPN
Sbjct: 235 GDIDLALSLLKKMEQGKIEPGVVIYNTII----DALCNYKNVNDALNLFTEMDNKGIRPN 290
Query: 419 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMP 478
+ N ++R C G++ +A LL D E+ IN N +++ +I KE A +L
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 350
Query: 479 RMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYT 538
M+KR++ P + YS+LI+GF M +RL + A +F+ M C PN+ T
Sbjct: 351 EMIKRSIDPDIFTYSSLINGFC-------MHDRL-----DEAKHMFELMISKDCFPNVVT 398
Query: 539 YTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
Y LI GFCK +D +LF EM ++G+ + VTYT LI + + +F +M
Sbjct: 399 YNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMV 458
Query: 599 ANCILLD 605
++ +L D
Sbjct: 459 SDGVLPD 465
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 209/468 (44%), Gaps = 41/468 (8%)
Query: 172 HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXX 231
H++ +++LI F S L A V +G E I + N LL
Sbjct: 114 HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSL 173
Query: 232 XXXLMETGPLPNIHTYTIMMSCGDIR-----LAAEILGKIYRSGGNPTVVTYGTYIRGLC 286
++E G P+ T+ ++ G R A ++ ++ G P +VTYG + GLC
Sbjct: 174 VGQMVEMGYQPDSFTFNTLIH-GLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLC 232
Query: 287 ECGYVDVAHKLVRKL-HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDV 345
+ G +D+A L++K+ K+ P +N +I C VN+AL + EM + P+V
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEP-GVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 291
Query: 346 YSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKL-KGQQLYDK 402
+YN L+ C G +I P++V +++LI + + KL + ++LYD+
Sbjct: 292 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 351
Query: 403 SLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIH 462
M++ +I P+ + ++ C + EA + E + N +YN +I
Sbjct: 352 -------MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIK 404
Query: 463 MICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF--AKEQSNFEMVERLFTRE---- 516
CK +EL M +R ++ V Y+TLI GF A+E N ++V + +
Sbjct: 405 GFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLP 464
Query: 517 -----------------MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLF 559
+ A +F+ + R P++YTY +I+G CK ++ LF
Sbjct: 465 DIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLF 524
Query: 560 DEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDG 607
+ KG+ P+VVTYT +++ + + G E + LF EMK L D G
Sbjct: 525 CSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSG 572
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 109/234 (46%), Gaps = 24/234 (10%)
Query: 392 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 451
N+L +L D ++ ++ M+++ P+ + + +L + +F ++L E GI+
Sbjct: 55 NRLNDLKL-DDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 113
Query: 452 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF------------ 499
N Y+Y+ +I+ C+ S +AL ++ +M+K P +V ++L++GF
Sbjct: 114 HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSL 173
Query: 500 -------AKEQSNF---EMVERLFT-REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 548
+ +F ++ LF + A AL M GC P+L TY +++G CK
Sbjct: 174 VGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK 233
Query: 549 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
IDLA L +M++ I P VV Y +I + + + LF EM I
Sbjct: 234 RGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 109/271 (40%), Gaps = 13/271 (4%)
Query: 142 EVFALLRDIVGYC---KCDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVF 197
++F I G+C + D++ F ++ +V+ +N LIK F ++ ++F
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419
Query: 198 VSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC---- 253
GL + + L+ ++ G LP+I TY+I++
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479
Query: 254 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 313
G + A + + RS P + TY I G+C+ G V+ L L K N +
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539
Query: 314 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 373
++ GFC++G EA + EMK PD +YN L+ A + GD
Sbjct: 540 TTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS 599
Query: 374 CQIKPSIVNYTSLILLCKNKLKGQQLYDKSL 404
C+ V S I L N L +L DKS
Sbjct: 600 CR----FVGDASTIGLVTNMLHDGRL-DKSF 625
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 173 bits (439), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/364 (28%), Positives = 184/364 (50%), Gaps = 20/364 (5%)
Query: 243 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 298
++++Y I+++C + LA +LGK+ + G P +VT + + G C + A LV
Sbjct: 114 DLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALV 173
Query: 299 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
++ + N+ FN +IHG +EA+ +++ M + PD+++Y ++N CK+
Sbjct: 174 DQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
Query: 359 GDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 418
GD+ +I+ +V YT++I + L + + +L ++ M IRPN
Sbjct: 234 GDIDLALSLLKKMEKGKIEADVVIYTTII----DALCNYKNVNDALNLFTEMDNKGIRPN 289
Query: 419 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMP 478
+ N ++R C G++ +A LL D E+ IN N +++ +I KE A +L
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349
Query: 479 RMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYT 538
M+KR++ P + YS+LI+GF M +RL + A +F+ M C PN+ T
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFC-------MHDRL-----DEAKHMFELMISKDCFPNVVT 397
Query: 539 YTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
Y LI GFCK ++ +LF EM ++G+ + VTY LI + G K+F +M
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 599 ANCI 602
++ +
Sbjct: 458 SDGV 461
Score = 147 bits (370), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 117/533 (21%), Positives = 226/533 (42%), Gaps = 83/533 (15%)
Query: 146 LLRDIVGYCKCDDSFEQFSTLL-DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVG 204
L R+++ K DD+ + F ++ P S++ FN L+ A + + + +N+
Sbjct: 51 LSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR 110
Query: 205 LELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL---- 258
+ + S N L+ C +M+ G P+I T + +++ C R+
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170
Query: 259 ---------------------------------AAEILGKIYRSGGNPTVVTYGTYIRGL 285
A ++ ++ G P + TYGT + GL
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230
Query: 286 CECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDV 345
C+ G +D+A L++K+ + + +I C VN+AL + EM + P+V
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290
Query: 346 YSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKL-KGQQLYDK 402
+YN L+ C G +I P++V +++LI + + KL + ++LYD+
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 403 SLE--------VYNS--------------------MLQNAIRPNTIICNHILRVHCREGQ 434
++ Y+S M+ PN + N +++ C+ +
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 435 FREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYST 494
E + L + ++G+ N +YN +I + + MA ++ +M+ V P ++ YS
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 495 LISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDL 554
L+ G K + +E+ A +F+ + + P++YTY +I+G CK ++
Sbjct: 471 LLDGLCK----YGKLEK--------ALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 555 ATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDG 607
LF + KG+ P+V+ YT +I+ + + G E + LF EMK + L + G
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSG 571
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/339 (21%), Positives = 156/339 (46%), Gaps = 11/339 (3%)
Query: 145 ALLRDIVGYCKCDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNV 203
+L+R + Y + D+ S +++ + +V+ F+ LI F L A +++
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 204 GLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--A 259
++ I + + L+ ++ PN+ TY ++ C R+
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 260 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHG 319
E+ ++ + G VTY T I+GL + G D+A K+ +K+ P + ++ ++ G
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 320 FCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPS 379
C+ G + +AL V E ++ S+ PD+Y+YN+++ CK G V +KP+
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 380 IVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREA 438
++ YT++I C+ LK +++ ++ M ++ PN+ N ++R R+G +
Sbjct: 535 VIIYTTMISGFCRKGLK-----EEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 589
Query: 439 LTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
L+++ G + + + +I+M+ K LE++
Sbjct: 590 AELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 628
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 92/435 (21%), Positives = 174/435 (40%), Gaps = 24/435 (5%)
Query: 130 IIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLP----HHSVLVFNVLIKVFA 185
+I G ++F + G CK D S L + V+++ +I
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 266
Query: 186 SNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIH 245
+ + A +F N G+ ++ + N L++CL ++E PN+
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326
Query: 246 TYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKL 301
T++ ++ G + A ++ ++ + +P + TY + I G C +D A + +
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386
Query: 302 HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDV 361
K N +N +I GFC+ V E +E+ EM + +YN L+ + GD
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446
Query: 362 XXXXXXXXXXXXCQIKPSIVNYTSLIL-LCK-NKLKGQQLYDKSLEVYNSMLQNAIRPNT 419
+ P I+ Y+ L+ LCK KL +K+L V+ + ++ + P+
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKL------EKALVVFEYLQKSKMEPDI 500
Query: 420 IICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPR 479
N ++ C+ G+ + L +G+ N Y +I C++ + A L
Sbjct: 501 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFRE 560
Query: 480 MLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTY 539
M + LP Y+TLI ++ E +EM +C + S I + N+
Sbjct: 561 MKEDGTLPNSGTYNTLIRARLRDGDKAASAE--LIKEMR-SCGFVGDASTISMVINM--- 614
Query: 540 TCLIDGFCKIDYIDL 554
L DG + Y+++
Sbjct: 615 --LHDGRLEKSYLEM 627
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 186/365 (50%), Gaps = 22/365 (6%)
Query: 243 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 298
N +TY+I+++C + LA +LGK+ + G P +VT + + G C + A LV
Sbjct: 115 NHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALV 174
Query: 299 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
++ + N+ FN +IHG +EA+ +++ M + PD+ +Y +++N CK+
Sbjct: 175 DQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
Query: 359 GDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 417
GD +++P ++ Y ++I LCK K D +L ++ M IRP
Sbjct: 235 GDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK-----HMDDALNLFKEMETKGIRP 289
Query: 418 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
N + + ++ C G++ +A LL D E+ IN + ++++ +I KE A +L
Sbjct: 290 NVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLY 349
Query: 478 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLY 537
M+KR++ P +V YS+LI+GF M +RL + A +F+ M C P++
Sbjct: 350 DEMVKRSIDPSIVTYSSLINGFC-------MHDRL-----DEAKQMFEFMVSKHCFPDVV 397
Query: 538 TYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
TY LI GFCK ++ ++F EM ++G+ + VTY +LI + G ++F EM
Sbjct: 398 TYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEM 457
Query: 598 KANCI 602
++ +
Sbjct: 458 VSDGV 462
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 183/377 (48%), Gaps = 20/377 (5%)
Query: 235 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
++ G P++ TY ++++ GD LA +L K+ + P V+ Y T I GLC+ +
Sbjct: 212 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 271
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
+D A L +++ K N ++++I C G ++A +L +M + PDV++++
Sbjct: 272 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
L++AF K+G + I PSIV Y+SLI N D++ +++ M
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI----NGFCMHDRLDEAKQMFEFM 387
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
+ P+ + N +++ C+ + E + + + ++G+ N +YN +I + +
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI 530
MA E+ M+ V P ++ Y+TL+ G K ++ A +F+ + R
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG------------KLEKAMVVFEYLQRS 495
Query: 531 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 590
P +YTY +I+G CK ++ LF + KG+ PDVV Y +I+ + + G E
Sbjct: 496 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEA 555
Query: 591 NKLFGEMKANCILLDDG 607
+ LF EMK + L + G
Sbjct: 556 DALFKEMKEDGTLPNSG 572
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 165/370 (44%), Gaps = 43/370 (11%)
Query: 259 AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIH 318
A + G++ +S P+++ + + + + DV L ++ P N + ++ +I+
Sbjct: 65 AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124
Query: 319 GFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKP 378
FC+R + AL VL +M P++ + + LLN +C + +P
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184
Query: 379 SIVNYTSLI--LLCKNK------------LKGQQL-----------------YDKSLEVY 407
+ V + +LI L NK KG Q D + +
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244
Query: 408 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 467
N M Q + P +I N I+ C+ +AL L ++ +GI N +Y+ +I +C
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304
Query: 468 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEM 527
A L+ M++R + P V +S LI F KE ++VE A L+ EM
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG---KLVE---------AEKLYDEM 352
Query: 528 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 587
+ P++ TY+ LI+GFC D +D A Q+F+ M K FPDVVTY LI + K+ R+
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412
Query: 588 GEKNKLFGEM 597
E ++F EM
Sbjct: 413 EEGMEVFREM 422
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 162/362 (44%), Gaps = 32/362 (8%)
Query: 236 MET-GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
MET G PN+ TY+ ++SC G A+ +L + NP V T+ I + G
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
+ A KL ++ + + ++++I+GFC ++EA ++ E M S FPDV +YN
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNT 401
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLY-----DKSLE 405
L+ FCK V + + V Y LI Q L+ D + E
Sbjct: 402 LIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILI---------QGLFQAGDCDMAQE 452
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
++ M+ + + PN + N +L C+ G+ +A+ + E + Y+YN +I +C
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512
Query: 466 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQ 525
K + +L + + V P VV Y+T+ISGF ++ S E A ALF+
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE------------ADALFK 560
Query: 526 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
EM G LPN Y LI + + + +L EM+ G D T ++ H G
Sbjct: 561 EMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH-DG 619
Query: 586 RI 587
R+
Sbjct: 620 RL 621
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 100/467 (21%), Positives = 192/467 (41%), Gaps = 50/467 (10%)
Query: 119 GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIV----------------GYCKCDDSFEQ 162
G+ + F +IH + E AL+ +V G CK D+
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 163 FSTLLDLPHH----SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKC 218
F+ L + VL++N +I ++ A +F + G+ ++ + + L+ C
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 219 LXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPT 274
L ++E P++ T++ ++ G + A ++ ++ + +P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360
Query: 275 VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF------NAVIHGFCQRGAVNE 328
+VTY + I G C +D A ++ + K HCF N +I GFC+ V E
Sbjct: 361 IVTYSSLINGFCMHDRLDEAKQMFEFMVSK------HCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 329 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI- 387
+EV EM + +YN+L+ + GD + P+I+ Y +L+
Sbjct: 415 GMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474
Query: 388 LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHE 447
LCKN G+ +K++ V+ + ++ + P N ++ C+ G+ + L +
Sbjct: 475 GLCKN---GK--LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 529
Query: 448 QGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFE 507
+G+ + +YN +I C++ + A L M + LP Y+TLI ++
Sbjct: 530 KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREA 589
Query: 508 MVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDL 554
E +EM +C + S IG + N+ L DG ++D+
Sbjct: 590 SAE--LIKEMR-SCGFAGDASTIGLVTNM-----LHDGRLDKSFLDM 628
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/339 (19%), Positives = 148/339 (43%), Gaps = 11/339 (3%)
Query: 145 ALLRDIVGYCKCDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNV 203
+L+ + Y + D+ S +++ + V F+ LI F L A +++
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKR 355
Query: 204 GLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--A 259
++ I + + L+ ++ P++ TY ++ C R+
Sbjct: 356 SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEG 415
Query: 260 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHG 319
E+ ++ + G VTY I+GL + G D+A ++ +++ P N +N ++ G
Sbjct: 416 MEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDG 475
Query: 320 FCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPS 379
C+ G + +A+ V E ++ S+ P +Y+YN+++ CK G V +KP
Sbjct: 476 LCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPD 535
Query: 380 IVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREA 438
+V Y ++I C+ KG + +++ ++ M ++ PN+ N ++R R+G +
Sbjct: 536 VVAYNTMISGFCR---KGSK--EEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREAS 590
Query: 439 LTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
L+++ G + + + +M+ K L+++
Sbjct: 591 AELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 629
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 118/267 (44%), Gaps = 59/267 (22%)
Query: 389 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 448
L +N L +L D ++ ++ M+++ P+ I + +L + +F ++L E
Sbjct: 52 LSRNGLSELKL-DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110
Query: 449 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFE- 507
GI N Y+Y+ +I+ C+ S +AL ++ +M+K P +V S+L++G+ + E
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170
Query: 508 --MVERLFT--------------------REMNVACALFQEMSRIGCLPNLYT------- 538
+V+++F + + A AL M GC P+L T
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNG 230
Query: 539 ----------------------------YTCLIDGFCKIDYIDLATQLFDEMKRKGIFPD 570
Y +IDG CK ++D A LF EM+ KGI P+
Sbjct: 231 LCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPN 290
Query: 571 VVTYTVLIAWYHKHGRIGEKNKLFGEM 597
VVTY+ LI+ +GR + ++L +M
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDM 317
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 113/426 (26%), Positives = 192/426 (45%), Gaps = 20/426 (4%)
Query: 176 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 235
VF++LI+ + L AH+ F ++ G + I +CN L+ L +
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 236 METGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 291
+G N++T IM++ G + L ++ G P +VTY T I G +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 292 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 351
+ A +L+ + K + +N VI+G C+ G A EV EM S PD +Y L
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 352 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML 411
L CKKGDV + P +V ++S++ L DK+L +NS+
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGN----LDKALMYFNSVK 402
Query: 412 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 471
+ + P+ +I +++ +CR+G A+ L + +QG ++ +YN I+H +CK
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 472 MALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIG 531
A +L M +R + P + LI G K + A LFQ+M
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCK------------LGNLQNAMELFQKMKEKR 510
Query: 532 CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKN 591
++ TY L+DGF K+ ID A +++ +M K I P ++Y++L+ G + E
Sbjct: 511 IRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAF 570
Query: 592 KLFGEM 597
+++ EM
Sbjct: 571 RVWDEM 576
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/511 (21%), Positives = 210/511 (41%), Gaps = 37/511 (7%)
Query: 102 NWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFE 161
+ K+ + F S V+ G + + +I ++ G+ E F L+ + G +
Sbjct: 248 DGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG--------K 299
Query: 162 QFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXX 221
FS V +N +I + E A +VF GL + LL
Sbjct: 300 GFSP-------GVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 352
Query: 222 XXXXXXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVT 277
+ +P++ ++ MMS G++ A + +G P V
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412
Query: 278 YGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMK 337
Y I+G C G + VA L ++ + ++ +N ++HG C+R + EA ++ EM
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472
Query: 338 SSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQ 397
FPD Y+ +L++ CK G++ +I+ +V Y +L+ +
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL----DGFGKV 528
Query: 398 QLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSY 457
D + E++ M+ I P I + ++ C +G EA + ++ + I
Sbjct: 529 GDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMIC 588
Query: 458 NEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREM 517
N +I C+ + +M+ +P ++Y+TLI GF +E++ M
Sbjct: 589 NSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN------------M 636
Query: 518 NVACALFQEM--SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYT 575
+ A L ++M + G +P+++TY ++ GFC+ + + A + +M +G+ PD TYT
Sbjct: 637 SKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYT 696
Query: 576 VLIAWYHKHGRIGEKNKLFGEMKANCILLDD 606
+I + + E ++ EM DD
Sbjct: 697 CMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 181/369 (49%), Gaps = 25/369 (6%)
Query: 235 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
L +G +P++ TY +M+S G+I A +L ++ S P VVTY T +R LC+ G
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGK 219
Query: 291 VDVAHKLV-RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 349
+ A +++ R L +P + + +I C+ V A+++L+EM+ PDV +YN
Sbjct: 220 LKQAMEVLDRMLQRDCYP-DVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYN 278
Query: 350 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNS 409
+L+N CK+G + +P+++ + I+L G+ + + L
Sbjct: 279 VLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHN--IILRSMCSTGRWMDAEKL--LAD 334
Query: 410 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 469
ML+ P+ + N ++ CR+G A+ +LE + G N SYN ++H CKE
Sbjct: 335 MLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKK 394
Query: 470 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSR 529
A+E + RM+ R P +V Y+T+++ K+ + VE + ++S
Sbjct: 395 MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVE------------ILNQLSS 442
Query: 530 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 589
GC P L TY +IDG K A +L DEM+ K + PD +TY+ L+ + G++ E
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 590 KNKLFGEMK 598
K F E +
Sbjct: 503 AIKFFHEFE 511
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 177/365 (48%), Gaps = 23/365 (6%)
Query: 239 GPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
G +P+I T ++ G R AA+IL + SG P V+TY I G C+ G ++ A
Sbjct: 132 GNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNA 191
Query: 295 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 354
++ ++ + +N ++ C G + +A+EVL+ M +PDV +Y +L+ A
Sbjct: 192 LSVLDRMSVSPDVVT---YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEA 248
Query: 355 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 414
C+ V P +V Y L+ N + + D++++ N M +
Sbjct: 249 TCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV----NGICKEGRLDEAIKFLNDMPSSG 304
Query: 415 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 474
+PN I N ILR C G++ +A LL D +G + + ++N +I+ +C++ A+
Sbjct: 305 CQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAI 364
Query: 475 ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLP 534
+++ +M + P ++Y+ L+ GF KE ++M+ A + M GC P
Sbjct: 365 DILEKMPQHGCQPNSLSYNPLLHGFCKE------------KKMDRAIEYLERMVSRGCYP 412
Query: 535 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
++ TY ++ CK ++ A ++ +++ KG P ++TY +I K G+ G+ KL
Sbjct: 413 DIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLL 472
Query: 595 GEMKA 599
EM+A
Sbjct: 473 DEMRA 477
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 162/351 (46%), Gaps = 21/351 (5%)
Query: 250 MMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLN 309
M+ G++ + L + G P ++ T IRG C G A K++ L +
Sbjct: 112 MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPD 171
Query: 310 SHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXX 369
+N +I G+C+ G +N AL VL+ M S PDV +YN +L + C G +
Sbjct: 172 VITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 370 XXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRV 428
P ++ YT LI C++ G ++++ + M P+ + N ++
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGH-----AMKLLDEMRDRGCTPDVVTYNVLVNG 283
Query: 429 HCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPG 488
C+EG+ EA+ L D G N ++N I+ +C A +L+ ML++ P
Sbjct: 284 ICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPS 343
Query: 489 VVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 548
VV ++ LI NF + L R +++ ++M + GC PN +Y L+ GFCK
Sbjct: 344 VVTFNILI--------NFLCRKGLLGRAIDI----LEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 549 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 599
+D A + + M +G +PD+VTY ++ K G++ + ++ ++ +
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 177/384 (46%), Gaps = 33/384 (8%)
Query: 242 PNIHTY-TIMMS---CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 297
P++ TY TI+ S G ++ A E+L ++ + P V+TY I C V A KL
Sbjct: 202 PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKL 261
Query: 298 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 357
+ ++ + + +N +++G C+ G ++EA++ L +M SS P+V ++N++L + C
Sbjct: 262 LDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCS 321
Query: 358 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIR 416
G PS+V + LI LC+ L G +++++ M Q+ +
Sbjct: 322 TGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLG-----RAIDILEKMPQHGCQ 376
Query: 417 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 476
PN++ N +L C+E + A+ LE +G + +YN ++ +CK+ + A+E+
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 477 MPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL---------------------FTR 515
+ ++ + P ++ Y+T+I G AK + ++ L +R
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 516 EMNV--ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVT 573
E V A F E R+G PN T+ ++ G CK D A M +G P+ +
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETS 556
Query: 574 YTVLIAWYHKHGRIGEKNKLFGEM 597
YT+LI G E +L E+
Sbjct: 557 YTILIEGLAYEGMAKEALELLNEL 580
Score = 135 bits (341), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 168/373 (45%), Gaps = 9/373 (2%)
Query: 145 ALLRDIVGYCKCDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNV 203
+LR + K + E +L + V+ + +LI+ +S + HA ++ ++
Sbjct: 209 TILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR 268
Query: 204 GLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTI----MMSCGDIRLA 259
G + + N L+ + + +G PN+ T+ I M S G A
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328
Query: 260 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHG 319
++L + R G +P+VVT+ I LC G + A ++ K+ NS +N ++HG
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHG 388
Query: 320 FCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPS 379
FC+ ++ A+E LE M S +PD+ +YN +L A CK G V P
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448
Query: 380 IVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREAL 439
++ Y ++I + L K++++ + M ++P+TI + ++ REG+ EA+
Sbjct: 449 LITYNTVI----DGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Query: 440 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 499
+F GI N ++N I+ +CK A++ + M+ R P +Y+ LI G
Sbjct: 505 KFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Query: 500 AKEQSNFEMVERL 512
A E E +E L
Sbjct: 565 AYEGMAKEALELL 577
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 100/452 (22%), Positives = 196/452 (43%), Gaps = 42/452 (9%)
Query: 150 IVGYCKCDDSFEQFSTLLDLPHHS-----VLVFNVLIKVFASNSMLEHAHQVFVSAKNVG 204
I G+C+ + + + +L++ S V+ +NV+I + + +A V +
Sbjct: 144 IRGFCRLGKT-RKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL---DRMS 199
Query: 205 LELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM--SCGD--IRLAA 260
+ + + N +L+ L +++ P++ TYTI++ +C D + A
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAM 259
Query: 261 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 320
++L ++ G P VVTY + G+C+ G +D A K + + N N ++
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319
Query: 321 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 380
C G +A ++L +M P V ++N+L+N C+KG + +P+
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNS 379
Query: 381 VNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREAL 439
++Y L+ CK K D+++E M+ P+ + N +L C++G+ +A+
Sbjct: 380 LSYNPLLHGFCKEKK-----MDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434
Query: 440 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 499
+L +G + +YN +I + K A++L+ M +++ P + YS+L+ G
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 500 AKEQSNFEMV------ERLF-----------------TREMNVACALFQEMSRIGCLPNL 536
++E E + ER+ +R+ + A M GC PN
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNE 554
Query: 537 YTYTCLIDGFCKIDYIDLATQLFDEMKRKGIF 568
+YT LI+G A +L +E+ KG+
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNELCNKGLM 586
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 93/187 (49%), Gaps = 21/187 (11%)
Query: 417 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 476
P+ I C ++R CR G+ R+A +LE G + +YN +I CK AL +
Sbjct: 135 PDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSV 194
Query: 477 MPRMLKRNVLPGVVNYSTLISGF---AKEQSNFEMVERLFTREMNVACALFQEMSRIGCL 533
+ RM +V P VV Y+T++ K + E+++R+ R+ C
Sbjct: 195 LDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD---------------CY 236
Query: 534 PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL 593
P++ TYT LI+ C+ + A +L DEM+ +G PDVVTY VL+ K GR+ E K
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 594 FGEMKAN 600
+M ++
Sbjct: 297 LNDMPSS 303
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 2/102 (1%)
Query: 488 GVVNYSTLISGFAKE--QSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDG 545
G +YS++ S FA E +SN + + + T E+ + M G +P++ T LI G
Sbjct: 87 GNGHYSSVNSSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRG 146
Query: 546 FCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 587
FC++ A ++ + ++ G PDV+TY V+I+ Y K G I
Sbjct: 147 FCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEI 188
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 142/543 (26%), Positives = 222/543 (40%), Gaps = 67/543 (12%)
Query: 94 VVRVIKSLNWKIAREKKFGSWVET-HGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVG 152
V RV+ L KF W T +GF HSV + I+ H A M+ + ++L+++V
Sbjct: 111 VPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMV- 169
Query: 153 YCKCD-DSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRS 211
K D D F+ + ++ VF+ L V MLE A Q F K + RS
Sbjct: 170 LSKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRS 229
Query: 212 CNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIY 267
CN LL ++ G P + TY IM+ C GD+ A + ++
Sbjct: 230 CNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMK 289
Query: 268 RSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVN 327
G P VTY + I G + G +D ++ + +NA+I+ FC+ G +
Sbjct: 290 FRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLP 349
Query: 328 EALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI 387
LE EMK + P+V SY+ L++AFCK+G
Sbjct: 350 IGLEFYREMKGNGLKPNVVSYSTLVDAFCKEG---------------------------- 381
Query: 388 LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHE 447
+ ++++ Y M + + PN ++ +C+ G +A L + +
Sbjct: 382 -----------MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQ 430
Query: 448 QGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFE 507
G+ N +Y +I +C K A EL +M V+P + +Y+ LI GF K
Sbjct: 431 VGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK------ 484
Query: 508 MVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 567
+ M+ A L E+ G P+L Y I G C ++ I+ A + +EMK GI
Sbjct: 485 ------AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGI 538
Query: 568 FPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK---------ANCILLDDGIKKLQDPKLVQ 618
+ + YT L+ Y K G E L EMK C+L+D K K V
Sbjct: 539 KANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVD 598
Query: 619 FMN 621
+ N
Sbjct: 599 YFN 601
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 188/448 (41%), Gaps = 28/448 (6%)
Query: 155 KCDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCN 213
+ DD+ F + D+ V+ +N LI F L + + K GL+ ++ S +
Sbjct: 312 RLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYS 371
Query: 214 FLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRS 269
L+ + G +PN +TYT ++ G++ A + ++ +
Sbjct: 372 TLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQV 431
Query: 270 GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEA 329
G VVTY I GLC+ + A +L K+ N +NA+IHGF + ++ A
Sbjct: 432 GVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRA 491
Query: 330 LEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-- 387
LE+L E+K PD+ Y + C + C IK + + YT+L+
Sbjct: 492 LELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDA 551
Query: 388 -LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF- 445
N +G L D+ E+ I + ++ C+ +A+
Sbjct: 552 YFKSGNPTEGLHLLDEMKEL-------DIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 446 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN 505
++ G+ N + +I +CK++ + A L +M+++ ++P Y++L+ G K+ +
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 506 FEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK 565
E A AL +M+ IG +L YT L+ G + + A +EM +
Sbjct: 665 LE------------ALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGE 712
Query: 566 GIFPDVVTYTVLIAWYHKHGRIGEKNKL 593
GI PD V ++ +++ G I E +L
Sbjct: 713 GIHPDEVLCISVLKKHYELGCIDEAVEL 740
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 202/457 (44%), Gaps = 31/457 (6%)
Query: 158 DSFEQFSTLLDLPHHSV----LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCN 213
DSF QF LL + VF+V +V +L A +VF N GL L + SCN
Sbjct: 155 DSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCN 214
Query: 214 -FLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYR 268
+L + E G N+ +Y I++ G I+ A +L +
Sbjct: 215 VYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMEL 274
Query: 269 SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 328
G P V++Y T + G C G +D KL+ + K NS+ + ++I C+ + E
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334
Query: 329 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL 388
A E EM PD Y L++ FCK+GD+ I P ++ YT++I
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 389 -LCKNKLKGQQLYD--KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 445
C Q+ D ++ ++++ M + P+++ ++ +C+ G ++A +
Sbjct: 395 GFC-------QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 446 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN 505
+ G + N +Y +I +CKE A EL+ M K + P + Y+++++G K +
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 506 FEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK 565
E V+ L E G + TYT L+D +CK +D A ++ EM K
Sbjct: 508 EEAVK------------LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 566 GIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
G+ P +VT+ VL+ + HG + + KL M A I
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 175/378 (46%), Gaps = 20/378 (5%)
Query: 235 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
++ G LP+ YT ++ GDIR A++ +++ P V+TY I G C+ G
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
+ A KL ++ CK +S F +I+G+C+ G + +A V M + P+V +Y
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
L++ CK+GD+ ++P+I Y S++ N L ++++++
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV----NGLCKSGNIEEAVKLVGEF 517
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
+ +T+ ++ +C+ G+ +A +L++ +G+ ++N +++ C
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI 530
+ +L+ ML + + P +++L+ + + A A++++M
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYC------------IRNNLKAATAIYKDMCSR 625
Query: 531 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 590
G P+ TY L+ G CK + A LF EMK KG V TY+VLI + K + E
Sbjct: 626 GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 685
Query: 591 NKLFGEMKANCILLDDGI 608
++F +M+ + D I
Sbjct: 686 REVFDQMRREGLAADKEI 703
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 136/342 (39%), Gaps = 72/342 (21%)
Query: 235 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
+++ G PN+ TYT ++ GD+ A E+L ++++ G P + TY + + GLC+ G
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
++ A KLV + ++ + ++ +C+ G +++A E+L+EM P + ++N+
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
L+N FC G + + ++ N M
Sbjct: 567 LMNGFCLHG---------------------------------------MLEDGEKLLNWM 587
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
L I PN N +++ +C + A + +D +G+ + +Y ++ CK
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI 530
K A L M + V YS LI GF K + E E +F +M R
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE------------VFDQMRRE 695
Query: 531 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
G + + F + K KG PD +
Sbjct: 696 GLAADKEIF-----------------DFFSDTKYKGKRPDTI 720
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 202/457 (44%), Gaps = 31/457 (6%)
Query: 158 DSFEQFSTLLDLPHHSV----LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCN 213
DSF QF LL + VF+V +V +L A +VF N GL L + SCN
Sbjct: 155 DSFVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCN 214
Query: 214 -FLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYR 268
+L + E G N+ +Y I++ G I+ A +L +
Sbjct: 215 VYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMEL 274
Query: 269 SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 328
G P V++Y T + G C G +D KL+ + K NS+ + ++I C+ + E
Sbjct: 275 KGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAE 334
Query: 329 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL 388
A E EM PD Y L++ FCK+GD+ I P ++ YT++I
Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIIS 394
Query: 389 -LCKNKLKGQQLYD--KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 445
C Q+ D ++ ++++ M + P+++ ++ +C+ G ++A +
Sbjct: 395 GFC-------QIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHM 447
Query: 446 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN 505
+ G + N +Y +I +CKE A EL+ M K + P + Y+++++G K +
Sbjct: 448 IQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNI 507
Query: 506 FEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK 565
E V+ L E G + TYT L+D +CK +D A ++ EM K
Sbjct: 508 EEAVK------------LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 566 GIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
G+ P +VT+ VL+ + HG + + KL M A I
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 592
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 175/378 (46%), Gaps = 20/378 (5%)
Query: 235 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
++ G LP+ YT ++ GDIR A++ +++ P V+TY I G C+ G
Sbjct: 342 MIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGD 401
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
+ A KL ++ CK +S F +I+G+C+ G + +A V M + P+V +Y
Sbjct: 402 MVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTT 461
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
L++ CK+GD+ ++P+I Y S++ N L ++++++
Sbjct: 462 LIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIV----NGLCKSGNIEEAVKLVGEF 517
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
+ +T+ ++ +C+ G+ +A +L++ +G+ ++N +++ C
Sbjct: 518 EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGML 577
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI 530
+ +L+ ML + + P +++L+ + + A A++++M
Sbjct: 578 EDGEKLLNWMLAKGIAPNATTFNSLVKQYC------------IRNNLKAATAIYKDMCSR 625
Query: 531 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 590
G P+ TY L+ G CK + A LF EMK KG V TY+VLI + K + E
Sbjct: 626 GVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEA 685
Query: 591 NKLFGEMKANCILLDDGI 608
++F +M+ + D I
Sbjct: 686 REVFDQMRREGLAADKEI 703
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 136/342 (39%), Gaps = 72/342 (21%)
Query: 235 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
+++ G PN+ TYT ++ GD+ A E+L ++++ G P + TY + + GLC+ G
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
++ A KLV + ++ + ++ +C+ G +++A E+L+EM P + ++N+
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
L+N FC G + + ++ N M
Sbjct: 567 LMNGFCLHG---------------------------------------MLEDGEKLLNWM 587
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
L I PN N +++ +C + A + +D +G+ + +Y ++ CK
Sbjct: 588 LAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNM 647
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI 530
K A L M + V YS LI GF K + E E +F +M R
Sbjct: 648 KEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEARE------------VFDQMRRE 695
Query: 531 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
G + + F + K KG PD +
Sbjct: 696 GLAADKEIF-----------------DFFSDTKYKGKRPDTI 720
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 111/460 (24%), Positives = 216/460 (46%), Gaps = 23/460 (5%)
Query: 155 KCDDSFEQFSTLL-DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCN 213
K DD+ + F ++ P +V+ FN L A E + ++ G+ I + +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 214 FLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--AAEILGKIYRS 269
++ C +M+ G P+ + +++ C + R+ A E++ ++
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 270 GGNPTVVTYGTYIRGLCECGYVDVAHKLV-RKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 328
G PT++T T + GLC G V A L+ R + P N + V++ C+ G
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQP-NEVTYGPVLNVMCKSGQTAL 246
Query: 329 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL 388
A+E+L +M+ D Y+++++ CK G + K I+ Y +LI
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI- 305
Query: 389 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 448
+D ++ M++ I PN + + ++ +EG+ REA LL++ ++
Sbjct: 306 ---GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR 362
Query: 449 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEM 508
GI N +YN +I CKE+ + A++++ M+ + P ++ ++ LI+G+ K
Sbjct: 363 GIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK------- 415
Query: 509 VERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIF 568
++ LF+EMS G + N TY L+ GFC+ +++A +LF EM + +
Sbjct: 416 -----ANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVR 470
Query: 569 PDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 608
PD+V+Y +L+ +G + + ++FG+++ + + LD GI
Sbjct: 471 PDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 200/440 (45%), Gaps = 24/440 (5%)
Query: 172 HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXX 231
HS+ +++I F L +A +G E N LL L
Sbjct: 121 HSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALEL 180
Query: 232 XXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE 287
++E G P + T +++ G + A ++ ++ +G P VTYG + +C+
Sbjct: 181 VDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCK 240
Query: 288 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 347
G +A +L+RK+ + L++ ++ +I G C+ G+++ A + EM+ D+ +
Sbjct: 241 SGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIT 300
Query: 348 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLE 405
YN L+ FC G +I P++V ++ LI + + KL+ ++ +
Sbjct: 301 YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLR------EADQ 354
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
+ M+Q I PNTI N ++ C+E + EA+ +++ +G + + ++N +I+ C
Sbjct: 355 LLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYC 414
Query: 466 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQ 525
K + LEL M R V+ V Y+TL+ GF + + ++ VA LFQ
Sbjct: 415 KANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ------------SGKLEVAKKLFQ 462
Query: 526 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
EM P++ +Y L+DG C ++ A ++F ++++ + D+ Y ++I
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNAS 522
Query: 586 RIGEKNKLFGEMKANCILLD 605
++ + LF + + LD
Sbjct: 523 KVDDAWDLFCSLPLKGVKLD 542
Score = 127 bits (319), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 124/550 (22%), Positives = 221/550 (40%), Gaps = 95/550 (17%)
Query: 115 VETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTL---LDLPH 171
+E+ G +HS+ I+I+ F C+C FST+ + L +
Sbjct: 114 MESKGIAHSIYTLSIMINCF-------------------CRCRKLSYAFSTMGKIMKLGY 154
Query: 172 H-SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXX 230
++FN L+ + A ++ +G + + + N L+ L
Sbjct: 155 EPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVV 214
Query: 231 XXXXLMETGPLPNIHTY----TIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLC 286
++ETG PN TY +M G LA E+L K+ V Y I GLC
Sbjct: 215 LIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274
Query: 287 ECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 346
+ G +D A L ++ K + +N +I GFC G ++ ++L +M + P+V
Sbjct: 275 KDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 347 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLE 405
++++L+++F K+G + I P+ + Y SLI CK + +++++
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCK-----ENRLEEAIQ 389
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
+ + M+ P+ + N ++ +C+ + + L L + +G+ N +YN ++ C
Sbjct: 390 MVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFC 449
Query: 466 KESYPKMALELMPRMLKRNVLPGVVNYSTLISG-------------FAK-EQSNFEM--- 508
+ ++A +L M+ R V P +V+Y L+ G F K E+S E+
Sbjct: 450 QSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIG 509
Query: 509 --------------VE--------------RLFTREMNV-------------ACALFQEM 527
V+ +L R N+ A LF++M
Sbjct: 510 IYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM 569
Query: 528 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 587
+ G P+ TY LI D A +L +EMK G DV T ++I
Sbjct: 570 TEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSS---- 625
Query: 588 GEKNKLFGEM 597
GE +K F +M
Sbjct: 626 GELDKSFLDM 635
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 180/365 (49%), Gaps = 22/365 (6%)
Query: 243 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 298
++TY I+++C I LA +LGK+ + G P++VT + + G C + A LV
Sbjct: 119 GLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV 178
Query: 299 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
++ + ++ F +IHG +EA+ +++ M P++ +Y +++N CK+
Sbjct: 179 DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
Query: 359 GDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 417
GD +I+ +V + ++I LCK + D +L ++ M IRP
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK-----YRHVDDALNLFKEMETKGIRP 293
Query: 418 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
N + + ++ C G++ +A LL D E+ IN N ++N +I KE A +L
Sbjct: 294 NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLY 353
Query: 478 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLY 537
M+KR++ P + Y++L++GF M +RL + A +F+ M C P++
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFC-------MHDRL-----DKAKQMFEFMVSKDCFPDVV 401
Query: 538 TYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
TY LI GFCK ++ T+LF EM +G+ D VTYT LI G K+F +M
Sbjct: 402 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 461
Query: 598 KANCI 602
++ +
Sbjct: 462 VSDGV 466
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 219/466 (46%), Gaps = 23/466 (4%)
Query: 146 LLRDIVGYCKCDDSFEQFSTLL-DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVG 204
+LR+ + K DD+ F ++ P S++ FN L+ A + + + +
Sbjct: 56 ILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLE 115
Query: 205 LELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--AA 260
+ + + N L+ C +M+ G P+I T + +++ C R+ A
Sbjct: 116 IVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAV 175
Query: 261 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 320
++ ++ G P +T+ T I GL A LV ++ + N + V++G
Sbjct: 176 ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGL 235
Query: 321 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 380
C+RG + AL +L +M++++ DV +N ++++ CK V I+P++
Sbjct: 236 CKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNV 295
Query: 381 VNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREAL 439
V Y+SLI LC + + ++ + M++ I PN + N ++ +EG+F EA
Sbjct: 296 VTYSSLISCLCS-----YGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 440 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 499
L +D ++ I+ + ++YN +++ C A ++ M+ ++ P VV Y+TLI GF
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 500 AKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLF 559
K ++ + LF+EMS G + + TYT LI G D A ++F
Sbjct: 411 CK------------SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVF 458
Query: 560 DEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
+M G+ PD++TY++L+ +G++ + ++F M+ + I LD
Sbjct: 459 KQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLD 504
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/464 (22%), Positives = 197/464 (42%), Gaps = 33/464 (7%)
Query: 172 HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXX 231
H + +N+LI F S + A + +G E I + + LL
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 232 XXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE 287
++E G P+ T+T ++ A ++ ++ + G P +VTYG + GLC+
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 288 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 347
G D+A L+ K+ + FN +I C+ V++AL + +EM++ P+V +
Sbjct: 238 RGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 297
Query: 348 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVY 407
Y+ L++ C G +I P++V + +LI + + + ++ ++Y
Sbjct: 298 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI----DAFVKEGKFVEAEKLY 353
Query: 408 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 467
+ M++ +I P+ N ++ C + +A + E + + +YN +I CK
Sbjct: 354 DDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKS 413
Query: 468 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTR------------ 515
+ EL M R ++ V Y+TLI G + + + +++F +
Sbjct: 414 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD-GDCDNAQKVFKQMVSDGVPPDIMT 472
Query: 516 ------------EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 563
++ A +F M + ++Y YT +I+G CK +D LF +
Sbjct: 473 YSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLS 532
Query: 564 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDG 607
KG+ P+VVTY +I+ + E L +MK + L + G
Sbjct: 533 LKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/362 (26%), Positives = 158/362 (43%), Gaps = 32/362 (8%)
Query: 236 MET-GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
MET G PN+ TY+ ++SC G A+++L + NP +VT+ I + G
Sbjct: 286 METKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGK 345
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
A KL + + + +N++++GFC +++A ++ E M S FPDV +YN
Sbjct: 346 FVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNT 405
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLY-----DKSLE 405
L+ FCK V + V YT+LI Q L+ D + +
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI---------QGLFHDGDCDNAQK 456
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
V+ M+ + + P+ + + +L C G+ +AL + + + I L+ Y Y +I +C
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 516
Query: 466 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQ 525
K +L + + V P VV Y+T+ISG + R + A AL +
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSK------------RLLQEAYALLK 564
Query: 526 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
+M G LPN TY LI + + +L EM+ D T ++ H G
Sbjct: 565 KMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANMLH-DG 623
Query: 586 RI 587
R+
Sbjct: 624 RL 625
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 127/287 (44%), Gaps = 69/287 (24%)
Query: 391 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 450
+N L +L D ++ ++ M+++ P+ + N +L + +F ++L E I
Sbjct: 58 RNGLHDMKL-DDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEI 116
Query: 451 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF--AKEQSNF-- 506
Y+YN +I+ C+ S +AL L+ +M+K P +V S+L++G+ K S+
Sbjct: 117 VHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 507 ---EMVER-------LFT---------REMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 547
+MVE FT + + A AL M + GC PNL TY +++G C
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 548 K-----------------------------ID------YIDLATQLFDEMKRKGIFPDVV 572
K ID ++D A LF EM+ KGI P+VV
Sbjct: 237 KRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVV 296
Query: 573 TYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKLQDPKLVQF 619
TY+ LI+ +GR + ++L +M I+K +P LV F
Sbjct: 297 TYSSLISCLCSYGRWSDASQLLSDM----------IEKKINPNLVTF 333
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 130/307 (42%), Gaps = 9/307 (2%)
Query: 145 ALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLV-FNVLIKVFASNSMLEHAHQVFVSAKNV 203
+L+ + Y + D+ + S +++ + LV FN LI F A +++
Sbjct: 300 SLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR 359
Query: 204 GLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--A 259
++ I + N L+ ++ P++ TY ++ C R+
Sbjct: 360 SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDG 419
Query: 260 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHG 319
E+ ++ G VTY T I+GL G D A K+ +++ P + ++ ++ G
Sbjct: 420 TELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDG 479
Query: 320 FCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPS 379
C G + +ALEV + M+ S D+Y Y ++ CK G V +KP+
Sbjct: 480 LCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPN 539
Query: 380 IVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREAL 439
+V Y ++I + L ++L ++ + M ++ PN+ N ++R H R+G +
Sbjct: 540 VVTYNTMI----SGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASA 595
Query: 440 TLLEDFH 446
L+ +
Sbjct: 596 ELIREMR 602
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 118/302 (39%), Gaps = 29/302 (9%)
Query: 127 FRIIIHTFAMAGMHLEVFALLRDIV----------------GYC---KCDDSFEQFSTLL 167
F +I F G +E L D++ G+C + D + + F ++
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 168 DLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXX 226
V+ +N LIK F + +E ++F + GL + L++ L
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 227 XXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYI 282
++ G P+I TY+I++ G + A E+ + +S + Y T I
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Query: 283 RGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF 342
G+C+ G VD L L K N +N +I G C + + EA +L++MK
Sbjct: 513 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 572
Query: 343 PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDK 402
P+ +YN L+ A + GD C+ V S I L N L +L DK
Sbjct: 573 PNSGTYNTLIRAHLRDGDKAASAELIREMRSCR----FVGDASTIGLVANMLHDGRL-DK 627
Query: 403 SL 404
S
Sbjct: 628 SF 629
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 163 bits (412), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 115/473 (24%), Positives = 221/473 (46%), Gaps = 27/473 (5%)
Query: 146 LLRDIVGYCKCDDSFEQFSTLL-DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVG 204
+LR+ + + +D+ + F+ ++ P S++ F L+ V A + + +F + +G
Sbjct: 54 ILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILG 113
Query: 205 LELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLAA 260
+ + +CN ++ C+ +M+ G P++ T+T +++ I A
Sbjct: 114 IPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAI 173
Query: 261 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 320
+ +I G P VVTY T IR LC+ +++ A +L ++ N +NA++ G
Sbjct: 174 ALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGL 233
Query: 321 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 380
C+ G +A +L +M R P+V ++ L++AF K G + + P +
Sbjct: 234 CEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV 293
Query: 381 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 440
Y SLI N L L D++ +++ M +N PN +I ++ C+ + + +
Sbjct: 294 FTYGSLI----NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMK 349
Query: 441 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF- 499
+ + ++G+ N +Y +I C P +A E+ +M R P + Y+ L+ G
Sbjct: 350 IFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLC 409
Query: 500 --AKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 557
K + + E + REM++ N+ TYT +I G CK+ ++ A
Sbjct: 410 CNGKVEKALMIFEYMRKREMDI---------------NIVTYTIIIQGMCKLGKVEDAFD 454
Query: 558 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKK 610
LF + KG+ P+V+TYT +I+ + + G I E + LF +MK + L ++ + K
Sbjct: 455 LFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 105/360 (29%), Positives = 175/360 (48%), Gaps = 22/360 (6%)
Query: 243 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 298
N++T +IM++C + LA +GKI + G P VT+ T I GLC G V A +LV
Sbjct: 106 NLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELV 165
Query: 299 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
++ H NA+++G C G V++A+ +++ M + P+ +Y +L CK
Sbjct: 166 DRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS 225
Query: 359 GDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 417
G +IK V Y+ +I LCK+ D + ++N M +
Sbjct: 226 GQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKD-----GSLDNAFNLFNEMEIKGFKA 280
Query: 418 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
+ II ++R C G++ + LL D ++ I + +++ +I KE + A EL
Sbjct: 281 DIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELH 340
Query: 478 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLY 537
M++R + P V Y++LI GF KE +++ A + M GC PN+
Sbjct: 341 KEMIQRGISPDTVTYTSLIDGFCKEN------------QLDKANHMLDLMVSKGCGPNIR 388
Query: 538 TYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
T+ LI+G+CK + ID +LF +M +G+ D VTY LI + + G++ +LF EM
Sbjct: 389 TFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 191/456 (41%), Gaps = 26/456 (5%)
Query: 154 CKCDD---SFEQFSTLLDLPHH-SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHI 209
C+C +F ++ L + + F+ LI + A ++ +G + +
Sbjct: 118 CRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTL 177
Query: 210 RSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTY----TIMMSCGDIRLAAEILGK 265
+ N L+ L ++ETG PN TY +M G LA E+L K
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 266 IYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGA 325
+ V Y I GLC+ G +D A L ++ K + + +I GFC G
Sbjct: 238 MEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGR 297
Query: 326 VNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTS 385
++ ++L +M + PDV +++ L++ F K+G + I P V YTS
Sbjct: 298 WDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTS 357
Query: 386 LI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 444
LI CK + DK+ + + M+ PN N ++ +C+ + L L
Sbjct: 358 LIDGFCK-----ENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRK 412
Query: 445 FHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS 504
+G+ + +YN +I C+ ++A EL M+ R V P +V+Y L+ G
Sbjct: 413 MSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG- 471
Query: 505 NFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 564
E A +F+++ + ++ Y +I G C +D A LF +
Sbjct: 472 -----------EPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPL 520
Query: 565 KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 600
KG+ PDV TY ++I K G + E + LF +M+ +
Sbjct: 521 KGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEED 556
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/387 (20%), Positives = 166/387 (42%), Gaps = 26/387 (6%)
Query: 177 FNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLM 236
++++I + L++A +F + G + I L++ ++
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMI 309
Query: 237 ETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 292
+ P++ ++ ++ C G +R A E+ ++ + G +P VTY + I G C+ +D
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 293 VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLL 352
A+ ++ + K N FN +I+G+C+ +++ LE+ +M D +YN L+
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 353 NAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSML 411
FC+ G + +++P IV+Y L+ LC N G+ +K+LE++ +
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN---GEP--EKALEIFEKIE 484
Query: 412 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 471
++ + + I N I+ C + +A L +G+ + +YN +I +CK+
Sbjct: 485 KSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLS 544
Query: 472 MALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIG 531
A L +M + P Y+ LI E + + L +E+ R G
Sbjct: 545 EADLLFRKMEEDGHSPNGCTYNILIRAHLGEG------------DATKSAKLIEEIKRCG 592
Query: 532 CLPNLYTYTCLI----DGFCKIDYIDL 554
+ T ++ DG K ++D+
Sbjct: 593 FSVDASTVKMVVDMLSDGRLKKSFLDM 619
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 150/368 (40%), Gaps = 25/368 (6%)
Query: 115 VETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSV 174
+E GF + + +I F AG + LLRD++ D V
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPD---------------V 317
Query: 175 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 234
+ F+ LI F L A ++ G+ + L+
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 235 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
++ G PNI T+ I+++ I E+ K+ G VTY T I+G CE G
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 437
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
++VA +L +++ + + + ++ G C G +ALE+ E+++ S+ D+ YN+
Sbjct: 438 LEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNI 497
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNS 409
+++ C V +KP + Y +I LCK KG L + L ++
Sbjct: 498 IIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK---KGS-LSEADL-LFRK 552
Query: 410 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 469
M ++ PN N ++R H EG ++ L+E+ G +++ + ++ M+
Sbjct: 553 MEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDMLSDGRL 612
Query: 470 PKMALELM 477
K L+++
Sbjct: 613 KKSFLDML 620
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 110/267 (41%), Gaps = 48/267 (17%)
Query: 401 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 460
D +++++ M ++ RP I + + V R Q+ L L + +GI N Y+ + +
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 461 IHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKE---QSNFEMVERL----- 512
I+ C+ +A M +++K P V +STLI+G E E+V+R+
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 513 ---------------FTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 557
+++ A L M G PN TY ++ CK LA +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 558 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM-----KANCIL--------- 603
L +M+ + I D V Y+++I K G + LF EM KA+ I+
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293
Query: 604 ----LDDGIKKLQD-------PKLVQF 619
DDG K L+D P +V F
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAF 320
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 170/360 (47%), Gaps = 22/360 (6%)
Query: 243 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 298
N++T +IM++C + LA +GKI + G P +T+ T I GLC G V A +LV
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181
Query: 299 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
++ H + N +++G C G EA+ ++++M P+ +Y +LN CK
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 241
Query: 359 GDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 417
G IK V Y+ +I LCK D + ++N M I
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCK-----HGSLDNAFNLFNEMEMKGITT 296
Query: 418 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
N I N ++ C G++ + LL D ++ IN N +++ +I KE + A EL
Sbjct: 297 NIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELH 356
Query: 478 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLY 537
M+ R + P + Y++LI GF KE ++ A + M GC PN+
Sbjct: 357 KEMIHRGIAPDTITYTSLIDGFCKEN------------HLDKANQMVDLMVSKGCDPNIR 404
Query: 538 TYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
T+ LI+G+CK + ID +LF +M +G+ D VTY LI + + G++ +LF EM
Sbjct: 405 TFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEM 464
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/457 (23%), Positives = 195/457 (42%), Gaps = 26/457 (5%)
Query: 153 YCKCDD---SFEQFSTLLDLPHH-SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELH 208
+C+C +F ++ L + + + F+ LI + A ++ +G +
Sbjct: 133 FCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPD 192
Query: 209 IRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTY----TIMMSCGDIRLAAEILG 264
+ + N L+ L ++E G PN TY +M G LA E+L
Sbjct: 193 LITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLR 252
Query: 265 KIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRG 324
K+ V Y I GLC+ G +D A L ++ K N +N +I GFC G
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAG 312
Query: 325 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYT 384
++ ++L +M + P+V ++++L+++F K+G + I P + YT
Sbjct: 313 RWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYT 372
Query: 385 SLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLE 443
SLI CK + DK+ ++ + M+ PN N ++ +C+ + + L L
Sbjct: 373 SLIDGFCK-----ENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 444 DFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ 503
+G+ + +YN +I C+ +A EL M+ R V P +V Y L+ G
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 504 SNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 563
+ + +E +F+++ + ++ Y +I G C +D A LF +
Sbjct: 488 ESEKALE------------IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLP 535
Query: 564 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 600
KG+ P V TY ++I K G + E LF +M+ +
Sbjct: 536 LKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEED 572
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 153/330 (46%), Gaps = 18/330 (5%)
Query: 277 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 336
T I C C + +A + K+ + N+ F+ +I+G C G V+EALE+++ M
Sbjct: 125 TLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRM 184
Query: 337 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLK 395
PD+ + N L+N C G +P+ V Y ++ ++CK+
Sbjct: 185 VEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS--- 241
Query: 396 GQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQY 455
GQ ++E+ M + I+ + + + I+ C+ G A L + +GI N
Sbjct: 242 GQTAL--AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
Query: 456 SYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTR 515
+YN +I C +L+ M+KR + P VV +S LI F KE E E
Sbjct: 300 TYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEE----- 354
Query: 516 EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYT 575
L +EM G P+ TYT LIDGFCK +++D A Q+ D M KG P++ T+
Sbjct: 355 -------LHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFN 407
Query: 576 VLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
+LI Y K RI + +LF +M ++ D
Sbjct: 408 ILINGYCKANRIDDGLELFRKMSLRGVVAD 437
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/406 (21%), Positives = 169/406 (41%), Gaps = 55/406 (13%)
Query: 177 FNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLM 236
++++I + L++A +F + G+ +I + N L+ ++
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMI 325
Query: 237 ETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 292
+ PN+ T+++++ G +R A E+ ++ G P +TY + I G C+ ++D
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 293 VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLL 352
A+++V + K N FN +I+G+C+ +++ LE+ +M D +YN L+
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 353 NAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQ 412
FC+ G + + + E++ M+
Sbjct: 446 QGFCELGKL---------------------------------------NVAKELFQEMVS 466
Query: 413 NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 472
+ PN + +L C G+ +AL + E + + L+ YN IIH +C S
Sbjct: 467 RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 526
Query: 473 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGC 532
A +L + + V PGV Y+ +I G K+ ++ A LF++M G
Sbjct: 527 AWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGP------------LSEAELLFRKMEEDGH 574
Query: 533 LPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 578
P+ +TY LI + +L +E+KR G D T ++I
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/368 (22%), Positives = 159/368 (43%), Gaps = 25/368 (6%)
Query: 115 VETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSV 174
+E G + ++ + I+I F AG + LLRD++ + +V
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKR---------------KINPNV 333
Query: 175 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 234
+ F+VLI F L A ++ + G+ + L+
Sbjct: 334 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDL 393
Query: 235 LMETGPLPNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
++ G PNI T+ I+++ C R+ E+ K+ G VTY T I+G CE G
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGK 453
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
++VA +L +++ + P N + ++ G C G +ALE+ E+++ S+ D+ YN+
Sbjct: 454 LNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNI 513
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNS 409
+++ C V +KP + Y +I LCK KG L + L ++
Sbjct: 514 IIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCK---KGP-LSEAEL-LFRK 568
Query: 410 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 469
M ++ P+ N ++R H +G +++ L+E+ G +++ + +I M+
Sbjct: 569 MEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDGRL 628
Query: 470 PKMALELM 477
K L+++
Sbjct: 629 KKSFLDML 636
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 97/225 (43%), Gaps = 23/225 (10%)
Query: 401 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 460
D +++++ M+ + P I + + + Q+ L L + +GI N Y+ + +
Sbjct: 70 DDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIM 129
Query: 461 IHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKE---QSNFEMVERL----- 512
I+ C+ +A M +++K P + +STLI+G E E+V+R+
Sbjct: 130 INCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH 189
Query: 513 ---------------FTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 557
+ + A L +M GC PN TY +++ CK LA +
Sbjct: 190 KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME 249
Query: 558 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
L +M+ + I D V Y+++I KHG + LF EM+ I
Sbjct: 250 LLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGI 294
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 114/456 (25%), Positives = 199/456 (43%), Gaps = 33/456 (7%)
Query: 146 LLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGL 205
+LR +VG D D+ H VF+ L+ +A M+ + VF ++ GL
Sbjct: 117 VLRSLVGGVSEDPE--------DVSH----VFSWLMIYYAKAGMINDSIVVFEQIRSCGL 164
Query: 206 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLAAE 261
+ H+++C LL L +++ G + NIH Y +++ GD A +
Sbjct: 165 KPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEK 224
Query: 262 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 321
+L ++ G P + TY T I C+ A + ++ N +N+ IHGF
Sbjct: 225 LLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFS 284
Query: 322 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 381
+ G + EA + E+K T V +Y L++ +C+ D+ P +V
Sbjct: 285 REGRMREATRLFREIKDDVTANHV-TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVV 343
Query: 382 NYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 441
Y S++ KL ++ + M I P+ I CN ++ +C+ A+ +
Sbjct: 344 TYNSIL----RKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKV 399
Query: 442 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 501
+ E G+ L+ YSY +IH CK + A E + M+++ PG YS L+ GF
Sbjct: 400 KKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYN 459
Query: 502 EQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE 561
+ E+ + L +E + G ++ Y LI CK++ +D A LF+
Sbjct: 460 QNKQDEITK------------LLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFES 507
Query: 562 MKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
M++KG+ D V +T + Y + G++ E + LF M
Sbjct: 508 MEKKGLVGDSVIFTTMAYAYWRTGKVTEASALFDVM 543
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 127/259 (49%), Gaps = 17/259 (6%)
Query: 348 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVY 407
++ L+ + K G + C +KP + T L+ N L Q+L D +++
Sbjct: 136 FSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLL----NSLVKQRLTDTVWKIF 191
Query: 408 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 467
M++ + N + N ++ + G +A LL + E+G+ + ++YN +I + CK+
Sbjct: 192 KKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKK 251
Query: 468 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEM 527
S AL + RM + V P +V Y++ I GF++E M A LF+E+
Sbjct: 252 SMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREG------------RMREATRLFREI 299
Query: 528 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 587
+ N TYT LIDG+C+++ ID A +L + M+ +G P VVTY ++ + GRI
Sbjct: 300 -KDDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRI 358
Query: 588 GEKNKLFGEMKANCILLDD 606
E N+L EM I D+
Sbjct: 359 REANRLLTEMSGKKIEPDN 377
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 158/366 (43%), Gaps = 23/366 (6%)
Query: 245 HTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRK 300
H ++ +M G I + + +I G P + + L + D K+ +K
Sbjct: 134 HVFSWLMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKK 193
Query: 301 LHCKLHPL-NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKG 359
+ KL + N H +N ++H + G +A ++L EM+ FPD+++YN L++ +CKK
Sbjct: 194 M-VKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKS 252
Query: 360 DVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNT 419
+ P+IV Y S I + + ++ E+ + + N + T
Sbjct: 253 MHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKDDVTANHVTYTT 312
Query: 420 IICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPR 479
+I + CR EAL L E +G + +YN I+ +C++ + A L+
Sbjct: 313 LIDGY-----CRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTE 367
Query: 480 MLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTY 539
M + + P + +TLI+ + K +M A + ++M G ++Y+Y
Sbjct: 368 MSGKKIEPDNITCNTLINAYCK------------IEDMVSAVKVKKKMIESGLKLDMYSY 415
Query: 540 TCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 599
LI GFCK+ ++ A + M KG P TY+ L+ ++ + E KL E +
Sbjct: 416 KALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEK 475
Query: 600 NCILLD 605
+ D
Sbjct: 476 RGLCAD 481
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/360 (28%), Positives = 181/360 (50%), Gaps = 22/360 (6%)
Query: 243 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 298
N++TY I+++C + LA +LGK+ + G P +VT + + G C + A LV
Sbjct: 112 NLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALV 171
Query: 299 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
++ + ++ F +IHG +EA+ +++ M PD+ +Y ++N CK+
Sbjct: 172 DQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKR 231
Query: 359 GDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 417
GD +I+ ++V Y+++I LCK + + D +L ++ M +RP
Sbjct: 232 GDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE-----DDALNLFTEMENKGVRP 286
Query: 418 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
N I + ++ C G++ +A LL D E+ IN N +++ +I K+ A +L
Sbjct: 287 NVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLY 346
Query: 478 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLY 537
M+KR++ P + YS+LI+GF M++RL A + + M R CLPN+
Sbjct: 347 EEMIKRSIDPNIFTYSSLINGFC-------MLDRL-----GEAKQMLELMIRKDCLPNVV 394
Query: 538 TYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
TY LI+GFCK +D +LF EM ++G+ + VTYT LI + + +F +M
Sbjct: 395 TYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 454
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 111/424 (26%), Positives = 194/424 (45%), Gaps = 30/424 (7%)
Query: 172 HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXX 231
H++ +N+LI F S L A + +G E I + N LL
Sbjct: 111 HNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVAL 170
Query: 232 XXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE 287
++E G P+ T+T ++ A ++ ++ + G P +VTYG + GLC+
Sbjct: 171 VDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCK 230
Query: 288 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 347
G D+A L+ K+ N ++ VI C+ ++AL + EM++ P+V +
Sbjct: 231 RGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 290
Query: 348 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKL-KGQQLYDKSL 404
Y+ L++ C G +I P++V +++LI + K KL K ++LY++
Sbjct: 291 YSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEE-- 348
Query: 405 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
M++ +I PN + ++ C + EA +LE + N +YN +I+
Sbjct: 349 -----MIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGF 403
Query: 465 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF--AKEQSNFEMVERLFTREMNVACA 522
CK +EL M +R ++ V Y+TLI GF A++ N +MV
Sbjct: 404 CKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMV------------- 450
Query: 523 LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYH 582
F++M +G PN+ TY L+DG CK + A +F+ ++R + PD+ TY ++I
Sbjct: 451 -FKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMC 509
Query: 583 KHGR 586
K G+
Sbjct: 510 KAGK 513
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 109/239 (45%), Gaps = 8/239 (3%)
Query: 239 GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
G PN+ TY+ ++SC G A+ +L + NP +VT+ I + G + A
Sbjct: 283 GVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKA 342
Query: 295 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 354
KL ++ + N ++++I+GFC + EA ++LE M P+V +YN L+N
Sbjct: 343 EKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLING 402
Query: 355 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 414
FCK V + + V YT+LI + + D + V+ M+
Sbjct: 403 FCKAKRVDKGMELFREMSQRGLVGNTVTYTTLI----HGFFQARDCDNAQMVFKQMVSVG 458
Query: 415 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMA 473
+ PN + N +L C+ G+ +A+ + E + + Y+YN +I +CK KM
Sbjct: 459 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 401 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 460
D ++ ++ M Q+ P+ I + +L + +F ++ E GI+ N Y+YN +
Sbjct: 60 DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119
Query: 461 IHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVA 520
I+ C+ S +AL L+ +M+K P +V ++L++GF ++ A
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGN------------RISDA 167
Query: 521 CALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAW 580
AL +M +G P+ T+T LI G + A L D M ++G PD+VTY ++
Sbjct: 168 VALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNG 227
Query: 581 YHKHGRIGEKNKLFGEMKA 599
K G L +M+A
Sbjct: 228 LCKRGDTDLALNLLNKMEA 246
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 159 bits (402), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 177/360 (49%), Gaps = 22/360 (6%)
Query: 243 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 298
+++TY+I ++C + LA +L K+ + G P +VT + + G C + A LV
Sbjct: 117 DLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 299 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
++ + ++ F +IHG +EA+ ++++M PD+ +Y ++N CK+
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 359 GDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 417
GD+ +I+ +V Y ++I LCK K D +L ++ M IRP
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK-----HMDDALNLFTEMDNKGIRP 291
Query: 418 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
+ + ++ C G++ +A LL D E+ IN N +++ +I KE A +L
Sbjct: 292 DVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 351
Query: 478 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLY 537
M+KR++ P + YS+LI+GF M +RL + A +F+ M C PN+
Sbjct: 352 DEMIKRSIDPDIFTYSSLINGFC-------MHDRL-----DEAKHMFELMISKDCFPNVV 399
Query: 538 TYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
TY+ LI GFCK ++ +LF EM ++G+ + VTYT LI + + +F +M
Sbjct: 400 TYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM 459
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 115/477 (24%), Positives = 214/477 (44%), Gaps = 39/477 (8%)
Query: 161 EQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLX 220
EQ TL H + +++ I F S L A V +G E I + + LL
Sbjct: 107 EQMQTLG--ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYC 164
Query: 221 XXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVV 276
++E G P+ T+T ++ A ++ ++ + G P +V
Sbjct: 165 HSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV 224
Query: 277 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 336
TYGT + GLC+ G +D+A L++K+ + +N +I G C+ +++AL + EM
Sbjct: 225 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEM 284
Query: 337 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKL 394
+ PDV++Y+ L++ C G +I P++V +++LI + + KL
Sbjct: 285 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 344
Query: 395 -KGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLN 453
+ ++LYD+ M++ +I P+ + ++ C + EA + E + N
Sbjct: 345 VEAEKLYDE-------MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 397
Query: 454 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF--AKEQSNFEMVER 511
+Y+ +I CK + +EL M +R ++ V Y+TLI GF A++ N +MV +
Sbjct: 398 VVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFK 457
Query: 512 LFTR---------------------EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 550
++ A +F+ + R P++YTY +I+G CK
Sbjct: 458 QMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 517
Query: 551 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDG 607
++ +LF + KG+ P+V+ Y +I+ + + G E + L +MK + L + G
Sbjct: 518 KVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSG 574
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/353 (26%), Positives = 159/353 (45%), Gaps = 21/353 (5%)
Query: 239 GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
G P++ TY+ ++SC G A+ +L + NP VVT+ I + G + A
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 295 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 354
KL ++ + + ++++I+GFC ++EA + E M S FP+V +Y+ L+
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 355 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 414
FCK V + + V YT+LI + + D + V+ M+
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI----HGFFQARDCDNAQMVFKQMVSVG 463
Query: 415 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 474
+ PN + N +L C+ G+ +A+ + E + + Y+YN +I +CK +
Sbjct: 464 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGW 523
Query: 475 ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLP 534
EL + + V P V+ Y+T+ISGF ++ S E A +L ++M G LP
Sbjct: 524 ELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEE------------ADSLLKKMKEDGPLP 571
Query: 535 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 587
N TY LI + + + +L EM+ G D T ++ H GR+
Sbjct: 572 NSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLH-DGRL 623
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 116/238 (48%), Gaps = 23/238 (9%)
Query: 391 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 450
+N+L D +++++ M+++ P+ + N +L + +F ++L E GI
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 451 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF--AKEQSNF-- 506
+ + Y+Y+ I+ C+ S +AL ++ +M+K P +V S+L++G+ +K S+
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 507 ---EMVE-----RLFT-----------REMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 547
+MVE FT + + A AL +M + GC P+L TY +++G C
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 548 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
K IDLA L +M++ I DVV Y +I K+ + + LF EM I D
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/350 (20%), Positives = 151/350 (43%), Gaps = 16/350 (4%)
Query: 138 GMHLEVF---ALLRDIVGYCKCDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHA 193
G+ +VF +L+ + Y + D+ S +++ + +V+ F+ LI F L A
Sbjct: 288 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEA 347
Query: 194 HQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS- 252
+++ ++ I + + L+ ++ PN+ TY+ ++
Sbjct: 348 EKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKG 407
Query: 253 -CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKL-HCKLHPL 308
C R+ E+ ++ + G VTY T I G + D A + +++ +HP
Sbjct: 408 FCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP- 466
Query: 309 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 368
N +N ++ G C+ G + +A+ V E ++ S PD+Y+YN+++ CK G V
Sbjct: 467 NILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELF 526
Query: 369 XXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 427
+ P+++ Y ++I C+ KG + SL M ++ PN+ N ++R
Sbjct: 527 CNLSLKGVSPNVIAYNTMISGFCR---KGSKEEADSL--LKKMKEDGPLPNSGTYNTLIR 581
Query: 428 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
R+G + L+++ G + + + +M+ K L+++
Sbjct: 582 ARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKSFLDML 631
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 193/415 (46%), Gaps = 20/415 (4%)
Query: 177 FNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLM 236
+++LI LE A + G + R+ L+K L ++
Sbjct: 269 YSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMI 328
Query: 237 ETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 292
G PN+HTYT+++ G I A + K+ + P+V+TY I G C+ G V
Sbjct: 329 PRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVV 388
Query: 293 VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLL 352
A +L+ + + N FN ++ G C+ G +A+ +L+ M + PD+ SYN+L+
Sbjct: 389 PAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLI 448
Query: 353 NAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQ 412
+ C++G + I+P + +T++I N Q D + ML+
Sbjct: 449 DGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAII----NAFCKQGKADVASAFLGLMLR 504
Query: 413 NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 472
I + + ++ C+ G+ R+AL +LE + I +S N I+ M+ K K
Sbjct: 505 KGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKE 564
Query: 473 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGC 532
L ++ ++ K ++P VV Y+TL+ G + + ++ + + + M GC
Sbjct: 565 ELAMLGKINKLGLVPSVVTYTTLVDGLIR------------SGDITGSFRILELMKLSGC 612
Query: 533 LPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 587
LPN+Y YT +I+G C+ ++ A +L M+ G+ P+ VTYTV++ Y +G++
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL 667
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 177/385 (45%), Gaps = 33/385 (8%)
Query: 242 PNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 297
PN +Y+I++ G + A + ++ G P+ TY I+ LC+ G +D A L
Sbjct: 264 PNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 298 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 357
++ + N H + +I G C+ G + EA V +M R FP V +YN L+N +CK
Sbjct: 324 FDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCK 383
Query: 358 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIR 416
G V KP++ + L+ LC+ G+ K++ + ML N +
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCR---VGKPY--KAVHLLKRMLDNGLS 438
Query: 417 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 476
P+ + N ++ CREG A LL + I + ++ II+ CK+ +A
Sbjct: 439 PDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAF 498
Query: 477 MPRMLKRNVLPGVVNYSTLISGF---AKEQSNFEMVE-----RLFTR--EMNV------- 519
+ ML++ + V +TLI G K + ++E R+ T +NV
Sbjct: 499 LGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSK 558
Query: 520 AC------ALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVT 573
C A+ +++++G +P++ TYT L+DG + I + ++ + MK G P+V
Sbjct: 559 GCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYP 618
Query: 574 YTVLIAWYHKHGRIGEKNKLFGEMK 598
YT++I + GR+ E KL M+
Sbjct: 619 YTIIINGLCQFGRVEEAEKLLSAMQ 643
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 151/333 (45%), Gaps = 17/333 (5%)
Query: 275 VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 334
++ Y T + LC+ GY + A + K+ L+SH +++ GFC+ + +AL+V +
Sbjct: 195 MIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFD 254
Query: 335 EMKSSRT-FPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNK 393
M T P+ SY++L++ C+ G + +PS YT LI
Sbjct: 255 VMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI----KA 310
Query: 394 LKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLN 453
L + L DK+ +++ M+ +PN ++ CR+G+ EA + + I +
Sbjct: 311 LCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPS 370
Query: 454 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLF 513
+YN +I+ CK+ A EL+ M KR P V ++ L+ G + ++ V
Sbjct: 371 VITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVH--- 427
Query: 514 TREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVT 573
L + M G P++ +Y LIDG C+ +++ A +L M I PD +T
Sbjct: 428 ---------LLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLT 478
Query: 574 YTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 606
+T +I + K G+ + G M I LD+
Sbjct: 479 FTAIINAFCKQGKADVASAFLGLMLRKGISLDE 511
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 118/285 (41%), Gaps = 33/285 (11%)
Query: 239 GPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
G +P++ TYT ++ GDI + IL + SG P V Y I GLC+ G V+ A
Sbjct: 576 GLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEA 635
Query: 295 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 354
KL+ + N + ++ G+ G ++ ALE + M + Y+ LL
Sbjct: 636 EKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQG 695
Query: 355 F--CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQ 412
F +KG + P +N LI S+++
Sbjct: 696 FVLSQKGIDNSEESTVSDIALRETDPECIN--ELI---------------------SVVE 732
Query: 413 NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 472
+ +C ++ C+EG+ E+ L+++ E+G+ L + + + I+ C +
Sbjct: 733 QLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKKKHTK 791
Query: 473 ALELMPRMLKRNVLPGVVNYSTLISGFAKE---QSNFEMVERLFT 514
+EL+ +LK +P ++ +I G KE + E+V L T
Sbjct: 792 CMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLT 836
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 206/458 (44%), Gaps = 40/458 (8%)
Query: 161 EQFSTLLDLPH--------HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSC 212
+QF+ +LD H++ N++I F A+ V +G E +
Sbjct: 102 KQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTF 161
Query: 213 NFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYR 268
N L+K L ++E G P++ TY +++ GD LA ++L K+
Sbjct: 162 NTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEE 221
Query: 269 SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 328
V TY T I LC G +D A L +++ K + +N+++ G C+ G N+
Sbjct: 222 RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWND 281
Query: 329 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL 388
+L++M S P+V ++N+LL+ F K+G + I P+I+ Y +L
Sbjct: 282 GALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL-- 339
Query: 389 LCKNKLKGQQLYDKSLEVYNS---MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 445
+ G + ++ E N M++N P+ + +++ +C + + + + +
Sbjct: 340 -----MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 446 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF---AKE 502
++G+ N +Y+ ++ C+ K+A EL M+ VLP V+ Y L+ G K
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 503 QSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM 562
+ E+ E L +M++ + YT +I+G CK ++ A LF +
Sbjct: 455 EKALEIFEDLQKSKMDLGIVM---------------YTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 563 KRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 600
KG+ P+V+TYTV+I+ K G + E N L +M+ +
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEED 537
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 207/461 (44%), Gaps = 64/461 (13%)
Query: 147 LRDIVGYCKCDDSFEQFSTLL-DLPHHSVLVFNVLIKVFAS----NSMLEHAHQVFVSAK 201
LR + K DD+ F ++ P S++ F+ A N +L+ Q+ ++
Sbjct: 60 LRSGIVDIKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN-- 117
Query: 202 NVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIR 257
G+ +I + N ++ C +M+ G P+ T+ ++ G +
Sbjct: 118 --GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVS 175
Query: 258 LAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVI 317
A ++ ++ +G P VVTY + + G+C G +A L+RK+ + + ++ +I
Sbjct: 176 EAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTII 235
Query: 318 HGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIK 377
C+ G ++ A+ + +EM++ V +YN L+ CK G
Sbjct: 236 DSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAG------------------ 277
Query: 378 PSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFRE 437
+ LL K+ M+ I PN I N +L V +EG+ +E
Sbjct: 278 ----KWNDGALLLKD-----------------MVSREIVPNVITFNVLLDVFVKEGKLQE 316
Query: 438 ALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 497
A L ++ +GI+ N +YN ++ C ++ A ++ M++ P +V +++LI
Sbjct: 317 ANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIK 376
Query: 498 GFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 557
G+ MV+R+ + +F+ +S+ G + N TY+ L+ GFC+ I LA +
Sbjct: 377 GYC-------MVKRV-----DDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424
Query: 558 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
LF EM G+ PDV+TY +L+ +G++ + ++F +++
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ 465
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 166/399 (41%), Gaps = 72/399 (18%)
Query: 115 VETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSV 174
+ET G SV + ++ AG + LL+D+V S E +P+ V
Sbjct: 254 METKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMV-------SREI------VPN--V 298
Query: 175 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 234
+ FNVL+ VF L+ A++++
Sbjct: 299 ITFNVLLDVFVKEGKLQEANELY-----------------------------------KE 323
Query: 235 LMETGPLPNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
++ G PNI TY +M C RL A +L + R+ +P +VT+ + I+G C
Sbjct: 324 MITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKR 383
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
VD K+ R + + N+ ++ ++ GFCQ G + A E+ +EM S PDV +Y +
Sbjct: 384 VDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGI 443
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
LL+ C G + ++ IV YT++I + KG ++ D + ++ S+
Sbjct: 444 LLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTII---EGMCKGGKVED-AWNLFCSL 499
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
++PN + ++ C++G EA LL E G N +YN +I ++
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV 509
+ +L+ M GF+ + S+ +MV
Sbjct: 560 TASAKLIEEMKS--------------CGFSADASSIKMV 584
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 96/246 (39%), Gaps = 45/246 (18%)
Query: 152 GYCKCDDSFEQFSTLLDLPHHS-----VLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLE 206
GYC + + + +LDL + ++ F LIK + ++ +VF + GL
Sbjct: 342 GYCM-QNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 400
Query: 207 LHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEI 262
+ + + L++ ++ G LP++ TY I++ G + A EI
Sbjct: 401 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEI 460
Query: 263 LGKIYRS-----------------------------------GGNPTVVTYGTYIRGLCE 287
+ +S G P V+TY I GLC+
Sbjct: 461 FEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCK 520
Query: 288 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 347
G + A+ L+RK+ + N +N +I + G + + +++EEMKS D S
Sbjct: 521 KGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASS 580
Query: 348 YNMLLN 353
M+++
Sbjct: 581 IKMVID 586
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 155 bits (392), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 193/423 (45%), Gaps = 27/423 (6%)
Query: 169 LPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXX 228
L S ++F++L++ M++ A + F K G +CN +L L
Sbjct: 150 LETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENA 209
Query: 229 XXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRG 284
+ N++T+ IM++ G ++ A LG + G PT+VTY T ++G
Sbjct: 210 WVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQG 269
Query: 285 LCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 344
G ++ A ++ ++ K + +N ++ C G A EVL EMK PD
Sbjct: 270 FSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPD 326
Query: 345 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDK 402
SYN+L+ GD+ + P+ Y +LI L +NK++ ++ +
Sbjct: 327 SVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIR 386
Query: 403 SLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIH 462
+ + I +++ N ++ +C+ G ++A L ++ GI Q++Y +I+
Sbjct: 387 EIR------EKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIY 440
Query: 463 MICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACA 522
++C+++ + A EL +++ + + P +V +TL+ G M+ A +
Sbjct: 441 VLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCA------------IGNMDRAFS 488
Query: 523 LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYH 582
L +EM + P+ TY CL+ G C + A +L EMKR+GI PD ++Y LI+ Y
Sbjct: 489 LLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYS 548
Query: 583 KHG 585
K G
Sbjct: 549 KKG 551
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/410 (25%), Positives = 191/410 (46%), Gaps = 23/410 (5%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
+V FN++I V L+ A + G++ I + N L++
Sbjct: 224 NVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLII 283
Query: 233 XXLMETGPLPNIHTYTIMMS--CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
+ G P++ TY ++S C + R A+E+L ++ G P V+Y IRG G
Sbjct: 284 SEMKSKGFQPDMQTYNPILSWMCNEGR-ASEVLREMKEIGLVPDSVSYNILIRGCSNNGD 342
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
+++A ++ + + +N +IHG + A ++ E++ D +YN+
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLC-KNKLKGQQLYDKSLEVYN 408
L+N +C+ GD I+P+ YTSLI +LC KNK + ++ E++
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTR------EADELFE 456
Query: 409 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 468
++ ++P+ ++ N ++ HC G A +LL++ IN + +YN ++ +C E
Sbjct: 457 KVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEG 516
Query: 469 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMS 528
+ A ELM M +R + P ++Y+TLISG++K+ + A + EM
Sbjct: 517 KFEEARELMGEMKRRGIKPDHISYNTLISGYSKKG------------DTKHAFMVRDEML 564
Query: 529 RIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 578
+G P L TY L+ G K +LA +L EMK +GI P+ ++ +I
Sbjct: 565 SLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVI 614
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 139/313 (44%), Gaps = 29/313 (9%)
Query: 302 HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDV 361
H +L ++ F+ ++ CQ V+EA+E MK +P + N +L + +
Sbjct: 147 HDRLETKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRI 206
Query: 362 XXXXXXXXXXXXCQIKPSIVNYTSLI-LLCK-NKLKGQQLYDKSLEVYNSMLQNAIRPNT 419
+IK ++ + +I +LCK KLK + + +EV+ I+P
Sbjct: 207 ENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVF------GIKPTI 260
Query: 420 IICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPR 479
+ N +++ G+ A ++ + +G + +YN I+ +C E A E++
Sbjct: 261 VTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLRE 317
Query: 480 MLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTY 539
M + ++P V+Y+ LI G + ++ +A A EM + G +P YTY
Sbjct: 318 MKEIGLVPDSVSYNILIRGCSNNG------------DLEMAFAYRDEMVKQGMVPTFYTY 365
Query: 540 TCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 599
LI G + I+ A L E++ KGI D VTY +LI Y +HG + L EM
Sbjct: 366 NTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEM-- 423
Query: 600 NCILLDDGIKKLQ 612
+ DGI+ Q
Sbjct: 424 ----MTDGIQPTQ 432
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/363 (19%), Positives = 156/363 (42%), Gaps = 38/363 (10%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
+++ +N L++ F+ +E A + K+ G + +++ N +L +
Sbjct: 259 TIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLRE- 317
Query: 233 XXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
+ E G +P+ +Y I++ + GD+ +A ++ + G PT TY T I GL
Sbjct: 318 --MKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFME 375
Query: 289 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 348
++ A L+R++ K L+S +N +I+G+CQ G +A + +EM + P ++Y
Sbjct: 376 NKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTY 435
Query: 349 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--------------------L 388
L+ C+K +KP +V +L+ +
Sbjct: 436 TSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDM 495
Query: 389 LCKNK-----------LKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFRE 437
+ N L G+ ++++ E+ M + I+P+ I N ++ + ++G +
Sbjct: 496 MSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKH 555
Query: 438 ALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 497
A + ++ G N +YN ++ + K ++A EL+ M ++P ++ ++I
Sbjct: 556 AFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIE 615
Query: 498 GFA 500
+
Sbjct: 616 AMS 618
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/472 (26%), Positives = 208/472 (44%), Gaps = 38/472 (8%)
Query: 142 EVFALLRDIVGYCKCDDSFEQFSTLLDLPHH--------SVLVFNVLIKVFASNSMLEHA 193
+VF+ I G+C+ ++ L+L + S++ + +LI F ++ A
Sbjct: 176 DVFSYNTVIRGFCEG----KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 194 HQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM-- 251
K +GLE + L++ ++E G P TY ++
Sbjct: 232 MGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRG 291
Query: 252 --SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLN 309
G ++ A+EI + G P V TY I GLC G A +L+ + K N
Sbjct: 292 FCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPN 351
Query: 310 SHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX-- 367
+ +N +I+ C+ G V +A+E++E MK RT PD +YN+LL C KGD+
Sbjct: 352 AVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLY 411
Query: 368 XXXXXXCQIKPSIVNYTSLI-LLCK-NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHI 425
P +++Y +LI LCK N+L ++L++Y+ +++ + + N +
Sbjct: 412 LMLKDSSYTDPDVISYNALIHGLCKENRLH------QALDIYDLLVEKLGAGDRVTTNIL 465
Query: 426 LRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV 485
L + G +A+ L + + I N +Y +I CK +A L+ +M +
Sbjct: 466 LNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSEL 525
Query: 486 LPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDG 545
P V +Y+ L+S KE S ++ A LF+EM R P++ ++ +IDG
Sbjct: 526 QPSVFDYNCLLSSLCKEGS------------LDQAWRLFEEMQRDNNFPDVVSFNIMIDG 573
Query: 546 FCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
K I A L M R G+ PD+ TY+ LI + K G + E F +M
Sbjct: 574 SLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKM 625
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 190/426 (44%), Gaps = 33/426 (7%)
Query: 204 GLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLA 259
G ++ + N LLK L + +P++ +Y ++ ++ A
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196
Query: 260 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHG 319
E+ ++ SG + ++VT+G I C+ G +D A ++++ + + ++I G
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256
Query: 320 FCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPS 379
FC G ++ + +E+ P +YN L+ FCK G + ++P+
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPN 316
Query: 380 IVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREAL 439
+ YT LI + L G ++L++ N M++ PN + N I+ C++G +A+
Sbjct: 317 VYTYTGLI----DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAV 372
Query: 440 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN--VLPGVVNYSTLIS 497
++E ++ + +YN ++ +C + A +L+ MLK + P V++Y+ LI
Sbjct: 373 EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH 432
Query: 498 GFAKEQ-----------------------SNFEMVERLFTREMNVACALFQEMSRIGCLP 534
G KE +N + L ++N A L++++S +
Sbjct: 433 GLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVR 492
Query: 535 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
N TYT +IDGFCK +++A L +M+ + P V Y L++ K G + + +LF
Sbjct: 493 NSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLF 552
Query: 595 GEMKAN 600
EM+ +
Sbjct: 553 EEMQRD 558
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 115/453 (25%), Positives = 200/453 (44%), Gaps = 46/453 (10%)
Query: 186 SNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIH 245
SN L++A VF A + G L N + K L ++ET N
Sbjct: 50 SNPQLKNAVSVFQQAVDSGSSLAFAGNNLMAK-LVRSRNHELAFSFYRKMLETDTFINFV 108
Query: 246 TYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLC---ECGYVDVAHKLV 298
+ + ++ C A +L + + G V + ++GLC ECG A L+
Sbjct: 109 SLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGK---AVSLL 165
Query: 299 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
R++ + +N VI GFC+ + +ALE+ EMK S + ++ +L++AFCK
Sbjct: 166 REMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA 225
Query: 359 GDVXXXXXXXXXXXXCQIKPSIVNYTSLI---LLCKNKLKGQQLYDKSLEVYNSMLQNAI 415
G + ++ +V YTSLI C +G+ L+D+ LE +S
Sbjct: 226 GKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDS------ 279
Query: 416 RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 475
P I N ++R C+ GQ +EA + E E+G+ N Y+Y +I +C K AL+
Sbjct: 280 -PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQ 338
Query: 476 LMPRMLKRNVLPGVVNYSTLISGFAKEQ------SNFEMVERLFTREMNVA--------C 521
L+ M++++ P V Y+ +I+ K+ E++++ TR N+ C
Sbjct: 339 LLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLC 398
Query: 522 AL--FQEMSRIGCL---------PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPD 570
A E S++ L P++ +Y LI G CK + + A ++D + K D
Sbjct: 399 AKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGD 458
Query: 571 VVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 603
VT +L+ K G + + +L+ ++ + I+
Sbjct: 459 RVTTNILLNSTLKAGDVNKAMELWKQISDSKIV 491
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 210/447 (46%), Gaps = 21/447 (4%)
Query: 146 LLRDIVGYCKCDDSFEQFSTLL-DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVG 204
L R+ + + K D++ + F ++ P S++ F+ L+ A + + +G
Sbjct: 36 LSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILG 95
Query: 205 LELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--AA 260
+ ++ + N ++ CL +M+ G P+I T +++ C R+ A
Sbjct: 96 VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155
Query: 261 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 320
++ ++ G P VT+ T + GL + A LV ++ K + + AVI+G
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215
Query: 321 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 380
C+RG + AL +L +M+ + DV Y+ ++++ CK V I+P +
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275
Query: 381 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 440
Y+SLI N + + + + + ML+ I PN + N ++ +EG+ EA
Sbjct: 276 FTYSSLISCLCNYGR----WSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 441 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 500
L ++ ++ I+ N +YN +I+ C A ++ M+ ++ LP VV Y+TLI+GF
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 501 KEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 560
K + + +E LF++MSR G + N TYT LI GF + D A +F
Sbjct: 392 KAKKVVDGME------------LFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFK 439
Query: 561 EMKRKGIFPDVVTYTVLIAWYHKHGRI 587
+M G+ P+++TY L+ K+G++
Sbjct: 440 QMVSDGVHPNIMTYNTLLDGLCKNGKL 466
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/359 (27%), Positives = 162/359 (45%), Gaps = 55/359 (15%)
Query: 243 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 298
N++TY IM++C + A ILGK+ + G P++VT + + G C + A LV
Sbjct: 99 NLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 158
Query: 299 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
++ + ++ F ++HG Q +EA+ ++E M PD+ +Y ++N CK+
Sbjct: 159 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 218
Query: 359 GDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 418
G+ D +L + N M + I +
Sbjct: 219 GEP---------------------------------------DLALNLLNKMEKGKIEAD 239
Query: 419 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMP 478
+I + ++ C+ +AL L + +GI + ++Y+ +I +C A L+
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 479 RMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYT 538
ML+R + P VV +++LI FAKE E A LF EM + PN+ T
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIE------------AEKLFDEMIQRSIDPNIVT 347
Query: 539 YTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
Y LI+GFC D +D A Q+F M K PDVVTY LI + K ++ + +LF +M
Sbjct: 348 YNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDM 406
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 110/463 (23%), Positives = 198/463 (42%), Gaps = 31/463 (6%)
Query: 172 HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXX 231
H++ +N++I S L A + +G I + N LL
Sbjct: 98 HNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 157
Query: 232 XXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE 287
++E G P+ T+T ++ A ++ ++ G P +VTYG I GLC+
Sbjct: 158 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 217
Query: 288 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 347
G D+A L+ K+ + ++ VI C+ V++AL + EM + PDV++
Sbjct: 218 RGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFT 277
Query: 348 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVY 407
Y+ L++ C G +I P++V + SLI + + ++ +++
Sbjct: 278 YSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLI----DAFAKEGKLIEAEKLF 333
Query: 408 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 467
+ M+Q +I PN + N ++ C + EA + + + +YN +I+ CK
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 468 SYPKMALELMPRMLKRNVLPGVVNYSTLISGF--AKEQSNFEMVERLFTRE--------- 516
+EL M +R ++ V Y+TLI GF A + N +MV + +
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 517 ------------MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 564
+ A +F+ + + P++YTY + +G CK ++ LF +
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 565 KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDG 607
KG+ PDV+ Y +I+ + K G E LF +MK + L D G
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 157/353 (44%), Gaps = 21/353 (5%)
Query: 239 GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
G P++ TY+ ++SC G A+ +L + NP VVT+ + I + G + A
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 295 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 354
KL ++ + N +N++I+GFC ++EA ++ M S PDV +YN L+N
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 355 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 414
FCK V + + V YT+LI + D + V+ M+ +
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI----HGFFQASDCDNAQMVFKQMVSDG 445
Query: 415 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 474
+ PN + N +L C+ G+ +A+ + E + + + Y+YN + +CK +
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGW 505
Query: 475 ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLP 534
+L + + V P V+ Y+T+ISGF K+ E A LF +M G LP
Sbjct: 506 DLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEE------------AYTLFIKMKEDGPLP 553
Query: 535 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 587
+ TY LI + + +L EM+ D TY ++ H GR+
Sbjct: 554 DSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLH-DGRL 605
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 155/350 (44%), Gaps = 16/350 (4%)
Query: 138 GMHLEVF---ALLRDIVGYCKCDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHA 193
G+ +VF +L+ + Y + D+ S +L+ + +V+ FN LI FA L A
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 194 HQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS- 252
++F ++ +I + N L+ ++ LP++ TY +++
Sbjct: 330 EKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLING 389
Query: 253 -CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCK-LHPL 308
C ++ E+ + R G VTY T I G + D A + +++ +HP
Sbjct: 390 FCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHP- 448
Query: 309 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 368
N +N ++ G C+ G + +A+ V E ++ S+ PD+Y+YN++ CK G V
Sbjct: 449 NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLF 508
Query: 369 XXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 427
+KP ++ Y ++I CK LK +++ ++ M ++ P++ N ++R
Sbjct: 509 CSLSLKGVKPDVIAYNTMISGFCKKGLK-----EEAYTLFIKMKEDGPLPDSGTYNTLIR 563
Query: 428 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
H R+G + L+++ + +Y + M+ K LE++
Sbjct: 564 AHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFLEVL 613
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 190/396 (47%), Gaps = 37/396 (9%)
Query: 243 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 298
+++T TIM++C + A +LG+ ++ G P +T+ T + G C G V A LV
Sbjct: 104 DMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALV 163
Query: 299 -RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 357
R + K P + + +I+G C +G V+EAL +++ M PD +Y +LN CK
Sbjct: 164 DRMVEMKQRP-DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCK 222
Query: 358 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIR 416
G+ IK S+V Y+ +I LCK+ +D +L ++N M I+
Sbjct: 223 SGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKD-----GSFDDALSLFNEMEMKGIK 277
Query: 417 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 476
+ + + ++ C +G++ + +L + + I + +++ +I + KE A EL
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
Query: 477 MPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACA-------------- 522
M+ R + P + Y++LI GF KE E ++F ++ C
Sbjct: 338 YNEMITRGIAPDTITYNSLIDGFCKENCLHE-ANQMFDLMVSKGCEPDIVTYSILINSYC 396
Query: 523 ----------LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
LF+E+S G +PN TY L+ GFC+ ++ A +LF EM +G+ P VV
Sbjct: 397 KAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVV 456
Query: 573 TYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 608
TY +L+ +G + + ++F +M+ + + L GI
Sbjct: 457 TYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 115/496 (23%), Positives = 207/496 (41%), Gaps = 63/496 (12%)
Query: 150 IVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHI 209
++G+CK L+ H + ++I + L A V A +G E
Sbjct: 89 VLGFCK--------GMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDT 140
Query: 210 RSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGK 265
+ + L+ ++E P++ T + +++ G + A ++ +
Sbjct: 141 ITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDR 200
Query: 266 IYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGA 325
+ G P VTYG + LC+ G +A L RK+ + + ++ VI C+ G+
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 326 VNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTS 385
++AL + EM+ DV +Y+ L+ C G I P +V +++
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 386 LILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 445
LI + + G+ L K E+YN M+ I P+TI N ++ C+E EA + +
Sbjct: 321 LIDVFVKE--GKLLEAK--ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376
Query: 446 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN 505
+G + +Y+ +I+ CK + L + + ++P + Y+TL+ GF +
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQ---- 432
Query: 506 FEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR- 564
+ ++N A LFQEM G P++ TY L+DG C ++ A ++F++M++
Sbjct: 433 --------SGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Query: 565 ----------------------------------KGIFPDVVTYTVLIAWYHKHGRIGEK 590
KG+ PDVVTY V+I K G + E
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Query: 591 NKLFGEMKANCILLDD 606
+ LF +MK + DD
Sbjct: 545 DMLFRKMKEDGCTPDD 560
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 168/392 (42%), Gaps = 33/392 (8%)
Query: 235 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
++E G P+ TY +++ G+ LA ++ K+ +VV Y I LC+ G
Sbjct: 201 MVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGS 260
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
D A L ++ K + ++++I G C G ++ ++L EM PDV +++
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSA 320
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNS 409
L++ F K+G + I P + Y SLI CK + ++ ++++
Sbjct: 321 LIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCK-----ENCLHEANQMFDL 375
Query: 410 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 469
M+ P+ + + ++ +C+ + + + L + +G+ N +YN ++ C+
Sbjct: 376 MVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGK 435
Query: 470 PKMALELMPRMLKRNVLPGVVNYSTLISGF---AKEQSNFEMVERLFTREMNV------- 519
A EL M+ R V P VV Y L+ G + E+ E++ M +
Sbjct: 436 LNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNI 495
Query: 520 -------------ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKG 566
A +LF +S G P++ TY +I G CK + A LF +MK G
Sbjct: 496 IIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDG 555
Query: 567 IFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
PD TY +LI + + +L EMK
Sbjct: 556 CTPDDFTYNILIRAHLGGSGLISSVELIEEMK 587
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 81/376 (21%), Positives = 158/376 (42%), Gaps = 22/376 (5%)
Query: 113 SWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYC---KCDDSFEQFSTLLD- 168
S + F +++ F + M G+ +V I G C K DD + ++
Sbjct: 254 SLCKDGSFDDALSLF----NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR 309
Query: 169 --LPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXX 226
+P V+ F+ LI VF L A +++ G+ + N L+
Sbjct: 310 NIIPD--VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLH 367
Query: 227 XXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYI 282
++ G P+I TY+I+++ C R+ + +I G P +TY T +
Sbjct: 368 EANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLV 427
Query: 283 RGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF 342
G C+ G ++ A +L +++ + P + + ++ G C G +N+ALE+ E+M+ SR
Sbjct: 428 LGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMT 487
Query: 343 PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYD 401
+ YN++++ C V +KP +V Y +I LCK KG
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCK---KGS--LS 542
Query: 402 KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEII 461
++ ++ M ++ P+ N ++R H ++ L+E+ G + + + +I
Sbjct: 543 EADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
Query: 462 HMICKESYPKMALELM 477
M+ K L+++
Sbjct: 603 DMLSDRRLDKSFLDML 618
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 83/198 (41%), Gaps = 12/198 (6%)
Query: 401 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 460
+ +++++ SM+Q+ P I N + R Q+ L + GI + Y+ +
Sbjct: 52 NDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIM 111
Query: 461 IHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVA 520
I+ C++ A ++ R K P + +STL++GF E E A
Sbjct: 112 INCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSE------------A 159
Query: 521 CALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAW 580
AL M + P+L T + LI+G C + A L D M G PD VTY ++
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 581 YHKHGRIGEKNKLFGEMK 598
K G LF +M+
Sbjct: 220 LCKSGNSALALDLFRKME 237
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 174/375 (46%), Gaps = 20/375 (5%)
Query: 235 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
++ +G +P Y ++ ++R E+L ++ + + TYGT ++G+C G
Sbjct: 373 MIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGD 432
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
+D A+ +V+++ N + +I F Q +A+ VL+EMK PD++ YN
Sbjct: 433 LDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNS 492
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
L+ K + +KP+ Y + I ++ + + + + M
Sbjct: 493 LIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFI---SGYIEASE-FASADKYVKEM 548
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
+ + PN ++C ++ +C++G+ EA + +QGI + +Y +++ + K
Sbjct: 549 RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKV 608
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI 530
A E+ M + + P V +Y LI+GF+K M A ++F EM
Sbjct: 609 DDAEEIFREMRGKGIAPDVFSYGVLINGFSK------------LGNMQKASSIFDEMVEE 656
Query: 531 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 590
G PN+ Y L+ GFC+ I+ A +L DEM KG+ P+ VTY +I Y K G + E
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 591 NKLFGEMKANCILLD 605
+LF EMK ++ D
Sbjct: 717 FRLFDEMKLKGLVPD 731
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 116/502 (23%), Positives = 195/502 (38%), Gaps = 62/502 (12%)
Query: 150 IVGYCKCDDSFEQFSTLLDLPHHSVLV----FNVLIKVFASNSMLEHAHQVFVSAKNVGL 205
I GYC+ + + + L+++ ++++ + ++K S+ L+ A+ + G
Sbjct: 389 IEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGC 448
Query: 206 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLAAE 261
++ L+K + E G P+I Y ++ + A
Sbjct: 449 RPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARS 508
Query: 262 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKL-HCKLHPLNSHCFNAVIHGF 320
L ++ +G P TYG +I G E A K V+++ C + P C +I+ +
Sbjct: 509 FLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLC-TGLINEY 567
Query: 321 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 380
C++G V EA M D +Y +L+N K V I P +
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDV 627
Query: 381 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 440
+Y LI N K+ +++ M++ + PN II N +L CR G+ +A
Sbjct: 628 FSYGVLI----NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKE 683
Query: 441 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISG-- 498
LL++ +G++ N +Y II CK A L M + ++P Y+TL+ G
Sbjct: 684 LLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Query: 499 -----------------------------------FAKEQSNFEMVERLFTREMNVACAL 523
F K + E++ RL +
Sbjct: 744 RLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFD----- 798
Query: 524 FQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHK 583
R G PN TY +ID CK ++ A +LF +M+ + P V+TYT L+ Y K
Sbjct: 799 -----RFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDK 852
Query: 584 HGRIGEKNKLFGEMKANCILLD 605
GR E +F E A I D
Sbjct: 853 MGRRAEMFPVFDEAIAAGIEPD 874
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 99/438 (22%), Positives = 182/438 (41%), Gaps = 44/438 (10%)
Query: 175 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLEL--HIRSCNFLLKCLXXXXXXXXXXXXX 232
++F +L + + +E A VFV + ++GLEL + C LL L
Sbjct: 152 VLFGILFDGYIAKGYIEEA--VFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVY 209
Query: 233 XXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
++E + ++ TY +++ G+++L ++L K + T+
Sbjct: 210 KGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATL------------- 256
Query: 289 GYVDVAHKLVRKLHCK-LHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 347
VD A KL + CK L PL + ++ +I G C+ + +A +L EM S D ++
Sbjct: 257 -NVDGALKLKESMICKGLVPLK-YTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHT 314
Query: 348 YNMLLNAFCK--KGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLE 405
Y++L++ K D IKP + + C + + + +K+
Sbjct: 315 YSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYD------CCICVMSKEGVMEKAKA 368
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
+++ M+ + + P ++ +CRE R+ LL + ++ I ++ Y+Y ++ +C
Sbjct: 369 LFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMC 428
Query: 466 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQ 525
A ++ M+ P VV Y+TLI F + F M V +
Sbjct: 429 SSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSR--------FGDAMRV----LK 476
Query: 526 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
EM G P+++ Y LI G K +D A EM G+ P+ TY I+ Y +
Sbjct: 477 EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEAS 536
Query: 586 RIGEKNKLFGEMKANCIL 603
+K EM+ +L
Sbjct: 537 EFASADKYVKEMRECGVL 554
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 167/381 (43%), Gaps = 43/381 (11%)
Query: 235 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
+++ G L + TYT++M+ + A EI ++ G P V +YG I G + G
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
+ A + ++ + N +N ++ GFC+ G + +A E+L+EM P+ +Y
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCT 702
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYD--KSLEVYN 408
+++ +CK GD+ + P YT+L+ C +L D +++ ++
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGC------CRLNDVERAITIFG 756
Query: 409 SMLQ---NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
+ + ++ P + N + + E + L++ ++ N +YN +I +C
Sbjct: 757 TNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLC 816
Query: 466 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV---------------- 509
KE + A EL +M N++P V+ Y++L++G+ K EM
Sbjct: 817 KEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHI 876
Query: 510 -----------ERLFTREMNVACALFQEMS-RIGCLPNLYTYTCLIDGFCKIDYIDLATQ 557
E + T+ + + +F + + GC ++ T L+ GF K+ +++A +
Sbjct: 877 MYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEK 936
Query: 558 LFDEMKRKGIFPDVVTYTVLI 578
+ + M R PD T LI
Sbjct: 937 VMENMVRLQYIPDSATVIELI 957
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 127/342 (37%), Gaps = 64/342 (18%)
Query: 306 HPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFP--DVYS---------------- 347
L+S F A+ C G+ +AL V+E M R +P +V+S
Sbjct: 95 QKLDSFSFLAL--DLCNFGSFEKALSVVERM-IERNWPVAEVWSSIVRCSQEFVGKSDDG 151
Query: 348 --YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKS 403
+ +L + + KG + ++ P + L+ LL N+L D
Sbjct: 152 VLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRL------DLF 205
Query: 404 LEVYNSMLQNAIRPNTIICNHILRVHCREG--------------QFREA-------LTLL 442
+VY M++ + + + ++ HCR G +FR A L L
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265
Query: 443 EDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKE 502
E +G+ +Y+Y+ +I +CK + A L+ M V YS LI G K
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK- 324
Query: 503 QSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM 562
R + A L EM G Y Y C I K ++ A LFD M
Sbjct: 325 -----------GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGM 373
Query: 563 KRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILL 604
G+ P Y LI Y + + + +L EMK I++
Sbjct: 374 IASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVI 415
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 104/433 (24%), Positives = 200/433 (46%), Gaps = 29/433 (6%)
Query: 175 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 234
++ ++L+ +A+NS E + F + G +L SC L+ L
Sbjct: 154 IIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKE 213
Query: 235 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
++ PN+ T+ ++++ G + A +++ + G +P VV+Y T I G C+ G
Sbjct: 214 MIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGG 273
Query: 291 VDVAHK----LVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 346
+K L + + P N FN +I GF + + +++V +EM P+V
Sbjct: 274 NGKMYKADAVLKEMVENDVSP-NLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVI 332
Query: 347 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLE 405
SYN L+N C G + ++P+++ Y +LI CKN + ++L+
Sbjct: 333 SYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKN-----DMLKEALD 387
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
++ S+ P T + N ++ +C+ G+ + L E+ +GI + +YN +I +C
Sbjct: 388 MFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLC 447
Query: 466 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQ 525
+ + A +L ++ + LP +V + L+ G+ ++ E A L +
Sbjct: 448 RNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGYCRKG------------ESRKAAMLLK 494
Query: 526 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM-KRKGIFPDVVTYTVLIAWYHKH 584
EMS++G P TY ++ G+CK + AT + +M K + + +V +Y VL+ Y +
Sbjct: 495 EMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQK 554
Query: 585 GRIGEKNKLFGEM 597
G++ + N L EM
Sbjct: 555 GKLEDANMLLNEM 567
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 175/404 (43%), Gaps = 40/404 (9%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKC---LXXXXXXXXXX 229
+V FNV+I + A V K G ++ S N L+ L
Sbjct: 222 NVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKAD 281
Query: 230 XXXXXLMETGPLPNIHTYTIMMSC--------GDIRLAAEILGKIYRSGGNPTVVTYGTY 281
++E PN+ T+ I++ G +++ E+L + + P V++Y +
Sbjct: 282 AVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVK----PNVISYNSL 337
Query: 282 IRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRT 341
I GLC G + A + K+ N +NA+I+GFC+ + EAL++ +K
Sbjct: 338 INGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGA 397
Query: 342 FPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNK--LKGQQ 398
P YNML++A+CK G + I P + Y LI LC+N ++
Sbjct: 398 VPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKK 457
Query: 399 LYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYN 458
L+D+ L + P+ + + ++ +CR+G+ R+A LL++ + G+ +YN
Sbjct: 458 LFDQ--------LTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN 509
Query: 459 EIIHMICKESYPKMALELMPRMLK-RNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREM 517
++ CKE K A + +M K R + V +Y+ L+ G++++ ++
Sbjct: 510 IVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG------------KL 557
Query: 518 NVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI-DLATQLFD 560
A L EM G +PN TY + + ++ D+ LF+
Sbjct: 558 EDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEGHLFN 601
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 109/228 (47%), Gaps = 26/228 (11%)
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
VY M++ I+PN N ++ C+ G+ +A ++ED G + N SYN +I C
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 466 K-ESYPKM--ALELMPRMLKRNVLPGVVNYSTLISGFAKEQS---NFEMVERLFTREM-- 517
K KM A ++ M++ +V P + ++ LI GF K+ + + ++ + + +++
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 518 NV------------------ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLF 559
NV A ++ +M G PNL TY LI+GFCK D + A +F
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMF 389
Query: 560 DEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDG 607
+K +G P Y +LI Y K G+I + L EM+ I+ D G
Sbjct: 390 GSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVG 437
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/404 (26%), Positives = 183/404 (45%), Gaps = 25/404 (6%)
Query: 204 GLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLA 259
G++ + + N L+K L + G +P+ T+T +M GD+ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243
Query: 260 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCK--LHPLNSHCFNAVI 317
I ++ G + + V+ + G C+ G V+ A ++++ + P + + FN ++
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFP-DQYTFNTLV 302
Query: 318 HGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIK 377
+G C+ G V A+E+++ M PDVY+YN +++ CK G+V
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 378 PSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFR 436
P+ V Y +LI LCK + +++ E+ + I P+ N +++ C R
Sbjct: 363 PNTVTYNTLISTLCK-----ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHR 417
Query: 437 EALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLI 496
A+ L E+ +G ++++YN +I +C + AL ++ +M V+ Y+TLI
Sbjct: 418 VAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLI 477
Query: 497 SGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLAT 556
GF K TRE A +F EM G N TY LIDG CK ++ A
Sbjct: 478 DGFCKANK---------TRE---AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAA 525
Query: 557 QLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 600
QL D+M +G PD TY L+ + + G I + + M +N
Sbjct: 526 QLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN 569
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 154/338 (45%), Gaps = 18/338 (5%)
Query: 268 RSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVN 327
+ G P T+ T + GLC+ G+V A +++ + + + + + +N+VI G C+ G V
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347
Query: 328 EALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI 387
EA+EVL++M + P+ +YN L++ CK+ V I P + + SLI
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 388 L-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFH 446
LC + + ++E++ M P+ N ++ C +G+ EAL +L+
Sbjct: 408 QGLCLTR-----NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Query: 447 EQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNF 506
G + +YN +I CK + + A E+ M V V Y+TLI G K
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCK----- 517
Query: 507 EMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKG 566
+R + A L +M G P+ YTY L+ FC+ I A + M G
Sbjct: 518 -------SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNG 570
Query: 567 IFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILL 604
PD+VTY LI+ K GR+ +KL ++ I L
Sbjct: 571 CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 167/369 (45%), Gaps = 28/369 (7%)
Query: 237 ETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 292
+ G P+ +T+ +++ G ++ A EI+ + + G +P V TY + I GLC+ G V
Sbjct: 288 QDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVK 347
Query: 293 VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLL 352
A +++ ++ + N+ +N +I C+ V EA E+ + S PDV ++N L+
Sbjct: 348 EAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLI 407
Query: 353 NAFC--KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLEVYN 408
C + V C+ P Y LI L K KL D++L +
Sbjct: 408 QGLCLTRNHRVAMELFEEMRSKGCE--PDEFTYNMLIDSLCSKGKL------DEALNMLK 459
Query: 409 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 468
M + + I N ++ C+ + REA + ++ G++ N +YN +I +CK
Sbjct: 460 QMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 519
Query: 469 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMS 528
+ A +LM +M+ P Y++L++ F + ++ A + Q M+
Sbjct: 520 RVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCR------------GGDIKKAADIVQAMT 567
Query: 529 RIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIG 588
GC P++ TY LI G CK +++A++L ++ KGI Y +I + +
Sbjct: 568 SNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTT 627
Query: 589 EKNKLFGEM 597
E LF EM
Sbjct: 628 EAINLFREM 636
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 93/193 (48%), Gaps = 5/193 (2%)
Query: 172 HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXX 231
SV+ +N LI F + A ++F + G+ + + N L+ L
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527
Query: 232 XXXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE 287
++ G P+ +TY +++ GDI+ AA+I+ + +G P +VTYGT I GLC+
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587
Query: 288 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM-KSSRTFPDVY 346
G V+VA KL+R + K L H +N VI G ++ EA+ + EM + + PD
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAV 647
Query: 347 SYNMLLNAFCKKG 359
SY ++ C G
Sbjct: 648 SYRIVFRGLCNGG 660
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 91/406 (22%), Positives = 159/406 (39%), Gaps = 56/406 (13%)
Query: 130 IIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHH----SVLVFNVLIKVFA 185
I+ G +V+ I G CK + E L + + + +N LI
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC 376
Query: 186 SNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIH 245
+ +E A ++ + G+ + + N L++ L + G P+
Sbjct: 377 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436
Query: 246 TYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKL 301
TY +++ S G + A +L ++ SG +V+TY T I G C+ A ++ ++
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 302 HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDV 361
NS +N +I G C+ V +A +++++M PD Y+YN LL FC+ GD+
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDI 556
Query: 362 XXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTII 421
+P IV Y +LI S L
Sbjct: 557 KKAADIVQAMTSNGCEPDIVTYGTLI---------------------SGL---------- 585
Query: 422 CNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRML 481
C+ G+ A LL +GINL ++YN +I + ++ A+ L ML
Sbjct: 586 --------CKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREML 637
Query: 482 KRN-VLPGVVNYSTLISGFA------KEQSNF--EMVERLFTREMN 518
++N P V+Y + G +E +F E++E+ F E +
Sbjct: 638 EQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFS 683
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 136/337 (40%), Gaps = 20/337 (5%)
Query: 272 NPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE 331
+P Y + L G D K++ + + + F +I + Q +E L
Sbjct: 80 SPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILS 139
Query: 332 VLEEMKSSRTF-PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LL 389
V++ M PD + YN +LN + IKP + + LI L
Sbjct: 140 VVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 199
Query: 390 CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQG 449
C+ QL L + M + P+ +++ + EG AL + E E G
Sbjct: 200 CR----AHQLRPAIL-MLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFG 254
Query: 450 INLNQYSYNEIIHMICKESYPKMALELMPRMLKRN-VLPGVVNYSTLISGFAKEQSNFEM 508
+ + S N I+H CKE + AL + M ++ P ++TL++G K
Sbjct: 255 CSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHA 314
Query: 509 VERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIF 568
+E + + QE G P++YTY +I G CK+ + A ++ D+M +
Sbjct: 315 IE--------IMDVMLQE----GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 569 PDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
P+ VTY LI+ K ++ E +L + + IL D
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 111/466 (23%), Positives = 205/466 (43%), Gaps = 37/466 (7%)
Query: 172 HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXX 231
H++ +N+LI F S + A + +G E I + + LL
Sbjct: 118 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 232 XXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE 287
++E G P+ T+T ++ A ++ ++ + G P +VTYG + GLC+
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 237
Query: 288 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 347
G +D+A L+ K+ N ++ VI C+ ++AL + EM++ P+V +
Sbjct: 238 RGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVIT 297
Query: 348 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKL-KGQQLYDKSL 404
Y+ L++ C +I P++V + +LI + + KL + ++LYD+
Sbjct: 298 YSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDE-- 355
Query: 405 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
M++ +I P+ + ++ C + EA + E + N +YN +I+
Sbjct: 356 -----MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410
Query: 465 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF--AKEQSNFEMVERLFTRE------ 516
CK +EL M +R ++ V Y+TLI GF A++ N +MV + +
Sbjct: 411 CKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNI 470
Query: 517 ---------------MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE 561
+ A +F+ + R P +YTY +I+G CK ++ LF
Sbjct: 471 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCS 530
Query: 562 MKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDG 607
+ KG+ PDV+ Y +I+ + + G E + LF +M+ + L D G
Sbjct: 531 LSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSG 576
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 24/231 (10%)
Query: 391 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 450
+N L +L D ++ ++ M+++ P+ N +L + +F ++L E GI
Sbjct: 58 RNGLHSMKL-DDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGI 116
Query: 451 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF--AKEQSNF-- 506
+ N Y+YN +I+ C+ S +AL L+ +M+K P +V S+L++G+ K S+
Sbjct: 117 SHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVA 176
Query: 507 ---EMVER-------LFT---------REMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 547
+MVE FT + + A AL M + GC PNL TY +++G C
Sbjct: 177 LVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLC 236
Query: 548 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
K IDLA L ++M+ I +VV Y+ +I K+ + LF EM+
Sbjct: 237 KRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEME 287
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 106/475 (22%), Positives = 213/475 (44%), Gaps = 26/475 (5%)
Query: 119 GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDL---PHHSVL 175
GF +V + ++ A+ M E +L+ +V + + F +L+++ P L
Sbjct: 113 GFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFL 172
Query: 176 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 235
V + L+ + + A Q F ++ ++ IR C LL + +
Sbjct: 173 V-DALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEI 231
Query: 236 METGPLPNIHTYTIMMS--C--GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 291
++ G N++ + I+M+ C G+I A ++ +I + PTVV++ T I G C+ G +
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL 291
Query: 292 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 351
D +L ++ + ++A+I+ C+ ++ A + +EM P+ + L
Sbjct: 292 DEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTL 351
Query: 352 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSM 410
++ + G++ ++P IV Y +L+ CKN G + ++ + + M
Sbjct: 352 IHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKN---GDLVAARN--IVDGM 406
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
++ +RP+ I ++ CR G AL + ++ + GI L++ ++ ++ +CKE
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI 530
A + ML+ + P V Y+ ++ F K+ + L +EM
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKG------------DAQTGFKLLKEMQSD 514
Query: 531 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
G +P++ TY L++G CK+ + A L D M G+ PD +TY L+ +H+H
Sbjct: 515 GHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHA 569
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/337 (26%), Positives = 149/337 (44%), Gaps = 72/337 (21%)
Query: 272 NPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE 331
NPT +G Y+ + + G+ PLN + FN +++ FC+ G +++A +
Sbjct: 219 NPTGTIWGFYME-ILDAGF----------------PLNVYVFNILMNKFCKEGNISDAQK 261
Query: 332 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLC 390
V +E+ P V S+N L+N +CK G++ + +P + Y++LI LC
Sbjct: 262 VFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALC 321
Query: 391 K-NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQG 449
K NK+ G +++ M + + PN +I ++ H R G+
Sbjct: 322 KENKMDGAH------GLFDEMCKRGLIPNDVIFTTLIHGHSRNGEID------------- 362
Query: 450 INLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV 509
+ KESY KM L + + P +V Y+TL++GF K N ++V
Sbjct: 363 --------------LMKESYQKM--------LSKGLQPDIVLYNTLVNGFCK---NGDLV 397
Query: 510 ERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFP 569
A + M R G P+ TYT LIDGFC+ ++ A ++ EM + GI
Sbjct: 398 ---------AARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIEL 448
Query: 570 DVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 606
D V ++ L+ K GR+ + + EM I DD
Sbjct: 449 DRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDD 485
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 137/333 (41%), Gaps = 27/333 (8%)
Query: 150 IVGYCKCDDSFEQFSTLLDLPHH--------SVLVFNVLIKVFASNSMLEHAHQVFVSAK 201
I GYCK + E F L H V ++ LI + ++ AH +F
Sbjct: 282 INGYCKVGNLDEGFR----LKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMC 337
Query: 202 NVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIR 257
GL + L+ ++ G P+I Y +++ GD+
Sbjct: 338 KRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLV 397
Query: 258 LAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVI 317
A I+ + R G P +TY T I G C G V+ A ++ +++ L+ F+A++
Sbjct: 398 AARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALV 457
Query: 318 HGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIK 377
G C+ G V +A L EM + PD +Y M+++AFCKKGD
Sbjct: 458 CGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV 517
Query: 378 PSIVNYTSLI-LLCK-NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 435
PS+V Y L+ LCK ++K + + ++ML + P+ I N +L H R
Sbjct: 518 PSVVTYNVLLNGLCKLGQMKNADM------LLDAMLNIGVVPDDITYNTLLEGHHRHANS 571
Query: 436 REALTLLEDFHEQGINLNQYSYNEIIHMICKES 468
+ E GI + SY I++ + + S
Sbjct: 572 SKRYIQKP---EIGIVADLASYKSIVNELDRAS 601
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 4/137 (2%)
Query: 476 LMPRMLKRNVLPGVVNY--STLISGFAKEQSNFEMVERLFTREMNVACA--LFQEMSRIG 531
L+ RM+K N + + L +GF F ++ F +E N++ A +F E+++
Sbjct: 211 LLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRS 270
Query: 532 CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKN 591
P + ++ LI+G+CK+ +D +L +M++ PDV TY+ LI K ++ +
Sbjct: 271 LQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAH 330
Query: 592 KLFGEMKANCILLDDGI 608
LF EM ++ +D I
Sbjct: 331 GLFDEMCKRGLIPNDVI 347
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 175/400 (43%), Gaps = 55/400 (13%)
Query: 243 NIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 298
+++++TI++ C + A +LGK+ + G P++VT+G+ + G C + A LV
Sbjct: 105 DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLV 164
Query: 299 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
+ + N +N +I G C+ G +N ALE+L EM+ DV +YN LL C
Sbjct: 165 ILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYS 224
Query: 359 GDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 418
G I P +V +T+LI + Q D++ E+Y M+Q+++ PN
Sbjct: 225 GRWSDAARMLRDMMKRSINPDVVTFTALI----DVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 419 TIICNHILRVHCREG--------------------------------QFR---EALTLLE 443
+ N I+ C G +FR E + L +
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340
Query: 444 DFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ 503
+G N + ++YN +IH C+ ++AL++ M+ R V P ++ + L+ G
Sbjct: 341 RMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLC--- 397
Query: 504 SNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 563
E+ A F +M + Y +I G CK D ++ A +LF +
Sbjct: 398 ---------VNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLP 448
Query: 564 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 603
+G+ PD TYT++I K+G E ++L MK I+
Sbjct: 449 VEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 181/462 (39%), Gaps = 72/462 (15%)
Query: 111 FGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLP 170
F +E +G SH + F I+IH F C+C
Sbjct: 93 FSQKMELYGISHDLYSFTILIHCF-------------------CRC-------------- 119
Query: 171 HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXX 230
S L A V +G E I + LL
Sbjct: 120 -----------------SRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162
Query: 231 XXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLC 286
++++G PN+ Y ++ G++ +A E+L ++ + G VVTY T + GLC
Sbjct: 163 LVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLC 222
Query: 287 ECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 346
G A +++R + + + F A+I F ++G ++EA E+ +EM S P+
Sbjct: 223 YSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNV 282
Query: 347 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLE 405
+YN ++N C G + P++V Y +LI CK + + D+ ++
Sbjct: 283 TYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR-----MVDEGMK 337
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
++ M + N ++ +C+ G+ R AL + + + + ++ ++H +C
Sbjct: 338 LFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLC 397
Query: 466 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQ 525
+ AL M + G+V Y+ +I G K + VE+ A LF
Sbjct: 398 VNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKA----DKVEK--------AWELFC 445
Query: 526 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 567
+ G P+ TYT +I G CK A +L MK +GI
Sbjct: 446 RLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 20/225 (8%)
Query: 375 QIKPSIVNYTSLILLCKNKLKGQQL--YDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 432
Q PSIV++T L+ N + + + + + +E+Y + + + TI+ + CR
Sbjct: 66 QPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYG--ISHDLYSFTIL----IHCFCRC 119
Query: 433 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 492
+ AL++L + G + ++ ++H C + A L+ M+K P VV Y
Sbjct: 120 SRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVY 179
Query: 493 STLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 552
+TLI G K E+N+A L EM + G ++ TY L+ G C
Sbjct: 180 NTLIDGLCKNG------------ELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 553 DLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
A ++ +M ++ I PDVVT+T LI + K G + E +L+ EM
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEM 272
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 400 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 459
++ + ++ M+ + P+ + +L ++ + + GI+ + YS+
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 460 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNV 519
+IH C+ S AL ++ +M+K P +V + +L+ GF +V R+
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFC-------LVNRI-----GD 159
Query: 520 ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 579
A +L M + G PN+ Y LIDG CK +++A +L +EM++KG+ DVVTY L+
Sbjct: 160 AFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219
Query: 580 WYHKHGRIGEKNKLFGEMKANCILLDDGIKKLQDPKLVQF 619
GR + + +L D +K+ +P +V F
Sbjct: 220 GLCYSGRWSDAAR----------MLRDMMKRSINPDVVTF 249
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 146 bits (368), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 211/489 (43%), Gaps = 67/489 (13%)
Query: 121 SHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCK-----CDDSFEQFSTLLDL--PHHS 173
S+ + F +IH A + L++ ++ K + S F+ L D+ P S
Sbjct: 72 SNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFS 131
Query: 174 VLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXX 233
+ VF++LI F + E A V ++ + ++C +L L
Sbjct: 132 IGVFSLLIMEFLEMGLFEEALWV---SREMKCSPDSKACLSILNGLVRRRRFDSVWVDYQ 188
Query: 234 XLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECG 289
++ G +P++H Y ++ C G ++L ++ G P V Y YI LC
Sbjct: 189 LMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLC--- 245
Query: 290 YVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 349
+ + EA ++ E MK P++Y+Y+
Sbjct: 246 --------------------------------RDNKMEEAEKMFELMKKHGVLPNLYTYS 273
Query: 350 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYN 408
+++ +CK G+V ++ P++V + +L+ CK + + + +SL V+
Sbjct: 274 AMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKAR---ELVTARSLFVH- 329
Query: 409 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 468
M++ + PN + N ++ HC+ G EA+ LL + ++ + ++Y +I+ +C E
Sbjct: 330 -MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIED 388
Query: 469 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMS 528
A L +M + P Y++LI G+ KE + M A L EM+
Sbjct: 389 QVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYN------------MEQALDLCSEMT 436
Query: 529 RIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIG 588
G PN+ T++ LIDG+C + I A L+ EM KGI PDVVTYT LI + K +
Sbjct: 437 ASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMK 496
Query: 589 EKNKLFGEM 597
E +L+ +M
Sbjct: 497 EALRLYSDM 505
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 181/376 (48%), Gaps = 30/376 (7%)
Query: 239 GPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
G LPN++TY+ M+ G++R A + +I + P VV +GT + G C+ + A
Sbjct: 264 GVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTA 323
Query: 295 HKL-VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLN 353
L V + + P N + +N +IHG C+ G + EA+ +L EM+S PDV++Y +L+N
Sbjct: 324 RSLFVHMVKFGVDP-NLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILIN 382
Query: 354 AFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQ 412
C + V +I PS Y SLI CK + +++L++ + M
Sbjct: 383 GLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCK-----EYNMEQALDLCSEMTA 437
Query: 413 NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 472
+ + PN I + ++ +C + A+ L + +GI + +Y +I KE+ K
Sbjct: 438 SGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKE 497
Query: 473 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGC 532
AL L ML+ + P ++ L+ GF KE ++VA +QE ++
Sbjct: 498 ALRLYSDMLEAGIHPNDHTFACLVDGFWKEG------------RLSVAIDFYQENNQQRS 545
Query: 533 LPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNK 592
N +TCLI+G C+ YI A++ F +M+ GI PD+ +Y ++ + + RI +
Sbjct: 546 CWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDT-- 603
Query: 593 LFGEMKANCILLDDGI 608
M C ++ GI
Sbjct: 604 ----MMLQCDMIKTGI 615
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 136/308 (44%), Gaps = 20/308 (6%)
Query: 292 DVAHKLVRKLHCKLHP-LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
+++H+L L P + F+ +I F + G EAL V EMK S PD +
Sbjct: 113 NMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMKCS---PDSKACLS 169
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
+LN ++ + P + Y L C Q LY K ++ + M
Sbjct: 170 ILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFK----QGLYSKKEKLLDEM 225
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
I+PN I + CR+ + EA + E + G+ N Y+Y+ +I CK
Sbjct: 226 TSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNV 285
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI 530
+ A L +L +LP VV + TL+ GF K RE+ A +LF M +
Sbjct: 286 RQAYGLYKEILVAELLPNVVVFGTLVDGFCK------------ARELVTARSLFVHMVKF 333
Query: 531 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 590
G PNLY Y CLI G CK + A L EM+ + PDV TYT+LI ++ E
Sbjct: 334 GVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEA 393
Query: 591 NKLFGEMK 598
N+LF +MK
Sbjct: 394 NRLFQKMK 401
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 392 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 451
N L ++ +D Y M+ + P+ I + + ++G + + LL++ GI
Sbjct: 172 NGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIK 231
Query: 452 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVER 511
N Y Y I +C+++ + A ++ M K VLP + YS +I G+ K
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCK---------- 281
Query: 512 LFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 571
T + A L++E+ LPN+ + L+DGFCK + A LF M + G+ P++
Sbjct: 282 --TGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNL 339
Query: 572 VTYTVLIAWYHKHGRIGEKNKLFGEMKA 599
Y LI + K G + E L EM++
Sbjct: 340 YVYNCLIHGHCKSGNMLEAVGLLSEMES 367
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 125/295 (42%), Gaps = 43/295 (14%)
Query: 235 LMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
+++ G PN++ Y ++ G++ A +L ++ +P V TY I GLC
Sbjct: 330 MVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQ 389
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
V A++L +K+ + +S +N++IHG+C+ + +AL++ EM +S P++ +++
Sbjct: 390 VAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFST 449
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
L++ +C D+ I P +V YT+LI K + ++L +Y+ M
Sbjct: 450 LIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALI---DAHFKEANM-KEALRLYSDM 505
Query: 411 LQNAIRPN--TIIC----------------------------NHI-----LRVHCREGQF 435
L+ I PN T C NH+ + C+ G
Sbjct: 506 LEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYI 565
Query: 436 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 490
A D GI + SY ++ +E + L M+K +LP ++
Sbjct: 566 LRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLL 620
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 173/361 (47%), Gaps = 22/361 (6%)
Query: 243 NIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 298
+++++ I++ G+I + ++L ++ G +P VV Y T I G C+ G ++ A L
Sbjct: 162 DVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221
Query: 299 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
++ N + +I+G + G + E+ E+M+ FP++Y+YN ++N CK
Sbjct: 222 FEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKD 281
Query: 359 GDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRP 417
G + +IV Y +LI LC+ + +++ +V + M + I P
Sbjct: 282 GRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCR-----EMKLNEANKVVDQMKSDGINP 336
Query: 418 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
N I N ++ C G+ +AL+L D +G++ + +YN ++ C++ A +++
Sbjct: 337 NLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV 396
Query: 478 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLY 537
M +R + P V Y+ LI FA+ + M A L M +G +P+++
Sbjct: 397 KEMEERGIKPSKVTYTILIDTFARSDN------------MEKAIQLRLSMEELGLVPDVH 444
Query: 538 TYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
TY+ LI GFC ++ A++LF M K P+ V Y +I Y K G KL EM
Sbjct: 445 TYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEM 504
Query: 598 K 598
+
Sbjct: 505 E 505
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 137/293 (46%), Gaps = 17/293 (5%)
Query: 310 SHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXX 369
S+CFN ++ + N+ E KS + DVYS+ +L+ C+ G++
Sbjct: 129 SNCFNYLLTFVVGSSSFNQWWSFFNENKS-KVVLDVYSFGILIKGCCEAGEIEKSFDLLI 187
Query: 370 XXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVH 429
P++V YT+LI C K + ++ D E+ L R T++ N + +
Sbjct: 188 ELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFK-- 245
Query: 430 CREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGV 489
G ++ + E E G+ N Y+YN +++ +CK+ K A ++ M +R V +
Sbjct: 246 --NGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNI 303
Query: 490 VNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKI 549
V Y+TLI G +E ++N A + +M G PNL TY LIDGFC +
Sbjct: 304 VTYNTLIGGLCREM------------KLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 550 DYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
+ A L ++K +G+ P +VTY +L++ + + G K+ EM+ I
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGI 404
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/468 (22%), Positives = 200/468 (42%), Gaps = 31/468 (6%)
Query: 113 SWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHH 172
S+V++ + S++YF ++ + G + + LL +VG SF Q+ + +
Sbjct: 103 SYVQSQSLNLSISYFNEMVDNGFVPGSNCFNY-LLTFVVG----SSSFNQWWSFFNENKS 157
Query: 173 SVLV----FNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXX 228
V++ F +LIK +E + + + G ++ L+
Sbjct: 158 KVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKA 217
Query: 229 XXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRG 284
+ + G + N TYT++++ G + E+ K+ G P + TY +
Sbjct: 218 KDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277
Query: 285 LCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 344
LC+ G A ++ ++ + N +N +I G C+ +NEA +V+++MKS P+
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 345 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKS 403
+ +YN L++ FC G + + PS+V Y L+ C+ KG +
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCR---KGDT--SGA 392
Query: 404 LEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHM 463
++ M + I+P+ + ++ R +A+ L E G+ + ++Y+ +IH
Sbjct: 393 AKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHG 452
Query: 464 ICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACAL 523
C + A L M+++N P V Y+T+I G+ KE S++ A L
Sbjct: 453 FCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYR------------ALKL 500
Query: 524 FQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 571
+EM PN+ +Y +I+ CK A +L ++M GI P
Sbjct: 501 LKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPST 548
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 109/228 (47%), Gaps = 24/228 (10%)
Query: 398 QLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSY 457
Q + S+ +N M+ N P + N++L F + + + ++ + L+ YS+
Sbjct: 108 QSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSKVVLDVYSF 166
Query: 458 NEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK----EQSN---FEMV- 509
+I C+ + + +L+ + + P VV Y+TLI G K E++ FEM
Sbjct: 167 GILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGK 226
Query: 510 ------ERLFTREMN---------VACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDL 554
ER +T +N ++++M G PNLYTY C+++ CK
Sbjct: 227 LGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKD 286
Query: 555 ATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
A Q+FDEM+ +G+ ++VTY LI + ++ E NK+ +MK++ I
Sbjct: 287 AFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 140/565 (24%), Positives = 230/565 (40%), Gaps = 73/565 (12%)
Query: 104 KIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIV------------ 151
K+ K S +E G + +V F +I M G + E F +V
Sbjct: 275 KVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYS 334
Query: 152 ----GYCKCDDSFEQFSTLLDLPHH----SVLVFNVLIKVFASNSMLEHAHQVFVSAKNV 203
G + + + L ++ +V+V+N LI F L A ++ +
Sbjct: 335 ILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 394
Query: 204 GLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYT--IMMSCGDIRL--A 259
GL L + N L+K ++ G N ++T I + C + A
Sbjct: 395 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 454
Query: 260 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHG 319
+G++ +P T I GLC+ G A +L + K +++ NA++HG
Sbjct: 455 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 514
Query: 320 FCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPS 379
C+ G ++EA + +E+ D SYN L++ C K + +KP
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 380 IVNYTSLILLCK----NKLK-GQQLYD----------------------------KSLEV 406
NYT IL+C NK++ Q +D + E
Sbjct: 575 --NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 407 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 466
++ M+ ++PNT++ NH++R +CR G+ AL L ED +GI+ N +Y +I +
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 692
Query: 467 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQE 526
S + A L M + P V +Y+ LI G+ K + + V C L +E
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK-----------LGQMVKVEC-LLRE 740
Query: 527 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 586
M PN TYT +I G+ + + A++L +EM+ KGI PD +TY I Y K G
Sbjct: 741 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGG 800
Query: 587 IGEKNKLFGEMKANCILLDDGIKKL 611
+ E K G + N + +G KL
Sbjct: 801 VLEAFK--GSDEENYAAIIEGWNKL 823
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 187/445 (42%), Gaps = 58/445 (13%)
Query: 193 AHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS 252
A VF N G+ +CN LL L + + G P+++ +T ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 268
Query: 253 C----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA----HKLV------ 298
G + A ++ K+ +G P VVT+ T I GL CG D A K+V
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 299 -------------------------RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL 333
+++ K P N +N +I F + G++N+A+E+
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 334 EEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKN 392
+ M S +YN L+ +CK G + ++TS+I LLC
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS- 447
Query: 393 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 452
++D +L ML + P + ++ C+ G+ +AL L F +G +
Sbjct: 448 ----HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 503
Query: 453 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 512
+ + N ++H +C+ A + +L R + V+Y+TLISG +
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK---------- 553
Query: 513 FTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
++++ A EM + G P+ YTY+ LI G ++ ++ A Q +D+ KR G+ PDV
Sbjct: 554 --KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 611
Query: 573 TYTVLIAWYHKHGRIGEKNKLFGEM 597
TY+V+I K R E + F EM
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEM 636
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 152/357 (42%), Gaps = 54/357 (15%)
Query: 303 CKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVX 362
CK + + F I+ FC+ G V EA+++ +M+ + P+V ++N +++ G
Sbjct: 253 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 363 XXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLY--------------------- 400
++P+++ Y+ L+ L + K G +
Sbjct: 313 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 372
Query: 401 ---------DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 451
+K++E+ + M+ + + N +++ +C+ GQ A LL++ G N
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 452 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN------ 505
+NQ S+ +I ++C AL + ML RN+ PG +TLISG K +
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Query: 506 -FEMVERLFTREMNVACAL---------FQEMSRI-------GCLPNLYTYTCLIDGFCK 548
F+ + + F + + AL E RI GC+ + +Y LI G C
Sbjct: 493 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 552
Query: 549 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
+D A DEM ++G+ PD TY++LI ++ E + + + K N +L D
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 609
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 140/565 (24%), Positives = 230/565 (40%), Gaps = 73/565 (12%)
Query: 104 KIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIV------------ 151
K+ K S +E G + +V F +I M G + E F +V
Sbjct: 275 KVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYS 334
Query: 152 ----GYCKCDDSFEQFSTLLDLPHH----SVLVFNVLIKVFASNSMLEHAHQVFVSAKNV 203
G + + + L ++ +V+V+N LI F L A ++ +
Sbjct: 335 ILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 394
Query: 204 GLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYT--IMMSCGDIRL--A 259
GL L + N L+K ++ G N ++T I + C + A
Sbjct: 395 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSA 454
Query: 260 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHG 319
+G++ +P T I GLC+ G A +L + K +++ NA++HG
Sbjct: 455 LRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHG 514
Query: 320 FCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPS 379
C+ G ++EA + +E+ D SYN L++ C K + +KP
Sbjct: 515 LCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPD 574
Query: 380 IVNYTSLILLCK----NKLK-GQQLYD----------------------------KSLEV 406
NYT IL+C NK++ Q +D + E
Sbjct: 575 --NYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 407 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 466
++ M+ ++PNT++ NH++R +CR G+ AL L ED +GI+ N +Y +I +
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSI 692
Query: 467 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQE 526
S + A L M + P V +Y+ LI G+ K + + V C L +E
Sbjct: 693 ISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGK-----------LGQMVKVEC-LLRE 740
Query: 527 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 586
M PN TYT +I G+ + + A++L +EM+ KGI PD +TY I Y K G
Sbjct: 741 MHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGG 800
Query: 587 IGEKNKLFGEMKANCILLDDGIKKL 611
+ E K G + N + +G KL
Sbjct: 801 VLEAFK--GSDEENYAAIIEGWNKL 823
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 187/445 (42%), Gaps = 58/445 (13%)
Query: 193 AHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS 252
A VF N G+ +CN LL L + + G P+++ +T ++
Sbjct: 210 ALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAIN 268
Query: 253 C----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA----HKLV------ 298
G + A ++ K+ +G P VVT+ T I GL CG D A K+V
Sbjct: 269 AFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEP 328
Query: 299 -------------------------RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL 333
+++ K P N +N +I F + G++N+A+E+
Sbjct: 329 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 388
Query: 334 EEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKN 392
+ M S +YN L+ +CK G + ++TS+I LLC
Sbjct: 389 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCS- 447
Query: 393 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 452
++D +L ML + P + ++ C+ G+ +AL L F +G +
Sbjct: 448 ----HLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVV 503
Query: 453 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 512
+ + N ++H +C+ A + +L R + V+Y+TLISG +
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGK---------- 553
Query: 513 FTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
++++ A EM + G P+ YTY+ LI G ++ ++ A Q +D+ KR G+ PDV
Sbjct: 554 --KKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVY 611
Query: 573 TYTVLIAWYHKHGRIGEKNKLFGEM 597
TY+V+I K R E + F EM
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEM 636
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 152/357 (42%), Gaps = 54/357 (15%)
Query: 303 CKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVX 362
CK + + F I+ FC+ G V EA+++ +M+ + P+V ++N +++ G
Sbjct: 253 CKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYD 312
Query: 363 XXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLY--------------------- 400
++P+++ Y+ L+ L + K G +
Sbjct: 313 EAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLI 372
Query: 401 ---------DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 451
+K++E+ + M+ + + N +++ +C+ GQ A LL++ G N
Sbjct: 373 DSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFN 432
Query: 452 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN------ 505
+NQ S+ +I ++C AL + ML RN+ PG +TLISG K +
Sbjct: 433 VNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALEL 492
Query: 506 -FEMVERLFTREMNVACAL---------FQEMSRI-------GCLPNLYTYTCLIDGFCK 548
F+ + + F + + AL E RI GC+ + +Y LI G C
Sbjct: 493 WFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCG 552
Query: 549 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
+D A DEM ++G+ PD TY++LI ++ E + + + K N +L D
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 609
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 126/535 (23%), Positives = 223/535 (41%), Gaps = 54/535 (10%)
Query: 94 VVRVIKSLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAG---MHLEVFALLRDI 150
V VIK + + F S + GF H+++ +R +I G EV +R+
Sbjct: 10 VTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMREN 69
Query: 151 VGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIR 210
VG H V+ +K + ++ A VF E +
Sbjct: 70 VG-----------------NHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVF 112
Query: 211 SCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIR--LAAEILGKI 266
S N ++ L + + G P+++++TI M C R A +L +
Sbjct: 113 SYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNM 172
Query: 267 YRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAV 326
G VV Y T + G E + ++L K+ L FN ++ C++G V
Sbjct: 173 SSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDV 232
Query: 327 NEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSL 386
E ++L+++ P++++YN+ + C++G++ KP ++ Y +L
Sbjct: 233 KECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNL 292
Query: 387 IL-LCKNKLKGQQLYDKSLEVY-NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 444
I LCKN K Q+ EVY M+ + P++ N ++ +C+ G + A ++ D
Sbjct: 293 IYGLCKNS-KFQE-----AEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD 346
Query: 445 FHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS 504
G +Q++Y +I +C E AL L L + + P V+ Y+TLI G + +
Sbjct: 347 AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGM 406
Query: 505 NFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 564
E A L EMS G +P + T+ L++G CK+ + A L M
Sbjct: 407 ILE------------AAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 565 KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKLQDPKLVQF 619
KG FPD+ T+ +LI Y ++ ++ ++LD+G+ DP + +
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILD------VMLDNGV----DPDVYTY 499
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 112/454 (24%), Positives = 178/454 (39%), Gaps = 63/454 (13%)
Query: 176 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 235
+N LI + M++ A ++ A G + L+ L
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382
Query: 236 METGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 291
+ G PN+ Y ++ G I AA++ ++ G P V T+ + GLC+ G V
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442
Query: 292 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 351
A LV+ + K + + FN +IHG+ + + ALE+L+ M + PDVY+YN L
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502
Query: 352 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML 411
LN CK ++ +E Y +M+
Sbjct: 503 LNGLCKTSK---------------------------------------FEDVMETYKTMV 523
Query: 412 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 471
+ PN N +L CR + EAL LLE+ + +N + ++ +I CK
Sbjct: 524 EKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLD 583
Query: 472 MALELMPRMLKR-NVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI 530
A L +M + V Y+ +I F E+ N M E+ LFQEM
Sbjct: 584 GAYTLFRKMEEAYKVSSSTPTYNIIIHAFT-EKLNVTMAEK-----------LFQEMVDR 631
Query: 531 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 590
P+ YTY ++DGFCK ++L + EM G P + T +I R+ E
Sbjct: 632 CLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEA 691
Query: 591 NKLFGEM-------KANCILLDDGIKKLQDPKLV 617
+ M +A + D K++ PKLV
Sbjct: 692 AGIIHRMVQKGLVPEAVNTICDVDKKEVAAPKLV 725
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 99/195 (50%), Gaps = 7/195 (3%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
+ FN+LI +++ +E+A ++ + G++ + + N LL L
Sbjct: 460 DIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETY 519
Query: 233 XXLMETGPLPNIHTYTIMM-SCGDIRLAAEILG---KIYRSGGNPTVVTYGTYIRGLCEC 288
++E G PN+ T+ I++ S R E LG ++ NP VT+GT I G C+
Sbjct: 520 KTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579
Query: 289 GYVDVAHKLVRKLHCKLHPLNSH--CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 346
G +D A+ L RK+ + + ++S +N +IH F ++ V A ++ +EM PD Y
Sbjct: 580 GDLDGAYTLFRKME-EAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGY 638
Query: 347 SYNMLLNAFCKKGDV 361
+Y ++++ FCK G+V
Sbjct: 639 TYRLMVDGFCKTGNV 653
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 122/475 (25%), Positives = 207/475 (43%), Gaps = 28/475 (5%)
Query: 138 GMHLEVFALLRDIVGYCKCDDSFEQFSTLLDL-----PHHSVLVFNVLIKVFASNSMLEH 192
G+ + V A I G+CK +D L D P + + F+VLI+ F N +E
Sbjct: 334 GISMNVVAATSLITGHCKNNDLVSAL-VLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEK 392
Query: 193 AHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS 252
A + + + +GL + + +++ ETG L N+ ++S
Sbjct: 393 ALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETG-LANVFVCNTILS 451
Query: 253 C----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPL 308
G A E+L K+ G P VV+Y + G C +D+A + + K
Sbjct: 452 WLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKP 511
Query: 309 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 368
N++ ++ +I G + ALEV+ M SS + Y ++N CK G
Sbjct: 512 NNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELL 571
Query: 369 XXX-XXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 427
++ S ++Y S+I + + D ++ Y M N I PN I ++
Sbjct: 572 ANMIEEKRLCVSCMSYNSII----DGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMN 627
Query: 428 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 487
C+ + +AL + ++ +G+ L+ +Y +I CK S + A L +L+ + P
Sbjct: 628 GLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNP 687
Query: 488 GVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 547
Y++LISGF M A L+++M + G +L TYT LIDG
Sbjct: 688 SQPIYNSLISGFRN------------LGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLL 735
Query: 548 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
K + LA++L+ EM+ G+ PD + YTV++ K G+ + K+F EMK N +
Sbjct: 736 KDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNV 790
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 171/361 (47%), Gaps = 28/361 (7%)
Query: 255 DIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHC-KLHPLNSHCF 313
D+ A + K+ + G +P VT+ I + G ++ A + +K+ L P H
Sbjct: 354 DLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHV- 412
Query: 314 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 373
+ +I G+ + EAL++ +E + +V+ N +L+ CK+G
Sbjct: 413 HTIIQGWLKGQKHEEALKLFDESFET-GLANVFVCNTILSWLCKQGKTDEATELLSKMES 471
Query: 374 CQIKPSIVNYTSLILL-CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 432
I P++V+Y +++L C+ Q+ D + V++++L+ ++PN + ++ R
Sbjct: 472 RGIGPNVVSYNNVMLGHCR-----QKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRN 526
Query: 433 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL-PGVVN 491
+ AL ++ I +N Y II+ +CK A EL+ M++ L ++
Sbjct: 527 HDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMS 586
Query: 492 YSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 551
Y+++I GF KE EM+ A A ++EM G PN+ TYT L++G CK +
Sbjct: 587 YNSIIDGFFKEG------------EMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNR 634
Query: 552 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKL 611
+D A ++ DEMK KG+ D+ Y LI + K + + LF E LL++G+
Sbjct: 635 MDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSE------LLEEGLNPS 688
Query: 612 Q 612
Q
Sbjct: 689 Q 689
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 167/376 (44%), Gaps = 28/376 (7%)
Query: 239 GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
GP PN T+++++ G++ A E K+ G P+V T I+G + + A
Sbjct: 369 GPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEA 428
Query: 295 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 354
KL + + N N ++ C++G +EA E+L +M+S P+V SYN ++
Sbjct: 429 LKLFDE-SFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLG 487
Query: 355 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 414
C++ ++ +KP+ Y+ LI C Q +LEV N M +
Sbjct: 488 HCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQN----ALEVVNHMTSSN 543
Query: 415 IRPNTIICNHILRVHCREGQFREALTLLEDF-HEQGINLNQYSYNEIIHMICKESYPKMA 473
I N ++ I+ C+ GQ +A LL + E+ + ++ SYN II KE A
Sbjct: 544 IEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSA 603
Query: 474 LELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCL 533
+ M + P V+ Y++L++G K M+ A + EM G
Sbjct: 604 VAAYEEMCGNGISPNVITYTSLMNGLCK------------NNRMDQALEMRDEMKNKGVK 651
Query: 534 PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL 593
++ Y LIDGFCK ++ A+ LF E+ +G+ P Y LI+ + G + L
Sbjct: 652 LDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDL 711
Query: 594 FGEMKANCILLDDGIK 609
+ +M L DG++
Sbjct: 712 YKKM------LKDGLR 721
Score = 113 bits (283), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 170/357 (47%), Gaps = 29/357 (8%)
Query: 273 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 332
P+ TY + I + G +D A +L ++ +N ++I G C+ + AL +
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 333 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 392
++M+ P+ ++++L+ F K G++ + PS+ + ++I +
Sbjct: 362 FDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTII---QG 418
Query: 393 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 452
LKGQ+ ++++L++++ + + N +CN IL C++G+ EA LL +GI
Sbjct: 419 WLKGQK-HEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGP 476
Query: 453 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK---EQSNFEMV 509
N SYN ++ C++ +A + +L++ + P YS LI G + EQ+ E+V
Sbjct: 477 NVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVV 536
Query: 510 ERLFTREMNVACALFQE----MSRIG-------CLPNL----------YTYTCLIDGFCK 548
+ + + V ++Q + ++G L N+ +Y +IDGF K
Sbjct: 537 NHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFK 596
Query: 549 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
+D A ++EM GI P+V+TYT L+ K+ R+ + ++ EMK + LD
Sbjct: 597 EGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLD 653
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 108/248 (43%), Gaps = 18/248 (7%)
Query: 328 EALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQI-KPSIVNYTSL 386
EALEVL PD Y++ + A CK D+ ++ PS YTS+
Sbjct: 251 EALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSV 310
Query: 387 ILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFH 446
IL Q D ++ + + ML + I N + ++ HC+ AL L +
Sbjct: 311 ILASVK----QGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKME 366
Query: 447 EQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNF 506
++G + N +++ +I K + ALE +M + P V + T+I G+ K Q +
Sbjct: 367 KEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHE 426
Query: 507 EMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKG 566
E A LF E G L N++ ++ CK D AT+L +M+ +G
Sbjct: 427 E------------ALKLFDESFETG-LANVFVCNTILSWLCKQGKTDEATELLSKMESRG 473
Query: 567 IFPDVVTY 574
I P+VV+Y
Sbjct: 474 IGPNVVSY 481
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 99/486 (20%), Positives = 178/486 (36%), Gaps = 88/486 (18%)
Query: 84 PETNRELFHVVVRVIKSLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEV 143
P N F V++ + N ++ + +F +E G + SV + II + H E
Sbjct: 370 PSPNSVTFSVLIEWFRK-NGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEA 428
Query: 144 FALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNV 203
L D+SFE +V V N ++ + A ++ ++
Sbjct: 429 LKLF---------DESFET-------GLANVFVCNTILSWLCKQGKTDEATELLSKMESR 472
Query: 204 GLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLA 259
G+ ++ S N ++ ++E G PN +TY+I++ D + A
Sbjct: 473 GIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNA 532
Query: 260 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVR-------------------- 299
E++ + S V Y T I GLC+ G A +L+
Sbjct: 533 LEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIID 592
Query: 300 ------KLHCKLHPLNSHCFNAV----------IHGFCQRGAVNEALEVLEEMKSSRTFP 343
++ + C N + ++G C+ +++ALE+ +EMK+
Sbjct: 593 GFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKL 652
Query: 344 DVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN---KLKGQQLY 400
D+ +Y L++ FCK+ ++ + PS Y SLI +N + LY
Sbjct: 653 DIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLY 712
Query: 401 DKSL----------------------------EVYNSMLQNAIRPNTIICNHILRVHCRE 432
K L E+Y M + P+ II I+ ++
Sbjct: 713 KKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKK 772
Query: 433 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 492
GQF + + + E+ + + N YN +I +E A L ML + +LP +
Sbjct: 773 GQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATF 832
Query: 493 STLISG 498
L+SG
Sbjct: 833 DILVSG 838
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 116/255 (45%), Gaps = 21/255 (8%)
Query: 347 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKP--SIVNYTSLILLCKNKLKGQQLYDKSL 404
++N LLNA+ K + P VN T L+ +N L ++
Sbjct: 165 AFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLT------EAK 218
Query: 405 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
E+Y+ M+ + + + ++R RE + EAL +L E+G + Y+ +
Sbjct: 219 ELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQAC 278
Query: 465 CKESYPKMALELMPRMLKRNV-LPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACAL 523
CK MA L+ M ++ + +P Y+++I K+ + M+ A L
Sbjct: 279 CKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGN------------MDDAIRL 326
Query: 524 FQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHK 583
EM G N+ T LI G CK + + A LFD+M+++G P+ VT++VLI W+ K
Sbjct: 327 KDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRK 386
Query: 584 HGRIGEKNKLFGEMK 598
+G + + + + +M+
Sbjct: 387 NGEMEKALEFYKKME 401
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 211/496 (42%), Gaps = 59/496 (11%)
Query: 110 KFGSWV-ETHGF--SHSVNYFRIIIHTFAMAGMHLEVFALLRDI-VGYCKCDDSFEQFST 165
KF WV + G H V I H A M+ +L+++ + K F T
Sbjct: 95 KFLKWVVKQPGLETDHIVQLVCITTHILVRARMYDPARHILKELSLMSGKSSFVFGALMT 154
Query: 166 LLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXX 225
L + + V+++LI+V+ M++ + ++F G + +CN +L +
Sbjct: 155 TYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGED 214
Query: 226 XXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTY 281
+++ P++ T+ I+++ G ++ ++ K+ +SG PT+VTY
Sbjct: 215 VSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY--- 271
Query: 282 IRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRT 341
N V+H +C++G A+E+L+ MKS
Sbjct: 272 --------------------------------NTVLHWYCKKGRFKAAIELLDHMKSKGV 299
Query: 342 FPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYD 401
DV +YNML++ C+ + I P+ V Y +LI N +
Sbjct: 300 DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI----NGFSNEGKVL 355
Query: 402 KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEII 461
+ ++ N ML + PN + N ++ H EG F+EAL + +G+ ++ SY ++
Sbjct: 356 IASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLL 415
Query: 462 HMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVAC 521
+CK + +A RM + V G + Y+ +I G K F E A
Sbjct: 416 DGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNG---------FLDE---AV 463
Query: 522 ALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWY 581
L EMS+ G P++ TY+ LI+GFCK+ A ++ + R G+ P+ + Y+ LI
Sbjct: 464 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 523
Query: 582 HKHGRIGEKNKLFGEM 597
+ G + E +++ M
Sbjct: 524 CRMGCLKEAIRIYEAM 539
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 151/365 (41%), Gaps = 54/365 (14%)
Query: 237 ETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 292
+ G P+I TY+ +++ G + A EI+ +IYR G +P + Y T I C G +
Sbjct: 471 KDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLK 530
Query: 293 VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLL 352
A ++ + + H + FN ++ C+ G V EA E + M S P+ S++ L+
Sbjct: 531 EAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLI 590
Query: 353 NAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQ 412
N + G+ K+ V++ M +
Sbjct: 591 NGYGNSGEGL---------------------------------------KAFSVFDEMTK 611
Query: 413 NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 472
P +L+ C+ G REA L+ H ++ YN ++ +CK
Sbjct: 612 VGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAK 671
Query: 473 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGC 532
A+ L M++R++LP Y++LISG ++ ++ LF +E +R
Sbjct: 672 AVSLFGEMVQRSILPDSYTYTSLISGLCRKGKT--VIAILFAKEAE---------ARGNV 720
Query: 533 LPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNK 592
LPN YTC +DG K ++M G PD+VT +I Y + G+I + N
Sbjct: 721 LPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTND 780
Query: 593 LFGEM 597
L EM
Sbjct: 781 LLPEM 785
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/373 (21%), Positives = 153/373 (41%), Gaps = 21/373 (5%)
Query: 235 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
+ G LPN ++ +++ G+ A + ++ + G +PT TYG+ ++GLC+ G+
Sbjct: 574 MTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGH 633
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
+ A K ++ LH +++ +N ++ C+ G + +A+ + EM PD Y+Y
Sbjct: 634 LREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTS 693
Query: 351 LLNAFCKKGD-VXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNS 409
L++ C+KG V + P+ V YT + K Q + +
Sbjct: 694 LISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFV---DGMFKAGQ-WKAGIYFREQ 749
Query: 410 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 469
M P+ + N ++ + R G+ + LL + Q N +YN ++H K
Sbjct: 750 MDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKD 809
Query: 470 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSR 529
+ L ++ +LP + +L+ G +SN + + + +
Sbjct: 810 VSTSFLLYRSIILNGILPDKLTCHSLVLGIC--ESNM----------LEIGLKILKAFIC 857
Query: 530 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 589
G + YT+ LI C I+ A L M GI D T +++ +++ R E
Sbjct: 858 RGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQE 917
Query: 590 KNKLFGEMKANCI 602
+ EM I
Sbjct: 918 SRMVLHEMSKQGI 930
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/535 (20%), Positives = 205/535 (38%), Gaps = 76/535 (14%)
Query: 104 KIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQF 163
K+A ++F + + G + F +I+ + +G L+ F++ F
Sbjct: 563 KVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSV----------------F 606
Query: 164 STLLDLPHH-SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXX 222
+ + HH + + L+K L A + S V + N LL +
Sbjct: 607 DEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKS 666
Query: 223 XXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRLAAEIL-GKIYRSGGN--PTVVT 277
+++ LP+ +TYT ++S C + IL K + GN P V
Sbjct: 667 GNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVM 726
Query: 278 YGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMK 337
Y ++ G+ + G ++ H + NA+I G+ + G + + ++L EM
Sbjct: 727 YTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMG 786
Query: 338 SSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKL-- 394
+ P++ +YN+LL+ + K+ DV I P + SL+L +C++ +
Sbjct: 787 NQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLE 846
Query: 395 -----------KGQQL-----------------YDKSLEVYNSMLQNAIRPNTIICNHIL 426
+G ++ + + ++ M I + C+ ++
Sbjct: 847 IGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMV 906
Query: 427 RVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL 486
V R +F+E+ +L + +QGI+ Y +I+ +C+ K A + M+ +
Sbjct: 907 SVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKIC 966
Query: 487 PGVVNYSTLISGFAKEQSNFEMVERL--------------FTREMNVACA---------L 523
P V S ++ AK E L FT M++ C L
Sbjct: 967 PPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALEL 1026
Query: 524 FQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 578
MS G +L +Y LI G C + LA +L++EMK G + TY LI
Sbjct: 1027 RVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALI 1081
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 124/331 (37%), Gaps = 47/331 (14%)
Query: 242 PNIHTYTIMMSCGDIRLAAEILGKIYRS----GGNPTVVTYGTYIRGLCECGYVDVAHKL 297
PN+ TY I++ R +YRS G P +T + + G+CE +++ K+
Sbjct: 792 PNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKI 851
Query: 298 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE-------------------------- 331
++ C+ ++ + FN +I C G +N A +
Sbjct: 852 LKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNR 911
Query: 332 ---------VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVN 382
VL EM P+ Y L+N C+ GD+ +I P V
Sbjct: 912 NHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 971
Query: 383 YTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLL 442
++++ L D++ + ML+ + P ++ + C+ G EAL L
Sbjct: 972 ESAMV----RALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELR 1027
Query: 443 EDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKE 502
G+ L+ SYN +I +C + +A EL M L Y LI G
Sbjct: 1028 VVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLAR 1087
Query: 503 QSNFE----MVERLFTREMNVACALFQEMSR 529
++ F +++ L R + +L Q+ R
Sbjct: 1088 ETAFSGADIILKDLLARGFITSMSLSQDSHR 1118
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 163/361 (45%), Gaps = 25/361 (6%)
Query: 242 PNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 297
P + T+ ++M + +I A +L + + G P V Y T I L +C V+ A +L
Sbjct: 215 PTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQL 274
Query: 298 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 357
+ ++ ++ FN VI G C+ +NEA +++ M PD +Y L+N CK
Sbjct: 275 LEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCK 334
Query: 358 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQN-AIR 416
G V KP IV + +LI + D + V + M+ + I
Sbjct: 335 IGRVDAAKDLFYRIP----KPEIVIFNTLI----HGFVTHGRLDDAKAVLSDMVTSYGIV 386
Query: 417 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 476
P+ N ++ + +EG AL +L D +G N YSY ++ CK A +
Sbjct: 387 PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNV 446
Query: 477 MPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNL 536
+ M + P V ++ LIS F KE E VE +F+EM R GC P++
Sbjct: 447 LNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVE------------IFREMPRKGCKPDV 494
Query: 537 YTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE 596
YT+ LI G C++D I A L +M +G+ + VTY LI + + G I E KL E
Sbjct: 495 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 554
Query: 597 M 597
M
Sbjct: 555 M 555
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 110/397 (27%), Positives = 193/397 (48%), Gaps = 40/397 (10%)
Query: 239 GPLPNIHTYT--IMMSCGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
G +P+ T+ I+ C R+ AA+++ ++ G P +TYG + GLC+ G VD A
Sbjct: 282 GCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA 341
Query: 295 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF-PDVYSYNMLLN 353
+ L ++ FN +IHGF G +++A VL +M +S PDV +YN L+
Sbjct: 342 ----KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397
Query: 354 AFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCK-NKLKGQQLYDKSLEVYNSML 411
+ K+G V KP++ +YT L+ CK K+ D++ V N M
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKI------DEAYNVLNEMS 451
Query: 412 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 471
+ ++PNT+ N ++ C+E + EA+ + + +G + Y++N +I +C+ K
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 472 MALELMPRMLKRNVLPGVVNYSTLISGFAK----EQSNFEMVERLF-------------- 513
AL L+ M+ V+ V Y+TLI+ F + +++ + E +F
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 514 -----TREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIF 568
E++ A +LF++M R G P+ + LI+G C+ ++ A + EM +G
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 569 PDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
PD+VT+ LI + GRI + +F +++A I D
Sbjct: 632 PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/462 (22%), Positives = 187/462 (40%), Gaps = 99/462 (21%)
Query: 152 GYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRS 211
G CK +P +++FN LI F ++ L+ A V
Sbjct: 331 GLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSD------------ 378
Query: 212 CNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIY 267
+ G +P++ TY ++ G + LA E+L +
Sbjct: 379 ----------------------MVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMR 416
Query: 268 RSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVN 327
G P V +Y + G C+ G +D A+ ++ ++ N+ FN +I FC+ +
Sbjct: 417 NKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIP 476
Query: 328 EALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI 387
EA+E+ EM PDVY++N L++ C+ ++
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK------------------------- 511
Query: 388 LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHE 447
+L + M+ + NT+ N ++ R G+ +EA L+ +
Sbjct: 512 --------------HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVF 557
Query: 448 QGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFE 507
QG L++ +YN +I +C+ A L +ML+ P ++ + LI+G + E
Sbjct: 558 QGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEE 617
Query: 508 MVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 567
VE F +EM + G P++ T+ LI+G C+ I+ +F +++ +GI
Sbjct: 618 AVE--FQKEMVLR----------GSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Query: 568 FPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIK 609
PD VT+ L++W K G + + C+LLD+GI+
Sbjct: 666 PPDTVTFNTLMSWLCKGGFVYDA----------CLLLDEGIE 697
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/436 (22%), Positives = 177/436 (40%), Gaps = 67/436 (15%)
Query: 171 HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXX 230
HS V+ VLI +N + ++ + K+ G+ + + + +
Sbjct: 108 RHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGI---VFKESLFISIMRDYDKAGFPGQ 164
Query: 231 XXXXLMETGPL----PNIHTYT----IMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYI 282
++E + P +Y I++S ++AA + + PT+ T+G +
Sbjct: 165 TTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVM 224
Query: 283 RGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF 342
+ C +D A L+R + NS + +IH + VNEAL++LEEM
Sbjct: 225 KAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCV 284
Query: 343 PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDK 402
PD ++N ++ CK + ++
Sbjct: 285 PDAETFNDVILGLCKFDRI---------------------------------------NE 305
Query: 403 SLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIH 462
+ ++ N ML P+ I +++ C+ G+ A L + I + +N +IH
Sbjct: 306 AAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI----FNTLIH 361
Query: 463 MICKESYPKMALELMPRMLKR-NVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVAC 521
A ++ M+ ++P V Y++LI G+ KE + +A
Sbjct: 362 GFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL------------VGLAL 409
Query: 522 ALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWY 581
+ +M GC PN+Y+YT L+DGFCK+ ID A + +EM G+ P+ V + LI+ +
Sbjct: 410 EVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAF 469
Query: 582 HKHGRIGEKNKLFGEM 597
K RI E ++F EM
Sbjct: 470 CKEHRIPEAVEIFREM 485
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 160/382 (41%), Gaps = 22/382 (5%)
Query: 127 FRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFAS 186
F +IH F G + A+L D+V + + D V +N LI +
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMV---------TSYGIVPD-----VCTYNSLIYGYWK 401
Query: 187 NSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHT 246
++ A +V +N G + ++ S L+ + G PN
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVG 461
Query: 247 YTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH 302
+ ++S C + R+ A EI ++ R G P V T+ + I GLCE + A L+R +
Sbjct: 462 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 521
Query: 303 CKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVX 362
+ N+ +N +I+ F +RG + EA +++ EM + D +YN L+ C+ G+V
Sbjct: 522 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVD 581
Query: 363 XXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIIC 422
PS ++ LI N L + ++++E M+ P+ +
Sbjct: 582 KARSLFEKMLRDGHAPSNISCNILI----NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTF 637
Query: 423 NHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLK 482
N ++ CR G+ + LT+ +GI + ++N ++ +CK + A L+ ++
Sbjct: 638 NSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIE 697
Query: 483 RNVLPGVVNYSTLISGFAKEQS 504
+P +S L+ +++
Sbjct: 698 DGFVPNHRTWSILLQSIIPQET 719
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 136/325 (41%), Gaps = 75/325 (23%)
Query: 316 VIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ 375
++ G C + A N V +M S + P ++++ +++ AFC ++
Sbjct: 192 LVSGNCHKVAAN----VFYDMLSRKIPPTLFTFGVVMKAFCAVNEI-------------- 233
Query: 376 IKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 435
D +L + M ++ PN++I ++ + +
Sbjct: 234 -------------------------DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRV 268
Query: 436 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 495
EAL LLE+ G + ++N++I +CK A +++ RML R P + Y L
Sbjct: 269 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYL 328
Query: 496 ISGFAKEQSNFEMVERLFTR--------------------EMNVACALFQEM-SRIGCLP 534
++G K + + LF R ++ A A+ +M + G +P
Sbjct: 329 MNGLCK-IGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 535 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
++ TY LI G+ K + LA ++ +M+ KG P+V +YT+L+ + K G+I E +
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 595 GEMKANCILLDDGIKKLQDPKLVQF 619
EM A DG+K P V F
Sbjct: 448 NEMSA------DGLK----PNTVGF 462
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 102/250 (40%), Gaps = 12/250 (4%)
Query: 113 SWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHH 172
++ + H +V FR G +V+ I G C+ D+ L D+
Sbjct: 468 AFCKEHRIPEAVEIFR----EMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE 523
Query: 173 SVL----VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXX 228
V+ +N LI F ++ A ++ G L + N L+K L
Sbjct: 524 GVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKA 583
Query: 229 XXXXXXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRG 284
++ G P+ + I+++ G + A E ++ G P +VT+ + I G
Sbjct: 584 RSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLING 643
Query: 285 LCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 344
LC G ++ + RKL + P ++ FN ++ C+ G V +A +L+E P+
Sbjct: 644 LCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPN 703
Query: 345 VYSYNMLLNA 354
++++LL +
Sbjct: 704 HRTWSILLQS 713
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 456 SYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTR 515
SYN ++ ++ + K+A + ML R + P + + ++ F
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCA------------VN 231
Query: 516 EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYT 575
E++ A +L ++M++ GC+PN Y LI K + ++ A QL +EM G PD T+
Sbjct: 232 EIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFN 291
Query: 576 VLIAWYHKHGRIGEKNKLFGEMKANCILLDD 606
+I K RI E K+ M DD
Sbjct: 292 DVILGLCKFDRINEAAKMVNRMLIRGFAPDD 322
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 122/522 (23%), Positives = 222/522 (42%), Gaps = 59/522 (11%)
Query: 104 KIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQF 163
++ R K+ + + G S F ++H + +G H + LL+ +V KC
Sbjct: 352 QLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMV---KCGH----- 403
Query: 164 STLLDLPHHSVLVFNVLIKVFASN------SMLEHAHQVFVSAKNVGLELHIRSCNFLLK 217
+P + +V+N+LI + +L+ A + + G+ L+ + + +
Sbjct: 404 -----MPGY--VVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTR 456
Query: 218 CLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNP 273
CL ++ G +P+ TY+ +++ + LA + ++ R G
Sbjct: 457 CLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVA 516
Query: 274 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL 333
V TY + C+ G ++ A K ++ N + A+IH + + V+ A E+
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 334 EEMKSSRTFPDVYSYNMLLNAFCKKG----------------DVXXXXXXXXXXXXCQIK 377
E M S P++ +Y+ L++ CK G DV +
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636
Query: 378 PSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFR 436
P++V Y +L+ CK+ +++ ++ ++M PN I+ + ++ C+ G+
Sbjct: 637 PNVVTYGALLDGFCKS-----HRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLD 691
Query: 437 EALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLI 496
EA + + E G Y+Y+ +I K +A +++ +ML+ + P VV Y+ +I
Sbjct: 692 EAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMI 751
Query: 497 SGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLAT 556
G K E A L Q M GC PN+ TYT +IDGF I I+
Sbjct: 752 DGLCKVGKTDE------------AYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCL 799
Query: 557 QLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
+L + M KG+ P+ VTY VLI K+G + + L EMK
Sbjct: 800 ELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 195/464 (42%), Gaps = 55/464 (11%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
V + +++ F ++E A + F + VG ++ + L+
Sbjct: 517 DVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELF 576
Query: 233 XXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRS----------------GGN 272
++ G LPNI TY+ ++ G + A +I ++ S
Sbjct: 577 ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSER 636
Query: 273 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 332
P VVTYG + G C+ V+ A KL+ + + N ++A+I G C+ G ++EA EV
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 333 LEEMKSSRTFP-DVYSYNMLLNAF--CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL- 388
EM S FP +Y+Y+ L++ + K+ D+ C P++V YT +I
Sbjct: 697 KTEM-SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA--PNVVIYTEMIDG 753
Query: 389 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 448
LCK G+ D++ ++ M + +PN + ++ G+ L LLE +
Sbjct: 754 LCK---VGKT--DEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Query: 449 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKE------ 502
G+ N +Y +I CK +A L+ M + + Y +I GF KE
Sbjct: 809 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLG 868
Query: 503 ---------QSNFEMVERLF------TREMNVACALFQEMSRIGCLPNLY--TYTCLIDG 545
+ F V RL + + +A L +E++ Y TY LI+
Sbjct: 869 LLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIES 928
Query: 546 FCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 589
C + ++ A QLF EM +KG+ P++ ++ LI ++ +I E
Sbjct: 929 LCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISE 972
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 159/382 (41%), Gaps = 57/382 (14%)
Query: 235 LMETGPLPNIHTYTIMMS--CGD--------IRLAAEILGKIYRSGGNPTVVTYGTYIRG 284
+++ G +P Y I++ CGD + LA + ++ +G + ++ R
Sbjct: 398 MVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRC 457
Query: 285 LCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 344
LC G + A ++R++ + ++ ++ V++ C + A + EEMK D
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517
Query: 345 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSL 404
VY+Y +++++FCK G + P++V YT+LI LK +++ +
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALI---HAYLKAKKV-SYAN 573
Query: 405 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLE------DFHEQGINLNQYSYN 458
E++ +ML PN + + ++ HC+ GQ +A + E D + + QY N
Sbjct: 574 ELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDN 633
Query: 459 EIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMN 518
+ P VV Y L+ GF K + +
Sbjct: 634 -------------------------SERPNVVTYGALLDGFCK------------SHRVE 656
Query: 519 VACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 578
A L MS GC PN Y LIDG CK+ +D A ++ EM G + TY+ LI
Sbjct: 657 EARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLI 716
Query: 579 AWYHKHGRIGEKNKLFGEMKAN 600
Y K R +K+ +M N
Sbjct: 717 DRYFKVKRQDLASKVLSKMLEN 738
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 157/373 (42%), Gaps = 36/373 (9%)
Query: 254 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 313
G +A E LG++ P+ TY I+ + +D A + R++ ++
Sbjct: 214 GSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTL 273
Query: 314 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 373
+ C+ G EAL ++E + PD Y L++ C+
Sbjct: 274 RCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRA 330
Query: 374 CQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREG 433
P++V Y++L+ C NK +QL + V N M+ P+ I N ++ +C G
Sbjct: 331 TSCLPNVVTYSTLLCGCLNK---KQL-GRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSG 386
Query: 434 QFREALTLLEDFHEQGINLNQYSYNEIIHMIC--KESYPKMALELMPRMLKRNVLPGVVN 491
A LL+ + G YN +I IC K+S L+L + + GVV
Sbjct: 387 DHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVL 446
Query: 492 YSTLISGF-------AKEQSNFEMVERLFTR--------------------EMNVACALF 524
+S F K + F ++ + + +M +A LF
Sbjct: 447 NKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLF 506
Query: 525 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 584
+EM R G + ++YTYT ++D FCK I+ A + F+EM+ G P+VVTYT LI Y K
Sbjct: 507 EEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKA 566
Query: 585 GRIGEKNKLFGEM 597
++ N+LF M
Sbjct: 567 KKVSYANELFETM 579
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/350 (23%), Positives = 148/350 (42%), Gaps = 16/350 (4%)
Query: 157 DDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLL 216
D F+Q+ + P+ V+ + L+ F + +E A ++ + G E + + L+
Sbjct: 624 DMYFKQYDDNSERPN--VVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALI 681
Query: 217 KCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGN 272
L + E G ++TY+ ++ LA+++L K+ +
Sbjct: 682 DGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCA 741
Query: 273 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 332
P VV Y I GLC+ G D A+KL++ + K N + A+I GF G + LE+
Sbjct: 742 PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLEL 801
Query: 333 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 392
LE M S P+ +Y +L++ CK G + Y +I
Sbjct: 802 LERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVI----- 856
Query: 393 KLKG-QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 451
+G + + +SL + + + Q+ P + ++ + + AL LLE+
Sbjct: 857 --EGFNKEFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSAT 914
Query: 452 LNQYS--YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 499
L YS YN +I +C + + A +L M K+ V+P + ++ +LI G
Sbjct: 915 LVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGL 964
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 122/326 (37%), Gaps = 44/326 (13%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
N ++ C+ G+ + ALE L +K R P +YN L+ AF K +
Sbjct: 203 LNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMS 262
Query: 373 XCQIK--------------------------------PSIVNYTSLIL-LCKNKLKGQQL 399
++ P V YT LI LC+ L
Sbjct: 263 LANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVPDTVFYTKLISGLCE-----ASL 317
Query: 400 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 459
++++++ N M + PN + + +L + Q +L +G + +N
Sbjct: 318 FEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNS 377
Query: 460 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNV 519
++H C A +L+ +M+K +PG V Y+ LI ++ + L +++
Sbjct: 378 LVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDK------DSLNCDLLDL 431
Query: 520 ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 579
A + EM G + N + C + A + EM +G PD TY+ ++
Sbjct: 432 AEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLN 491
Query: 580 WYHKHGRIGEKNKLFGEMKANCILLD 605
+ ++ LF EMK ++ D
Sbjct: 492 YLCNASKMELAFLLFEEMKRGGLVAD 517
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/466 (22%), Positives = 210/466 (45%), Gaps = 27/466 (5%)
Query: 146 LLRDIVGYCKCDDSFEQFSTLLDL-PHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVG 204
+LR+ + + K DDS + F ++ P S+ F+ L+ + + ++ + +G
Sbjct: 52 MLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG 111
Query: 205 LELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--AA 260
+ ++ +CN LL C +++ G P+I T+ +++ C R+ A
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDAL 171
Query: 261 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 320
+ ++ G P VV Y T I GLC+ VD A L+ ++ + +N++I G
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231
Query: 321 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 380
C G ++A ++ M +PDV+++N L++A K+G V + P I
Sbjct: 232 CSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDI 291
Query: 381 VNYTSLILLCKNKLKGQQLY---DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFRE 437
V Y+ LI G +Y D++ E++ M+ P+ + + ++ +C+ +
Sbjct: 292 VTYSLLIY-------GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEH 344
Query: 438 ALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 497
+ L + ++G+ N +Y +I C+ +A E+ RM+ V P ++ Y+ L+
Sbjct: 345 GMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLH 404
Query: 498 GFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 557
G ++ A + +M + G ++ TY +I G CK + A
Sbjct: 405 GLCDNG------------KIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWD 452
Query: 558 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 603
++ + +G+ PD+ TYT ++ +K G E + LF +MK + IL
Sbjct: 453 IYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 101/415 (24%), Positives = 171/415 (41%), Gaps = 57/415 (13%)
Query: 160 FEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCL 219
+EQ +L +PH+ + N+L+ F S L A +G E I + LL
Sbjct: 104 WEQMQ-MLGIPHN-LCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGF 161
Query: 220 XXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTV 275
++ G PN+ Y ++ C ++ A ++L ++ + G P V
Sbjct: 162 CRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDV 221
Query: 276 VTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEE 335
VTY + I GLC G A ++V + + + FNA+I + G V+EA E EE
Sbjct: 222 VTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE 281
Query: 336 M-----------------------------------KSSRTFPDVYSYNMLLNAFCKKGD 360
M S FPDV +Y++L+N +CK
Sbjct: 282 MIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKK 341
Query: 361 VXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTI 420
V + + V YT LI + + +L + + E++ M+ + PN I
Sbjct: 342 VEHGMKLFCEMSQRGVVRNTVTYTILI---QGYCRAGKL-NVAEEIFRRMVFCGVHPNII 397
Query: 421 ICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRM 480
N +L C G+ +AL +L D + G++ + +YN II +CK A ++ +
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457
Query: 481 LKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPN 535
+ ++P + Y+T++ G K+ RE + ALF++M G LPN
Sbjct: 458 NCQGLMPDIWTYTTMMLGLYKKG---------LRREAD---ALFRKMKEDGILPN 500
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/429 (26%), Positives = 192/429 (44%), Gaps = 69/429 (16%)
Query: 243 NIHTYTIMMS--C--GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 298
N++TY+I ++ C + LA ILGK+ + G P++VT + + G C + A LV
Sbjct: 109 NLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 299 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
++ + ++ F ++HG Q +EA+ ++E M PD+ +Y ++N CK+
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228
Query: 359 GDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 417
G+ +I+ +V Y ++I LCK K D + +++N M I+P
Sbjct: 229 GEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKH-----MDDAFDLFNKMETKGIKP 283
Query: 418 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
+ N ++ C G++ +A LL D E+ IN + +N +I KE A +L
Sbjct: 284 DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLY 343
Query: 478 PRMLK-RNVLPGVVNYSTLISGFAK------------EQSNFEMVERLFT---------- 514
M+K ++ P VV Y+TLI GF K E S +V T
Sbjct: 344 DEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQ 403
Query: 515 -REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR--------- 564
R+ + A +F++M G P++ TY L+DG C ++ A +F+ M++
Sbjct: 404 ARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVT 463
Query: 565 --------------------------KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
KG+ P+VVTYT +++ + + G E + LF EMK
Sbjct: 464 YTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK 523
Query: 599 ANCILLDDG 607
+ L + G
Sbjct: 524 EDGPLPNSG 532
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 117/509 (22%), Positives = 206/509 (40%), Gaps = 48/509 (9%)
Query: 105 IAREKKF------GSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDI--VGYCKC 156
IA+ KF G ++ G SH++ + I I+ F A+L + +GY
Sbjct: 85 IAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGY--- 141
Query: 157 DDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLL 216
S++ N L+ F + + A + +G + + L+
Sbjct: 142 --------------GPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLV 187
Query: 217 KCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGN 272
L ++ G P++ TY +++ G+ LA +L K+ +
Sbjct: 188 HGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIE 247
Query: 273 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 332
VV Y T I GLC+ ++D A L K+ K + +N +I C G ++A +
Sbjct: 248 ADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRL 307
Query: 333 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ-IKPSIVNYTSLIL-LC 390
L +M PD+ +N L++AF K+G + + P +V Y +LI C
Sbjct: 308 LSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFC 367
Query: 391 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 450
K K ++ +EV+ M Q + NT+ ++ + A + + G+
Sbjct: 368 KYK-----RVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 422
Query: 451 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 510
+ + +YN ++ +C + AL + M KR++ +V Y+T+I K
Sbjct: 423 HPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCK--------- 473
Query: 511 RLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPD 570
++ LF +S G PN+ TYT ++ GFC+ + A LF EMK G P+
Sbjct: 474 ---AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPN 530
Query: 571 VVTYTVLIAWYHKHGRIGEKNKLFGEMKA 599
TY LI + G +L EM++
Sbjct: 531 SGTYNTLIRARLRDGDEAASAELIKEMRS 559
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/341 (19%), Positives = 141/341 (41%), Gaps = 36/341 (10%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
V+++N +I ++ A +F + G++ + + N L+ CL
Sbjct: 249 DVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLL 308
Query: 233 XXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGG-NPTVVTYGTYIRGLCE 287
++E P++ + ++ G + A ++ ++ +S P VV Y T I+G C+
Sbjct: 309 SDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCK 368
Query: 288 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 347
V+ ++ R++ + N+ + +IHGF Q + A V ++M S PD+ +
Sbjct: 369 YKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMT 428
Query: 348 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--------------LLCKNK 393
YN+LL+ C G+V +K IV YT++I L C
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS 488
Query: 394 LKG-----------------QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFR 436
LKG + L +++ ++ M ++ PN+ N ++R R+G
Sbjct: 489 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEA 548
Query: 437 EALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
+ L+++ G + ++ + +M+ K L+++
Sbjct: 549 ASAELIKEMRSCGFAGDASTFGLVTNMLHDGRLDKSFLDML 589
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 142 bits (358), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 120/465 (25%), Positives = 199/465 (42%), Gaps = 30/465 (6%)
Query: 150 IVGYCKCDDSFEQFSTL----LDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGL 205
I GYCK + + F D S++ FN L+K M+E A V K++G
Sbjct: 256 IDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGF 315
Query: 206 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAE 261
+ + L +++G N +T +I+++ G I A E
Sbjct: 316 VPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEE 375
Query: 262 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 321
ILG+ G P V Y T I G C G + A + + + + +N +I FC
Sbjct: 376 ILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFC 435
Query: 322 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 381
+ G + A + + +MK P V +YN+L+ + +K + P++V
Sbjct: 436 ELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVV 495
Query: 382 NYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 440
+Y +LI LCK G +L + + V M + P I N ++ C +G+ +A
Sbjct: 496 SYGTLINCLCK----GSKLLEAQI-VKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFR 550
Query: 441 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 500
++ ++GI LN +YN +I + A +L+ + ++ + P V Y++LISG+
Sbjct: 551 FSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYG 610
Query: 501 KEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 560
F + AL++EM R G P L TY LI C + I+L +LF
Sbjct: 611 ------------FAGNVQRCIALYEEMKRSGIKPTLKTYHLLI-SLCTKEGIELTERLFG 657
Query: 561 EMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
EM K PD++ Y ++ Y HG + + L +M I LD
Sbjct: 658 EMSLK---PDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLD 699
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 173/423 (40%), Gaps = 66/423 (15%)
Query: 242 PNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 297
P++ Y +++ C R+ A ++ ++ P+++TY T I G C+ G + + K+
Sbjct: 212 PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKV 271
Query: 298 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 357
++ + FN ++ G + G V +A VL+EMK PD +++++L + +
Sbjct: 272 RERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSS 331
Query: 358 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 417
+K + YT ILL N L + +K+ E+ + + P
Sbjct: 332 NEKAEAALGVYETAVDSGVK--MNAYTCSILL--NALCKEGKIEKAEEILGREMAKGLVP 387
Query: 418 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK--------ESY 469
N +I N ++ +CR+G A +E +QG+ + +YN +I C+ +
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEV 447
Query: 470 PKMAL---------------------------ELMPRMLKRNVLPGVVNYSTLISGFAKE 502
KM L +++ M +P VV+Y TLI+ K
Sbjct: 448 NKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKG 507
Query: 503 QSNFE-------MVERLFTREMNV----------------ACALFQEMSRIGCLPNLYTY 539
E M +R + ++ + A +EM + G NL TY
Sbjct: 508 SKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTY 567
Query: 540 TCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 599
LIDG + A L E+ RKG+ PDV TY LI+ Y G + L+ EMK
Sbjct: 568 NTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKR 627
Query: 600 NCI 602
+ I
Sbjct: 628 SGI 630
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/487 (21%), Positives = 193/487 (39%), Gaps = 66/487 (13%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
F++L ++SN E A V+ +A + G++++ +C+ LL L
Sbjct: 318 DAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEIL 377
Query: 233 XXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
M G +PN Y M+ GD+ A + + + G P + Y IR CE
Sbjct: 378 GREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCEL 437
Query: 289 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 348
G ++ A K V K+ K + +N +I G+ ++ ++ ++L+EM+ + T P+V SY
Sbjct: 438 GEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSY 497
Query: 349 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLK-------GQQLYD 401
L+N CK + + P + Y LI C +K K +++
Sbjct: 498 GTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLK 557
Query: 402 KSLEV----YNSML--------------------QNAIRPNTIICNHILRVHCREGQFRE 437
K +E+ YN+++ + ++P+ N ++ + G +
Sbjct: 558 KGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQR 617
Query: 438 ALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL-PGVVNYSTLI 496
+ L E+ GI +Y+ +I + KE +EL R+ L P ++ Y+ ++
Sbjct: 618 CIALYEEMKRSGIKPTLKTYHLLISLCTKE-----GIELTERLFGEMSLKPDLLVYNGVL 672
Query: 497 S-----------------------GFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCL 533
G K N ++ +L ++ +L EM+
Sbjct: 673 HCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREME 732
Query: 534 PNLYTYTCLIDGFCKI-DYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNK 592
P TY ++ G C++ DY+ A + EM+ KG DV L++ + R E
Sbjct: 733 PEADTYNIIVKGHCEVKDYMS-AYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEI 791
Query: 593 LFGEMKA 599
+ EM
Sbjct: 792 VISEMNG 798
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 94/209 (44%), Gaps = 20/209 (9%)
Query: 394 LKGQQLYDKSLEVYNSMLQNAIRPN----TIICNHILRVHCREGQFREALTLLEDFHEQG 449
L ++ ++ +++ ++ I P+ T++ +H+++ QFR + + + E
Sbjct: 119 LNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTK----QFRVTINVFLNILESD 174
Query: 450 INLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV 509
+++ Y + I K S LEL RM + P V Y+ LI G K
Sbjct: 175 FRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCK-------- 226
Query: 510 ERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFP 569
+ MN A LF EM LP+L TY LIDG+CK + + ++ + MK I P
Sbjct: 227 ----GKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEP 282
Query: 570 DVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
++T+ L+ K G + + + EMK
Sbjct: 283 SLITFNTLLKGLFKAGMVEDAENVLKEMK 311
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 123/280 (43%), Gaps = 20/280 (7%)
Query: 326 VNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTS 385
++EA ++ +++ +P S +LL+ K +PS Y
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184
Query: 386 LILLCKNKLKGQQLYD--KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLE 443
I +L D K LE++N M + I P+ I N ++ C+ + +A L +
Sbjct: 185 AIQ------AAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFD 238
Query: 444 DFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ 503
+ + + + +YN +I CK P+ + ++ RM ++ P ++ ++TL+ G K
Sbjct: 239 EMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAG 298
Query: 504 SNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 563
MVE A + +EM +G +P+ +T++ L DG+ + + A +++
Sbjct: 299 ----MVED--------AENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAV 346
Query: 564 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 603
G+ + T ++L+ K G+I + ++ G A ++
Sbjct: 347 DSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLV 386
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/474 (24%), Positives = 204/474 (43%), Gaps = 36/474 (7%)
Query: 161 EQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLX 220
EQ TL H + +++ I F S L A V +G E I + + LL
Sbjct: 107 EQMQTLG--ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYC 164
Query: 221 XXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVV 276
++E G P+ T+T ++ A ++ ++ + G P +V
Sbjct: 165 HSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLV 224
Query: 277 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 336
TYGT + GLC+ G +D+A L+ K+ N FN +I C+ V A+++ EM
Sbjct: 225 TYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM 284
Query: 337 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 396
++ P+V +YN L+N C G +I P++V + +LI K
Sbjct: 285 ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI---DAFFKE 341
Query: 397 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 456
+L + +++ M+Q +I P+TI N ++ C + EA + + + N +
Sbjct: 342 GKLVEAE-KLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQT 400
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF--AKEQSNFEMVERLFT 514
YN +I+ CK + +EL M +R ++ V Y+T+I GF A + + +MV +
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 515 R---------------------EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 553
+++ A +F+ + + N++ Y +I+G CK +
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG 520
Query: 554 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDG 607
A LF + K PDVVTY +I+ + E + LF +MK + L + G
Sbjct: 521 EAWDLFCSLSIK---PDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSG 571
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 127/285 (44%), Gaps = 16/285 (5%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
FN ++ + + + E+M++ D+Y+Y++ +N FC++ +
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 373 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 432
+P IV +SL+ N + ++ + + M++ +P+T ++
Sbjct: 146 KLGYEPDIVTLSSLL----NGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 433 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 492
+ EA+ L++ ++G + +Y +++ +CK +AL L+ +M + VV +
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIF 261
Query: 493 STLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 552
+T+I K R + VA LF EM G PN+ TY LI+ C
Sbjct: 262 NTIIDSLCK------------YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRW 309
Query: 553 DLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
A++L M K I P+VVT+ LI + K G++ E KL EM
Sbjct: 310 SDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEM 354
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 126/287 (43%), Gaps = 68/287 (23%)
Query: 391 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 450
+N+L D +++++ M+++ P+ + N +L + +F ++L E GI
Sbjct: 55 RNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGI 114
Query: 451 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF--AKEQSNF-- 506
+ + Y+Y+ I+ C+ S +AL ++ +M+K P +V S+L++G+ +K S+
Sbjct: 115 SHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVA 174
Query: 507 ---EMVE-----RLFT-----------REMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 547
+MVE FT + + A AL +M + GC P+L TY +++G C
Sbjct: 175 LVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 548 KIDYIDL-----------------------------------ATQLFDEMKRKGIFPDVV 572
K IDL A LF EM+ KGI P+VV
Sbjct: 235 KRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVV 294
Query: 573 TYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKLQDPKLVQF 619
TY LI +GR + ++L M ++K +P +V F
Sbjct: 295 TYNSLINCLCNYGRWSDASRLLSNM----------LEKKINPNVVTF 331
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 136/340 (40%), Gaps = 32/340 (9%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
+V++FN +I +E A +F + G+ ++ + N L+ CL
Sbjct: 257 NVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLL 316
Query: 233 XXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
++E PN+ T+ ++ G + A ++ ++ + +P +TY I G C
Sbjct: 317 SNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMH 376
Query: 289 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 348
+D A ++ + + K N +N +I+GFC+ V + +E+ EM + +Y
Sbjct: 377 NRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTY 436
Query: 349 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLE- 405
++ F + GD ++ I+ Y+ L+ L KL + K L+
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK 496
Query: 406 --------VYNSMLQN-----------------AIRPNTIICNHILRVHCREGQFREALT 440
+YN+M++ +I+P+ + N ++ C + +EA
Sbjct: 497 SEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADD 556
Query: 441 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRM 480
L E G N +YN +I ++ + EL+ M
Sbjct: 557 LFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEM 596
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 92/221 (41%), Gaps = 15/221 (6%)
Query: 150 IVGYC---KCDDSFEQFSTLLD---LPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNV 203
I G+C + D++ + F ++ LP+ + +N LI F +E ++F
Sbjct: 370 INGFCMHNRLDEAKQMFKFMVSKDCLPN--IQTYNTLINGFCKCKRVEDGVELFREMSQR 427
Query: 204 GLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLA 259
GL + + +++ ++ +I TY+I++ S G + A
Sbjct: 428 GLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTA 487
Query: 260 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHG 319
I + +S + Y T I G+C+ G V A L L K + +N +I G
Sbjct: 488 LVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVT---YNTMISG 544
Query: 320 FCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGD 360
C + + EA ++ +MK T P+ +YN L+ A + D
Sbjct: 545 LCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCD 585
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 202/456 (44%), Gaps = 25/456 (5%)
Query: 172 HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXX 231
H++ +N+LI F S + A + +G E I + + LL
Sbjct: 43 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 102
Query: 232 XXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE 287
++E G P+ T+T ++ A ++ ++ + G P +VTYG + GLC+
Sbjct: 103 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 162
Query: 288 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 347
G +D+A L+ K+ + FN +I C+ V++AL + +EM++ P+V +
Sbjct: 163 RGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVT 222
Query: 348 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVY 407
Y+ L++ C G +I P++V + +LI + + + ++ +++
Sbjct: 223 YSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI----DAFVKEGKFVEAEKLH 278
Query: 408 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 467
+ M++ +I P+ N ++ C + +A + E + + +YN +I CK
Sbjct: 279 DDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKS 338
Query: 468 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEM 527
+ EL M R ++ V Y+TLI G + + + A +F++M
Sbjct: 339 KRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG------------DCDNAQKVFKQM 386
Query: 528 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 587
G P++ TY+ L+DG C ++ A ++FD M++ I D+ YT +I K G++
Sbjct: 387 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 446
Query: 588 GEKNKLFGEM-----KANCILLDDGIKKLQDPKLVQ 618
+ LF + K N + + I L +L+Q
Sbjct: 447 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 482
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 144/339 (42%), Gaps = 54/339 (15%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
FN ++ + + + + E+M+ ++Y+YN+L+N FC++ +
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 373 XCQIKPSIVNYTSLI-LLCKNK---------------------------LKGQQLYDKSL 404
+PSIV +SL+ C K + G L++K+
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKAS 132
Query: 405 E---VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEII 461
E + + M+Q +PN + ++ C+ G A LL I + +N II
Sbjct: 133 EAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTII 192
Query: 462 HMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS-----GFAKEQSNF--EMVER--- 511
+CK + AL L M + + P VV YS+LIS G + S +M+E+
Sbjct: 193 DSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 512 -----------LFTREMNVACA--LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQL 558
F +E A L +M + P+++TY LI+GFC D +D A Q+
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 559 FDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
F+ M K FPD+ TY LI + K R+ + +LF EM
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREM 351
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 117/268 (43%), Gaps = 68/268 (25%)
Query: 410 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 469
M+++ P+ N +L + +F ++L E GI+ N Y+YN +I+ C+ S
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 470 PKMALELMPRMLKRNVLPGVVNYSTLISGF--AKEQSNF-----EMVER-------LFT- 514
+AL L+ +M+K P +V S+L++G+ K S+ +MVE FT
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 515 --------REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDL------------ 554
+ + A AL M + GC PNL TY +++G CK IDL
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180
Query: 555 -----------------------ATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKN 591
A LF EM+ KGI P+VVTY+ LI+ +GR + +
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240
Query: 592 KLFGEMKANCILLDDGIKKLQDPKLVQF 619
+L +M I+K +P LV F
Sbjct: 241 QLLSDM----------IEKKINPNLVTF 258
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 95/233 (40%), Gaps = 9/233 (3%)
Query: 176 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 235
+N LIK F + +E ++F + GL + L++ L +
Sbjct: 327 TYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQM 386
Query: 236 METGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 291
+ G P+I TY+I++ G + A E+ + +S + Y T I G+C+ G V
Sbjct: 387 VSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKV 446
Query: 292 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 351
D L L K N +N +I G C + + EA +L++MK PD +YN L
Sbjct: 447 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTL 506
Query: 352 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSL 404
+ A + GD C+ V S I L N L +L DKS
Sbjct: 507 IRAHLRDGDKAASAELIREMRSCR----FVGDASTIGLVANMLHDGRL-DKSF 554
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 172/368 (46%), Gaps = 32/368 (8%)
Query: 242 PNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 297
P++ Y +++ C R+ A +L ++ +P VTY I LC G +D+A K+
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 298 VRKLHCKLHPLNSHC------FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 351
+ +L L+ +C + +I G V+EAL++++EM S PD+++YN +
Sbjct: 216 LNQL------LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTI 269
Query: 352 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML 411
+ CK+G V +P +++Y L+ L Q +++ ++ M
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILL----RALLNQGKWEEGEKLMTKMF 325
Query: 412 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 471
PN + + ++ CR+G+ EA+ LL+ E+G+ + YSY+ +I C+E
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 472 MALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIG 531
+A+E + M+ LP +VNY+T+++ K + +E +F ++ +G
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE------------IFGKLGEVG 433
Query: 532 CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKN 591
C PN +Y + A + EM GI PD +TY +I+ + G + E
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAF 493
Query: 592 KLFGEMKA 599
+L +M++
Sbjct: 494 ELLVDMRS 501
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 114/492 (23%), Positives = 204/492 (41%), Gaps = 41/492 (8%)
Query: 130 IIHTFAMAGMHLEVFALLRDIV--GYCK----CDDSFEQFSTLLDLP------------- 170
I H +G ++E LL +V GY C + F TL ++P
Sbjct: 95 IFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG 154
Query: 171 HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXX 230
V +N LI F + ++ A +V ++ + N ++ L
Sbjct: 155 QPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALK 214
Query: 231 XXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLC 286
L+ P + TYTI++ G + A +++ ++ G P + TY T IRG+C
Sbjct: 215 VLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMC 274
Query: 287 ECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 346
+ G VD A ++VR L K + +N ++ +G E +++ +M S + P+V
Sbjct: 275 KEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 347 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLE 405
+Y++L+ C+ G + + P +Y LI C+ + D ++E
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCR-----EGRLDVAIE 389
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
+M+ + P+ + N +L C+ G+ +AL + E G + N SYN + +
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALW 449
Query: 466 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQ 525
AL ++ M+ + P + Y+++IS +E MV+ F L
Sbjct: 450 SSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREG----MVDEAF--------ELLV 497
Query: 526 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
+M P++ TY ++ GFCK I+ A + + M G P+ TYTVLI G
Sbjct: 498 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557
Query: 586 RIGEKNKLFGEM 597
E +L ++
Sbjct: 558 YRAEAMELANDL 569
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 75/158 (47%), Gaps = 16/158 (10%)
Query: 446 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN 505
H Q + +I H C+ +L L+ M+++ P V+ + LI GF
Sbjct: 81 HSQSLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGF------ 134
Query: 506 FEMVERLFT-REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 564
FT R + A + + + + G P+++ Y LI+GFCK++ ID AT++ D M+
Sbjct: 135 -------FTLRNIPKAVRVMEILEKFG-QPDVFAYNALINGFCKMNRIDDATRVLDRMRS 186
Query: 565 KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE-MKANC 601
K PD VTY ++I G++ K+ + + NC
Sbjct: 187 KDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNC 224
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/496 (24%), Positives = 223/496 (44%), Gaps = 25/496 (5%)
Query: 118 HGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYC-KCDDSFEQ-FSTLLDLPHHSVL 175
GF HS F I+IH A + +LL+ ++ K D F FS S
Sbjct: 98 RGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKCKLSSSS 157
Query: 176 VFNVLIKVFASNSMLEHAHQVF-VSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 234
F++LI+ + + + VF + V L +R+ + LL L
Sbjct: 158 SFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFND 217
Query: 235 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
++ G P+++ YT ++ D+ A E++ + +G + +V Y I GLC+
Sbjct: 218 MVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQK 277
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
V A + + L K + + +++G C+ LE+++EM R P + +
Sbjct: 278 VWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSS 337
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNS 409
L+ K+G + + P++ Y +LI LCK G++ ++ L +++
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCK----GRKFHEAEL-LFDR 392
Query: 410 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 469
M + +RPN + + ++ + CR G+ AL+ L + + G+ L+ Y YN +I+ CK
Sbjct: 393 MGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGD 452
Query: 470 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSR 529
A M M+ + + P VV Y++L+ G+ + ++N A L+ EM+
Sbjct: 453 ISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKG------------KINKALRLYHEMTG 500
Query: 530 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 589
G P++YT+T L+ G + I A +LF+EM + P+ VTY V+I Y + G + +
Sbjct: 501 KGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSK 560
Query: 590 KNKLFGEMKANCILLD 605
+ EM I+ D
Sbjct: 561 AFEFLKEMTEKGIVPD 576
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 122/470 (25%), Positives = 193/470 (41%), Gaps = 26/470 (5%)
Query: 137 AGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHH----SVLVFNVLIKVFASNSMLEH 192
G+ L V+ I G+CK D + ++ + +V+ + L+ + S +
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490
Query: 193 AHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS 252
A +++ G+ I + LL L + E PN TY +M+
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Query: 253 C----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPL 308
GD+ A E L ++ G P +Y I GLC G A V LH L
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCEL 610
Query: 309 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 368
N C+ ++HGFC+ G + EAL V +EM D+ Y +L++ K D
Sbjct: 611 NEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL 670
Query: 369 XXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRV 428
+KP V YTS+I K+K + ++ +++ M+ PN + ++
Sbjct: 671 KEMHDRGLKPDDVIYTSMI-DAKSKTGD---FKEAFGIWDLMINEGCVPNEVTYTAVING 726
Query: 429 HCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK-ESYPKMALELMPRMLKRNVLP 487
C+ G EA L NQ +Y + ++ K E + A+EL +LK +L
Sbjct: 727 LCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILK-GLLA 785
Query: 488 GVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 547
Y+ LI GF + Q E L TR M G P+ TYT +I+ C
Sbjct: 786 NTATYNMLIRGFCR-QGRIEEASELITR-----------MIGDGVSPDCITYTTMINELC 833
Query: 548 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
+ + + A +L++ M KGI PD V Y LI G +G+ +L EM
Sbjct: 834 RRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM 883
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/366 (26%), Positives = 162/366 (44%), Gaps = 24/366 (6%)
Query: 239 GPLPNIHTYTIM--MSC--GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
G PN TY+I+ M C G + A LG++ +G +V Y + I G C+ G + A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456
Query: 295 HKLVRKL-HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLN 353
+ ++ + KL P + +++ G+C +G +N+AL + EM P +Y++ LL+
Sbjct: 457 EGFMAEMINKKLEP-TVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLS 515
Query: 354 AFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQ 412
+ G + +KP+ V Y +I C+ + K+ E M +
Sbjct: 516 GLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCE-----EGDMSKAFEFLKEMTE 570
Query: 413 NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 472
I P+T ++ C GQ EA ++ H+ LN+ Y ++H C+E +
Sbjct: 571 KGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEE 630
Query: 473 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGC 532
AL + M++R V +V Y LI G K + +LF L +EM G
Sbjct: 631 ALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKD-----RKLFF-------GLLKEMHDRGL 678
Query: 533 LPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNK 592
P+ YT +ID K A ++D M +G P+ VTYT +I K G + E
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEV 738
Query: 593 LFGEMK 598
L +M+
Sbjct: 739 LCSKMQ 744
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 166/383 (43%), Gaps = 51/383 (13%)
Query: 273 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 332
P VVTY T + GLC+ ++ +++ ++ C + ++++ G +RG + EAL +
Sbjct: 295 PDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNL 354
Query: 333 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCK 391
++ + P+++ YN L+++ CK ++P+ V Y+ LI + C+
Sbjct: 355 VKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCR 414
Query: 392 -NKLKGQ-----QLYDKSLEV----YNS--------------------MLQNAIRPNTII 421
KL ++ D L++ YNS M+ + P +
Sbjct: 415 RGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVT 474
Query: 422 CNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRML 481
++ +C +G+ +AL L + +GI + Y++ ++ + + + A++L M
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 534
Query: 482 KRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTC 541
+ NV P V Y+ +I G+ +E +M+ A +EM+ G +P+ Y+Y
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEG------------DMSKAFEFLKEMTEKGIVPDTYSYRP 582
Query: 542 LIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANC 601
LI G C A D + + + + YT L+ + + G++ E + EM
Sbjct: 583 LIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRG 642
Query: 602 ILLD--------DGIKKLQDPKL 616
+ LD DG K +D KL
Sbjct: 643 VDLDLVCYGVLIDGSLKHKDRKL 665
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 112/506 (22%), Positives = 213/506 (42%), Gaps = 57/506 (11%)
Query: 150 IVGYCK---CDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGL 205
I G+CK D +F+ F + ++ ++ LI + ML H++F A + G+
Sbjct: 293 INGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV 352
Query: 206 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--AAE 261
+L + + + ++ G PN+ TYTI++ C D R+ A
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFG 412
Query: 262 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 321
+ G+I + G P++VTY + I G C+CG + L + +P + + ++ G
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS 472
Query: 322 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 381
++G + A+ +M +V +N L++ +C+ IKP +
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 382 NYTSLI-------LLCK--NKLKGQQLYD----------------------------KSL 404
+T+++ CK G QL+D +
Sbjct: 533 TFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS 592
Query: 405 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
+ +N++++ + P+ + N ++ +C + EA + E N + +IH++
Sbjct: 593 KFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 652
Query: 465 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALF 524
CK + A+ + M ++ P V Y L+ F+K + ++ + LF
Sbjct: 653 CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSK------------SVDIEGSFKLF 700
Query: 525 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 584
+EM G P++ +Y+ +IDG CK +D AT +F + + PDVV Y +LI Y K
Sbjct: 701 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 760
Query: 585 GRIGEKNKLFGEMKANCILLDDGIKK 610
GR+ E L+ M N + DD +++
Sbjct: 761 GRLVEAALLYEHMLRNGVKPDDLLQR 786
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 108/478 (22%), Positives = 202/478 (42%), Gaps = 57/478 (11%)
Query: 177 FNVLIKVFASNSMLEHAHQVFVSA-KNVGLELHI------RS-----CNFLLKCLXXXXX 224
F + V N M + A +VF N G + ++ RS C FL++C
Sbjct: 102 FYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYGM 161
Query: 225 XXXXXXXXXXLMETGP-LPNIHTYTIMMS---CGDIRLAAEILGKIYRSGGNPTVVTYGT 280
+ G +P Y ++ S + L A+ K+ R G P+ V+
Sbjct: 162 VDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHG 221
Query: 281 YIRGLCEC-GYVDVA---HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 336
++ C G V A H+LV + ++ ++ N V+ G + A +L +
Sbjct: 222 FVLDALFCKGEVTKALDFHRLVMERGFRVGIVSC---NKVLKGL-SVDQIEVASRLLSLV 277
Query: 337 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 396
P+V ++ L+N FCK+G++ I+P ++ Y++LI K
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI---DGYFKA 334
Query: 397 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 456
L ++++ L ++ + ++ + + V+ + G A + + QGI+ N +
Sbjct: 335 GML-GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVT 393
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK---EQSNF----EMV 509
Y +I +C++ A + ++LKR + P +V YS+LI GF K +S F +M+
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 510 ERLFTREMNVACALFQEMSRIGCL----------------PNLYTYTCLIDGFCKIDYID 553
+ + ++ + L +S+ G + N+ + LIDG+C+++ D
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 554 LATQLFDEMKRKGIFPDVVTYTVLI------AWYHKHGRIGEKNKLFGEMKANCILLD 605
A ++F M GI PDV T+T ++ + KH + +LF M+ N I D
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISAD 571
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 154/367 (41%), Gaps = 49/367 (13%)
Query: 269 SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCK-------LHPLNSHCFNAVIHGF- 320
SG +P+ T L G DVA K+ ++ L + +A + F
Sbjct: 96 SGKDPSFYTIAHV---LIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFL 152
Query: 321 ----CQRGAVNEALEV-LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ 375
C+ G V++ALE+ + + P Y ML N+ V
Sbjct: 153 MECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRML-NSLIGSDRVDLIADHFDKLCRGG 211
Query: 376 IKPSIVNYTSLIL---LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 432
I+PS V+ +L CK ++ K+L+ + +++ R + CN +L+ +
Sbjct: 212 IEPSGVSAHGFVLDALFCKGEVT------KALDFHRLVMERGFRVGIVSCNKVLKGLSVD 265
Query: 433 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 492
Q A LL + G N ++ +I+ CK A +L M +R + P ++ Y
Sbjct: 266 -QIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAY 324
Query: 493 STLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 552
STLI G+ K M +LF++ ++ L ++ ++ ID + K +
Sbjct: 325 STLIDGYFK-AGMLGMGHKLFSQALHKGVKL-----------DVVVFSSTIDVYVKSGDL 372
Query: 553 DLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKLQ 612
A+ ++ M +GI P+VVTYT+LI + GRI E ++G++ +K+
Sbjct: 373 ATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI----------LKRGM 422
Query: 613 DPKLVQF 619
+P +V +
Sbjct: 423 EPSIVTY 429
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/469 (23%), Positives = 207/469 (44%), Gaps = 56/469 (11%)
Query: 170 PHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLX---XXXXXX 226
P S +F++ + + A Q+F + L+ ++ +CN LL L
Sbjct: 127 PPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIS 186
Query: 227 XXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRLAAEILGKIYRSGG----NPTVVTYGT 280
+++ G N+ T+ ++++ C + +L + LG + R NP VTY T
Sbjct: 187 SAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLE-DALGMLERMVSEFKVNPDNVTYNT 245
Query: 281 YIRGLCECGYV-DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSS 339
++ + + G + D+ L+ L P N +N +++G+C+ G++ EA +++E MK +
Sbjct: 246 ILKAMSKKGRLSDLKELLLDMKKNGLVP-NRVTYNNLVYGYCKLGSLKEAFQIVELMKQT 304
Query: 340 RTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLC--------- 390
PD+ +YN+L+N C G + +++P +V Y +LI C
Sbjct: 305 NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEA 364
Query: 391 --------KNKLKGQQLY----------DKSLEVYNSMLQNAI-----RPNTIICNHILR 427
+ +K Q+ ++ E ++ + P+ + + +++
Sbjct: 365 RKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIK 424
Query: 428 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 487
+ + G AL ++ + ++GI +N + N I+ +CKE A L+ KR +
Sbjct: 425 AYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIV 484
Query: 488 GVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 547
V Y TLI GF +E E VE+ A ++ EM ++ P + T+ LI G C
Sbjct: 485 DEVTYGTLIMGFFRE----EKVEK--------ALEMWDEMKKVKITPTVSTFNSLIGGLC 532
Query: 548 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE 596
+LA + FDE+ G+ PD T+ +I Y K GR+ + + + E
Sbjct: 533 HHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNE 581
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 124/552 (22%), Positives = 221/552 (40%), Gaps = 76/552 (13%)
Query: 94 VVRVIKSLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGY 153
+VR S + ARE F V+ G S +V F ++++ + + G + +L +V
Sbjct: 176 LVRYPSSFSISSAREV-FDDMVKI-GVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSE 233
Query: 154 CKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCN 213
K + P + + +N ++K + L ++ + K GL + + N
Sbjct: 234 FKVN------------PDN--VTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYN 279
Query: 214 FLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRS 269
L+ + +T LP++ TY I+++ G +R E++ +
Sbjct: 280 NLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSL 339
Query: 270 GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQ---RGAV 326
P VVTY T I G E G A KL+ ++ N N + C+ R AV
Sbjct: 340 KLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAV 399
Query: 327 NEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSL 386
++ L +M PD+ +Y+ L+ A+ K GD+ IK + + ++
Sbjct: 400 TRKVKELVDMHGFS--PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTI 457
Query: 387 I-LLCKNKL-------------KG-----------------QQLYDKSLEVYNSMLQNAI 415
+ LCK + +G ++ +K+LE+++ M + I
Sbjct: 458 LDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKI 517
Query: 416 RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 475
P N ++ C G+ A+ ++ E G+ + ++N II CKE + A E
Sbjct: 518 TPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFE 577
Query: 476 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPN 535
+K + P + L++G KE M E + +N L +E +
Sbjct: 578 FYNESIKHSFKPDNYTCNILLNGLCKEG----MTE----KALNFFNTLIEERE-----VD 624
Query: 536 LYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL-- 593
TY +I FCK + A L EM+ KG+ PD TY I+ + G++ E ++L
Sbjct: 625 TVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLK 684
Query: 594 -----FGEMKAN 600
FG MK +
Sbjct: 685 KFSGKFGSMKRD 696
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 159/400 (39%), Gaps = 71/400 (17%)
Query: 239 GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE---CGYV 291
P P+ + I +S G +A +I K+ R P ++T T + GL +
Sbjct: 126 SPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSI 185
Query: 292 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSS-RTFPDVYSYNM 350
A ++ + LN FN +++G+C G + +AL +LE M S + PD +YN
Sbjct: 186 SSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNT 245
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
+L A KKG + + L+L M
Sbjct: 246 ILKAMSKKG-------------------RLSDLKELLL--------------------DM 266
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
+N + PN + N+++ +C+ G +EA ++E + + + +YN +I+ +C
Sbjct: 267 KKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSM 326
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISG------------FAKEQSNFEMVERLFTREMN 518
+ LELM M + P VV Y+TLI G ++ N + T ++
Sbjct: 327 REGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNIS 386
Query: 519 VACALFQEMSRI------------GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKG 566
+ +E G P++ TY LI + K+ + A ++ EM +KG
Sbjct: 387 LKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKG 446
Query: 567 IFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 606
I + +T ++ K ++ E + L ++D+
Sbjct: 447 IKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDE 486
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 120/277 (43%), Gaps = 32/277 (11%)
Query: 343 PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDK 402
P +++ L+A+ +G ++KP++ L C L G Y
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNL-------LTCNTLLIGLVRYPS 181
Query: 403 SL------EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF-HEQGINLNQY 455
S EV++ M++ + N N ++ +C EG+ +AL +LE E +N +
Sbjct: 182 SFSISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNV 241
Query: 456 SYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTR 515
+YN I+ + K+ EL+ M K ++P V Y+ L+ G+ K S
Sbjct: 242 TYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGS----------- 290
Query: 516 EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYT 575
+ A + + M + LP+L TY LI+G C + +L D MK + PDVVTY
Sbjct: 291 -LKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYN 349
Query: 576 VLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKLQ 612
LI + G E KL +M+ +DG+K Q
Sbjct: 350 TLIDGCFELGLSLEARKLMEQME------NDGVKANQ 380
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 188/426 (44%), Gaps = 32/426 (7%)
Query: 162 QFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXX 221
+ L LP + + +N+++K F +LE A +F S + ++S N L+ L
Sbjct: 279 ELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVR 338
Query: 222 XXXXXXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVT 277
+ + G P+I++Y I+M G + A I+G + R+G P VT
Sbjct: 339 HGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVT 398
Query: 278 YGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMK 337
YG + G C G VD A L++++ N++ N ++H + G ++EA E+L +M
Sbjct: 399 YGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMN 458
Query: 338 SSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQ 397
D + N++++ C G++ +K V+ ++ + N G
Sbjct: 459 EKGYGLDTVTCNIIVDGLCGSGELDKAIEI--------VKGMRVHGSAALGNLGNSYIGL 510
Query: 398 QLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSY 457
V +S+++N P+ I + +L C+ G+F EA L + + + + +Y
Sbjct: 511 --------VDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAY 562
Query: 458 NEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREM 517
N IH CK+ A ++ M K+ + Y++LI G + FE+
Sbjct: 563 NIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEI--------- 613
Query: 518 NVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 577
L EM G PN+ TY I C+ + ++ AT L DEM +K I P+V ++ L
Sbjct: 614 ---HGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYL 670
Query: 578 IAWYHK 583
I + K
Sbjct: 671 IEAFCK 676
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/372 (25%), Positives = 163/372 (43%), Gaps = 24/372 (6%)
Query: 242 PNIHTYTIMMSCGDIRLAAEILGKIYRS----GGNPTVVTYGTYIRGLCECGYVDVAHKL 297
P+++ Y +++ E + +Y+ G P T+ IR LC+ VD A +L
Sbjct: 110 PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAAREL 169
Query: 298 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 357
++ K N F ++ G+C+ G ++ LE+L M+S P+ YN ++++FC+
Sbjct: 170 FDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCR 229
Query: 358 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNK--LKGQQLY-DKSLEVYNSMLQN 413
+G + P IV + S I LCK L +++ D L+ Y +
Sbjct: 230 EGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGL--- 286
Query: 414 AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMA 473
RPN+I N +L+ C+ G +A TL E E + SYN + + + A
Sbjct: 287 -PRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEA 345
Query: 474 LELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCL 533
++ +M + + P + +Y+ L+ G K ++ A + M R G
Sbjct: 346 ETVLKQMTDKGIGPSIYSYNILMDGLCK------------LGMLSDAKTIVGLMKRNGVC 393
Query: 534 PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL 593
P+ TY CL+ G+C + +D A L EM R P+ T +L+ K GRI E +L
Sbjct: 394 PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEEL 453
Query: 594 FGEMKANCILLD 605
+M LD
Sbjct: 454 LRKMNEKGYGLD 465
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 174/417 (41%), Gaps = 58/417 (13%)
Query: 235 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKI----YRSGGNPTVVTYGTYIRGLC 286
+ E G +P+I T+ +S G + A+ I + Y P +TY ++G C
Sbjct: 243 MREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFC 302
Query: 287 ECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 346
+ G ++ A L + + +N + G + G EA VL++M P +Y
Sbjct: 303 KVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIY 362
Query: 347 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEV 406
SYN+L++ CK G + + P V Y L+ + D + +
Sbjct: 363 SYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLL----HGYCSVGKVDAAKSL 418
Query: 407 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 466
M++N PN CN +L + G+ EA LL +E+G L+ + N I+ +C
Sbjct: 419 LQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCG 478
Query: 467 ESYPKMALELMPRM-----------------------LKRNVLPGVVNYSTLISG----- 498
A+E++ M ++ N LP ++ YSTL++G
Sbjct: 479 SGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAG 538
Query: 499 -FAKEQSNFE--MVERL-------------FTREMNVACA--LFQEMSRIGCLPNLYTYT 540
FA+ ++ F M E+L F ++ ++ A + ++M + GC +L TY
Sbjct: 539 RFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598
Query: 541 CLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
LI G + I L DEMK KGI P++ TY I + + ++ + L EM
Sbjct: 599 SLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEM 655
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 187/443 (42%), Gaps = 25/443 (5%)
Query: 176 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 235
FN+LI+ +S ++ A ++F G + + + L++ +
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM 208
Query: 236 METGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 291
G LPN Y ++S G + +++ K+ G P +VT+ + I LC+ G V
Sbjct: 209 ESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKV 268
Query: 292 DVAHKLVRKL----HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 347
A ++ + + L NS +N ++ GFC+ G + +A + E ++ + + S
Sbjct: 269 LDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQS 328
Query: 348 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEV 406
YN+ L + G I PSI +Y L+ LCK + + +
Sbjct: 329 YNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCK-----LGMLSDAKTI 383
Query: 407 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 466
M +N + P+ + +L +C G+ A +LL++ N Y+ N ++H + K
Sbjct: 384 VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK 443
Query: 467 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQ- 525
A EL+ +M ++ V + ++ G + +E + ++ + AL
Sbjct: 444 MGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNL 503
Query: 526 EMSRIG----------CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYT 575
S IG CLP+L TY+ L++G CK A LF EM + + PD V Y
Sbjct: 504 GNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYN 563
Query: 576 VLIAWYHKHGRIGEKNKLFGEMK 598
+ I + K G+I ++ +M+
Sbjct: 564 IFIHHFCKQGKISSAFRVLKDME 586
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 121/299 (40%), Gaps = 51/299 (17%)
Query: 273 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHC-KLHPLNSHCFNAVIHGFCQRGAVNEALE 331
P ++TY T + GLC+ G A L ++ KL P +S +N IH FC++G ++ A
Sbjct: 522 PDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQP-DSVAYNIFIHHFCKQGKISSAFR 580
Query: 332 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNY-TSLILLC 390
VL++M+ + +YN L+ K + I P+I Y T++ LC
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640
Query: 391 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR------------------- 431
+G+++ D + + + M+Q I PN +++ C+
Sbjct: 641 ----EGEKVEDAT-NLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSICG 695
Query: 432 ---------------EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 476
GQ +A LLE ++G L + Y +++ +CK+ ++A +
Sbjct: 696 QKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGI 755
Query: 477 MPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPN 535
+ +M+ R +I G K + +E N EM+ +G + N
Sbjct: 756 LHKMIDRGYGFDPAALMPVIDGLGKMGNK---------KEANSFADKMMEMASVGEVAN 805
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 190/453 (41%), Gaps = 76/453 (16%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
++ FN+LIK F L + F +G + + + N LL L
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 233 XXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 292
++ETG L A + ++ G P V+T+ T I GLC G V
Sbjct: 200 GYMVETGFLE----------------AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVL 243
Query: 293 VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLL 352
A LV K+ K ++ + +++G C+ G AL +L +M+ + PDV Y+ ++
Sbjct: 244 EAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAII 303
Query: 353 NAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQ 412
+ CK G + + +++ ML+
Sbjct: 304 DRLCKDGH---------------------------------------HSDAQYLFSEMLE 324
Query: 413 NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 472
I PN N ++ C G++ +A LL D E+ IN + ++N +I KE
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 473 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLF------------------- 513
A +L ML R + P V Y+++I GF K + F+ + +F
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCK-HNRFDDAKHMFDLMASPDVVTFNTIIDVYC 443
Query: 514 -TREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
+ ++ L +E+SR G + N TY LI GFC++D ++ A LF EM G+ PD +
Sbjct: 444 RAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTI 503
Query: 573 TYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
T +L+ + ++ ++ E +LF ++ + I LD
Sbjct: 504 TCNILLYGFCENEKLEEALELFEVIQMSKIDLD 536
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 149/314 (47%), Gaps = 36/314 (11%)
Query: 292 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 351
DVA L RK+ + PLN + FN +I FC ++ +L ++ PDV ++N L
Sbjct: 123 DVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTL 182
Query: 352 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML 411
L+ C + +I ++ + ++ + + +++ +++ M+
Sbjct: 183 LHGLCLED---------------RISEALALFGYMV---------ETGFLEAVALFDQMV 218
Query: 412 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 471
+ + P I N ++ C EG+ EA L+ +G++++ +Y I++ +CK K
Sbjct: 219 EIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTK 278
Query: 472 MALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIG 531
AL L+ +M + ++ P VV YS +I K+ + + A LF EM G
Sbjct: 279 SALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSD------------AQYLFSEMLEKG 326
Query: 532 CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKN 591
PN++TY C+IDGFC A +L +M + I PDV+T+ LI+ K G++ E
Sbjct: 327 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 386
Query: 592 KLFGEMKANCILLD 605
KL EM CI D
Sbjct: 387 KLCDEMLHRCIFPD 400
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 168/370 (45%), Gaps = 34/370 (9%)
Query: 235 LMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
++E G PN+ TY M+ S G A +L + NP V+T+ I + G
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 291 VDVAHKLVRK-LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 349
+ A KL + LH + P ++ +N++I+GFC+ ++A + + M S PDV ++N
Sbjct: 382 LFEAEKLCDEMLHRCIFP-DTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFN 436
Query: 350 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCK-NKLKGQQLYDKSLEVY 407
+++ +C+ V + + Y +LI C+ + L Q +++
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ------DLF 490
Query: 408 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 467
M+ + + P+TI CN +L C + EAL L E I+L+ +YN IIH +CK
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 468 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEM 527
S A +L + V P V Y+ +ISGF + + ++ A LF +M
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA------------ISDANVLFHKM 598
Query: 528 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 587
G P+ TY LI G K ID + +L EM+ G D T ++A GR+
Sbjct: 599 KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRL 657
Query: 588 GEKNKLFGEM 597
+K F +M
Sbjct: 658 ---DKSFSDM 664
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 197/452 (43%), Gaps = 36/452 (7%)
Query: 176 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 235
V +++ F+ L A + + +N GL + N +L+ +
Sbjct: 149 VMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEM 208
Query: 236 METGPLPNIHTYTIM-MSC---GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 291
G +P+ +Y +M + C G I+ A L + + G P T + LCE G V
Sbjct: 209 SVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLV 268
Query: 292 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 351
+ A RK+ N F ++I G C++G++ +A E+LEEM + P+VY++ L
Sbjct: 269 NRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 328
Query: 352 LNAFCKKGDVXXXXXXXXXXXXCQI-KPSIVNYTSLIL-LCK-NKLKGQQLYDKSLEVYN 408
++ CK+G KP++ YTS+I CK +KL ++ +++
Sbjct: 329 IDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEM------LFS 382
Query: 409 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 468
M + + PN ++ HC+ G F A L+ ++G N Y+YN I +CK+S
Sbjct: 383 RMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKS 442
Query: 469 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKE--------------QSNFEMVERL-- 512
A EL+ + + V Y+ LI K+ ++ FE RL
Sbjct: 443 RAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNN 502
Query: 513 -----FTRE--MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK 565
F R+ M + LFQ + +G +P TYT +I +CK IDLA + F MKR
Sbjct: 503 ILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRH 562
Query: 566 GIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
G PD TY LI+ K + E KL+ M
Sbjct: 563 GCVPDSFTYGSLISGLCKKSMVDEACKLYEAM 594
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 162/356 (45%), Gaps = 23/356 (6%)
Query: 235 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
+++ G PN+ +T ++ G I+ A E+L ++ R+G P V T+ I GLC+ G+
Sbjct: 278 MIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGW 337
Query: 291 VDVAHKLVRKL-HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 349
+ A +L KL + N H + ++I G+C+ +N A + MK FP+V +Y
Sbjct: 338 TEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYT 397
Query: 350 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYN 408
L+N CK G P+I Y + I LCK K + + Y E+ N
Sbjct: 398 TLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCK-KSRAPEAY----ELLN 452
Query: 409 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 468
+ + + +++ C++ +AL ++ G + N +I C++
Sbjct: 453 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 512
Query: 469 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMS 528
K + L ++ ++P Y+++IS + KE ++++A F M
Sbjct: 513 KMKESERLFQLVVSLGLIPTKETYTSMISCYCKEG------------DIDLALKYFHNMK 560
Query: 529 RIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 584
R GC+P+ +TY LI G CK +D A +L++ M +G+ P VT L Y K
Sbjct: 561 RHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKR 616
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 138/316 (43%), Gaps = 26/316 (8%)
Query: 316 VIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ 375
++ F + G +NEA+ ++ +M++ P + N +L + G +
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 376 IKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 435
+ P +Y +++ C K Q+ D+ L M+Q P+ C IL C G
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEA-DRWL---TGMIQRGFIPDNATCTLILTALCENGLV 268
Query: 436 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 495
A+ + G N ++ +I +CK+ K A E++ M++ P V ++ L
Sbjct: 269 NRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTAL 328
Query: 496 ISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCL-PNLYTYTCLIDGFCKIDYIDL 554
I G K R +T + A LF ++ R PN++TYT +I G+CK D ++
Sbjct: 329 IDGLCK---------RGWTEK---AFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNR 376
Query: 555 ATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL---------LD 605
A LF MK +G+FP+V TYT LI + K G G +L M + +D
Sbjct: 377 AEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAID 436
Query: 606 DGIKKLQDPKLVQFMN 621
KK + P+ + +N
Sbjct: 437 SLCKKSRAPEAYELLN 452
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 114/255 (44%), Gaps = 12/255 (4%)
Query: 235 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
+ E G PN++TYT +++ G A E++ + G P + TY I LC+
Sbjct: 384 MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSR 443
Query: 291 VDVAHKLVRK-LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 349
A++L+ K C L + + +I C++ +N+AL M + D+ N
Sbjct: 444 APEAYELLNKAFSCGLEA-DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNN 502
Query: 350 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYN 408
+L+ AFC++ + + P+ YTS+I CK + D +L+ ++
Sbjct: 503 ILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCK-----EGDIDLALKYFH 557
Query: 409 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 468
+M ++ P++ ++ C++ EA L E ++G++ + + + + CK +
Sbjct: 558 NMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRN 617
Query: 469 YPKMALELMPRMLKR 483
A+ L+ + K+
Sbjct: 618 DSANAMILLEPLDKK 632
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 116/489 (23%), Positives = 209/489 (42%), Gaps = 80/489 (16%)
Query: 157 DDSFEQFSTLL-DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFL 215
DD+ + F ++ P ++ + N +I VF + + A ++ + + L+I S N L
Sbjct: 88 DDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNIL 147
Query: 216 LKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--------------- 258
+KC L + G P++ T+ ++ C + R+
Sbjct: 148 IKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGF 207
Query: 259 --AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAV 316
A + ++ G P V+T+ T I GLC G V A LV K+ K ++ + +
Sbjct: 208 LEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267
Query: 317 IHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQI 376
++G C+ G AL +L +M+ + PDV Y+ +++ CK G
Sbjct: 268 VNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGH---------------- 311
Query: 377 KPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFR 436
+ + +++ ML+ I PN N ++ C G++
Sbjct: 312 -----------------------HSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWS 348
Query: 437 EALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLI 496
+A LL D E+ IN + ++N +I KE A +L ML R + P V Y+++I
Sbjct: 349 DAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMI 408
Query: 497 SGFAKEQSNFEMVERLF--------------------TREMNVACALFQEMSRIGCLPNL 536
GF K + F+ + +F + ++ L +E+SR G + N
Sbjct: 409 YGFCK-HNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANT 467
Query: 537 YTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE 596
TY LI GFC++D ++ A LF EM G+ PD +T +L+ + ++ ++ E +LF
Sbjct: 468 TTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEV 527
Query: 597 MKANCILLD 605
++ + I LD
Sbjct: 528 IQMSKIDLD 536
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/497 (23%), Positives = 198/497 (39%), Gaps = 69/497 (13%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
++ FN+LIK F L + F +G + + + N LL L
Sbjct: 140 NIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF 199
Query: 233 XXLMETGPLPNIHTYTIMMSCG-------------------DIRLAAEILGKIYRSGGNP 273
++ETG L + + M+ G + AA ++ K+ G +
Sbjct: 200 GYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHI 259
Query: 274 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL 333
VVTYGT + G+C+ G A L+ K+ + ++A+I C+ G ++A +
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319
Query: 334 EEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNK 393
EM P+V++YN +++ FC G +I P ++ + +LI +
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379
Query: 394 LK---GQQLYDKSLE--------VYNSMLQNAIR----------------PNTIICNHIL 426
K ++L D+ L YNSM+ + P+ + N I+
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTII 439
Query: 427 RVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL 486
V+CR + E + LL + +G+ N +YN +IH C+ A +L M+ V
Sbjct: 440 DVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVC 499
Query: 487 PGVVNYSTLISGFAKEQSNFEMVERLFTREM-----------------------NVACAL 523
P + + L+ GF + + E +E +M + A L
Sbjct: 500 PDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDL 559
Query: 524 FQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHK 583
F + G P++ TY +I GFC I A LF +MK G PD TY LI K
Sbjct: 560 FCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLK 619
Query: 584 HGRIGEKNKLFGEMKAN 600
G I + +L EM++N
Sbjct: 620 AGEIDKSIELISEMRSN 636
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 157/346 (45%), Gaps = 30/346 (8%)
Query: 235 LMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
++E G PN+ TY M+ S G A +L + NP V+T+ I + G
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381
Query: 291 VDVAHKLVRK-LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 349
+ A KL + LH + P ++ +N++I+GFC+ ++A + + M S PDV ++N
Sbjct: 382 LFEAEKLCDEMLHRCIFP-DTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFN 436
Query: 350 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCK-NKLKGQQLYDKSLEVY 407
+++ +C+ V + + Y +LI C+ + L Q +++
Sbjct: 437 TIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQ------DLF 490
Query: 408 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 467
M+ + + P+TI CN +L C + EAL L E I+L+ +YN IIH +CK
Sbjct: 491 QEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKG 550
Query: 468 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEM 527
S A +L + V P V Y+ +ISGF + + ++ A LF +M
Sbjct: 551 SKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSA------------ISDANVLFHKM 598
Query: 528 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVT 573
G P+ TY LI G K ID + +L EM+ G D T
Sbjct: 599 KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFT 644
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/535 (22%), Positives = 220/535 (41%), Gaps = 86/535 (16%)
Query: 150 IVGYCK---CDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGL 205
I G+CK D +F+ F + ++ ++ LI + ML H++F A + G+
Sbjct: 293 INGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGV 352
Query: 206 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--AAE 261
+L + + + ++ G PN+ TYTI++ C D R+ A
Sbjct: 353 KLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFG 412
Query: 262 ILGKIYRSGGNPTVVTYGTYIRGLCECG--------YVDV-------------------- 293
+ G+I + G P++VTY + I G C+CG Y D+
Sbjct: 413 MYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLS 472
Query: 294 -------AHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 346
A + K+ + LN FN++I G+C+ +EAL+V M PDV
Sbjct: 473 KQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVA 532
Query: 347 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCK--NKLKGQQLYD-- 401
++ ++ +G + ++P + Y +LI CK G QL+D
Sbjct: 533 TFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLM 592
Query: 402 --------------------------KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 435
+ + +N++++ + P+ + N ++ +C +
Sbjct: 593 QRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRL 652
Query: 436 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 495
EA + E N + +IH++CK + A+ + M ++ P V Y L
Sbjct: 653 DEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 712
Query: 496 ISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLA 555
+ F+K + ++ + LF+EM G P++ +Y+ +IDG CK +D A
Sbjct: 713 MDWFSK------------SVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEA 760
Query: 556 TQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKK 610
T +F + + PDVV Y +LI Y K GR+ E L+ M N + DD +++
Sbjct: 761 TNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQR 815
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 197/464 (42%), Gaps = 51/464 (10%)
Query: 177 FNVLIKVFASNSMLEHAHQVFVSA-KNVGLELHI------RS-----CNFLLKCLXXXXX 224
F + V N M + A +VF N G + ++ RS C FL++C
Sbjct: 102 FYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNVLGSIRDRSLDADVCKFLMECCCRYGM 161
Query: 225 XXXXXXXXXXLMETGP-LPNIHTYTIMMS---CGDIRLAAEILGKIYRSGGNPTVVTYGT 280
+ G +P Y ++ S + L A+ K+ R G P+ V+
Sbjct: 162 VDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHG 221
Query: 281 YIRGLCEC-GYVDVA---HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 336
++ C G V A H+LV + ++ ++ N V+ G + A +L +
Sbjct: 222 FVLDALFCKGEVTKALDFHRLVMERGFRVGIVSC---NKVLKGL-SVDQIEVASRLLSLV 277
Query: 337 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 396
P+V ++ L+N FCK+G++ I+P ++ Y++LI K
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI---DGYFKA 334
Query: 397 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 456
L ++++ L ++ + ++ + + V+ + G A + + QGI+ N +
Sbjct: 335 GML-GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVT 393
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK---EQSNF----EMV 509
Y +I +C++ A + ++LKR + P +V YS+LI GF K +S F +M+
Sbjct: 394 YTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMI 453
Query: 510 ERLFTREMNVACALFQEMSRIGCL----------------PNLYTYTCLIDGFCKIDYID 553
+ + ++ + L +S+ G + N+ + LIDG+C+++ D
Sbjct: 454 KMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFD 513
Query: 554 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
A ++F M GI PDV T+T ++ GR+ E LF M
Sbjct: 514 EALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM 557
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 463 MICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACA 522
+ CK K AL+ +++R G+V+ + ++ G + +Q E+ RL + ++ A
Sbjct: 227 LFCKGEVTK-ALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ--IEVASRLLSLVLDCGPA 283
Query: 523 LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYH 582
PN+ T+ LI+GFCK +D A LF M+++GI PD++ Y+ LI Y
Sbjct: 284 -----------PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 583 KHGRIGEKNKLFGEMKANCILLD 605
K G +G +KLF + + LD
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLD 355
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 178/420 (42%), Gaps = 71/420 (16%)
Query: 242 PNIHTYTIMMSCGD-----IRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHK 296
P++ TY +++ LA + ++ + +P + T+G + GL + G A K
Sbjct: 160 PDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQK 219
Query: 297 LVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 356
+ + + N + +I G CQRG+ ++A ++ EM++S +PD ++N LL+ FC
Sbjct: 220 MFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFC 279
Query: 357 KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIR 416
K G + + Y+SLI + L + Y ++ E+Y +ML+ I+
Sbjct: 280 KLGRMVEAFELLRLFEKDGFVLGLRGYSSLI----DGLFRARRYTQAFELYANMLKKNIK 335
Query: 417 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC----------- 465
P+ I+ +++ + G+ +AL LL +GI+ + Y YN +I +C
Sbjct: 336 PDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSL 395
Query: 466 ------KESYP------------------KMALELMPRMLKRNVLPGVVNYSTLISGFAK 501
ES+P + A E+ + K P V ++ LI G K
Sbjct: 396 QLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCK 455
Query: 502 EQSNFEMVERLFTREMNVACALFQEMSR---------------------------IGCLP 534
E L E+ +LF +S G P
Sbjct: 456 SGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSP 515
Query: 535 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
++ +Y LI+GFC+ ID A +L + ++ KG+ PD VTY LI H+ GR E KLF
Sbjct: 516 DIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLF 575
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/381 (23%), Positives = 154/381 (40%), Gaps = 65/381 (17%)
Query: 278 YGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMK 337
+G I L E D+ + + +L ++S+CF +I + + G +A+E MK
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 338 SSRTFPDVYSYN------------------------------------MLLNAFCKKGDV 361
PDV++YN +L++ KKG
Sbjct: 155 EFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRT 214
Query: 362 XXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTI 420
I P+ V YT LI LC+ +G D + +++ M + P+++
Sbjct: 215 SDAQKMFDDMTGRGISPNRVTYTILISGLCQ---RGSA--DDARKLFYEMQTSGNYPDSV 269
Query: 421 ICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRM 480
N +L C+ G+ EA LL F + G L Y+ +I + + A EL M
Sbjct: 270 AHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANM 329
Query: 481 LKRNVLPGVVNYSTLISGFAKE---QSNFEMVERLFTREM--NVAC-------------- 521
LK+N+ P ++ Y+ LI G +K + +++ + ++ + + C
Sbjct: 330 LKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLL 389
Query: 522 ----ALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 577
+L EMS P+ T+T LI C+ + A ++F E+++ G P V T+ L
Sbjct: 390 EEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNAL 449
Query: 578 IAWYHKHGRIGEKNKLFGEMK 598
I K G + E L +M+
Sbjct: 450 IDGLCKSGELKEARLLLHKME 470
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 125/295 (42%), Gaps = 19/295 (6%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
F VI + + + LEE+KS D Y + +L++A+ K G
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 373 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 432
+P + Y ++ + ++ + + + VYN ML+ PN ++ ++
Sbjct: 155 EFDCRPDVFTYNVIL---RVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKK 211
Query: 433 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 492
G+ +A + +D +GI+ N+ +Y +I +C+ A +L M P V +
Sbjct: 212 GRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAH 271
Query: 493 STLISGFAKEQSNFEMVE--RLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 550
+ L+ GF K E E RLF ++ G + L Y+ LIDG +
Sbjct: 272 NALLDGFCKLGRMVEAFELLRLFEKD--------------GFVLGLRGYSSLIDGLFRAR 317
Query: 551 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
A +L+ M +K I PD++ YT+LI K G+I + KL M + I D
Sbjct: 318 RYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPD 372
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 137/349 (39%), Gaps = 21/349 (6%)
Query: 178 NVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLME 237
+LI N ++ A ++F + G + + N L+ L ME
Sbjct: 412 TILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHK-ME 470
Query: 238 TGPLPNI---------HTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
G ++ ++ M+ G I A L +G +P +V+Y I G C
Sbjct: 471 VGRPASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRA 530
Query: 289 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 348
G +D A KL+ L K +S +N +I+G + G EA ++ R P V Y
Sbjct: 531 GDIDGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAV--Y 588
Query: 349 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYN 408
L+ C+K V +I + I C + + ++ + +E+
Sbjct: 589 RSLMTWSCRKRKVLVAFNLWMKYLK-KISCLDDETANEIEQCFKEGETERALRRLIELDT 647
Query: 409 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 468
+ + P TI + C+ G+F EAL + E+ I + S ++IH +CK
Sbjct: 648 RKDELTLGPYTIWLIGL----CQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKRE 703
Query: 469 YPKMALELMPRMLKRN--VLPGVVNYSTLISGFAKEQSNFEMVERLFTR 515
A+E+ L N ++P V NY L+S + E+V +L R
Sbjct: 704 QLDAAIEVFLYTLDNNFKLMPRVCNY--LLSSLLESTEKMEIVSQLTNR 750
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 171/384 (44%), Gaps = 33/384 (8%)
Query: 243 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 298
+++++T ++ C + LA LGK+ + G P++VT+G+ + G C A LV
Sbjct: 113 DLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLV 172
Query: 299 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
++ + N +N +I C++G VN AL+VL+ MK PDV +YN L+
Sbjct: 173 DQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHS 232
Query: 359 GDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 418
G I P ++ +++LI + +GQ L K + YN M+Q ++ PN
Sbjct: 233 GTWGVSARILSDMMRMGISPDVITFSALIDVYGK--EGQLLEAK--KQYNEMIQRSVNPN 288
Query: 419 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMP 478
+ N ++ C G EA +L +G N +YN +I+ CK ++++
Sbjct: 289 IVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILC 348
Query: 479 RMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTR----------------------- 515
M + V Y+TL G+ + F E++ R
Sbjct: 349 VMSRDGVDGDTFTYNTLYQGYC-QAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDH 407
Query: 516 -EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTY 574
++ A +++ + + + TY +I G CK D ++ A LF + KG+ PDV+TY
Sbjct: 408 GKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITY 467
Query: 575 TVLIAWYHKHGRIGEKNKLFGEMK 598
++ + E ++L+ +M+
Sbjct: 468 ITMMIGLRRKRLWREAHELYRKMQ 491
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 154/389 (39%), Gaps = 58/389 (14%)
Query: 119 GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFN 178
GF S+ F +++ F E +L+ IVG +E +V+++N
Sbjct: 144 GFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL-----GYEP----------NVVIYN 188
Query: 179 VLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMET 238
+I + A V K +G+ + + N L+ L +M
Sbjct: 189 TIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRM 248
Query: 239 GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
G P++ T++ ++ G + A + ++ + NP +VTY + I GLC G +D A
Sbjct: 249 GISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEA 308
Query: 295 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 354
K++ L K N+ +N +I+G+C+ V++ +++L M D ++YN L
Sbjct: 309 KKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQG 368
Query: 355 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 414
+C+ G + + +V M+
Sbjct: 369 YCQAGK---------------------------------------FSAAEKVLGRMVSCG 389
Query: 415 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 474
+ P+ N +L C G+ +AL LED + + +YN II +CK + A
Sbjct: 390 VHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAW 449
Query: 475 ELMPRMLKRNVLPGVVNYSTLISGFAKEQ 503
L + + V P V+ Y T++ G +++
Sbjct: 450 YLFCSLALKGVSPDVITYITMMIGLRRKR 478
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 400 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 459
++ +L ++ M ++ P+ + + +L + ++ ++L GI+ + YS+
Sbjct: 60 FNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFTT 119
Query: 460 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNV 519
+I C+ + +AL + +M+K P +V + +L++GF +E
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYE------------ 167
Query: 520 ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 579
A +L ++ +G PN+ Y +ID C+ ++ A + MK+ GI PDVVTY LI
Sbjct: 168 AMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLIT 227
Query: 580 WYHKHGRIGEKNKLFGEM 597
G G ++ +M
Sbjct: 228 RLFHSGTWGVSARILSDM 245
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 160/327 (48%), Gaps = 18/327 (5%)
Query: 272 NPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE 331
+P +++ I+ LC+ +VD A ++ R + + + + + ++ G C+ ++EA+
Sbjct: 184 SPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVL 243
Query: 332 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLC 390
+L+EM+S P YN+L++ CKKGD+ P+ V Y +LI LC
Sbjct: 244 LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 303
Query: 391 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 450
LKG+ DK++ + M+ + PN + ++ ++ + +A+ LL E+G
Sbjct: 304 ---LKGK--LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGY 358
Query: 451 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 510
+LNQ+ Y+ +I + KE + A+ L +M ++ P +V YS L+ G +E E E
Sbjct: 359 HLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKE 418
Query: 511 RLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPD 570
+ M GCLPN YTY+ L+ GF K + A Q++ EM + G +
Sbjct: 419 ------------ILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRN 466
Query: 571 VVTYTVLIAWYHKHGRIGEKNKLFGEM 597
Y+VLI GR+ E ++ +M
Sbjct: 467 KFCYSVLIDGLCGVGRVKEAMMVWSKM 493
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/513 (23%), Positives = 210/513 (40%), Gaps = 70/513 (13%)
Query: 127 FRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFAS 186
F ++ + A + + L +V +C S + F+++L NV+I
Sbjct: 115 FIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVL----------NVIINEGLY 164
Query: 187 NSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHT 246
+ LE V S N+ + + S N ++K L + E LP+ +T
Sbjct: 165 HRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYT 224
Query: 247 YTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH 302
Y +M C + R+ A +L ++ G +P+ V Y I GLC+ G + KLV +
Sbjct: 225 YCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMF 284
Query: 303 CKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK---- 358
K N +N +IHG C +G +++A+ +LE M SS+ P+ +Y L+N K+
Sbjct: 285 LKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAT 344
Query: 359 -------------------------------GDVXXXXXXXXXXXXCQIKPSIVNYTSLI 387
G KP+IV Y+ L+
Sbjct: 345 DAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLV 404
Query: 388 -LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFH 446
LC+ +G+ +++ E+ N M+ + PN + +++ + G EA+ + ++
Sbjct: 405 DGLCR---EGKP--NEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMD 459
Query: 447 EQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNF 506
+ G + N++ Y+ +I +C K A+ + +ML + P V YS++I G S
Sbjct: 460 KTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGS-- 517
Query: 507 EMVERLFTREMNVACALFQEM---SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 563
M+ A L+ EM P++ TY L+DG C I A L + M
Sbjct: 518 ----------MDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSML 567
Query: 564 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE 596
+G PDV+T + + +K + F E
Sbjct: 568 DRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLE 600
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/351 (23%), Positives = 146/351 (41%), Gaps = 69/351 (19%)
Query: 275 VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 334
++ G Y RGL YV + ++ + P N FN VI C+ V+ A+EV
Sbjct: 158 IINEGLYHRGLEFYDYV-----VNSNMNMNISP-NGLSFNLVIKALCKLRFVDRAIEVFR 211
Query: 335 EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKL 394
M + PD Y+Y L++ CK
Sbjct: 212 GMPERKCLPDGYTYCTLMDGLCK------------------------------------- 234
Query: 395 KGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQ 454
++ D+++ + + M P+ +I N ++ C++G L+++ +G N+
Sbjct: 235 --EERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNE 292
Query: 455 YSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFT 514
+YN +IH +C + A+ L+ RM+ +P V Y TLI+G K++ + V L +
Sbjct: 293 VTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSS 352
Query: 515 RE-----------------------MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 551
E A +L+++M+ GC PN+ Y+ L+DG C+
Sbjct: 353 MEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGK 412
Query: 552 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM-KANC 601
+ A ++ + M G P+ TY+ L+ + K G E +++ EM K C
Sbjct: 413 PNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGC 463
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 94/213 (44%), Gaps = 18/213 (8%)
Query: 399 LYDKSLEVYNSMLQN-AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLN---- 453
L DK++++++ M+ + + N +L V EG + L + +N+N
Sbjct: 127 LPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPN 186
Query: 454 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLF 513
S+N +I +CK + A+E+ M +R LP Y TL+ G KE+
Sbjct: 187 GLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEE---------- 236
Query: 514 TREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVT 573
++ A L EM GC P+ Y LIDG CK + T+L D M KG P+ VT
Sbjct: 237 --RIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVT 294
Query: 574 YTVLIAWYHKHGRIGEKNKLFGEM-KANCILLD 605
Y LI G++ + L M + CI D
Sbjct: 295 YNTLIHGLCLKGKLDKAVSLLERMVSSKCIPND 327
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 135 bits (340), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 180/385 (46%), Gaps = 28/385 (7%)
Query: 243 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 298
++++Y I+++C +A ++GK+ + G P VVT + I G C+ V A LV
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162
Query: 299 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
K+ + +N +I G C+ G VN+A+E+ + M+ D +YN L+ C
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222
Query: 359 GDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 418
G I P+++ +T++I + + K + +++++Y M + + P+
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK----FSEAMKLYEEMTRRCVDPD 278
Query: 419 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMP 478
N ++ C G+ EA +L+ +G + +YN +I+ CK +L
Sbjct: 279 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 338
Query: 479 RMLKRNVLPGVVNYSTLISGF---AKEQSNFEMVERLFTR-----------------EMN 518
M +R ++ + Y+T+I G+ + + E+ R+ +R +
Sbjct: 339 EMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIRTYSILLYGLCMNWRVE 398
Query: 519 VACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 578
A LF+ M + ++ TY +I G CKI ++ A LF + KG+ PDVV+YT +I
Sbjct: 399 KALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMI 458
Query: 579 AWYHKHGRIGEKNKLFGEMKANCIL 603
+ + + + + + L+ +M+ + +L
Sbjct: 459 SGFCRKRQWDKSDLLYRKMQEDGLL 483
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 180/377 (47%), Gaps = 27/377 (7%)
Query: 235 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
++++ PLP+I ++ ++S + L + + G + +Y I LC C
Sbjct: 60 MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 119
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
+A +V K+ + + +++I+GFCQ V +A++++ +M+ PDV YN
Sbjct: 120 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 179
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLEVYN 408
+++ CK G V ++ V Y SL+ L C + + + +
Sbjct: 180 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGR------WSDAARLMR 233
Query: 409 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 468
M+ I PN I ++ V +EG+F EA+ L E+ + ++ + ++YN +I+ +C
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 469 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMS 528
A +++ M+ + LP VV Y+TLI+GF K ++ ++ LF+EM+
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCK------------SKRVDEGTKLFREMA 341
Query: 529 RIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIG 588
+ G + + TY +I G+ + D A ++F M + P++ TY++L+ + R+
Sbjct: 342 QRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVE 398
Query: 589 EKNKLFGEMKANCILLD 605
+ LF M+ + I LD
Sbjct: 399 KALVLFENMQKSEIELD 415
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 145/309 (46%), Gaps = 20/309 (6%)
Query: 301 LHCKL---HPLNSHC-FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 356
L CK+ PL S F+ V+ + + + + M+ D+YSYN+++N C
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLC 115
Query: 357 KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIR 416
+ +P +V +SLI +G +++D ++++ + M + R
Sbjct: 116 RCSRFVIALSVVGKMMKFGYEPDVVTVSSLI---NGFCQGNRVFD-AIDLVSKMEEMGFR 171
Query: 417 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 476
P+ +I N I+ C+ G +A+ L + G+ + +YN ++ +C A L
Sbjct: 172 PDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARL 231
Query: 477 MPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNL 536
M M+ R+++P V+ ++ +I F KE E A L++EM+R P++
Sbjct: 232 MRDMVMRDIVPNVITFTAVIDVFVKEGKFSE------------AMKLYEEMTRRCVDPDV 279
Query: 537 YTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE 596
+TY LI+G C +D A Q+ D M KG PDVVTY LI + K R+ E KLF E
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339
Query: 597 MKANCILLD 605
M ++ D
Sbjct: 340 MAQRGLVGD 348
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 169/403 (41%), Gaps = 25/403 (6%)
Query: 172 HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXX 231
H + +N++I S A V G E + + + L+
Sbjct: 102 HDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDL 161
Query: 232 XXXLMETGPLPNIHTYTIMM--SC--GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE 287
+ E G P++ Y ++ SC G + A E+ ++ R G VTY + + GLC
Sbjct: 162 VSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCC 221
Query: 288 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 347
G A +L+R + + N F AVI F + G +EA+++ EEM PDV++
Sbjct: 222 SGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFT 281
Query: 348 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEV 406
YN L+N C G V P +V Y +LI CK+K D+ ++
Sbjct: 282 YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR-----VDEGTKL 336
Query: 407 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 466
+ M Q + +TI N I++ + + G+ A E F N +Y+ +++ +C
Sbjct: 337 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQ---EIFSRMDSRPNIRTYSILLYGLCM 393
Query: 467 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQE 526
+ AL L M K + + Y+ +I G K + A LF+
Sbjct: 394 NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCK------------IGNVEDAWDLFRS 441
Query: 527 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFP 569
+S G P++ +YT +I GFC+ D + L+ +M+ G+ P
Sbjct: 442 LSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 123/286 (43%), Gaps = 18/286 (6%)
Query: 322 QRGAVN--EALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPS 379
+R ++N E +++ +M SR P + ++ +L+ K + C I
Sbjct: 44 KRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHD 103
Query: 380 IVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREAL 439
+ +Y +I N L + +L V M++ P+ + + ++ C+ + +A+
Sbjct: 104 LYSYNIVI----NCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAI 159
Query: 440 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 499
L+ E G + YN II CK A+EL RM + V V Y++L++G
Sbjct: 160 DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 219
Query: 500 AKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLF 559
+ + A L ++M +PN+ T+T +ID F K A +L+
Sbjct: 220 C------------CSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLY 267
Query: 560 DEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
+EM R+ + PDV TY LI HGR+ E ++ M L D
Sbjct: 268 EEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPD 313
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/448 (23%), Positives = 189/448 (42%), Gaps = 36/448 (8%)
Query: 183 VFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLP 242
V+ SM E F G +R+CN +LK L ++E G +P
Sbjct: 177 VYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMP 236
Query: 243 NIHTYTIMM-SC---GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 298
+ T+ M+ SC GD+ +I ++ R + VTY I G + G ++ A +
Sbjct: 237 TVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFH 296
Query: 299 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
+ + + FN +I G+C++G ++A V +EM ++ +P +YN+ + A C
Sbjct: 297 GDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDF 356
Query: 359 GDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 418
G + P +V+Y +L+ +K + + SL +++ + I P+
Sbjct: 357 GRIDDARELLSSMAA----PDVVSYNTLM---HGYIKMGKFVEASL-LFDDLRAGDIHPS 408
Query: 419 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMP 478
+ N ++ C G A L E+ Q I + +Y ++ K MA E+
Sbjct: 409 IVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYD 468
Query: 479 RMLKRNVLPGVVNYSTLISG---FAKEQSNFEMVERLFTREMNV---------------- 519
ML++ + P Y+T G F + E + + +
Sbjct: 469 EMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKV 528
Query: 520 -----ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTY 574
A +++ R+G +P+ TYT +I G+ + +A L+DEM RK ++P V+TY
Sbjct: 529 GNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITY 588
Query: 575 TVLIAWYHKHGRIGEKNKLFGEMKANCI 602
VLI + K GR+ + + EMK +
Sbjct: 589 FVLIYGHAKAGRLEQAFQYSTEMKKRGV 616
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 180/432 (41%), Gaps = 29/432 (6%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
S + +N+LI F+ N +E A + + G + S N L++
Sbjct: 272 SEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVT 331
Query: 233 XXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
++ G P TY I + G I A E+L S P VV+Y T + G +
Sbjct: 332 DEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLS----SMAAPDVVSYNTLMHGYIKM 387
Query: 289 GYVDVAHKLVRKLHC-KLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 347
G A L L +HP + +N +I G C+ G + A + EEM + FPDV +
Sbjct: 388 GKFVEASLLFDDLRAGDIHP-SIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVIT 446
Query: 348 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLK-GQQLYDKSLEV 406
Y L+ F K G++ IKP YT+ + +L+ G DK+ +
Sbjct: 447 YTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAV---GELRLGDS--DKAFRL 501
Query: 407 YNSML-QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
+ M+ + P+ I N + C+ G +A+ G+ + +Y +I
Sbjct: 502 HEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYL 561
Query: 466 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQ 525
+ KMA L ML++ + P V+ Y LI G AK + A
Sbjct: 562 ENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAK------------AGRLEQAFQYST 609
Query: 526 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
EM + G PN+ T+ L+ G CK ID A + +M+ +GI P+ +YT+LI+
Sbjct: 610 EMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFE 669
Query: 586 RIGEKNKLFGEM 597
+ E KL+ EM
Sbjct: 670 KWEEVVKLYKEM 681
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 90/440 (20%), Positives = 168/440 (38%), Gaps = 33/440 (7%)
Query: 100 SLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVG------- 152
S N K+ ++F + GF+ + F +I + G+ + + + +++
Sbjct: 284 SKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTT 343
Query: 153 ------------YCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSA 200
+ + DD+ E S++ V+ +N L+ + A +F
Sbjct: 344 STYNIYICALCDFGRIDDARELLSSM---AAPDVVSYNTLMHGYIKMGKFVEASLLFDDL 400
Query: 201 KNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDI 256
+ + I + N L+ L + P++ TYT ++ G++
Sbjct: 401 RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNL 460
Query: 257 RLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKL-HCKLHPLNSHCFNA 315
+A E+ ++ R G P Y T G G D A +L ++ H + +N
Sbjct: 461 SMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNV 520
Query: 316 VIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ 375
I G C+ G + +A+E ++ PD +Y ++ + + G +
Sbjct: 521 RIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKR 580
Query: 376 IKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 435
+ PS++ Y LI + +Q + S E M + +RPN + N +L C+ G
Sbjct: 581 LYPSVITYFVLIYGHAKAGRLEQAFQYSTE----MKKRGVRPNVMTHNALLYGMCKAGNI 636
Query: 436 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 495
EA L E+GI N+YSY +I C + ++L ML + + P + L
Sbjct: 637 DEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL 696
Query: 496 ISGFAK--EQSNFEMVERLF 513
K E E +ERL
Sbjct: 697 FKHLEKDHESREVEFLERLL 716
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 95/230 (41%), Gaps = 20/230 (8%)
Query: 376 IKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 435
I P+++ + +++ C K L ++ +++ M + I + + N ++ + G+
Sbjct: 234 IMPTVITFNTMLDSC---FKAGDL-ERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKM 289
Query: 436 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 495
EA D G + YS+N +I CK+ A + ML + P Y+
Sbjct: 290 EEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIY 349
Query: 496 ISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLA 555
I F R ++ A L M+ P++ +Y L+ G+ K+ A
Sbjct: 350 ICALCD-----------FGR-IDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEA 393
Query: 556 TQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
+ LFD+++ I P +VTY LI + G + +L EM I D
Sbjct: 394 SLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPD 443
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 131/566 (23%), Positives = 235/566 (41%), Gaps = 86/566 (15%)
Query: 75 FNLSSVSPVPETNRELFHVVVRV-IKSLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHT 133
F + V+P N + ++V++++ K ++ AR F W+ GF V + +I+
Sbjct: 140 FETAGVAP----NLQTYNVLIKMSCKKKEFEKAR--GFLDWMWKEGFKPDVFSYSTVIND 193
Query: 134 FAMAGM---HLEVFALLRD-------------IVGYCKCDD---SFEQFSTLLDLP--HH 172
A AG LE+F + + I G+ K D + E + LL+ +
Sbjct: 194 LAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYP 253
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
+V N++I + ++ +++ K E + + + L+ L
Sbjct: 254 NVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVF 313
Query: 233 XXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
L E ++ TY M+ CG I+ + E L +I + +V+Y I+GL E
Sbjct: 314 NELDERKASIDVVTYNTMLGGFCRCGKIKESLE-LWRIMEHKNSVNIVSYNILIKGLLEN 372
Query: 289 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 348
G +D A + R + K + + + IHG C G VN+AL V++E++SS DVY+Y
Sbjct: 373 GKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432
Query: 349 NMLLNAFCKKGDVXXXXXXXXXXXXCQI-------------------------------- 376
+++ CKK + +
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492
Query: 377 ---KPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 432
+P++V+Y LI LCK G+ + ML+N +P+ + +L CR+
Sbjct: 493 NGCRPTVVSYNILICGLCKAGKFGE-----ASAFVKEMLENGWKPDLKTYSILLCGLCRD 547
Query: 433 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 492
+ AL L F + G+ + +N +IH +C A+ +M M RN +V Y
Sbjct: 548 RKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTY 607
Query: 493 STLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 552
+TL+ GF K + N A ++ M ++G P++ +Y ++ G C +
Sbjct: 608 NTLMEGFFK------------VGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGV 655
Query: 553 DLATQLFDEMKRKGIFPDVVTYTVLI 578
A + FD+ + GIFP V T+ +L+
Sbjct: 656 SYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 116/519 (22%), Positives = 207/519 (39%), Gaps = 75/519 (14%)
Query: 94 VVRVIKSLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGY 153
V++++KS A F S G++HS + I+ + M V ++ I
Sbjct: 13 VLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQ 72
Query: 154 -CKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNV-GLELHIRS 211
CKCD+ V +IK + NSM + A VF + + G E IRS
Sbjct: 73 ECKCDED----------------VALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRS 116
Query: 212 CNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIM--MSCG--DIRLAAEILGKIY 267
N LL G PN+ TY ++ MSC + A L ++
Sbjct: 117 YNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMW 176
Query: 268 RSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVN 327
+ G P V +Y T I L + G +D A +L ++ + + C+N +I GF +
Sbjct: 177 KEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHK 236
Query: 328 EALEVLEEM-KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSL 386
A+E+ + + + S +P+V ++N++++ K G V
Sbjct: 237 TAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRV------------------------- 271
Query: 387 ILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFH 446
D L+++ M QN + + ++ C G +A ++ +
Sbjct: 272 --------------DDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELD 317
Query: 447 EQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNF 506
E+ +++ +YN ++ C+ K +LEL M +N + +V+Y+ LI G
Sbjct: 318 ERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSV-NIVSYNILIKGL------- 369
Query: 507 EMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKG 566
L +++ A +++ M G + TY I G C Y++ A + E++ G
Sbjct: 370 -----LENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSG 424
Query: 567 IFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
DV Y +I K R+ E + L EM + + L+
Sbjct: 425 GHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELN 463
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 157/354 (44%), Gaps = 21/354 (5%)
Query: 245 HTYTIMMSCGDIRLAAEILGKIYRSGGNP-TVVTYGTYIRGLCECGYVDVAHKLVRKLHC 303
H ++ S + R A + R G + V Y +R L E V+ ++V +
Sbjct: 12 HVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRS 71
Query: 304 KLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSS-RTFPDVYSYNMLLNAFCKKGDVX 362
+ + +VI + + ++AL+V + M+ P + SYN LLNAF +
Sbjct: 72 QECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWV 131
Query: 363 XXXXXXXXXXXCQIKPSIVNYTSLILL-CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTII 421
+ P++ Y LI + CK K ++K+ + M + +P+
Sbjct: 132 KVESLFAYFETAGVAPNLQTYNVLIKMSCKKKE-----FEKARGFLDWMWKEGFKPDVFS 186
Query: 422 CNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRML 481
+ ++ + G+ +AL L ++ E+G+ + YN +I KE K A+EL R+L
Sbjct: 187 YSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLL 246
Query: 482 K-RNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYT 540
+ +V P V ++ +ISG +K ++ +++ M + +LYTY+
Sbjct: 247 EDSSVYPNVKTHNIMISGLSK------------CGRVDDCLKIWERMKQNEREKDLYTYS 294
Query: 541 CLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
LI G C +D A +F+E+ + DVVTY ++ + + G+I E +L+
Sbjct: 295 SLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELW 348
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 89/209 (42%), Gaps = 25/209 (11%)
Query: 418 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
+ ++ +HILR ++E Q ++ +I K S P AL++
Sbjct: 42 SAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVF 101
Query: 478 PRMLKRNVL---PGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLP 534
RM R + P + +Y+TL++ F E + VE LF A F+ G P
Sbjct: 102 KRM--REIFGCEPAIRSYNTLLNAFV-EAKQWVKVESLF--------AYFETA---GVAP 147
Query: 535 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
NL TY LI CK + A D M ++G PDV +Y+ +I K G++ + +LF
Sbjct: 148 NLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELF 207
Query: 595 GEMKANCILLD--------DGIKKLQDPK 615
EM + D DG K +D K
Sbjct: 208 DEMSERGVAPDVTCYNILIDGFLKEKDHK 236
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 111/491 (22%), Positives = 206/491 (41%), Gaps = 66/491 (13%)
Query: 162 QFSTLLDL--------PHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCN 213
QF+ LDL P S++ F L+ V A + + + +G+ + +CN
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 214 FLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--AAEILGKIYRS 269
L+ C +M+ G P+I T+T +++ C R+ A ++ ++
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEM 171
Query: 270 GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEA 329
G P VV Y T I LC+ G+V+ A L ++ + + ++++G C G +A
Sbjct: 172 GIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDA 231
Query: 330 LEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL 389
+L M + PDV ++N L++AF K+G I P+I YTSLI
Sbjct: 232 DSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLI-- 289
Query: 390 CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQG 449
N + D++ +++ M P+ + ++ C+ + +A+ + + ++G
Sbjct: 290 --NGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 450 INLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF---AKEQSNF 506
+ N +Y +I + P +A E+ M+ R V P + Y+ L+ K +
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKAL 407
Query: 507 EMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR-- 564
+ E + REM+ G PN++TY L+ G C ++ A +F++M++
Sbjct: 408 MIFEDMQKREMD------------GVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKRE 455
Query: 565 ---------------------------------KGIFPDVVTYTVLIAWYHKHGRIGEKN 591
KG+ P+VVTYT +I+ + G E +
Sbjct: 456 MDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAH 515
Query: 592 KLFGEMKANCI 602
LF +MK + +
Sbjct: 516 VLFRKMKEDGV 526
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 110/224 (49%), Gaps = 16/224 (7%)
Query: 382 NYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 441
NY ++ +N L Q ++++L+++ M+++ P+ I +L V + +F + L
Sbjct: 39 NYREIL---RNGLHSLQ-FNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINL 94
Query: 442 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 501
+ G++ + Y+ N +++ C+ S P +A + +M+K P +V +++LI+GF
Sbjct: 95 CDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFC- 153
Query: 502 EQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE 561
M A ++ +M +G P++ YT +ID CK +++ A LFD+
Sbjct: 154 -----------LGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQ 202
Query: 562 MKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
M+ GI PDVV YT L+ GR + + L M I D
Sbjct: 203 MENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPD 246
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/288 (21%), Positives = 122/288 (42%), Gaps = 15/288 (5%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
V+ FN LI F A +++ + + +I + L+
Sbjct: 246 DVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMF 305
Query: 233 XXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
+ G P++ YT +++ C + A +I ++ + G +TY T I+G +
Sbjct: 306 YLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQV 365
Query: 289 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSR---TFPDV 345
G +VA ++ + + P N +N ++H C G V +AL + E+M+ P++
Sbjct: 366 GKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNI 425
Query: 346 YSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCK-NKLKGQQLYDKS 403
++YN+LL+ C G + ++ I+ YT +I +CK K+K +
Sbjct: 426 WTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVK------NA 479
Query: 404 LEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 451
+ ++ S+ ++PN + ++ REG EA L E G++
Sbjct: 480 VNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGVS 527
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 132 bits (333), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/442 (24%), Positives = 186/442 (42%), Gaps = 27/442 (6%)
Query: 168 DLPHHSVLVF----NVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXX 223
++ H S VF N I V S E A ++ K +G L + + + L
Sbjct: 34 EMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVK 93
Query: 224 XXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYG 279
+ G +P+I + + + + A + + + G P VV+Y
Sbjct: 94 KFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYT 153
Query: 280 TYIRGLCECGYVDVAHKLVRKL-HCKLHPLNSHCFNAVIHGFCQRGAVNEALE-VLEEMK 337
I GL G V A ++ + + P N C A++ G C V+ A E V EE+K
Sbjct: 154 ILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKAC-AALVVGLCHARKVDLAYEMVAEEIK 212
Query: 338 SSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQ 397
S+R YN L++ FCK G + +P +V Y L+ N
Sbjct: 213 SARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLL----NYYYDN 268
Query: 398 QLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSY 457
+ ++ V M+++ I+ + N +L+ HCR + + E + SY
Sbjct: 269 NMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSY 328
Query: 458 NEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREM 517
+ +I C+ S + A L M ++ ++ VV Y++LI F +E ++
Sbjct: 329 STLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNS------------ 376
Query: 518 NVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 577
+VA L +M+ +G P+ YT ++D CK +D A +F++M I PD ++Y L
Sbjct: 377 SVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSL 436
Query: 578 IAWYHKHGRIGEKNKLFGEMKA 599
I+ + GR+ E KLF +MK
Sbjct: 437 ISGLCRSGRVTEAIKLFEDMKG 458
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 163/387 (42%), Gaps = 62/387 (16%)
Query: 235 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
+++ G P++ +YTI+++ G + A EI + RSG +P + GLC
Sbjct: 140 MVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARK 199
Query: 291 VDVAHKLV-RKLHCKLHPLNSHCFNAVIHGFCQRGAVN--EALE---------------- 331
VD+A+++V ++ L++ +NA+I GFC+ G + EAL+
Sbjct: 200 VDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYN 259
Query: 332 -----------------VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXC 374
V+ EM S D YSYN LL C+
Sbjct: 260 VLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEP 319
Query: 375 QIKPSIVNYTSLI-LLCK--NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 431
+ +V+Y++LI C+ N K +L+++ M Q + N + +++ R
Sbjct: 320 RGFCDVVSYSTLIETFCRASNTRKAYRLFEE-------MRQKGMVMNVVTYTSLIKAFLR 372
Query: 432 EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 491
EG A LL+ E G++ ++ Y I+ +CK A + M++ + P ++
Sbjct: 373 EGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAIS 432
Query: 492 YSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 551
Y++LISG + E ++ LF++M C P+ T+ +I G +
Sbjct: 433 YNSLISGLCRSGRVTEAIK------------LFEDMKGKECCPDELTFKFIIGGLIRGKK 480
Query: 552 IDLATQLFDEMKRKGIFPDVVTYTVLI 578
+ A +++D+M KG D LI
Sbjct: 481 LSAAYKVWDQMMDKGFTLDRDVSDTLI 507
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 141/316 (44%), Gaps = 23/316 (7%)
Query: 296 KLVRKLHCKLHPLN----SHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 351
+L ++ + P+ ++ I G C+ + +L +M++ PD++++N+
Sbjct: 61 ELAEAIYWDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVY 120
Query: 352 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML 411
L+ C++ V +P +V+YT LI N L ++E++N+M+
Sbjct: 121 LDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILI----NGLFRAGKVTDAVEIWNAMI 176
Query: 412 QNAIRPNTIICNHILRVHCREGQFREALTLL-EDFHEQGINLNQYSYNEIIHMICKESYP 470
++ + P+ C ++ C + A ++ E+ + L+ YN +I CK
Sbjct: 177 RSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRI 236
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI 530
+ A L M K P +V Y+ L++ + M++R A + EM R
Sbjct: 237 EKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNN----MLKR--------AEGVMAEMVRS 284
Query: 531 GCLPNLYTYTCLIDGFCKIDYIDLATQ-LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 589
G + Y+Y L+ C++ + D + EM+ +G F DVV+Y+ LI + + +
Sbjct: 285 GIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRG-FCDVVSYSTLIETFCRASNTRK 343
Query: 590 KNKLFGEMKANCILLD 605
+LF EM+ ++++
Sbjct: 344 AYRLFEEMRQKGMVMN 359
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 89/444 (20%), Positives = 161/444 (36%), Gaps = 65/444 (14%)
Query: 138 GMHLEVFALLRDIVGYCKC------DDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLE 191
G L F R I G CK D TL +P + FNV + + + +
Sbjct: 74 GFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIP--DIWAFNVYLDLLCRENKVG 131
Query: 192 HAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM 251
A Q F G E + S L+ L ++ +G P+ ++
Sbjct: 132 FAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALV 191
Query: 252 ----SCGDIRLAAEILGKIYRSGG-NPTVVTYGTYIRGLCECGYVDVAHKL---VRKLHC 303
+ LA E++ + +S + V Y I G C+ G ++ A L + K+ C
Sbjct: 192 VGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGC 251
Query: 304 KLH--------------------------------PLNSHCFNAVIHGFCQRGAVNEALE 331
+ L+++ +N ++ C+ ++
Sbjct: 252 EPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYN 311
Query: 332 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI---L 388
+ + R F DV SY+ L+ FC+ + + ++V YTSLI L
Sbjct: 312 FMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFL 371
Query: 389 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 448
N ++L D+ E+ + P+ I IL C+ G +A + D E
Sbjct: 372 REGNSSVAKKLLDQMTEL-------GLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEH 424
Query: 449 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF-------AK 501
I + SYN +I +C+ A++L M + P + + +I G A
Sbjct: 425 EITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAA 484
Query: 502 EQSNFEMVERLFTREMNVACALFQ 525
+ +M+++ FT + +V+ L +
Sbjct: 485 YKVWDQMMDKGFTLDRDVSDTLIK 508
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 102/266 (38%), Gaps = 59/266 (22%)
Query: 399 LYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYN 458
+ D +++V++ M ++ R + N + V RE +F A + D G +L ++Y+
Sbjct: 24 MIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYS 83
Query: 459 EII-----------------------------------HMICKESYPKMALELMPRMLKR 483
I ++C+E+ A++ M++R
Sbjct: 84 RFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQR 143
Query: 484 NVLPGVVNYSTLISGFAKEQSNFEMVE------RLFTREMNVACALF------------- 524
P VV+Y+ LI+G + + VE R N ACA
Sbjct: 144 GREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLA 203
Query: 525 -----QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 579
+E+ + Y LI GFCK I+ A L M + G PD+VTY VL+
Sbjct: 204 YEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLN 263
Query: 580 WYHKHGRIGEKNKLFGEMKANCILLD 605
+Y+ + + + EM + I LD
Sbjct: 264 YYYDNNMLKRAEGVMAEMVRSGIQLD 289
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 109/473 (23%), Positives = 203/473 (42%), Gaps = 31/473 (6%)
Query: 147 LRDIVGYCKCDDSFEQFSTLL-DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGL 205
LRDI K +D+ + FS ++ P S++ FN L+ + + + +G+
Sbjct: 61 LRDI----KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGI 116
Query: 206 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--AAE 261
+ + N ++ C +++ G P+ T +++ C R+ A
Sbjct: 117 RNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVS 176
Query: 262 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 321
++ K+ G P +V Y I LC+ V+ A +++ K N + A+++G C
Sbjct: 177 LVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLC 236
Query: 322 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 381
++A +L +M + P+V +Y+ LL+AF K G V I P IV
Sbjct: 237 NSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIV 296
Query: 382 NYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 441
Y+SLI N L D++ ++++ M+ + + N ++ C+ + + + L
Sbjct: 297 TYSSLI----NGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKL 352
Query: 442 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 501
+ ++G+ N +YN +I + A E +M + P + Y+ L+ G
Sbjct: 353 FREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCD 412
Query: 502 EQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE 561
E+ A +F++M + ++ TYT +I G CK ++ A LF
Sbjct: 413 NG------------ELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCS 460
Query: 562 MKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF------GEMKANCILLDDGI 608
+ KG+ PD+VTYT +++ G + E L+ G MK +C L D I
Sbjct: 461 LSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDI 513
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 179/399 (44%), Gaps = 55/399 (13%)
Query: 247 YTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH 302
+ ++SC DI +++ K+ P VVT G I LC+ VD A ++ K+
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMR 356
Query: 303 CK------LHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMK-SSRTFPDVYSYNMLLNAF 355
K + +S FN +I G C+ G + EA E+L MK R P+ +YN L++ +
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGY 416
Query: 356 CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LC----------------KNKLKGQQ 398
C+ G + +IKP++V +++ +C K +KG
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 399 L--------------YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 444
+ +K++ Y ML+ P+ I ++ C+ + +A+ ++E
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 445 FHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS 504
E G +L+ +YN +I + C ++ + E++ M K P + Y+TLIS F K +
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK- 595
Query: 505 NFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK- 563
+FE VER+ ++M G P + TY +ID +C + +D A +LF +M
Sbjct: 596 DFESVERMM-----------EQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 564 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
+ P+ V Y +LI + K G G+ L EMK +
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMV 683
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 158/397 (39%), Gaps = 61/397 (15%)
Query: 262 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 321
++ + G +P V +I LC+ + A ++ L PL + FNA++
Sbjct: 246 LISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLG 305
Query: 322 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ------ 375
+ ++ +++ +M + PDV + +L+N CK V +
Sbjct: 306 RNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNV 365
Query: 376 IKPSIVNYTSLI--------------LLCKNKLKGQ------------------QLYDKS 403
IK +++ +LI LL + KL+ + + +
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETA 425
Query: 404 LEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHM 463
EV + M ++ I+PN + N I+ CR A+ D ++G+ N +Y +IH
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 464 ICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF---AKEQSNFEMVERL----FTRE 516
C S + A+ +ML+ P Y LISG ++ +VE+L F+ +
Sbjct: 486 CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD 545
Query: 517 M---NVACALF-------------QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 560
+ N+ LF +M + G P+ TY LI F K + ++ +
Sbjct: 546 LLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Query: 561 EMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
+M+ G+ P V TY +I Y G + E KLF +M
Sbjct: 606 QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 144/333 (43%), Gaps = 9/333 (2%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
+ + +N LI + LE A +V K ++ ++ + N ++ +
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 233 XXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
+ + G N+ TY ++ S ++ A K+ +G +P Y I GLC+
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 289 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 348
A ++V KL L+ +N +I FC + + E+L +M+ PD +Y
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITY 584
Query: 349 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYN 408
N L++ F K D + P++ Y ++I + D++L+++
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI----DAYCSVGELDEALKLFK 640
Query: 409 SM-LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 467
M L + + PNT+I N ++ + G F +AL+L E+ + + N +YN + + ++
Sbjct: 641 DMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEK 700
Query: 468 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 500
+ + L+LM M++++ P + L+ +
Sbjct: 701 TQGETLLKLMDEMVEQSCEPNQITMEILMERLS 733
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 130/322 (40%), Gaps = 29/322 (9%)
Query: 274 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL 333
TVV IR G V+ + + +L + NS N V+ + G V++A +VL
Sbjct: 151 TVVATNLLIRWFGRMGMVNQSVLVYERLDSNMK--NSQVRNVVVDVLLRNGLVDDAFKVL 208
Query: 334 EEM--KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ--IKPSIVNYTSLIL- 388
+EM K S P+ + +++L+ K + + P+ V T I
Sbjct: 209 DEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISS 268
Query: 389 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 448
LCKN + +D + + +++N N +L R L+ E
Sbjct: 269 LCKNA-RANAAWD----ILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEV 323
Query: 449 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPG------VVNYSTLISGFAKE 502
I + + +I+ +CK ALE+ +M + G ++++TLI G K
Sbjct: 324 KIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKV 383
Query: 503 QSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM 562
E E L ++ CA PN TY CLIDG+C+ ++ A ++ M
Sbjct: 384 GRLKEAEELLVRMKLEERCA-----------PNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 563 KRKGIFPDVVTYTVLIAWYHKH 584
K I P+VVT ++ +H
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRH 454
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 109/463 (23%), Positives = 187/463 (40%), Gaps = 63/463 (13%)
Query: 130 IIHTFAMAGMHLEVFALLRDIVGYC------KCDDSFEQFSTLLDLPHHSVLVFNVLIKV 183
I +G+ + V++L + G C K ++FS P +N +I
Sbjct: 211 IFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPE--AYTYNTIINA 268
Query: 184 FASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPN 243
+ V K G+ + + L++ + E G +
Sbjct: 269 YVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESD 328
Query: 244 IHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVR 299
+H YT ++S G+++ A + ++ G +P+ TYG I G+C+ G + A L+
Sbjct: 329 VHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMN 388
Query: 300 KLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKG 359
++ K + FN +I G+C++G V+EA + + M+ DV++ N + + F
Sbjct: 389 EMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCF---- 444
Query: 360 DVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNT 419
N+LK YD++ + M++ ++ +T
Sbjct: 445 --------------------------------NRLK---RYDEAKQWLFRMMEGGVKLST 469
Query: 420 IICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPR 479
+ +++ V+C+EG EA L + +G+ N +YN +I+ CK+ K A +L
Sbjct: 470 VSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRAN 529
Query: 480 MLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTY 539
M + P Y++LI G ++ A LF EM G N TY
Sbjct: 530 MEANGMDPDSYTYTSLIHG------------ECIADNVDEAMRLFSEMGLKGLDQNSVTY 577
Query: 540 TCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYH 582
T +I G K D A L+DEMKRKG D YT LI H
Sbjct: 578 TVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMH 620
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/471 (23%), Positives = 191/471 (40%), Gaps = 57/471 (12%)
Query: 178 NVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLME 237
+++ +V+ N M E +VF GL + RSC L +++
Sbjct: 158 DLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVD 217
Query: 238 TGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE------ 287
+G +++ TI++ G++ + +++ + G P TY T I +
Sbjct: 218 SGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSG 277
Query: 288 -----------------------------CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIH 318
G + A KL ++ + + H + ++I
Sbjct: 278 VEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLIS 337
Query: 319 GFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKP 378
C++G + A + +E+ P Y+Y L++ CK G++ +
Sbjct: 338 WNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNI 397
Query: 379 SIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFRE 437
+ V + +LI C+ KG + D++ +Y+ M Q + + CN I R ++ E
Sbjct: 398 TQVVFNTLIDGYCR---KG--MVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDE 452
Query: 438 ALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 497
A L E G+ L+ SY +I + CKE + A L M + V P + Y+ +I
Sbjct: 453 AKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIY 512
Query: 498 GFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 557
+ K+ ++ A L M G P+ YTYT LI G C D +D A +
Sbjct: 513 AYCKQG------------KIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMR 560
Query: 558 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 608
LF EM KG+ + VTYTV+I+ K G+ E L+ EMK +D+ +
Sbjct: 561 LFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKV 611
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 176/390 (45%), Gaps = 36/390 (9%)
Query: 243 NIHTYTIMMS--CGDIRLAAEIL---GKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 297
N HTY+ ++ C +L +L ++ G P+VV++ + + G C+ G+VD+A
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIG-PSVVSFNSIMSGYCKLGFVDMAKSF 244
Query: 298 V-RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 356
L C L P + + N +I+G C G++ EALE+ +M PD +YN+L F
Sbjct: 245 FCTVLKCGLVP-SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFH 303
Query: 357 KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIR 416
G + + P ++ YT ILLC G D L + ML
Sbjct: 304 LLGMISGAWEVIRDMLDKGLSPDVITYT--ILLCGQCQLGN--IDMGLVLLKDMLSRGFE 359
Query: 417 PNTII-CNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 475
N+II C+ +L C+ G+ EAL+L G++ + +Y+ +IH +CK MAL
Sbjct: 360 LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW 419
Query: 476 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFE---MVERLFTREMNV------------- 519
L M + +LP + L+ G ++ E +++ L + +
Sbjct: 420 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 479
Query: 520 -------ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
A LF+ + G P++ T+ LI G+CK I A ++ D +K G+ P VV
Sbjct: 480 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV 539
Query: 573 TYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
+YT L+ Y G ++L EMKA I
Sbjct: 540 SYTTLMDAYANCGNTKSIDELRREMKAEGI 569
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 137/298 (45%), Gaps = 17/298 (5%)
Query: 309 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 368
N H ++ V+ G C++ + +A+ L + P V S+N +++ +CK G V
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 369 XXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRV 428
C + PS+ ++ LI N L ++LE+ + M ++ + P+++ N + +
Sbjct: 246 CTVLKCGLVPSVYSHNILI----NGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKG 301
Query: 429 HCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV-LP 487
G A ++ D ++G++ + +Y ++ C+ M L L+ ML R L
Sbjct: 302 FHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Query: 488 GVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 547
++ S ++SG K T ++ A +LF +M G P+L Y+ +I G C
Sbjct: 362 SIIPCSVMLSGLCK------------TGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 548 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
K+ D+A L+DEM K I P+ T+ L+ + G + E L + ++ LD
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLD 467
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 190/491 (38%), Gaps = 84/491 (17%)
Query: 150 IVGYCKCDDSFEQFSTLLDLPHHSV----LVFNVLIKVFASNSMLEHAHQVFVSAKNVGL 205
I G C E D+ H V + +N+L K F M+ A +V + GL
Sbjct: 264 INGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGL 323
Query: 206 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETG-PLPNIHTYTIMMS----CGDIRLAA 260
+ + LL ++ G L +I ++M+S G I A
Sbjct: 324 SPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEAL 383
Query: 261 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 320
+ ++ G +P +V Y I GLC+ G D+A L ++ K NS A++ G
Sbjct: 384 SLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGL 443
Query: 321 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 380
CQ+G + EA +L+ + SS D+ YN++++ + K G + I PS+
Sbjct: 444 CQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSV 503
Query: 381 VNYTSLIL-LCK--NKLKGQQLYD---------------------------KSL-EVYNS 409
+ SLI CK N + +++ D KS+ E+
Sbjct: 504 ATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRRE 563
Query: 410 MLQNAIRPNTII----------------CNHILRVHCREGQFREALTLLEDFHEQGINLN 453
M I P + CNH+LR E F + L D +GI +
Sbjct: 564 MKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLR----ERIFEKCKQGLRDMESEGIPPD 619
Query: 454 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS-----GFAKEQSNFEM 508
Q +YN II +C+ + A + M RN+ Y+ LI G+ ++ +F
Sbjct: 620 QITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF-- 677
Query: 509 VERLFT-REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 567
+++ +E NV+ + F YT LI C ++A +LF ++ +G
Sbjct: 678 ---IYSLQEQNVSLSKF-------------AYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
Query: 568 FPDVVTYTVLI 578
+ Y+ +I
Sbjct: 722 NVSIRDYSAVI 732
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/462 (19%), Positives = 182/462 (39%), Gaps = 70/462 (15%)
Query: 105 IAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIV------------- 151
IA + S + HG + I+ F + GM + ++RD++
Sbjct: 273 IAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTI 332
Query: 152 ---GYCKCDDSFEQFSTLLDLPH-----HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNV 203
G C+ + L D+ +S++ +V++ ++ A +F K
Sbjct: 333 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 204 GLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLA 259
GL + + + ++ L + + LPN T+ ++ G + A
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 260 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRK-LHCKLHPLNSHCFNAVIH 318
+L + SG +V Y I G + G ++ A +L + + + P + FN++I+
Sbjct: 453 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP-SVATFNSLIY 511
Query: 319 GFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKP 378
G+C+ + EA ++L+ +K P V SY L++A+ G+ I P
Sbjct: 512 GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Query: 379 SIVNYTSLIL-LCK-------NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 430
+ V Y+ + LC+ N + +++++K + M I P+ I N I++ C
Sbjct: 572 TNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLC 631
Query: 431 R-----------------------------------EGQFREALTLLEDFHEQGINLNQY 455
R G R+A + + EQ ++L+++
Sbjct: 632 RVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKF 691
Query: 456 SYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 497
+Y +I C + P+MA++L ++L R + +YS +I+
Sbjct: 692 AYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 733
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 143/321 (44%), Gaps = 53/321 (16%)
Query: 313 FNAVIHGFCQRGAVNE-----ALEVLEEMKSS---------RTFPDVY-----SYNMLLN 353
F +HG+ RG V+E E+++E+ S + D+Y S++ LL
Sbjct: 31 FREFLHGYHFRGLVSELRHVHVEEIMDELMSESSDLSVWFFKELRDIYAFRHSSFSTLLV 90
Query: 354 AFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTS------LILLCKNKLKGQQLYDKSLEVY 407
+ G Q + + + S ++L ++L+ + D SL +
Sbjct: 91 SHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDMLLFLSSRLR---MVDDSLYIL 147
Query: 408 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 467
M + +T N +L FRE + D +++ + N+++Y+ ++ +C++
Sbjct: 148 KKMKDQNLNVSTQSYNSVLY------HFRETDKMW-DVYKEIKDKNEHTYSTVVDGLCRQ 200
Query: 468 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEM 527
+ A+ + +++ P VV++++++SG+ K +++A + F +
Sbjct: 201 QKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCK------------LGFVDMAKSFFCTV 248
Query: 528 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 587
+ G +P++Y++ LI+G C + I A +L +M + G+ PD VTY +L +H G I
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 588 GEKNKLFGEMKANCILLDDGI 608
++ +M LD G+
Sbjct: 309 SGAWEVIRDM------LDKGL 323
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 119/491 (24%), Positives = 200/491 (40%), Gaps = 36/491 (7%)
Query: 119 GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFN 178
G+ +V+ F +I FA G +LL E S+ LD ++++N
Sbjct: 198 GYEPTVHLFTTLIRGFAKEGRVDSALSLLD------------EMKSSSLD---ADIVLYN 242
Query: 179 VLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMET 238
V I F ++ A + F + GL+ + ++ L L +
Sbjct: 243 VCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKN 302
Query: 239 GPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
+P + Y M+ S G A +L + G P+V+ Y + L + G VD A
Sbjct: 303 RRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEA 362
Query: 295 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 354
K+ ++ P N +N +I C+ G ++ A E+ + M+ + FP+V + N++++
Sbjct: 363 LKVFEEMKKDAAP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDR 421
Query: 355 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 414
CK + P + + SLI + L D + +VY ML +
Sbjct: 422 LCKSQKLDEACAMFEEMDYKVCTPDEITFCSLI----DGLGKVGRVDDAYKVYEKMLDSD 477
Query: 415 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 474
R N+I+ +++ G+ + + +D Q + + N + + K P+
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGR 537
Query: 475 ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLP 534
+ + R +P +YS LI G K E E LF M GC+
Sbjct: 538 AMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE------------LFYSMKEQGCVL 585
Query: 535 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
+ Y +IDGFCK ++ A QL +EMK KG P VVTY +I K R+ E LF
Sbjct: 586 DTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLF 645
Query: 595 GEMKANCILLD 605
E K+ I L+
Sbjct: 646 EEAKSKRIELN 656
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 101/355 (28%), Positives = 170/355 (47%), Gaps = 33/355 (9%)
Query: 273 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 332
P Y T I + D+ L +++ + H F +I GF + G V+ AL +
Sbjct: 166 PAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSL 225
Query: 333 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCK 391
L+EMKSS D+ YN+ +++F K G V +KP V YTS+I +LCK
Sbjct: 226 LDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCK 285
Query: 392 -NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 450
N+L D+++E++ + +N P T N ++ + G+F EA +LLE +G
Sbjct: 286 ANRL------DEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGS 339
Query: 451 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF---AKEQSNFE 507
+ +YN I+ + K AL++ M K++ P + Y+ LI K + FE
Sbjct: 340 IPSVIAYNCILTCLRKMGKVDEALKVFEEM-KKDAAPNLSTYNILIDMLCRAGKLDTAFE 398
Query: 508 -------------------MVERL-FTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 547
MV+RL +++++ ACA+F+EM C P+ T+ LIDG
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458
Query: 548 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM-KANC 601
K+ +D A +++++M + + YT LI + HGR + +K++ +M NC
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNC 513
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 114/483 (23%), Positives = 198/483 (40%), Gaps = 38/483 (7%)
Query: 150 IVGYCKCDDSFEQFSTLLDLPHH-----SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVG 204
I+GY F++ +LL+ SV+ +N ++ ++ A +VF K
Sbjct: 315 IMGYGSAG-KFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDA 373
Query: 205 LELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGDIRL--AA 260
++ + N L+ L + + G PN+ T IM+ C +L A
Sbjct: 374 AP-NLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEAC 432
Query: 261 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 320
+ ++ P +T+ + I GL + G VD A+K+ K+ NS + ++I F
Sbjct: 433 AMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNF 492
Query: 321 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 380
G + ++ ++M + PD+ N ++ K G+ + P
Sbjct: 493 FNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDA 552
Query: 381 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 440
+Y+ LI + L +++ E++ SM + +T N ++ C+ G+ +A
Sbjct: 553 RSYSILI----HGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQ 608
Query: 441 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 500
LLE+ +G +Y +I + K A L + + VV YS+LI GF
Sbjct: 609 LLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFG 668
Query: 501 K------------EQSNFEMVERLFT-----------REMNVACALFQEMSRIGCLPNLY 537
K E + L+T E+N A FQ M + C PN
Sbjct: 669 KVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQV 728
Query: 538 TYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
TY LI+G CK+ + A + EM+++G+ P ++YT +I+ K G I E LF
Sbjct: 729 TYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRF 788
Query: 598 KAN 600
KAN
Sbjct: 789 KAN 791
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/431 (22%), Positives = 177/431 (41%), Gaps = 48/431 (11%)
Query: 155 KCDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCN 213
+ DD+++ + +LD + +V+ LIK F ++ E H+++ N ++ N
Sbjct: 462 RVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLN 521
Query: 214 FLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNP 273
+ C M G+ + +I P
Sbjct: 522 TYMDC-------------------------------MFKAGEPEKGRAMFEEIKARRFVP 550
Query: 274 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL 333
+Y I GL + G+ + ++L + + L++ +N VI GFC+ G VN+A ++L
Sbjct: 551 DARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLL 610
Query: 334 EEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNK 393
EEMK+ P V +Y +++ K + +I+ ++V Y+SLI +
Sbjct: 611 EEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI----DG 666
Query: 394 LKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLN 453
D++ + ++Q + PN N +L + + EAL + E N
Sbjct: 667 FGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPN 726
Query: 454 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLF 513
Q +Y +I+ +CK A M K+ + P ++Y+T+ISG AK + E
Sbjct: 727 QVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE------ 780
Query: 514 TREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVT 573
A ALF G +P+ Y +I+G + A LF+E +R+G+ T
Sbjct: 781 ------AGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKT 834
Query: 574 YTVLIAWYHKH 584
VL+ HK+
Sbjct: 835 CVVLLDTLHKN 845
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 148/358 (41%), Gaps = 28/358 (7%)
Query: 265 KIYRSGGN----PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 320
KIY+ N P + TY+ + + G + + ++ + ++ ++ +IHG
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGL 562
Query: 321 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 380
+ G NE E+ MK D +YN++++ FCK G V +P++
Sbjct: 563 IKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTV 622
Query: 381 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 440
V Y S+I + L D++ ++ I N +I + ++ + G+ EA
Sbjct: 623 VTYGSVI----DGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYL 678
Query: 441 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 500
+LE+ ++G+ N Y++N ++ + K AL M + P V Y LI+G
Sbjct: 679 ILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLC 738
Query: 501 KEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 560
K R+ N A +QEM + G P+ +YT +I G K I A LFD
Sbjct: 739 K------------VRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFD 786
Query: 561 EMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK--------ANCILLDDGIKK 610
K G PD Y +I R + LF E + C++L D + K
Sbjct: 787 RFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHK 844
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 15/154 (9%)
Query: 456 SYNEIIHMI---CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 512
S N I M+ K + + +++ M K P Y+TLI F+ + M+
Sbjct: 132 SVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMML--- 188
Query: 513 FTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
LFQ+M +G P ++ +T LI GF K +D A L DEMK + D+V
Sbjct: 189 ---------TLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 573 TYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 606
Y V I + K G++ K F E++AN + D+
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDE 273
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 132 bits (331), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 108/390 (27%), Positives = 176/390 (45%), Gaps = 36/390 (9%)
Query: 243 NIHTYTIMMS--CGDIRLAAEIL---GKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 297
N HTY+ ++ C +L +L ++ G P+VV++ + + G C+ G+VD+A
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIG-PSVVSFNSIMSGYCKLGFVDMAKSF 244
Query: 298 V-RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 356
L C L P + + N +I+G C G++ EALE+ +M PD +YN+L F
Sbjct: 245 FCTVLKCGLVP-SVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFH 303
Query: 357 KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIR 416
G + + P ++ YT ILLC G D L + ML
Sbjct: 304 LLGMISGAWEVIRDMLDKGLSPDVITYT--ILLCGQCQLGN--IDMGLVLLKDMLSRGFE 359
Query: 417 PNTII-CNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 475
N+II C+ +L C+ G+ EAL+L G++ + +Y+ +IH +CK MAL
Sbjct: 360 LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW 419
Query: 476 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFE---MVERLFTREMNV------------- 519
L M + +LP + L+ G ++ E +++ L + +
Sbjct: 420 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 479
Query: 520 -------ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
A LF+ + G P++ T+ LI G+CK I A ++ D +K G+ P VV
Sbjct: 480 KSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVV 539
Query: 573 TYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
+YT L+ Y G ++L EMKA I
Sbjct: 540 SYTTLMDAYANCGNTKSIDELRREMKAEGI 569
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 137/298 (45%), Gaps = 17/298 (5%)
Query: 309 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 368
N H ++ V+ G C++ + +A+ L + P V S+N +++ +CK G V
Sbjct: 186 NEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFF 245
Query: 369 XXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRV 428
C + PS+ ++ LI N L ++LE+ + M ++ + P+++ N + +
Sbjct: 246 CTVLKCGLVPSVYSHNILI----NGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKG 301
Query: 429 HCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV-LP 487
G A ++ D ++G++ + +Y ++ C+ M L L+ ML R L
Sbjct: 302 FHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELN 361
Query: 488 GVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 547
++ S ++SG K T ++ A +LF +M G P+L Y+ +I G C
Sbjct: 362 SIIPCSVMLSGLCK------------TGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLC 409
Query: 548 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
K+ D+A L+DEM K I P+ T+ L+ + G + E L + ++ LD
Sbjct: 410 KLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLD 467
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 190/491 (38%), Gaps = 84/491 (17%)
Query: 150 IVGYCKCDDSFEQFSTLLDLPHHSV----LVFNVLIKVFASNSMLEHAHQVFVSAKNVGL 205
I G C E D+ H V + +N+L K F M+ A +V + GL
Sbjct: 264 INGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGL 323
Query: 206 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETG-PLPNIHTYTIMMS----CGDIRLAA 260
+ + LL ++ G L +I ++M+S G I A
Sbjct: 324 SPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEAL 383
Query: 261 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 320
+ ++ G +P +V Y I GLC+ G D+A L ++ K NS A++ G
Sbjct: 384 SLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGL 443
Query: 321 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 380
CQ+G + EA +L+ + SS D+ YN++++ + K G + I PS+
Sbjct: 444 CQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSV 503
Query: 381 VNYTSLIL-LCK--NKLKGQQLYD---------------------------KSL-EVYNS 409
+ SLI CK N + +++ D KS+ E+
Sbjct: 504 ATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRRE 563
Query: 410 MLQNAIRPNTII----------------CNHILRVHCREGQFREALTLLEDFHEQGINLN 453
M I P + CNH+LR E F + L D +GI +
Sbjct: 564 MKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLR----ERIFEKCKQGLRDMESEGIPPD 619
Query: 454 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS-----GFAKEQSNFEM 508
Q +YN II +C+ + A + M RN+ Y+ LI G+ ++ +F
Sbjct: 620 QITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSF-- 677
Query: 509 VERLFT-REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 567
+++ +E NV+ + F YT LI C ++A +LF ++ +G
Sbjct: 678 ---IYSLQEQNVSLSKF-------------AYTTLIKAHCVKGDPEMAVKLFHQLLHRGF 721
Query: 568 FPDVVTYTVLI 578
+ Y+ +I
Sbjct: 722 NVSIRDYSAVI 732
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 90/462 (19%), Positives = 182/462 (39%), Gaps = 70/462 (15%)
Query: 105 IAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIV------------- 151
IA + S + HG + I+ F + GM + ++RD++
Sbjct: 273 IAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTI 332
Query: 152 ---GYCKCDDSFEQFSTLLDLPH-----HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNV 203
G C+ + L D+ +S++ +V++ ++ A +F K
Sbjct: 333 LLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKAD 392
Query: 204 GLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLA 259
GL + + + ++ L + + LPN T+ ++ G + A
Sbjct: 393 GLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 260 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRK-LHCKLHPLNSHCFNAVIH 318
+L + SG +V Y I G + G ++ A +L + + + P + FN++I+
Sbjct: 453 RSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITP-SVATFNSLIY 511
Query: 319 GFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKP 378
G+C+ + EA ++L+ +K P V SY L++A+ G+ I P
Sbjct: 512 GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Query: 379 SIVNYTSLIL-LCK-------NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 430
+ V Y+ + LC+ N + +++++K + M I P+ I N I++ C
Sbjct: 572 TNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLC 631
Query: 431 R-----------------------------------EGQFREALTLLEDFHEQGINLNQY 455
R G R+A + + EQ ++L+++
Sbjct: 632 RVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKF 691
Query: 456 SYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 497
+Y +I C + P+MA++L ++L R + +YS +I+
Sbjct: 692 AYTTLIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVIN 733
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/321 (21%), Positives = 143/321 (44%), Gaps = 53/321 (16%)
Query: 313 FNAVIHGFCQRGAVNE-----ALEVLEEMKSS---------RTFPDVY-----SYNMLLN 353
F +HG+ RG V+E E+++E+ S + D+Y S++ LL
Sbjct: 31 FREFLHGYHFRGLVSELRHVHVEEIMDELMSESSDLSVWFFKELRDIYAFRHSSFSTLLV 90
Query: 354 AFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTS------LILLCKNKLKGQQLYDKSLEVY 407
+ G Q + + + S ++L ++L+ + D SL +
Sbjct: 91 SHVLAGQRRFKELQVILEQLLQEEGTFRKWESTGLVWDMLLFLSSRLR---MVDDSLYIL 147
Query: 408 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 467
M + +T N +L FRE + D +++ + N+++Y+ ++ +C++
Sbjct: 148 KKMKDQNLNVSTQSYNSVLY------HFRETDKMW-DVYKEIKDKNEHTYSTVVDGLCRQ 200
Query: 468 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEM 527
+ A+ + +++ P VV++++++SG+ K +++A + F +
Sbjct: 201 QKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCK------------LGFVDMAKSFFCTV 248
Query: 528 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 587
+ G +P++Y++ LI+G C + I A +L +M + G+ PD VTY +L +H G I
Sbjct: 249 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMI 308
Query: 588 GEKNKLFGEMKANCILLDDGI 608
++ +M LD G+
Sbjct: 309 SGAWEVIRDM------LDKGL 323
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 179/399 (44%), Gaps = 55/399 (13%)
Query: 247 YTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH 302
+ ++SC DI +++ K+ P VVT G I LC+ VD A ++ ++
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 303 CK------LHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMK-SSRTFPDVYSYNMLLNAF 355
K + +S FN +I G C+ G + EA E+L MK R P+ +YN L++ +
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 356 CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LC----------------KNKLKGQQ 398
C+ G + +IKP++V +++ +C K +KG
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 399 L--------------YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 444
+ +K++ Y ML+ P+ I ++ C+ + +A+ ++E
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 445 FHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS 504
E G +L+ +YN +I + C ++ + E++ M K P + Y+TLIS F K +
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK- 595
Query: 505 NFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK- 563
+FE VER+ ++M G P + TY +ID +C + +D A +LF +M
Sbjct: 596 DFESVERMM-----------EQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 564 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
+ P+ V Y +LI + K G G+ L EMK +
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMV 683
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 159/397 (40%), Gaps = 61/397 (15%)
Query: 262 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 321
++ + G +P V +I LC+ + A ++ L PL + FNA++
Sbjct: 246 LISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLG 305
Query: 322 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ------ 375
+ ++ +++ +M + PDV + +L+N CK V +
Sbjct: 306 RNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNV 365
Query: 376 IKPSIVNYTSLI--------------LLCKNKLKGQQL------------------YDKS 403
IK +++ +LI LL + KL+ + + + +
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETA 425
Query: 404 LEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHM 463
EV + M ++ I+PN + N I+ CR A+ D ++G+ N +Y +IH
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 464 ICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF---AKEQSNFEMVERL----FTRE 516
C S + A+ +ML+ P Y LISG ++ +VE+L F+ +
Sbjct: 486 CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD 545
Query: 517 M---NVACALF-------------QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 560
+ N+ LF +M + G P+ TY LI F K + ++ +
Sbjct: 546 LLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Query: 561 EMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
+M+ G+ P V TY +I Y G + E KLF +M
Sbjct: 606 QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 144/333 (43%), Gaps = 9/333 (2%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
+ + +N LI + LE A +V K ++ ++ + N ++ +
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 233 XXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
+ + G N+ TY ++ S ++ A K+ +G +P Y I GLC+
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 289 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 348
A ++V KL L+ +N +I FC + + E+L +M+ PD +Y
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITY 584
Query: 349 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYN 408
N L++ F K D + P++ Y ++I + D++L+++
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI----DAYCSVGELDEALKLFK 640
Query: 409 SM-LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 467
M L + + PNT+I N ++ + G F +AL+L E+ + + N +YN + + ++
Sbjct: 641 DMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEK 700
Query: 468 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 500
+ + L+LM M++++ P + L+ +
Sbjct: 701 TQGETLLKLMDEMVEQSCEPNQITMEILMERLS 733
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 133/322 (41%), Gaps = 29/322 (9%)
Query: 274 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL 333
T+V IR G V+ + + +L + NS N V+ + G V++A +VL
Sbjct: 151 TIVATKLLIRWFGRMGMVNQSVLVYERLDSNMK--NSQVRNVVVDVLLRNGLVDDAFKVL 208
Query: 334 EEM--KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ--IKPSIVNYTSLIL- 388
+EM K S P+ + +++L+ K+ + + P+ V T I
Sbjct: 209 DEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISS 268
Query: 389 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 448
LCKN + +D + + +++N N +L R L+ E
Sbjct: 269 LCKNA-RANTAWD----ILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEV 323
Query: 449 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPG------VVNYSTLISGFAKE 502
I + + +I+ +CK ALE+ +M + G ++++TLI G K
Sbjct: 324 KIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCK- 382
Query: 503 QSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM 562
V RL E + +E C+PN TY CLIDG+C+ ++ A ++ M
Sbjct: 383 ------VGRLKEAEELLVRMKLEER----CVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 563 KRKGIFPDVVTYTVLIAWYHKH 584
K I P+VVT ++ +H
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRH 454
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/399 (25%), Positives = 179/399 (44%), Gaps = 55/399 (13%)
Query: 247 YTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH 302
+ ++SC DI +++ K+ P VVT G I LC+ VD A ++ ++
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMR 356
Query: 303 CK------LHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMK-SSRTFPDVYSYNMLLNAF 355
K + +S FN +I G C+ G + EA E+L MK R P+ +YN L++ +
Sbjct: 357 GKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGY 416
Query: 356 CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LC----------------KNKLKGQQ 398
C+ G + +IKP++V +++ +C K +KG
Sbjct: 417 CRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNV 476
Query: 399 L--------------YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 444
+ +K++ Y ML+ P+ I ++ C+ + +A+ ++E
Sbjct: 477 VTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEK 536
Query: 445 FHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS 504
E G +L+ +YN +I + C ++ + E++ M K P + Y+TLIS F K +
Sbjct: 537 LKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHK- 595
Query: 505 NFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK- 563
+FE VER+ ++M G P + TY +ID +C + +D A +LF +M
Sbjct: 596 DFESVERMM-----------EQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 564 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
+ P+ V Y +LI + K G G+ L EMK +
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMV 683
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/397 (22%), Positives = 159/397 (40%), Gaps = 61/397 (15%)
Query: 262 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 321
++ + G +P V +I LC+ + A ++ L PL + FNA++
Sbjct: 246 LISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLG 305
Query: 322 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ------ 375
+ ++ +++ +M + PDV + +L+N CK V +
Sbjct: 306 RNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNV 365
Query: 376 IKPSIVNYTSLI--------------LLCKNKLKGQQL------------------YDKS 403
IK +++ +LI LL + KL+ + + + +
Sbjct: 366 IKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETA 425
Query: 404 LEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHM 463
EV + M ++ I+PN + N I+ CR A+ D ++G+ N +Y +IH
Sbjct: 426 KEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHA 485
Query: 464 ICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF---AKEQSNFEMVERL----FTRE 516
C S + A+ +ML+ P Y LISG ++ +VE+L F+ +
Sbjct: 486 CCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLD 545
Query: 517 M---NVACALF-------------QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 560
+ N+ LF +M + G P+ TY LI F K + ++ +
Sbjct: 546 LLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMME 605
Query: 561 EMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
+M+ G+ P V TY +I Y G + E KLF +M
Sbjct: 606 QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 137/315 (43%), Gaps = 9/315 (2%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
+ + +N LI + LE A +V K ++ ++ + N ++ +
Sbjct: 405 NAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFF 464
Query: 233 XXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
+ + G N+ TY ++ S ++ A K+ +G +P Y I GLC+
Sbjct: 465 MDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQV 524
Query: 289 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 348
A ++V KL L+ +N +I FC + + E+L +M+ PD +Y
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITY 584
Query: 349 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYN 408
N L++ F K D + P++ Y ++I + D++L+++
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI----DAYCSVGELDEALKLFK 640
Query: 409 SM-LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 467
M L + + PNT+I N ++ + G F +AL+L E+ + + N +YN + + ++
Sbjct: 641 DMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEK 700
Query: 468 SYPKMALELMPRMLK 482
+ + L+LM M++
Sbjct: 701 TQGETLLKLMDEMVE 715
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 9/231 (3%)
Query: 268 RSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRK-LHCKLHPLNSHCFNAVIHGFCQRGAV 326
+ G VVTY T I C V+ A K L P ++ + A+I G CQ
Sbjct: 469 KEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSP-DAKIYYALISGLCQVRRD 527
Query: 327 NEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSL 386
++A+ V+E++K D+ +YNML+ FC K + KP + Y +L
Sbjct: 528 HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTL 587
Query: 387 ILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED-- 444
I K K + ++ +E M ++ + P ++ +C G+ EAL L +D
Sbjct: 588 ISFF-GKHKDFESVERMME---QMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 445 FHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 495
H + +N N YN +I+ K AL L M + V P V Y+ L
Sbjct: 644 LHSK-VNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 133/322 (41%), Gaps = 29/322 (9%)
Query: 274 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL 333
T+V IR G V+ + + +L + NS N V+ + G V++A +VL
Sbjct: 151 TIVATKLLIRWFGRMGMVNQSVLVYERLDSNMK--NSQVRNVVVDVLLRNGLVDDAFKVL 208
Query: 334 EEM--KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ--IKPSIVNYTSLIL- 388
+EM K S P+ + +++L+ K+ + + P+ V T I
Sbjct: 209 DEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISS 268
Query: 389 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 448
LCKN + +D + + +++N N +L R L+ E
Sbjct: 269 LCKNA-RANTAWD----ILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEV 323
Query: 449 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPG------VVNYSTLISGFAKE 502
I + + +I+ +CK ALE+ +M + G ++++TLI G K
Sbjct: 324 KIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCK- 382
Query: 503 QSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM 562
V RL E + +E C+PN TY CLIDG+C+ ++ A ++ M
Sbjct: 383 ------VGRLKEAEELLVRMKLEER----CVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 563 KRKGIFPDVVTYTVLIAWYHKH 584
K I P+VVT ++ +H
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRH 454
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 138/286 (48%), Gaps = 22/286 (7%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
F +++G C G V +AL +++ M P Y ++N CK GD
Sbjct: 13 FTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKME 68
Query: 373 XCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 431
IK +V Y ++I LCK+ G ++ ++L + M I P+ I + ++ CR
Sbjct: 69 ETHIKAHVVIYNAIIDRLCKD---GHHIHAQNL--FTEMHDKGIFPDVITYSGMIDSFCR 123
Query: 432 EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 491
G++ +A LL D E+ IN + +++ +I+ + KE A E+ ML+R + P +
Sbjct: 124 SGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTIT 183
Query: 492 YSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 551
Y+++I GF K+ +N A + M+ C P++ T++ LI+G+CK
Sbjct: 184 YNSMIDGFCKQD------------RLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKR 231
Query: 552 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
+D ++F EM R+GI + VTYT LI + + G + L M
Sbjct: 232 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVM 277
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 146/315 (46%), Gaps = 22/315 (6%)
Query: 266 IYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGA 325
+ +G P VVT+ T + GLC G V A LV ++ + H + +I+G C+ G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGH----QPYGTIINGLCKMGD 56
Query: 326 VNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTS 385
AL +L +M+ + V YN +++ CK G I P ++ Y+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 386 LI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 444
+I C++ + + ++ M++ I P+ + + ++ +EG+ EA + D
Sbjct: 117 MIDSFCRSGR-----WTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGD 171
Query: 445 FHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS 504
+GI +YN +I CK+ A ++ M ++ P VV +STLI+G+ K
Sbjct: 172 MLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCK--- 228
Query: 505 NFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 564
+ ++ +F EM R G + N TYT LI GFC++ +D A L + M
Sbjct: 229 ---------AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMIS 279
Query: 565 KGIFPDVVTYTVLIA 579
G+ P+ +T+ ++A
Sbjct: 280 SGVAPNYITFQSMLA 294
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 119/255 (46%), Gaps = 20/255 (7%)
Query: 343 PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDK 402
PDV ++ L+N C +G V +P Y ++I N L +
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTII----NGLCKMGDTES 59
Query: 403 SLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIH 462
+L + + M + I+ + +I N I+ C++G A L + H++GI + +Y+ +I
Sbjct: 60 ALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMID 119
Query: 463 MICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACA 522
C+ A +L+ M++R + P VV +S LI+ KE E E
Sbjct: 120 SFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEE------------ 167
Query: 523 LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYH 582
++ +M R G P TY +IDGFCK D ++ A ++ D M K PDVVT++ LI Y
Sbjct: 168 IYGDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYC 227
Query: 583 KHGRIGEKNKLFGEM 597
K R+ ++F EM
Sbjct: 228 KAKRVDNGMEIFCEM 242
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 141/327 (43%), Gaps = 56/327 (17%)
Query: 235 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
++ETG P++ T+T +M+ G + A ++ ++ G P YGT I GLC+ G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 291 VDVAHKLVRKL---HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 347
+ A L+ K+ H K H + +NA+I C+ G A + EM FPDV +
Sbjct: 57 TESALNLLSKMEETHIKAHVV---IYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVIT 113
Query: 348 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVY 407
Y+ ++++FC+ G QI P +V +++LI N L + ++ E+Y
Sbjct: 114 YSGMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALI----NALVKEGKVSEAEEIY 169
Query: 408 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLE------------------------ 443
ML+ I P TI N ++ C++ + +A +L+
Sbjct: 170 GDMLRRGIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKA 229
Query: 444 -----------DFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 492
+ H +GI N +Y +IH C+ A +L+ M+ V P + +
Sbjct: 230 KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITF 289
Query: 493 STLISGFAKEQS---NFEMVERLFTRE 516
++++ ++ F ++E L E
Sbjct: 290 QSMLASLCSKKELRKAFAILEDLQKSE 316
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/353 (19%), Positives = 138/353 (39%), Gaps = 60/353 (16%)
Query: 115 VETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIV------------GYCKCDDSFEQ 162
VET G V F +++ G L+ AL+ +V G CK D+
Sbjct: 2 VET-GCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIINGLCKMGDTESA 60
Query: 163 FSTLLDLPH----HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKC 218
+ L + V+++N +I + HA +F + G+ + + + ++
Sbjct: 61 LNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDS 120
Query: 219 LXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPT 274
++E P++ T++ +++ G + A EI G + R G PT
Sbjct: 121 FCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 275 VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 334
+TY + I G C+ ++ A +++ + K + F+ +I+G+C+ V+ +E+
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 335 EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKL 394
EM + +Y L++ FC+ GD+
Sbjct: 241 EMHRRGIVANTVTYTTLIHGFCQVGDL--------------------------------- 267
Query: 395 KGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHE 447
D + ++ N M+ + + PN I +L C + + R+A +LED +
Sbjct: 268 ------DAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAILEDLQK 314
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/478 (23%), Positives = 206/478 (43%), Gaps = 29/478 (6%)
Query: 132 HTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLL-DLPHHSVLVFNVLIKVFASNSML 190
+F+ A H LR+ + K DD+F F +L P S++ F ++ V A +
Sbjct: 36 RSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKF 95
Query: 191 EHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIM 250
+ ++ +N+G+ + S L+ C +M+ G P+I T +
Sbjct: 96 DIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSL 155
Query: 251 MS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLH 306
++ C R A ++ + G P VV Y T I GLC+ ++ A ++ + K
Sbjct: 156 LNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGI 215
Query: 307 PLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXX 366
++ +N +I G G +A +L +M + P+V + L++ F K+G++
Sbjct: 216 RADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARN 275
Query: 367 XXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHI 425
+ P++ Y SLI C + G Y +++ M+ P+ + N +
Sbjct: 276 LYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKY-----MFDLMVSKGCFPDVVTYNTL 330
Query: 426 LRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV 485
+ C+ + + + L + QG+ + ++YN +IH C+ +A ++ RM+ V
Sbjct: 331 ITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 390
Query: 486 LPGVVNYSTLISGF---AKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCL 542
P +V Y+ L+ K + MVE L EM+V ++ TY +
Sbjct: 391 SPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDV---------------DIITYNII 435
Query: 543 IDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 600
I G C+ D + A LF + RKG+ PD + Y +I+ + G E +KL MK +
Sbjct: 436 IQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493
Score = 99.0 bits (245), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 170/401 (42%), Gaps = 36/401 (8%)
Query: 115 VETHGFSHSVNYFRIIIHTFAMA----------------GMHLEVFALLRDIVGYCKCDD 158
+E G SH + F I+IH F G + L + G+C+ +
Sbjct: 105 MENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQ-GN 163
Query: 159 SFEQFSTLLD-------LPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRS 211
F++ +L+D +P+ V+++N +I N L +A +VF + G+ +
Sbjct: 164 RFQEAVSLVDSMDGFGFVPN--VVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVT 221
Query: 212 CNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIY 267
N L+ L +++ PN+ +T ++ G++ A + ++
Sbjct: 222 YNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMI 281
Query: 268 RSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVN 327
R P V TY + I G C G + A + + K + +N +I GFC+ V
Sbjct: 282 RRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVE 341
Query: 328 EALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI 387
+ +++ EM D ++YN L++ +C+ G + C + P IV Y L+
Sbjct: 342 DGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILL 401
Query: 388 -LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFH 446
LC N G+ +K+L + + ++ + + I N I++ CR + +EA L
Sbjct: 402 DCLCNN---GK--IEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 456
Query: 447 EQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 487
+G+ + +Y +I +C++ + A +L RM + +P
Sbjct: 457 RKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMP 497
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 103/220 (46%), Gaps = 22/220 (10%)
Query: 400 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 459
+D + ++ MLQ+ P+ + +L V + +F + L GI+ + YS+
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 460 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNV 519
+IH C+ S +AL L+ +M+K P +V +L++GF Q N
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC--QGN----------RFQE 167
Query: 520 ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 579
A +L M G +PN+ Y +I+G CK ++ A ++F M++KGI D VTY LI+
Sbjct: 168 AVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLIS 227
Query: 580 WYHKHGRIGEKNKLFGEMKANCILLDDGIKKLQDPKLVQF 619
GR + + LL D +K+ DP ++ F
Sbjct: 228 GLSNSGRWTDAAR----------LLRDMVKRKIDPNVIFF 257
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 4/184 (2%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
V+ +N LI F + +E ++F GL + N L+
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 233 XXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
+++ G P+I TY I++ C G I A ++ + +S + ++TY I+GLC
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 289 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 348
+ A L R L K ++ + +I G C++G EA ++ MK P Y
Sbjct: 443 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIY 502
Query: 349 NMLL 352
+ L
Sbjct: 503 DETL 506
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 198/424 (46%), Gaps = 24/424 (5%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
++L+ N I VF + LE A + + VG+ ++ + N +++
Sbjct: 276 NLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELL 335
Query: 233 XXLMETGPLPNIHTYTIMMS--CGDIRLAA--EILGKIYRSGG-NPTVVTYGTYIRGLCE 287
+ G LP+ +Y +M C + R+ +++ K+ + G P VTY T I L +
Sbjct: 336 EDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTK 395
Query: 288 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKS-SRTFPDVY 346
+ D A ++ K ++ ++A++H C+ G ++EA +++ EM S PDV
Sbjct: 396 HDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVV 455
Query: 347 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLE 405
+Y ++N FC+ G+V KP+ V+YT+L+ +C+ G+ L ++ E
Sbjct: 456 TYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRT---GKSL--EARE 510
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
+ N ++ PN+I + I+ REG+ EA ++ + +G N ++ +C
Sbjct: 511 MMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLC 570
Query: 466 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQ 525
++ A + M L + VVN++T+I GF + E++ A ++
Sbjct: 571 RDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQND------------ELDAALSVLD 618
Query: 526 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
+M I +++TYT L+D K I AT+L +M KGI P VTY +I Y + G
Sbjct: 619 DMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMG 678
Query: 586 RIGE 589
++ +
Sbjct: 679 KVDD 682
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 135/329 (41%), Gaps = 61/329 (18%)
Query: 273 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 332
P VVTY + G C G VD A KL++ +H H N+ + A+++G C+ G EA E+
Sbjct: 452 PDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREM 511
Query: 333 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 392
+ + P+ +Y+++++ ++G +
Sbjct: 512 MNMSEEHWWSPNSITYSVIMHGLRREGKLS------------------------------ 541
Query: 393 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 452
++ +V M+ P + N +L+ CR+G+ EA +E+ +G +
Sbjct: 542 ---------EACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAI 592
Query: 453 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 512
N ++ +IH C+ AL ++ M N V Y+TL+ K+ E E
Sbjct: 593 NVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATE-- 650
Query: 513 FTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM----KRKGIF 568
L ++M G P TY +I +C++ +D + ++M K + I+
Sbjct: 651 ----------LMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIY 700
Query: 569 PDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
V+ ++ G++ E + L G++
Sbjct: 701 NQVIEKLCVL------GKLEEADTLLGKV 723
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 97/210 (46%), Gaps = 16/210 (7%)
Query: 395 KGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQ 454
+ QL D +L+V M + + PN +ICN + V R + +AL LE GI N
Sbjct: 254 RAGQLRD-ALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNV 312
Query: 455 YSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFT 514
+YN +I C + A+EL+ M + LP V+Y T++ KE+ E+ +
Sbjct: 313 VTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRD---- 368
Query: 515 REMNVACALFQEMSRI-GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVT 573
L ++M++ G +P+ TY LI K D+ D A + + KG D +
Sbjct: 369 --------LMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLG 420
Query: 574 YTVLIAWYHKHGRIGEKNKLFGEM--KANC 601
Y+ ++ K GR+ E L EM K +C
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMLSKGHC 450
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 106/252 (42%), Gaps = 10/252 (3%)
Query: 242 PNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 297
PN TY+++M G + A +++ ++ G P V ++ LC G A K
Sbjct: 522 PNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKF 581
Query: 298 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 357
+ + K +N F VIHGFCQ ++ AL VL++M DV++Y L++ K
Sbjct: 582 MEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGK 641
Query: 358 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 417
KG + I P+ V Y ++I ++ D + + M+ +
Sbjct: 642 KGRIAEATELMKKMLHKGIDPTPVTYRTVI----HRYCQMGKVDDLVAILEKMISR--QK 695
Query: 418 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
I N ++ C G+ EA TLL + + ++ K+ P A ++
Sbjct: 696 CRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVA 755
Query: 478 PRMLKRNVLPGV 489
RM RN++P V
Sbjct: 756 CRMFNRNLIPDV 767
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 92/212 (43%), Gaps = 27/212 (12%)
Query: 397 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 456
Q Y VY SML+ + T +C RV L L++ +GI +
Sbjct: 200 QWRYRHDPMVYYSMLE--VLSKTKLCQGSRRV----------LVLMK---RRGIYRTPEA 244
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRE 516
++ ++ + + AL+++ M + V P ++ +T I F +
Sbjct: 245 FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVR------------ANR 292
Query: 517 MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTV 576
+ A + M +G +PN+ TY C+I G+C + ++ A +L ++M KG PD V+Y
Sbjct: 293 LEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYT 352
Query: 577 LIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 608
++ + K RI E L +M L+ D +
Sbjct: 353 IMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQV 384
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 162/349 (46%), Gaps = 18/349 (5%)
Query: 256 IRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH-CKLHPLNSHCFN 314
R A + ++ G PTV + Y+ L G VD+A + R++ CK+ P N + N
Sbjct: 184 FRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISP-NPYTLN 242
Query: 315 AVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXC 374
V+ G+C+ G +++ +E+L++M+ SYN L+ C+KG +
Sbjct: 243 MVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKS 302
Query: 375 QIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQ 434
++P++V + +LI +K Q+ + +V+ M + PNT+ N ++ + ++G
Sbjct: 303 GLQPNVVTFNTLIHGFCRAMKLQE----ASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 435 FREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYST 494
A ED GI + +YN +I +CK++ + A + + + K N++P +S
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 495 LISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDL 554
LI G Q + +R F L++ M R GC PN T+ L+ FC+ + D
Sbjct: 419 LIMG----QCVRKNADRGF--------ELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 555 ATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 603
A+Q+ EM R+ I D T + G+ KL EM+ L
Sbjct: 467 ASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 171/422 (40%), Gaps = 41/422 (9%)
Query: 110 KFGSWVETHG-FSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLD 168
+F +W +T SHS+ I++HT ++LRD++ D + F LL
Sbjct: 100 EFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLY 159
Query: 169 LPHH---SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXX 225
+ VF+ L K FA +A F+ K+ G + SCN + L
Sbjct: 160 SYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRV 219
Query: 226 XXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTY 281
+ PN +T ++MS G + E+L + R G T V+Y T
Sbjct: 220 DIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTL 279
Query: 282 IRGLCECGYVDVAHKLVRKL-HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSR 340
I G CE G + A KL + L P N FN +IHGFC+ + EA +V EMK+
Sbjct: 280 IAGHCEKGLLSSALKLKNMMGKSGLQP-NVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338
Query: 341 TFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNK------ 393
P+ +YN L+N + ++GD I+ I+ Y +LI LCK
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAA 398
Query: 394 ---------------------LKGQ---QLYDKSLEVYNSMLQNAIRPNTIICNHILRVH 429
+ GQ + D+ E+Y SM+++ PN N ++
Sbjct: 399 QFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Query: 430 CREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGV 489
CR F A +L + + I L+ + +++ + + + ++ +L+ M + L
Sbjct: 459 CRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES 518
Query: 490 VN 491
N
Sbjct: 519 FN 520
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 133/293 (45%), Gaps = 18/293 (6%)
Query: 314 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 373
NA + +G V+ AL EM+ + P+ Y+ NM+++ +C+ G +
Sbjct: 207 NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER 266
Query: 374 CQIKPSIVNYTSLILL-CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 432
+ + V+Y +LI C+ KG L +L++ N M ++ ++PN + N ++ CR
Sbjct: 267 LGFRATDVSYNTLIAGHCE---KG--LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRA 321
Query: 433 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 492
+ +EA + + + N +YN +I+ ++ +MA M+ + ++ Y
Sbjct: 322 MKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTY 381
Query: 493 STLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 552
+ LI G K+ TR+ A +E+ + +PN T++ LI G C
Sbjct: 382 NALIFGLCKQAK---------TRK---AAQFVKELDKENLVPNSSTFSALIMGQCVRKNA 429
Query: 553 DLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
D +L+ M R G P+ T+ +L++ + ++ +++ EM I LD
Sbjct: 430 DRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLD 482
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 12/206 (5%)
Query: 400 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 459
+ + + + M P CN + +G+ AL + I+ N Y+ N
Sbjct: 184 FRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNM 243
Query: 460 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNV 519
++ C+ +EL+ M + V+Y+TLI+G ++ ++
Sbjct: 244 VMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL------------LSS 291
Query: 520 ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 579
A L M + G PN+ T+ LI GFC+ + A+++F EMK + P+ VTY LI
Sbjct: 292 ALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLIN 351
Query: 580 WYHKHGRIGEKNKLFGEMKANCILLD 605
Y + G + + +M N I D
Sbjct: 352 GYSQQGDHEMAFRFYEDMVCNGIQRD 377
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 12/166 (7%)
Query: 434 QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYS 493
+FR A + G S N + + + +AL M + + P +
Sbjct: 183 KFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLN 242
Query: 494 TLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 553
++SG+ + + +++ L Q+M R+G +Y LI G C+ +
Sbjct: 243 MVMSGYCR------------SGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 554 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 599
A +L + M + G+ P+VVT+ LI + + ++ E +K+FGEMKA
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 162/349 (46%), Gaps = 18/349 (5%)
Query: 256 IRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH-CKLHPLNSHCFN 314
R A + ++ G PTV + Y+ L G VD+A + R++ CK+ P N + N
Sbjct: 184 FRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISP-NPYTLN 242
Query: 315 AVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXC 374
V+ G+C+ G +++ +E+L++M+ SYN L+ C+KG +
Sbjct: 243 MVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKS 302
Query: 375 QIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQ 434
++P++V + +LI +K Q+ + +V+ M + PNT+ N ++ + ++G
Sbjct: 303 GLQPNVVTFNTLIHGFCRAMKLQE----ASKVFGEMKAVNVAPNTVTYNTLINGYSQQGD 358
Query: 435 FREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYST 494
A ED GI + +YN +I +CK++ + A + + + K N++P +S
Sbjct: 359 HEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSA 418
Query: 495 LISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDL 554
LI G Q + +R F L++ M R GC PN T+ L+ FC+ + D
Sbjct: 419 LIMG----QCVRKNADRGF--------ELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 555 ATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 603
A+Q+ EM R+ I D T + G+ KL EM+ L
Sbjct: 467 ASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFL 515
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 171/422 (40%), Gaps = 41/422 (9%)
Query: 110 KFGSWVETHG-FSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLD 168
+F +W +T SHS+ I++HT ++LRD++ D + F LL
Sbjct: 100 EFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLY 159
Query: 169 LPHH---SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXX 225
+ VF+ L K FA +A F+ K+ G + SCN + L
Sbjct: 160 SYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRV 219
Query: 226 XXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTY 281
+ PN +T ++MS G + E+L + R G T V+Y T
Sbjct: 220 DIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTL 279
Query: 282 IRGLCECGYVDVAHKLVRKL-HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSR 340
I G CE G + A KL + L P N FN +IHGFC+ + EA +V EMK+
Sbjct: 280 IAGHCEKGLLSSALKLKNMMGKSGLQP-NVVTFNTLIHGFCRAMKLQEASKVFGEMKAVN 338
Query: 341 TFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNK------ 393
P+ +YN L+N + ++GD I+ I+ Y +LI LCK
Sbjct: 339 VAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAA 398
Query: 394 ---------------------LKGQ---QLYDKSLEVYNSMLQNAIRPNTIICNHILRVH 429
+ GQ + D+ E+Y SM+++ PN N ++
Sbjct: 399 QFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAF 458
Query: 430 CREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGV 489
CR F A +L + + I L+ + +++ + + + ++ +L+ M + L
Sbjct: 459 CRNEDFDGASQVLREMVRRSIPLDSRTVHQVCNGLKHQGKDQLVKKLLQEMEGKKFLQES 518
Query: 490 VN 491
N
Sbjct: 519 FN 520
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 133/293 (45%), Gaps = 18/293 (6%)
Query: 314 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 373
NA + +G V+ AL EM+ + P+ Y+ NM+++ +C+ G +
Sbjct: 207 NAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMER 266
Query: 374 CQIKPSIVNYTSLILL-CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 432
+ + V+Y +LI C+ KG L +L++ N M ++ ++PN + N ++ CR
Sbjct: 267 LGFRATDVSYNTLIAGHCE---KG--LLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRA 321
Query: 433 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 492
+ +EA + + + N +YN +I+ ++ +MA M+ + ++ Y
Sbjct: 322 MKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTY 381
Query: 493 STLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 552
+ LI G K+ TR+ A +E+ + +PN T++ LI G C
Sbjct: 382 NALIFGLCKQAK---------TRK---AAQFVKELDKENLVPNSSTFSALIMGQCVRKNA 429
Query: 553 DLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
D +L+ M R G P+ T+ +L++ + ++ +++ EM I LD
Sbjct: 430 DRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLD 482
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 12/206 (5%)
Query: 400 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 459
+ + + + M P CN + +G+ AL + I+ N Y+ N
Sbjct: 184 FRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNM 243
Query: 460 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNV 519
++ C+ +EL+ M + V+Y+TLI+G ++ ++
Sbjct: 244 VMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGL------------LSS 291
Query: 520 ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 579
A L M + G PN+ T+ LI GFC+ + A+++F EMK + P+ VTY LI
Sbjct: 292 ALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLIN 351
Query: 580 WYHKHGRIGEKNKLFGEMKANCILLD 605
Y + G + + +M N I D
Sbjct: 352 GYSQQGDHEMAFRFYEDMVCNGIQRD 377
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 74/166 (44%), Gaps = 12/166 (7%)
Query: 434 QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYS 493
+FR A + G S N + + + +AL M + + P +
Sbjct: 183 KFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLN 242
Query: 494 TLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 553
++SG+ + + +++ L Q+M R+G +Y LI G C+ +
Sbjct: 243 MVMSGYCR------------SGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 554 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 599
A +L + M + G+ P+VVT+ LI + + ++ E +K+FGEMKA
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKA 336
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/516 (22%), Positives = 213/516 (41%), Gaps = 63/516 (12%)
Query: 138 GMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSV----LVFNVLIKVFASNSMLEHA 193
G+ + V A + GYCK ++ + + + ++F+V+++ F N +E A
Sbjct: 340 GIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKA 399
Query: 194 HQVFVSAKNV------------------------GLEL----------HIRSCN--FLLK 217
+ ++ K+V LE+ H CN FLL
Sbjct: 400 IEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLF 459
Query: 218 CLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNP 273
C + + G PN+ Y MM ++ LA I ++ G P
Sbjct: 460 C--KQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEP 517
Query: 274 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL 333
TY I G + A ++ +++ N +N +I+G C+ G ++A E+L
Sbjct: 518 NNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEML 577
Query: 334 EEM-KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 392
+ + K R SYN +++ F K GD P++V +TSLI N
Sbjct: 578 QNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLI----N 633
Query: 393 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 452
D +LE+ + M ++ + ++ C++ + A TL + E G+
Sbjct: 634 GFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMP 693
Query: 453 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 512
N YN +I A++L +M+ + + Y+T+I G K+ +
Sbjct: 694 NVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGN-------- 745
Query: 513 FTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
+N+A L+ E+ +G +P+ + L++G K A+++ +EMK+K + P+V+
Sbjct: 746 ----INLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVL 801
Query: 573 TYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 608
Y+ +IA +H+ G + E +L EM I+ DD +
Sbjct: 802 LYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTV 837
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 174/407 (42%), Gaps = 65/407 (15%)
Query: 259 AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLH-PLNSHCFNAVI 317
A +I ++ G P + + ++ C+ + +A L+R++ KL P + + +VI
Sbjct: 258 AVKIFRRVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVI 317
Query: 318 HGFCQRGAVNEALEVLEEM--------------------------KSSRTF--------- 342
F + G + EA+ V++EM K+ F
Sbjct: 318 VAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLA 377
Query: 343 PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDK 402
PD +++++ FCK ++ +I PS V ++I C LK + +
Sbjct: 378 PDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGC---LKAES-PEA 433
Query: 403 SLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIH 462
+LE++N ++ I + +CN I + C++G+ A + L+ ++GI N YN ++
Sbjct: 434 ALEIFNDSFESWI-AHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMML 492
Query: 463 MICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ--------------SNFEM 508
C+ +A + ML++ + P YS LI GF K + SNFE
Sbjct: 493 AHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEA 552
Query: 509 VERLFTREMNVACALFQEMSRIGCLPNL----------YTYTCLIDGFCKIDYIDLATQL 558
E ++ +N C + Q L NL +Y +IDGF K+ D A +
Sbjct: 553 NEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVET 612
Query: 559 FDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
+ EM G P+VVT+T LI + K R+ ++ EMK+ + LD
Sbjct: 613 YREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLD 659
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/352 (22%), Positives = 162/352 (46%), Gaps = 25/352 (7%)
Query: 235 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
++E G PN TY+I++ D + A +++ ++ S V Y T I GLC+ G
Sbjct: 510 MLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQ 569
Query: 291 VDVAHKLVRKL-HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 349
A ++++ L K + ++ +N++I GF + G + A+E EM + P+V ++
Sbjct: 570 TSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFT 629
Query: 350 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLEVY 407
L+N FCK + ++K + Y +LI KN +K + ++
Sbjct: 630 SLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMK------TAYTLF 683
Query: 408 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 467
+ + + + PN + N ++ G+ A+ L + GI+ + ++Y +I + K+
Sbjct: 684 SELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKD 743
Query: 468 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEM 527
+A +L +L ++P + + L++G +K+ + A + +EM
Sbjct: 744 GNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLK------------ASKMLEEM 791
Query: 528 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 579
+ PN+ Y+ +I G + ++ A +L DEM KGI D + +L++
Sbjct: 792 KKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVS 843
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 120/264 (45%), Gaps = 4/264 (1%)
Query: 254 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 313
GD A E ++ +G +P VVT+ + I G C+ +D+A ++ ++ L+ +
Sbjct: 604 GDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAY 663
Query: 314 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 373
A+I GFC++ + A + E+ P+V YN L++ F G +
Sbjct: 664 GALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVN 723
Query: 374 CQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREG 433
I + YT++I + L + + ++Y+ +L I P+ I+ ++ ++G
Sbjct: 724 DGISCDLFTYTTMI----DGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKG 779
Query: 434 QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYS 493
QF +A +LE+ ++ + N Y+ +I +E A L ML++ ++ ++
Sbjct: 780 QFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFN 839
Query: 494 TLISGFAKEQSNFEMVERLFTREM 517
L+SG ++ + L + EM
Sbjct: 840 LLVSGRVEKPPAASKISSLASPEM 863
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 116/254 (45%), Gaps = 17/254 (6%)
Query: 347 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEV 406
++N LLNA+ + + ++ P V Y + +L + L L D++ E+
Sbjct: 171 AFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVP-FVPYVNNVL---SSLVRSNLIDEAKEI 226
Query: 407 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 466
YN M+ + + + ++R RE + EA+ + +G + ++ + CK
Sbjct: 227 YNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACK 286
Query: 467 ESYPKMALELMPRMLKRNVLPGVV-NYSTLISGFAKEQSNFEMVERLFTREMNVACALFQ 525
MAL+L+ M + +P Y+++I F KE + M A +
Sbjct: 287 TPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGN------------MEEAVRVMD 334
Query: 526 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
EM G ++ T L++G+CK + + A LF+ M+ +G+ PD V ++V++ W+ K+
Sbjct: 335 EMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNM 394
Query: 586 RIGEKNKLFGEMKA 599
+ + + + MK+
Sbjct: 395 EMEKAIEFYMRMKS 408
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/413 (20%), Positives = 164/413 (39%), Gaps = 66/413 (15%)
Query: 199 SAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNI----HTYTIMMSCG 254
S+K G EL R+ N+LL +++ +P + + + ++
Sbjct: 159 SSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSN 218
Query: 255 DIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFN 314
I A EI K+ G VT +R + A K+ R++ + + F+
Sbjct: 219 LIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFS 278
Query: 315 AVIHGFCQRGAVNEALEVLEEMKSSRTFP-DVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 373
+ C+ + AL++L EM+ P +Y ++ AF K+G++
Sbjct: 279 LAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNM------------ 326
Query: 374 CQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREG 433
++++ V + M+ I + I ++ +C+
Sbjct: 327 ---------------------------EEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGN 359
Query: 434 QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYS 493
+ +AL L E+G+ ++ ++ ++ CK + A+E RM + P V
Sbjct: 360 ELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVH 419
Query: 494 TLISGFAKEQS----------NFE-------MVERLF-----TREMNVACALFQEMSRIG 531
T+I G K +S +FE M ++F +++ A + + M + G
Sbjct: 420 TMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKG 479
Query: 532 CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 584
PN+ Y ++ C++ +DLA +F EM KG+ P+ TY++LI + K+
Sbjct: 480 IEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKN 532
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 91/222 (40%), Gaps = 18/222 (8%)
Query: 150 IVGYCKCDD---------SFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSA 200
I G+CK + + LDLP + LI F + ++ A+ +F
Sbjct: 632 INGFCKSNRMDLALEMTHEMKSMELKLDLP-----AYGALIDGFCKKNDMKTAYTLFSEL 686
Query: 201 KNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDI 256
+GL ++ N L+ ++ G ++ TYT M+ G+I
Sbjct: 687 PELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNI 746
Query: 257 RLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAV 316
LA+++ ++ G P + + + GL + G A K++ ++ K N ++ V
Sbjct: 747 NLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTV 806
Query: 317 IHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
I G + G +NEA + +EM D +N+L++ +K
Sbjct: 807 IAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSGRVEK 848
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 173/434 (39%), Gaps = 83/434 (19%)
Query: 236 MET-GPLPNIHTYTI----MMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
MET G PN++T+TI + G I A EIL ++ G P VVTY I LC
Sbjct: 249 METLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
+D A ++ K+ H + + ++ F ++ + EM+ PDV ++ +
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQ----------- 397
L++A CK G+ I P++ Y +LI LL ++L
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLG 428
Query: 398 ------------QLYDKS------LEVYNSMLQNAIRPNTIICNH--------------- 424
Y KS LE + M I PN + CN
Sbjct: 429 VKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAK 488
Query: 425 --------------------ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
+++ + + G+ EA+ LL + E G + N +I+ +
Sbjct: 489 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTL 548
Query: 465 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALF 524
K A ++ RM + + P VV Y+TL++G K E +E LF
Sbjct: 549 YKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE------------LF 596
Query: 525 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 584
+ M + GC PN T+ L D CK D + LA ++ +M G PDV TY +I K+
Sbjct: 597 EGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKN 656
Query: 585 GRIGEKNKLFGEMK 598
G++ E F +MK
Sbjct: 657 GQVKEAMCFFHQMK 670
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 130/535 (24%), Positives = 217/535 (40%), Gaps = 64/535 (11%)
Query: 100 SLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALL---RD------- 149
S N + K+F S +E G V F I++ AG E F L RD
Sbjct: 339 SDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNL 398
Query: 150 ------IVGYCKC---DDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVS 199
I G + DD+ E F + L + + V I + + A + F
Sbjct: 399 HTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEK 458
Query: 200 AKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GD 255
K G+ +I +CN L L L + G +P+ TY +MM C G+
Sbjct: 459 MKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGE 518
Query: 256 IRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL-VRKLHCKLHPLNSHCFN 314
I A ++L ++ +G P V+ + I L + VD A K+ +R KL P +N
Sbjct: 519 IDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKP-TVVTYN 577
Query: 315 AVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXC 374
++ G + G + EA+E+ E M P+ ++N L + CK +V
Sbjct: 578 TLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDM 637
Query: 375 QIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREG 433
P + Y ++I L KN GQ K + ++ + P+ + +L +
Sbjct: 638 GCVPDVFTYNTIIFGLVKN---GQV---KEAMCFFHQMKKLVYPDFVTLCTLLPGVVKAS 691
Query: 434 QFREALTLLEDF----HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKR------ 483
+A ++ +F +Q NL + ++I I E+ A+ R++
Sbjct: 692 LIEDAYKIITNFLYNCADQPANL---FWEDLIGSILAEAGIDNAVSFSERLVANGICRDG 748
Query: 484 -NVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCL 542
++L ++ YS + + ++ FE FT+++ V P L TY L
Sbjct: 749 DSILVPIIRYSCKHNNVSGARTLFEK----FTKDLGVQ-------------PKLPTYNLL 791
Query: 543 IDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
I G + D I++A +F ++K G PDV TY L+ Y K G+I E +L+ EM
Sbjct: 792 IGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/460 (22%), Positives = 185/460 (40%), Gaps = 24/460 (5%)
Query: 148 RDIVGYCKCDDSFEQFSTL---LDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVG 204
R + + D SF F ++ L+L H + N +++ + LE VF +
Sbjct: 90 RGLKSFPDTDSSFSYFKSVAGNLNLVH-TTETCNYMLEALRVDGKLEEMAYVFDLMQKRI 148
Query: 205 LELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYT----IMMSCGDIRLAA 260
++ + + K L + E G + N ++Y +++ A
Sbjct: 149 IKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAM 208
Query: 261 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 320
E+ ++ G P++ TY + + GL + +D L++++ N + F I
Sbjct: 209 EVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVL 268
Query: 321 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 380
+ G +NEA E+L+ M PDV +Y +L++A C + + KP
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDR 328
Query: 381 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 440
V Y +L+ ++ + D + ++ M ++ P+ + ++ C+ G F EA
Sbjct: 329 VTYITLL----DRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFD 384
Query: 441 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 500
L+ +QGI N ++YN +I + + ALEL M V P Y I +
Sbjct: 385 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG 444
Query: 501 KEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 560
K + +E F++M G PN+ + K A Q+F
Sbjct: 445 KSGDSVSALET------------FEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFY 492
Query: 561 EMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 600
+K G+ PD VTY +++ Y K G I E KL EM N
Sbjct: 493 GLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMEN 532
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 120/289 (41%), Gaps = 52/289 (17%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
+N +I G + + A +V ++KS+ PDV +YN LL+A+ K G +
Sbjct: 788 YNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKI----------- 836
Query: 373 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 432
D+ E+Y M + NTI N ++ +
Sbjct: 837 ----------------------------DELFELYKEMSTHECEANTITHNIVISGLVKA 868
Query: 433 GQFREALTLLEDF-HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 491
G +AL L D ++ + +Y +I + K A +L ML P
Sbjct: 869 GNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAI 928
Query: 492 YSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 551
Y+ LI+GF K E + ACALF+ M + G P+L TY+ L+D C +
Sbjct: 929 YNILINGFGK------------AGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976
Query: 552 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 600
+D F E+K G+ PDVV Y ++I K R+ E LF EMK +
Sbjct: 977 VDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTS 1025
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/319 (22%), Positives = 140/319 (43%), Gaps = 18/319 (5%)
Query: 270 GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEA 329
G P + TY I GL E +++A + ++ + +N ++ + + G ++E
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 330 LEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ-IKPSIVNYTSLIL 388
E+ +EM + + ++N++++ K G+V + P+ Y LI
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI- 898
Query: 389 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 448
K +LY+ +++ ML RPN I N ++ + G+ A L + ++
Sbjct: 899 --DGLSKSGRLYEAK-QLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE 955
Query: 449 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEM 508
G+ + +Y+ ++ +C L + + + P VV Y+ +I+G K
Sbjct: 956 GVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGK------- 1008
Query: 509 VERLFTREMNVACALFQEM-SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 567
+ + A LF EM + G P+LYTY LI ++ A ++++E++R G+
Sbjct: 1009 -----SHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL 1063
Query: 568 FPDVVTYTVLIAWYHKHGR 586
P+V T+ LI Y G+
Sbjct: 1064 EPNVFTFNALIRGYSLSGK 1082
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 146/347 (42%), Gaps = 22/347 (6%)
Query: 237 ETGPLPNIHTYTIM----MSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 292
+ G P + TY ++ + I +A ++ ++ +G P V TY + + G +D
Sbjct: 778 DLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKID 837
Query: 293 VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF-PDVYSYNML 351
+L +++ N+ N VI G + G V++AL++ ++ S R F P +Y L
Sbjct: 838 ELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPL 897
Query: 352 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML 411
++ K G + +P+ Y LI N D + ++ M+
Sbjct: 898 IDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILI----NGFGKAGEADAACALFKRMV 953
Query: 412 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 471
+ +RP+ + ++ C G+ E L ++ E G+N + YN II+ + K +
Sbjct: 954 KEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLE 1013
Query: 472 MALELMPRM-LKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI 530
AL L M R + P + Y++LI MVE A ++ E+ R
Sbjct: 1014 EALVLFNEMKTSRGITPDLYTYNSLILNLGIAG----MVEE--------AGKIYNEIQRA 1061
Query: 531 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 577
G PN++T+ LI G+ + A ++ M G P+ TY L
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 130/318 (40%), Gaps = 29/318 (9%)
Query: 309 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 368
+++ + + +G + +A L +M+ + YSYN L++ K
Sbjct: 152 DTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY 211
Query: 369 XXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRV 428
+PS+ Y+SL++ L ++ D + + M ++PN +RV
Sbjct: 212 RRMILEGFRPSLQTYSSLMV----GLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRV 267
Query: 429 HCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPG 488
R G+ EA +L+ ++G + +Y +I +C A E+ +M P
Sbjct: 268 LGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPD 327
Query: 489 VVNYSTLISGFAKEQSNFEMVERL---------------FTREMNVACAL--FQE----- 526
V Y TL+ F+ + + + V++ FT ++ C F E
Sbjct: 328 RVTYITLLDRFS-DNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTL 386
Query: 527 --MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 584
M G LPNL+TY LI G ++ +D A +LF M+ G+ P TY V I +Y K
Sbjct: 387 DVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKS 446
Query: 585 GRIGEKNKLFGEMKANCI 602
G + F +MK I
Sbjct: 447 GDSVSALETFEKMKTKGI 464
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 103/256 (40%), Gaps = 58/256 (22%)
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
V++ M + I+ +T I + +G ++A L E G LN YSYN +IH++
Sbjct: 140 VFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLL 199
Query: 466 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS--------------------- 504
K + A+E+ RM+ P + YS+L+ G K +
Sbjct: 200 KSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVY 259
Query: 505 NFEMVERLFTR--EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD-- 560
F + R+ R ++N A + + M GC P++ TYT LID C +D A ++F+
Sbjct: 260 TFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKM 319
Query: 561 ---------------------------------EMKRKGIFPDVVTYTVLIAWYHKHGRI 587
EM++ G PDVVT+T+L+ K G
Sbjct: 320 KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNF 379
Query: 588 GEKNKLFGEMKANCIL 603
GE M+ IL
Sbjct: 380 GEAFDTLDVMRDQGIL 395
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 135/343 (39%), Gaps = 13/343 (3%)
Query: 160 FEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCL 219
FE+F+ L + + +N+LI M+E A VF+ K+ G + + NFLL
Sbjct: 772 FEKFTKDLGV-QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAY 830
Query: 220 XXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGG-NPT 274
+ N T+ I++S G++ A ++ + +PT
Sbjct: 831 GKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 890
Query: 275 VVTYGTYIRGLCECGYVDVAHKLVRK-LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL 333
TYG I GL + G + A +L L P N +N +I+GF + G + A +
Sbjct: 891 ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRP-NCAIYNILINGFGKAGEADAACALF 949
Query: 334 EEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNK 393
+ M PD+ +Y++L++ C G V + P +V Y +I N
Sbjct: 950 KRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLII----NG 1005
Query: 394 LKGQQLYDKSLEVYNSM-LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 452
L +++L ++N M I P+ N ++ G EA + + G+
Sbjct: 1006 LGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEP 1065
Query: 453 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 495
N +++N +I P+ A + M+ P Y L
Sbjct: 1066 NVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 104/456 (22%), Positives = 185/456 (40%), Gaps = 59/456 (12%)
Query: 150 IVGYCKCDDSFEQFSTLLDLPHHSVL----VFNVLIKVFASNSMLEHAHQVFVSAKNVGL 205
I GYCK D + +L + F +I F + ++ K GL
Sbjct: 247 IGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGL 306
Query: 206 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--C--GDIRLAAE 261
+ + N ++ ++ P++ TY I+++ C G +A
Sbjct: 307 RVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVG 366
Query: 262 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 321
L + + G P ++Y I+ C+ D+A KL+ ++ + + + +IHG
Sbjct: 367 FLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLV 426
Query: 322 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 381
G +++A+ + ++ PD YNML++ CK G + P+ +
Sbjct: 427 VSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTG---------------RFLPAKL 471
Query: 382 NYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 441
+++ ML I P+ + ++ R G F EA +
Sbjct: 472 ------------------------LFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKV 507
Query: 442 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 501
E+G+ ++ +N +I C+ AL M RM + +++P YST+I G+ K
Sbjct: 508 FSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVK 567
Query: 502 EQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE 561
+Q +M A +F+ M + C PN+ TYT LI+GFC +A + F E
Sbjct: 568 QQ------------DMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKE 615
Query: 562 MKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
M+ + + P+VVTYT LI K EK + E+
Sbjct: 616 MQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWEL 651
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 103/455 (22%), Positives = 192/455 (42%), Gaps = 35/455 (7%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
V+ N L+ + + L A +V+ + G + S L+K +
Sbjct: 169 DVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLI 228
Query: 233 XXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
G +PNI Y ++ GDI A + ++ G PT+ T+GT I G C+
Sbjct: 229 EGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKE 288
Query: 289 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 348
G + +L+ ++ + ++ N +I + G + E + + ++ PDV +Y
Sbjct: 289 GDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATY 348
Query: 349 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVY 407
N+L+N CK+G + P+ ++Y LI CK+K YD + ++
Sbjct: 349 NILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKE-----YDIASKLL 403
Query: 408 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 467
M + +P+ + ++ G +A+ + ++G++ + YN ++ +CK
Sbjct: 404 LQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKT 463
Query: 468 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRE----------- 516
A L ML RN+LP Y+TLI GF + +F+ ++F+
Sbjct: 464 GRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIR-SGDFDEARKVFSLSVEKGVKVDVVH 522
Query: 517 -------------MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 563
++ A A M+ +P+ +TY+ +IDG+ K + A ++F M+
Sbjct: 523 HNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYME 582
Query: 564 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
+ P+VVTYT LI + G + F EM+
Sbjct: 583 KNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQ 617
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 163/402 (40%), Gaps = 45/402 (11%)
Query: 237 ETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 292
+ G +PN +Y ++ + +A+++L ++ G P +VTYG I GL G++D
Sbjct: 373 KKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD 432
Query: 293 VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLL 352
A + KL + ++ +N ++ G C+ G A + EM PD Y Y L+
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLI 492
Query: 353 NAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSML 411
+ F + GD +K +V++ ++I C++ + D++L N M
Sbjct: 493 DGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRS-----GMLDEALACMNRMN 547
Query: 412 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 471
+ + P+ + I+ + ++ A+ + + N +Y +I+ C + K
Sbjct: 548 EEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFK 607
Query: 472 MALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIG 531
MA E M R+++P VV Y+TLI AKE S E A ++ M
Sbjct: 608 MAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEK-----------AVYYWELMMTNK 656
Query: 532 CLPNLYTYTCLIDGFCKI--------------DYIDLATQLFDEMKRKGIFPDVVTYTVL 577
C+PN T+ CL+ GF K L ++ F MK G Y
Sbjct: 657 CVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSA 716
Query: 578 IAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKLQDPKLVQF 619
+ HG + K C+ D +KK P V F
Sbjct: 717 LVCLCVHGMV----------KTACMFQDKMVKKGFSPDPVSF 748
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 161/373 (43%), Gaps = 37/373 (9%)
Query: 274 TVVTYGT--YIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE 331
+V Y T ++G+C G V+V KL+ K N +N +I G+C+ G + A
Sbjct: 202 SVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYL 261
Query: 332 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 391
V +E+K P + ++ ++N FCK+GD ++ S+ ++I
Sbjct: 262 VFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNII---D 318
Query: 392 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 451
K + D + E ++ N +P+ N ++ C+EG+ A+ L++ ++G+
Sbjct: 319 AKYRHGYKVDPA-ESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLI 377
Query: 452 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLI-----SGFAKEQSNF 506
N SY +I CK +A +L+ +M +R P +V Y LI SG + N
Sbjct: 378 PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNM 437
Query: 507 E--MVER-------LFTREMNVACA---------LFQEMSRIGCLPNLYTYTCLIDGFCK 548
+ +++R ++ M+ C LF EM LP+ Y Y LIDGF +
Sbjct: 438 KVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIR 497
Query: 549 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD--- 605
D A ++F KG+ DVV + +I + + G + E M ++ D
Sbjct: 498 SGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFT 557
Query: 606 -----DGIKKLQD 613
DG K QD
Sbjct: 558 YSTIIDGYVKQQD 570
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/372 (19%), Positives = 150/372 (40%), Gaps = 25/372 (6%)
Query: 150 IVGYCKCDDSFEQFSTLLDLPHH----SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGL 205
I YCK + LL + ++ + +LI + ++ A + V + G+
Sbjct: 387 IQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGV 446
Query: 206 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLAAE 261
N L+ L +++ LP+ + Y ++ GD A +
Sbjct: 447 SPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARK 506
Query: 262 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 321
+ G VV + I+G C G +D A + +++ + + ++ +I G+
Sbjct: 507 VFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYV 566
Query: 322 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 381
++ + A+++ M+ ++ P+V +Y L+N FC +GD + P++V
Sbjct: 567 KQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVV 626
Query: 382 NYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR---------- 431
YT+LI ++ K +K++ + M+ N PN + N +L+ +
Sbjct: 627 TYTTLI---RSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEP 683
Query: 432 EGQFREALTLLEDF----HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 487
+G +L +F G + + +YN + +C K A +M+K+ P
Sbjct: 684 DGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSP 743
Query: 488 GVVNYSTLISGF 499
V+++ ++ GF
Sbjct: 744 DPVSFAAILHGF 755
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/204 (21%), Positives = 87/204 (42%), Gaps = 53/204 (25%)
Query: 395 KGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQ 454
K ++YD +E+Y+S+ P+ I CN +L + + + +A + ++ ++G +++
Sbjct: 152 KAVEIYDYVVELYDSV------PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDN 205
Query: 455 YSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFT 514
YS ++ +C E K + +++E +
Sbjct: 206 YSTCILVKGMCNE--------------------------------GKVEVGRKLIEGRWG 233
Query: 515 REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTY 574
+ GC+PN+ Y +I G+CK+ I+ A +F E+K KG P + T+
Sbjct: 234 K---------------GCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETF 278
Query: 575 TVLIAWYHKHGRIGEKNKLFGEMK 598
+I + K G ++L E+K
Sbjct: 279 GTMINGFCKEGDFVASDRLLSEVK 302
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 138/290 (47%), Gaps = 15/290 (5%)
Query: 314 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 373
+A+I + G V A + E + VY+++ L++A+ + G
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 374 CQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREG 433
++P++V Y ++I C KG + + + ++ M +N ++P+ I N +L V R G
Sbjct: 297 YGLRPNLVTYNAVIDACG---KGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGG 353
Query: 434 QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYS 493
+ A L ++ + I + +SYN ++ ICK +A E++ +M + ++P VV+YS
Sbjct: 354 LWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYS 413
Query: 494 TLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 553
T+I GFAK + A LF EM +G + +Y L+ + K+ +
Sbjct: 414 TVIDGFAK------------AGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSE 461
Query: 554 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 603
A + EM GI DVVTY L+ Y K G+ E K+F EMK +L
Sbjct: 462 EALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVL 511
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 149/349 (42%), Gaps = 60/349 (17%)
Query: 259 AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLH----PLNSHCFN 314
A + + G P +VTY I CG + K V K ++ + FN
Sbjct: 287 AISVFNSMKEYGLRPNLVTYNAVIDA---CGKGGMEFKQVAKFFDEMQRNGVQPDRITFN 343
Query: 315 AVIHGFCQRGAVNEALEVL-EEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 373
+++ C RG + EA L +EM + R DV+SYN LL+A CK G +
Sbjct: 344 SLL-AVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQM------------ 390
Query: 374 CQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREG 433
D + E+ M I PN + + ++ + G
Sbjct: 391 ---------------------------DLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAG 423
Query: 434 QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYS 493
+F EAL L + GI L++ SYN ++ + K + AL+++ M + VV Y+
Sbjct: 424 RFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYN 483
Query: 494 TLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 553
L+ G+ K Q ++ V+++FT EM R LPNL TY+ LIDG+ K
Sbjct: 484 ALLGGYGK-QGKYDEVKKVFT-----------EMKREHVLPNLLTYSTLIDGYSKGGLYK 531
Query: 554 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
A ++F E K G+ DVV Y+ LI K+G +G L EM I
Sbjct: 532 EAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGI 580
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/427 (22%), Positives = 182/427 (42%), Gaps = 30/427 (7%)
Query: 172 HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLK-CLXXXXXXXXXXX 230
++V F+ LI + + + E A VF S K GL ++ + N ++ C
Sbjct: 266 NTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK 325
Query: 231 XXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLC 286
+ G P+ T+ +++ G A + ++ V +Y T + +C
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAIC 385
Query: 287 ECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 346
+ G +D+A +++ ++ K N ++ VI GF + G +EAL + EM+ D
Sbjct: 386 KGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRV 445
Query: 347 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEV 406
SYN LL+ + K G IK +V Y +L+ Q YD+ +V
Sbjct: 446 SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALL----GGYGKQGKYDEVKKV 501
Query: 407 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 466
+ M + + PN + + ++ + + G ++EA+ + +F G+ + Y+ +I +CK
Sbjct: 502 FTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK 561
Query: 467 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS---------------NFEMVER 511
A+ L+ M K + P VV Y+++I F + + + +
Sbjct: 562 NGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSA 621
Query: 512 LFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 571
L E N LF +++ N T C +G ++ I ++F +M + I P+V
Sbjct: 622 LTETEGNRVIQLFGQLTTESN--NRTTKDCE-EGMQELSCI---LEVFRKMHQLEIKPNV 675
Query: 572 VTYTVLI 578
VT++ ++
Sbjct: 676 VTFSAIL 682
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 14/190 (7%)
Query: 418 NTIIC-NHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP-KMALE 475
NT+ + ++ + R G EA+++ E G+ N +YN +I K K +
Sbjct: 266 NTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAK 325
Query: 476 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPN 535
M + V P + +++L++ + R E A LF EM+ +
Sbjct: 326 FFDEMQRNGVQPDRITFNSLLA----------VCSRGGLWE--AARNLFDEMTNRRIEQD 373
Query: 536 LYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFG 595
+++Y L+D CK +DLA ++ +M K I P+VV+Y+ +I + K GR E LFG
Sbjct: 374 VFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFG 433
Query: 596 EMKANCILLD 605
EM+ I LD
Sbjct: 434 EMRYLGIALD 443
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 164/358 (45%), Gaps = 22/358 (6%)
Query: 272 NPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE 331
+P VVTY T+I C+ G + +A K + N F +I G+C+ G + A+
Sbjct: 160 SPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 332 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 391
+ +EM+ R +V +Y L++ FCKKG++ +++P+ + YT++I
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTII---- 275
Query: 392 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 451
+ + D +++ ML +R + I+ C G+ +EA ++ED + +
Sbjct: 276 DGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLV 335
Query: 452 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV-- 509
+ + +++ K K A+ + ++++R P VV ST+I G AK E +
Sbjct: 336 PDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVY 395
Query: 510 -------ERLFTREMNVACA---------LFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 553
+ ++T ++ C LF ++S G +P+ + YT I G CK +
Sbjct: 396 FCIEKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLV 455
Query: 554 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKL 611
A +L M ++G+ D++ YT LI G + E ++F EM + I D + L
Sbjct: 456 DAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGISPDSAVFDL 513
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 106/435 (24%), Positives = 191/435 (43%), Gaps = 73/435 (16%)
Query: 235 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
L+ G P+ ++ ++S G ++ A +I+ + R G P V++Y + I G C G
Sbjct: 47 LVSRGYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGD 106
Query: 291 VDVAHKLVRKLH------CKLHPLNSHCFNAVIHG------------------------- 319
+ A ++ L CK ++ FN++ +G
Sbjct: 107 IRSASLVLESLRASHGFICKPDIVS---FNSLFNGFSKMKMLDEVFVYMGVMLKCCSPNV 163
Query: 320 ---------FCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXX 370
FC+ G + AL+ MK P+V ++ L++ +CK GD+
Sbjct: 164 VTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKE 223
Query: 371 XXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVH 429
++ ++V YT+LI CK KG+ ++ E+Y+ M+++ + PN+++ I+
Sbjct: 224 MRRVRMSLNVVTYTALIDGFCK---KGEM--QRAEEMYSRMVEDRVEPNSLVYTTIIDGF 278
Query: 430 CREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGV 489
+ G A+ L QG+ L+ +Y II +C K A E++ M K +++P +
Sbjct: 279 FQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDM 338
Query: 490 VNYSTLI-----SGFAKEQSNF--EMVERLFTREMNVACALFQEMSRIGCL--------- 533
V ++T++ SG K N +++ER F ++ + +++ G L
Sbjct: 339 VIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCI 398
Query: 534 --PNLYTYTCLIDGFCKI-DYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 590
N YT LID CK D+I++ +LF ++ G+ PD YT IA K G + +
Sbjct: 399 EKANDVMYTVLIDALCKEGDFIEV-ERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDA 457
Query: 591 NKLFGEMKANCILLD 605
KL M +LLD
Sbjct: 458 FKLKTRMVQEGLLLD 472
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/372 (22%), Positives = 159/372 (42%), Gaps = 59/372 (15%)
Query: 256 IRLAAEILGKIYRSGGNPTVVTYGTYIRGL--CECGYVDVAHKLVRKLHCKLHPLNSHCF 313
+R A + L ++ +S P T +I L CG + + K + L + + + F
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSL--KFLAYLVSRGYTPHRSSF 59
Query: 314 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 373
N+V+ C+ G V A +++ M PDV SYN L++ C+ GD+
Sbjct: 60 NSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRA 119
Query: 374 CQ---IKPSIVNYTSLILLCKNKLKGQQLYDK---------------------------- 402
KP IV++ SL N ++ D+
Sbjct: 120 SHGFICKPDIVSFNSLF----NGFSKMKMLDEVFVYMGVMLKCCSPNVVTYSTWIDTFCK 175
Query: 403 ------SLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 456
+L+ ++SM ++A+ PN + ++ +C+ G A++L ++ ++LN +
Sbjct: 176 SGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVT 235
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTR- 515
Y +I CK+ + A E+ RM++ V P + Y+T+I GF F R
Sbjct: 236 YTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGF-------------FQRG 282
Query: 516 EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYT 575
+ + A +M G ++ Y +I G C + AT++ ++M++ + PD+V +T
Sbjct: 283 DSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFT 342
Query: 576 VLIAWYHKHGRI 587
++ Y K GR+
Sbjct: 343 TMMNAYFKSGRM 354
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/419 (23%), Positives = 177/419 (42%), Gaps = 25/419 (5%)
Query: 157 DDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLL 216
D+ F +L +V+ ++ I F + L+ A + F S K L ++ + L+
Sbjct: 146 DEVFVYMGVMLKCCSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLI 205
Query: 217 KCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGN 272
+ N+ TYT ++ G+++ A E+ ++
Sbjct: 206 DGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVE 265
Query: 273 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 332
P + Y T I G + G D A K + K+ + L+ + +I G C G + EA E+
Sbjct: 266 PNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEI 325
Query: 333 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 392
+E+M+ S PD+ + ++NA+ K G + +P +V +++I
Sbjct: 326 VEDMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMI---DG 382
Query: 393 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 452
K QL++ VY + + N ++ ++ C+EG F E L E G+
Sbjct: 383 IAKNGQLHEAI--VYFCIE----KANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVP 436
Query: 453 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 512
+++ Y I +CK+ A +L RM++ +L ++ Y+TLI G A S MVE
Sbjct: 437 DKFMYTSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLA---SKGLMVE-- 491
Query: 513 FTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 571
A +F EM G P+ + LI + K + A+ L +M+R+G+ V
Sbjct: 492 -------ARQVFDEMLNSGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAV 543
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 123/280 (43%), Gaps = 30/280 (10%)
Query: 326 VNEALEVLEEMKSSRTFPDVYSYN----MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 381
V EAL+ L ++ S PD ++ N L+N+ C P
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCG----ILSLKFLAYLVSRGYTPHRS 57
Query: 382 NYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 440
++ S++ +CK GQ + + ++ +SM + P+ I N ++ HCR G R A
Sbjct: 58 SFNSVVSFVCK---LGQVKFAE--DIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSASL 112
Query: 441 LLEDF---HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 497
+LE H + S+N + + K M MLK P VV YST I
Sbjct: 113 VLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLK-CCSPNVVTYSTWID 171
Query: 498 GFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 557
F K + E+ +A F M R PN+ T+TCLIDG+CK +++A
Sbjct: 172 TFCK------------SGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVS 219
Query: 558 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
L+ EM+R + +VVTYT LI + K G + +++ M
Sbjct: 220 LYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRM 259
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 119/509 (23%), Positives = 211/509 (41%), Gaps = 74/509 (14%)
Query: 111 FGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRD--IVGYCKCDDSF-------- 160
F S ++ F H+ F ++I AM G V LL+ + G+ +D F
Sbjct: 63 FKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYR 122
Query: 161 ---------EQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIR 210
E F + + SV ++N ++ + ++ + V+ K G E ++
Sbjct: 123 QVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVF 182
Query: 211 SCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSG 270
+ N LLK L + A ++L ++ G
Sbjct: 183 TYNVLLKALCKN-------------------------------NKVDGAKKLLVEMSNKG 211
Query: 271 GNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEAL 330
P V+Y T I +CE G V K R+L + P+ S +NA+I+G C+ A
Sbjct: 212 CCPDAVSYTTVISSMCEVGLV----KEGRELAERFEPVVS-VYNALINGLCKEHDYKGAF 266
Query: 331 EVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLC 390
E++ EM P+V SY+ L+N C G + P+I +SL+ C
Sbjct: 267 ELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGC 326
Query: 391 KNKLKGQQLYDKSLEVYNSMLQN-AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQG 449
L+G +L+++N M++ ++PN + N +++ C G +A+++ E G
Sbjct: 327 --FLRGTTF--DALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG 382
Query: 450 INLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV 509
+ N +Y +I+ K A+ + +ML P VV Y+ ++ + S F+
Sbjct: 383 CSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCR-HSKFKEA 441
Query: 510 ERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK-GIF 568
E +L + MS+ C P++ T+ I G C +D A ++F +M+++
Sbjct: 442 E-----------SLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490
Query: 569 PDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
P++VTY L+ K RI E L E+
Sbjct: 491 PNIVTYNELLDGLAKANRIEEAYGLTREI 519
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 162/360 (45%), Gaps = 23/360 (6%)
Query: 244 IHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHC 303
I ++ G A E+ +I G +P+V Y + L + + + + R +
Sbjct: 115 ISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKR 174
Query: 304 KLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXX 363
N +N ++ C+ V+ A ++L EM + PD SY ++++ C+ G V
Sbjct: 175 DGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKE 234
Query: 364 XXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICN 423
+ +P + Y +LI N L + Y + E+ M++ I PN I +
Sbjct: 235 GRELAE-----RFEPVVSVYNALI----NGLCKEHDYKGAFELMREMVEKGISPNVISYS 285
Query: 424 HILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKR 483
++ V C GQ A + L ++G + N Y+ + ++ AL+L +M++
Sbjct: 286 TLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRG 345
Query: 484 -NVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCL 542
+ P VV Y+TL+ GF S+ +V+ A ++F M IGC PN+ TY L
Sbjct: 346 FGLQPNVVAYNTLVQGFC---SHGNIVK---------AVSVFSHMEEIGCSPNIRTYGSL 393
Query: 543 IDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM-KANC 601
I+GF K +D A ++++M G P+VV YT ++ +H + E L M K NC
Sbjct: 394 INGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 118/610 (19%), Positives = 237/610 (38%), Gaps = 127/610 (20%)
Query: 91 FHVVVRVIKSLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDI 150
F V++R + +++ ++ + ++ GF S + F +I + G+ + I
Sbjct: 79 FEVMIRKL-AMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRI 137
Query: 151 VGYCKCDDSFEQFSTLLDLP---------------------HHSVLVFNVLIKVFASNSM 189
+ CD S + ++ +LD +V +NVL+K N+
Sbjct: 138 KEF-GCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNK 196
Query: 190 LEHAHQVFVSAKNVG------------------------------LELHIRSCNFLLKCL 219
++ A ++ V N G E + N L+ L
Sbjct: 197 VDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGL 256
Query: 220 XXXXXXXXXXXXXXXLMETGPLPNIHTYT----IMMSCGDIRLAAEILGKIYRSGGNPTV 275
++E G PN+ +Y+ ++ + G I LA L ++ + G +P +
Sbjct: 257 CKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNI 316
Query: 276 VTYGTYIRGLCECGY----VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE 331
T + ++G G +D+ ++++R L P N +N ++ GFC G + +A+
Sbjct: 317 YTLSSLVKGCFLRGTTFDALDLWNQMIRGF--GLQP-NVVAYNTLVQGFCSHGNIVKAVS 373
Query: 332 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLC 390
V M+ P++ +Y L+N F K+G + P++V YT+++ LC
Sbjct: 374 VFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALC 433
Query: 391 KN----------KLKGQQLYDKSLEVYNSML---------------------QNAIRPNT 419
++ ++ ++ S+ +N+ + Q+ PN
Sbjct: 434 RHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNI 493
Query: 420 IICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPR 479
+ N +L + + EA L + +G+ + +YN ++H C P +AL+L+ +
Sbjct: 494 VTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGK 553
Query: 480 MLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTY 539
M+ P + + +I + K Q E ++ V+C R P++ +Y
Sbjct: 554 MMVDGKSPDEITMNMIILAYCK-QGKAERAAQMLDL---VSCG------RRKWRPDVISY 603
Query: 540 TCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 599
T +I G C+ + + L + M GI P + T++VLI
Sbjct: 604 TNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI--------------------- 642
Query: 600 NCILLDDGIK 609
NC +LDD ++
Sbjct: 643 NCFILDDIVR 652
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/304 (21%), Positives = 126/304 (41%), Gaps = 47/304 (15%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
+V+ +N L++ F S+ + A VF + +G +IR+ L+
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIW 410
Query: 233 XXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
++ +G PN+ YT M+ + A ++ + + P+V T+ +I+GLC+
Sbjct: 411 NKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDA 470
Query: 289 GYVDVAHK------------------------------------LVRKLHCKLHPLNSHC 312
G +D A K L R++ + +S
Sbjct: 471 GRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSST 530
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
+N ++HG C G AL+++ +M PD + NM++ A+CK+G
Sbjct: 531 YNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVS 590
Query: 373 XCQIK--PSIVNYTSLIL-LCKNKLK--GQQLYDK--SLEVYNSMLQNAIRPNTIICNHI 425
+ K P +++YT++I LC++ + G L ++ S + S+ ++ N I + I
Sbjct: 591 CGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFILDDI 650
Query: 426 LRVH 429
+R H
Sbjct: 651 VRAH 654
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/477 (22%), Positives = 194/477 (40%), Gaps = 78/477 (16%)
Query: 119 GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGY---CKCDDSFEQFSTLLDLPHHSVL 175
GF+H+ + + I+ + A V +L+ D+ KC ++
Sbjct: 78 GFTHNYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGEN---------------- 121
Query: 176 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 235
+F L++ + E + ++F+ + G++ +RS N LL L
Sbjct: 122 LFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNS 181
Query: 236 MET-GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
E+ G PNI T +++ DI A ++L +I G P +VTY T
Sbjct: 182 KESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTT---------- 231
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
++ G+ RG + A VLEEM +PD +Y +
Sbjct: 232 -------------------------ILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTV 266
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNS 409
L++ +CK G +I+P+ V Y +I LCK K G+ + +++
Sbjct: 267 LMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGE-----ARNMFDE 321
Query: 410 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 469
ML+ + P++ +C ++ C + + EA L + + + +IH +CKE
Sbjct: 322 MLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGR 381
Query: 470 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSR 529
A +L ++ +P ++ Y+TLI+G ++ E+ A L+ +M
Sbjct: 382 VTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKG------------ELTEAGRLWDDMYE 428
Query: 530 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 586
C PN +TY LI+G K + ++ +EM G FP+ T+ +L K G+
Sbjct: 429 RKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGK 485
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 100/210 (47%), Gaps = 13/210 (6%)
Query: 400 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ-GINLNQYSYN 458
Y+ S+ ++ + ++ + N +L V + +F + ++ E GI N ++ N
Sbjct: 136 YESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCN 195
Query: 459 EIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMN 518
++ +CK++ + A +++ + ++P +V Y+T++ G+ +M
Sbjct: 196 LLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARG------------DME 243
Query: 519 VACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 578
A + +EM G P+ TYT L+DG+CK+ A + D+M++ I P+ VTY V+I
Sbjct: 244 SAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMI 303
Query: 579 AWYHKHGRIGEKNKLFGEMKANCILLDDGI 608
K + GE +F EM + D +
Sbjct: 304 RALCKEKKSGEARNMFDEMLERSFMPDSSL 333
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 150/339 (44%), Gaps = 30/339 (8%)
Query: 262 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 321
I K+ G +P V I C+ G + A L+R ++ +++ +N VI G C
Sbjct: 116 IYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRN---RVISIDTVTYNTVISGLC 172
Query: 322 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 381
+ G +EA + L EM PD SYN L++ FCK G+ ++V
Sbjct: 173 EHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRA-------------KALV 219
Query: 382 NYTSLILLCKNKLKGQQLYDKSL--EVYNSMLQNAIRPNTIICNHILRVHCREGQFREAL 439
+ S + L + + Y+ E Y M+ + P+ + + I+ C+ G+ E
Sbjct: 220 DEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGG 279
Query: 440 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 499
LL + E + N +Y ++ + K + + AL L +M+ R + +V Y+ L+ G
Sbjct: 280 LLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGL 339
Query: 500 AKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLF 559
K ++ A F+ + +PN+ TYT L+DG CK + A +
Sbjct: 340 FK------------AGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFII 387
Query: 560 DEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
+M K + P+VVTY+ +I Y K G + E L +M+
Sbjct: 388 TQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKME 426
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 116/548 (21%), Positives = 206/548 (37%), Gaps = 78/548 (14%)
Query: 119 GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFN 178
GF V F II+ G LE LLR++ E+ S P+H + +
Sbjct: 254 GFDPDVVTFSSIINRLCKGGKVLEGGLLLREM----------EEMSVY---PNH--VTYT 298
Query: 179 VLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMET 238
L+ ++ HA ++ G+ + + L+ L L+E
Sbjct: 299 TLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLED 358
Query: 239 GPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
+PN+ TYT ++ GD+ A I+ ++ P VVTY + I G + G ++ A
Sbjct: 359 NQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEA 418
Query: 295 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 354
L+RK+ + N + VI G + G A+E+ +EM+ + Y + L+N
Sbjct: 419 VSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNH 478
Query: 355 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--------------------------- 387
+ G + + +NYTSLI
Sbjct: 479 LKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWD 538
Query: 388 -----LLCKNKLK-GQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 441
+L LK G+ D + Y M + I P+ N ++ ++G L L
Sbjct: 539 VVSYNVLISGMLKFGKVGADWA---YKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKL 595
Query: 442 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 501
+ GI + S N ++ M+C+ + A+ ++ +M+ + P + Y + +K
Sbjct: 596 WDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSK 655
Query: 502 EQSN---FEMVERLFTREMNV--------------------ACALFQEMSRIGCLPNLYT 538
+ F+ E L + + + A + +M G +P+ T
Sbjct: 656 HKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVT 715
Query: 539 YTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
+ L+ G+ ++ A + M GI P+V TY +I G I E +K EMK
Sbjct: 716 FNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMK 775
Query: 599 ANCILLDD 606
+ + DD
Sbjct: 776 SRGMRPDD 783
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 129/303 (42%), Gaps = 25/303 (8%)
Query: 307 PLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXX 366
P + +N +I G + G V A + M+ PD+ ++N+++N+ K+GD
Sbjct: 536 PWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILK 594
Query: 367 XXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHI 425
C IKPS+++ ++ +LC+N G+ ++++ + N M+ I PN
Sbjct: 595 LWDKMKSCGIKPSLMSCNIVVGMLCEN---GKM--EEAIHILNQMMLMEIHPNLTTYRIF 649
Query: 426 LRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV 485
L + + E GI L++ YN +I +CK K A +M M R
Sbjct: 650 LDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGF 709
Query: 486 LPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDG 545
+P V +++L+ G+ + A + + M G PN+ TY +I G
Sbjct: 710 IPDTVTFNSLMHGY------------FVGSHVRKALSTYSVMMEAGISPNVATYNTIIRG 757
Query: 546 FCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
I + EMK +G+ PD TY LI+ K G + G M C ++
Sbjct: 758 LSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGNMK------GSMTIYCEMIA 811
Query: 606 DGI 608
DG+
Sbjct: 812 DGL 814
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/474 (22%), Positives = 198/474 (41%), Gaps = 45/474 (9%)
Query: 119 GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFN 178
G S V ++IH+F G +LLR+ V + +N
Sbjct: 124 GVSPDVFALNVLIHSFCKVGRLSFAISLLRNRV------------------ISIDTVTYN 165
Query: 179 VLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMET 238
+I + + + A+Q +G+ S N L+ + E
Sbjct: 166 TVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISEL 225
Query: 239 GPLPNIHTYTIMMSC-GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 297
N+ T+TI++S ++ E + SG +P VVT+ + I LC+ G V L
Sbjct: 226 ----NLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLL 281
Query: 298 VRKL-HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 356
+R++ ++P N + ++ + AL + +M D+ Y +L++
Sbjct: 282 LREMEEMSVYP-NHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLF 340
Query: 357 KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCK-NKLKGQQLYDKSLEVYNSMLQNA 414
K GD+ P++V YT+L+ LCK L + + ML+ +
Sbjct: 341 KAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEF------IITQMLEKS 394
Query: 415 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 474
+ PN + + ++ + ++G EA++LL +Q + N ++Y +I + K +MA+
Sbjct: 395 VIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAI 454
Query: 475 ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLP 534
EL M L GV + ++ ++ + + R+ +E+ L ++M G
Sbjct: 455 ELSKEMR----LIGVEENNYILDALV---NHLKRIGRI--KEVK---GLVKDMVSKGVTL 502
Query: 535 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIG 588
+ YT LID F K + A +EM+ +G+ DVV+Y VLI+ K G++G
Sbjct: 503 DQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVG 556
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 148/325 (45%), Gaps = 21/325 (6%)
Query: 275 VVTYGTYIRGLCECGYV--DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 332
VV+Y I G+ + G V D A+K +R+ + P + FN +++ ++G L++
Sbjct: 539 VVSYNVLISGMLKFGKVGADWAYKGMREKG--IEP-DIATFNIMMNSQRKQGDSEGILKL 595
Query: 333 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 392
++MKS P + S N+++ C+ G + +I P++ Y + L +
Sbjct: 596 WDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTY-RIFLDTSS 654
Query: 393 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 452
K K D + + ++L I+ + + N ++ C+ G ++A ++ D +G
Sbjct: 655 KHKRA---DAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIP 711
Query: 453 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 512
+ ++N ++H S+ + AL M++ + P V Y+T+I G +
Sbjct: 712 DTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAG--------- 762
Query: 513 FTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
+E++ EM G P+ +TY LI G KI + + ++ EM G+ P
Sbjct: 763 LIKEVD---KWLSEMKSRGMRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTS 819
Query: 573 TYTVLIAWYHKHGRIGEKNKLFGEM 597
TY VLI+ + G++ + +L EM
Sbjct: 820 TYNVLISEFANVGKMLQARELLKEM 844
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 146/369 (39%), Gaps = 35/369 (9%)
Query: 235 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
+ E G P+I T+ IMM+ GD ++ K+ G P++++ + LCE G
Sbjct: 564 MREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGK 623
Query: 291 VDVA-HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 349
++ A H L + + ++HP N + + + + + E + S YN
Sbjct: 624 MEEAIHILNQMMLMEIHP-NLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYN 682
Query: 350 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNS 409
L+ CK G P V + SL+ G + K+L Y+
Sbjct: 683 TLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLM---HGYFVGSHV-RKALSTYSV 738
Query: 410 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 469
M++ I PN N I+R G +E L + +G+ + ++YN +I K
Sbjct: 739 MMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGN 798
Query: 470 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSR 529
K ++ + M+ ++P Y+ LIS FA +M A L +EM +
Sbjct: 799 MKGSMTIYCEMIADGLVPKTSTYNVLISEFAN------------VGKMLQARELLKEMGK 846
Query: 530 IGCLPNLYTYTCLIDGFCKI------------DYIDLATQLFDEM-KRKGIFPDVVTYTV 576
G PN TY +I G CK+ Y+ A L EM + KG P T
Sbjct: 847 RGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVEEKGYIPCNQTIYW 906
Query: 577 LIAWYHKHG 585
+ A + K G
Sbjct: 907 ISAAFSKPG 915
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 138/316 (43%), Gaps = 44/316 (13%)
Query: 309 NSHCFNAVIHGFCQRGAVNEALEVL-EEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 367
+S +N++IH F G V++ + ++ +M + PDV++ N+L+++FCK G +
Sbjct: 92 DSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL 151
Query: 368 XXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHIL 426
I V Y ++I LC++ L D++ + + M++ I P+T+ N ++
Sbjct: 152 LRNRV---ISIDTVTYNTVISGLCEHGLA-----DEAYQFLSEMVKMGILPDTVSYNTLI 203
Query: 427 RVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM-ALELMPR-MLKRN 484
C+ G F A L+++ E N I H I SY + A+E R M+
Sbjct: 204 DGFCKVGNFVRAKALVDEISE---------LNLITHTILLSSYYNLHAIEEAYRDMVMSG 254
Query: 485 VLPGVVNYSTLISGFAKEQSNFE----------------------MVERLFTREM-NVAC 521
P VV +S++I+ K E +V+ LF + A
Sbjct: 255 FDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHAL 314
Query: 522 ALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWY 581
AL+ +M G +L YT L+DG K + A + F + P+VVTYT L+
Sbjct: 315 ALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGL 374
Query: 582 HKHGRIGEKNKLFGEM 597
K G + + +M
Sbjct: 375 CKAGDLSSAEFIITQM 390
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 120/300 (40%), Gaps = 14/300 (4%)
Query: 174 VLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXX 233
+ FN+++ E +++ K+ G++ + SCN ++ L
Sbjct: 573 IATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILN 632
Query: 234 XLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRS----GGNPTVVTYGTYIRGLCECG 289
+M PN+ TY I + A+ + K + + G + Y T I LC+ G
Sbjct: 633 QMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLG 692
Query: 290 YVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 349
A ++ + + ++ FN+++HG+ V +AL M + P+V +YN
Sbjct: 693 MTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVATYN 752
Query: 350 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDK---SLEV 406
++ G + ++P Y +LI GQ S+ +
Sbjct: 753 TIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALI-------SGQAKIGNMKGSMTI 805
Query: 407 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 466
Y M+ + + P T N ++ G+ +A LL++ ++G++ N +Y +I +CK
Sbjct: 806 YCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCTMISGLCK 865
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 122 bits (307), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 113/511 (22%), Positives = 212/511 (41%), Gaps = 83/511 (16%)
Query: 111 FGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDL- 169
F ++ HG S +VN + ++ G+ +++ ++L +++ + E+ T++DL
Sbjct: 76 FLRQLKEHGVSPNVNAYATLVRILTTWGLDIKLDSVLVELI------KNEERGFTVMDLI 129
Query: 170 ---------PHHSVLVFNV---LIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLK 217
S ++ V L+K + S M + A V +K + + I++CNFL+
Sbjct: 130 EVIGEQAEEKKRSFVLIRVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMN 189
Query: 218 CLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNP 273
+ L + G N +TY I++ G++ AA +L + N
Sbjct: 190 RMTEFGKIGMLMTLFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIE------NE 243
Query: 274 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSH---CFNAVIHGFCQRGAVNEAL 330
+V Y T+I GLC G + A L+ +L + + V+ GFC + A
Sbjct: 244 SVFGYKTFINGLCVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAE 303
Query: 331 EVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLC 390
V+ EM+ DVY+ +++ +CK ++
Sbjct: 304 SVIIEMEEIGFGLDVYACLAVIDRYCKNMNL----------------------------- 334
Query: 391 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 450
++L + ML ++ N +I + IL+ +C+ EAL ++F + I
Sbjct: 335 ----------PEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNI 384
Query: 451 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 510
L++ YN + K + A EL+ M R ++P V+NY+TLI G+ + +
Sbjct: 385 FLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVD--- 441
Query: 511 RLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPD 570
A L EM G P+L TY L+ G + + + ++++ MK +G P+
Sbjct: 442 ---------ALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPN 492
Query: 571 VVTYTVLIAWYHKHGRIGEKNKLFGEMKANC 601
VT +V+I ++ E F ++ C
Sbjct: 493 AVTNSVIIEGLCFARKVKEAEDFFSSLEQKC 523
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 151/340 (44%), Gaps = 59/340 (17%)
Query: 308 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 367
L+ C+N + G V EA E+L+EMK PDV +Y L++ +C +G V
Sbjct: 386 LDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDL 445
Query: 368 XXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHIL 426
+ P ++ Y L+ L +N G + ++ LE+Y M +PN + + I+
Sbjct: 446 IDEMIGNGMSPDLITYNVLVSGLARN---GHE--EEVLEIYERMKAEGPKPNAVTNSVII 500
Query: 427 RVHCREGQFREA---------------LTLLEDFHEQGINLNQYS-------------YN 458
C + +EA + ++ + E G++ Y Y
Sbjct: 501 EGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYI 560
Query: 459 EIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMN 518
++ +C E Y + A +++ +M V PG +I F K + RE
Sbjct: 561 KLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNN---------VREAQ 611
Query: 519 VACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 578
V LF M G +P+L+TYT +I +C+++ + A LF++MK++GI PDVVTYTVL+
Sbjct: 612 V---LFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLL 668
Query: 579 AWYHK-----------HGRIGEK--NKLFGEMKANCILLD 605
Y K G +G++ +++ E A I LD
Sbjct: 669 DRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLD 708
Score = 106 bits (264), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/367 (23%), Positives = 152/367 (41%), Gaps = 25/367 (6%)
Query: 246 TYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKL 305
+ + G + A E+L ++ G P V+ Y T I G C G V A L+ ++
Sbjct: 394 AFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNG 453
Query: 306 HPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC--KKGDVXX 363
+ +N ++ G + G E LE+ E MK+ P+ + ++++ C +K
Sbjct: 454 MSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAE 513
Query: 364 XXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG----------------------QQLYD 401
+ K S V L K K + +
Sbjct: 514 DFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLE 573
Query: 402 KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEII 461
K+ +V M + P +C ++ C+ REA L + E+G+ + ++Y +I
Sbjct: 574 KAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMI 633
Query: 462 HMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK-EQSNFEMVERLFTREMNVA 520
H C+ + + A L M +R + P VV Y+ L+ + K + + E A
Sbjct: 634 HTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKA 693
Query: 521 CALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAW 580
+ +E S G ++ YT LID CK++ ++ A +LFD M G+ PD+V YT LI+
Sbjct: 694 SEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISS 753
Query: 581 YHKHGRI 587
Y + G I
Sbjct: 754 YFRKGYI 760
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 152/349 (43%), Gaps = 22/349 (6%)
Query: 235 LMETGPLPNIHTYTIMMSCGDIRL-----AAEILGKIYRSGGNPTVVTYGTYIRGLCECG 289
+ E G N+ TY++M++ G ++L A + + + G P V+ Y I C G
Sbjct: 510 MKEEGVKHNLKTYSMMIN-GFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMG 568
Query: 290 YVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 349
+D A + V+++ H + F +IHG+ + G + +LEV + M+ P V+++N
Sbjct: 569 NMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFN 628
Query: 350 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNS 409
L+N +K + + + YT ++ K+ E +
Sbjct: 629 GLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIM----QGYASVGDTGKAFEYFTR 684
Query: 410 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 469
+ + + +L+ C+ G+ + AL + ++ + I N + YN +I +
Sbjct: 685 LQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGD 744
Query: 470 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSR 529
A +L+ +M K V P + Y++ IS +K +MN A +EM
Sbjct: 745 VWEAADLIQQMKKEGVKPDIHTYTSFISACSK------------AGDMNRATQTIEEMEA 792
Query: 530 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 578
+G PN+ TYT LI G+ + + A ++EMK GI PD Y L+
Sbjct: 793 LGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 120/582 (20%), Positives = 225/582 (38%), Gaps = 61/582 (10%)
Query: 70 HANSEFNLSSVSPVPETNRELFHVVVRVIKSLNWKIAREKKFGSWVETHGFSHSVNYFRI 129
H E + S+ + +TN + + V+ + ++ K +R +FG V+ +G ++ R
Sbjct: 273 HQEREGSRKSLQRILDTNGDNWQAVISAFEKIS-KPSR-TEFGLMVKFYGRRGDMHRARE 330
Query: 130 IIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHH----SVLVFNVLIKVFA 185
G+ I Y D E S + + S++ ++V++ F+
Sbjct: 331 TFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFS 390
Query: 186 SNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIH 245
E A F AK + L+ ++ + E G I
Sbjct: 391 KAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIA 450
Query: 246 TYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVR-- 299
Y MM D + + ++ G PTVVTYG I + G + A ++ R
Sbjct: 451 IYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVM 510
Query: 300 KLHCKLHPLNSHC---------------------------------FNAVIHGFCQRGAV 326
K H L ++ +N +I FC G +
Sbjct: 511 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNM 570
Query: 327 NEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSL 386
+ A++ ++EM+ R P ++ +++ + K GD+ C P++ + L
Sbjct: 571 DRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGL 630
Query: 387 ILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFH 446
I N L ++ +K++E+ + M + N I++ + G +A
Sbjct: 631 I----NGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQ 686
Query: 447 EQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNF 506
+G++++ ++Y ++ CK + AL + M RN+ Y+ LI G+A+ +
Sbjct: 687 NEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVW 746
Query: 507 EMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKG 566
E A L Q+M + G P+++TYT I K ++ ATQ +EM+ G
Sbjct: 747 E------------AADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALG 794
Query: 567 IFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 608
+ P++ TYT LI + + + + EMKA I D +
Sbjct: 795 VKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAV 836
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 90/224 (40%), Gaps = 29/224 (12%)
Query: 409 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 468
S + +P+ +++ + R G A E +GI Y +IH
Sbjct: 299 SAFEKISKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGR 358
Query: 469 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAK----EQSN--FEMVERLF--------- 513
AL + +M + + +V YS ++ GF+K E ++ F+ +R+
Sbjct: 359 DMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYG 418
Query: 514 --------TREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK 565
T M A AL +EM G + Y ++DG+ + +F +K
Sbjct: 419 KIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKEC 478
Query: 566 GIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIK 609
G P VVTY LI Y K G+I + ++ + ++ ++G+K
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKA------LEVSRVMKEEGVK 516
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 164/359 (45%), Gaps = 39/359 (10%)
Query: 273 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 332
P +VTY T + LC+ G VD LVR+L + + ++ IHG+ + GA+ +AL
Sbjct: 205 PNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQ 264
Query: 333 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCK 391
EM DV SY++L++ K+G+V ++P+++ YT++I LCK
Sbjct: 265 DREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCK 324
Query: 392 -NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 450
KL +++ ++N +L I + + ++ CR+G A ++L D ++GI
Sbjct: 325 MGKL------EEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGI 378
Query: 451 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 510
+ +YN +I+ +C A E + + V+ V+ YSTL+ + K Q N + V
Sbjct: 379 QPSILTYNTVINGLCMAGRVSEADE-----VSKGVVGDVITYSTLLDSYIKVQ-NIDAVL 432
Query: 511 RLFTREMNV------------------------ACALFQEMSRIGCLPNLYTYTCLIDGF 546
+ R + A AL++ M + P+ TY +I G+
Sbjct: 433 EIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGY 492
Query: 547 CKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
CK I+ A ++F+E+ RK V Y +I K G + ++ E+ + LD
Sbjct: 493 CKTGQIEEALEMFNEL-RKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLD 550
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 123/525 (23%), Positives = 211/525 (40%), Gaps = 83/525 (15%)
Query: 115 VETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSV 174
+E G S+ + +I+ MAG E + + +VG +STLLD
Sbjct: 373 MEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVG------DVITYSTLLD------ 420
Query: 175 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 234
IKV +++LE + F+ AK + + + CN LLK
Sbjct: 421 ----SYIKVQNIDAVLE-IRRRFLEAK---IPMDLVMCNILLKAFLLMGAYGEADALYRA 472
Query: 235 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
+ E P+ TY M+ G I A E+ ++ +S + V Y I LC+ G
Sbjct: 473 MPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAVC-YNRIIDALCKKGM 531
Query: 291 VDVAHKLVRKLHCK-------------------------------LHPLNSHC----FNA 315
+D A +++ +L K L LNS N
Sbjct: 532 LDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLND 591
Query: 316 VIHGFCQRGAVNEALEVLEEMKS---SRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
I C+RG+ A+EV M+ + TFP ++ N + D
Sbjct: 592 AILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDN--LRSLDAYLLVVNAGETT 649
Query: 373 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 432
+ +++YT +I N L + K+L + + + NTI N ++ C++
Sbjct: 650 LSSM--DVIDYTIII----NGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQ 703
Query: 433 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 492
G EAL L + G+ ++ +Y +I +CKE A +L+ M+ + ++P ++ Y
Sbjct: 704 GCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIY 763
Query: 493 STLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 552
++++ G+ K E R+ +R+M M R+ P+ +T + +I G+CK +
Sbjct: 764 NSIVDGYCK-LGQTEDAMRVVSRKM---------MGRV--TPDAFTVSSMIKGYCKKGDM 811
Query: 553 DLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
+ A +F E K K I D + LI + GR+ E L EM
Sbjct: 812 EEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREM 856
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 152/363 (41%), Gaps = 63/363 (17%)
Query: 235 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
++E G ++ +Y+I++ G++ A +LGK+ + G P ++TY IRGLC+ G
Sbjct: 268 MVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGK 327
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
++ A L ++ ++ + +I G C++G +N A +L +M+ P + +YN
Sbjct: 328 LEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNT 387
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
++N C G V + ++ Y++L+ + +K Q + D LE+
Sbjct: 388 VINGLCMAGRVSEADEVSK-----GVVGDVITYSTLL---DSYIKVQNI-DAVLEIRRRF 438
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
L+ I + ++CN +L+ G + EA L E + + +Y +I CK
Sbjct: 439 LEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQI 498
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI 530
+ ALE+ + K +V V
Sbjct: 499 EEALEMFNELRKSSVSAAVC---------------------------------------- 518
Query: 531 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 590
Y +ID CK +D AT++ E+ KG++ D+ T L+ H +G G+K
Sbjct: 519 --------YNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANG--GDK 568
Query: 591 NKL 593
L
Sbjct: 569 GIL 571
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 148/309 (47%), Gaps = 25/309 (8%)
Query: 309 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRT-FP-DVYSYNMLLNAFCKKGDVXXXXX 366
+S F ++I+ F ++G ++ A+EVLE M + +P D + + +++ FCK G
Sbjct: 133 SSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALG 192
Query: 367 XXXXXXXCQI-KPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNH 424
+ P++V YT+L+ LC+ G+ D+ ++ + + + ++
Sbjct: 193 FFESAVDSGVLVPNLVTYTTLVSALCQ---LGK--VDEVRDLVRRLEDEGFEFDCVFYSN 247
Query: 425 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 484
+ + + G +AL + E+G+N + SY+ +I + KE + AL L+ +M+K
Sbjct: 248 WIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEG 307
Query: 485 VLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLID 544
V P ++ Y+ +I G K ++ A LF + +G + + Y LID
Sbjct: 308 VEPNLITYTAIIRGLCK------------MGKLEEAFVLFNRILSVGIEVDEFLYVTLID 355
Query: 545 GFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNK----LFGEMKAN 600
G C+ ++ A + +M+++GI P ++TY +I GR+ E ++ + G++
Sbjct: 356 GICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITY 415
Query: 601 CILLDDGIK 609
LLD IK
Sbjct: 416 STLLDSYIK 424
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 141/317 (44%), Gaps = 24/317 (7%)
Query: 270 GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKL--HPLNSHCFNAVIHGFCQRGAVN 327
G P+ +T+ + I E G +D A +++ + K +P ++ +AVI GFC+ G
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPE 188
Query: 328 EALEVLEE-MKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSL 386
AL E + S P++ +Y L++A C+ G V + V Y++
Sbjct: 189 LALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNW 248
Query: 387 ILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFH 446
I KG L D +L M++ + + + + ++ +EG EAL LL
Sbjct: 249 I---HGYFKGGALVD-ALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMI 304
Query: 447 EQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNF 506
++G+ N +Y II +CK + A L R+L + Y TLI G ++ +
Sbjct: 305 KEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGN-- 362
Query: 507 EMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKG 566
+N A ++ +M + G P++ TY +I+G C + A ++ KG
Sbjct: 363 ----------LNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEV-----SKG 407
Query: 567 IFPDVVTYTVLIAWYHK 583
+ DV+TY+ L+ Y K
Sbjct: 408 VVGDVITYSTLLDSYIK 424
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 168/421 (39%), Gaps = 63/421 (14%)
Query: 129 IIIHTFAMAGMHLEVFALLRD----------------IVGYCKC---DDSFEQFSTLLDL 169
I++ F + G + E AL R I GYCK +++ E F+ L
Sbjct: 452 ILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKS 511
Query: 170 PHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXX 229
+ + +N +I ML+ A +V + GL L I + LL +
Sbjct: 512 SVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGIL 571
Query: 230 XXXXXL--METGPLPNIHTYTIMMSC--GDIRLAAEILGKIYRSG--------------- 270
L + + + I++ C G A E+ + R G
Sbjct: 572 GLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVD 631
Query: 271 --------------GNPT-----VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSH 311
G T V+ Y I GLC+ G++ A L + LN+
Sbjct: 632 NLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTI 691
Query: 312 CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 371
+N++I+G CQ+G + EAL + + +++ P +Y +L++ CK+G
Sbjct: 692 TYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSM 751
Query: 372 XXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 430
+ P+I+ Y S++ CK GQ + ++ V + + + P+ + +++ +C
Sbjct: 752 VSKGLVPNIIIYNSIVDGYCK---LGQT--EDAMRVVSRKMMGRVTPDAFTVSSMIKGYC 806
Query: 431 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 490
++G EAL++ +F ++ I+ + + + +I C + + A L+ ML + ++
Sbjct: 807 KKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLI 866
Query: 491 N 491
N
Sbjct: 867 N 867
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 29/233 (12%)
Query: 402 KSLEVYNSMLQN--AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN--LNQYSY 457
K L + L+N A + C+ I R +G+ A+ +LE + +N + +
Sbjct: 116 KGLLILRDCLRNHGAFPSSLTFCSLIYR-FVEKGEMDNAIEVLEMMTNKNVNYPFDNFVC 174
Query: 458 NEIIHMICKESYPKMALELMPRMLKRNVL-PGVVNYSTLISGF---AKEQSNFEMVERLF 513
+ +I CK P++AL + VL P +V Y+TL+S K ++V RL
Sbjct: 175 SAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLE 234
Query: 514 TREMNVACALF--------------------QEMSRIGCLPNLYTYTCLIDGFCKIDYID 553
C + +EM G ++ +Y+ LIDG K ++
Sbjct: 235 DEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVE 294
Query: 554 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 606
A L +M ++G+ P+++TYT +I K G++ E LF + + I +D+
Sbjct: 295 EALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDE 347
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 91/210 (43%), Gaps = 11/210 (5%)
Query: 273 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 332
P+ VTYG I LC+ G A KL+ + K N +N+++ G+C+ G +A+ V
Sbjct: 723 PSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRV 782
Query: 333 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLC 390
+ R PD ++ + ++ +CKKGD+ I + LI
Sbjct: 783 VSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCT 842
Query: 391 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNH-----ILRVHCREGQFREALTLLED- 444
K +++ + + + V S+++ R + + L C +G+ +A+ +L++
Sbjct: 843 KGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDEI 902
Query: 445 ---FHEQGINLNQYSYNEIIHMICKESYPK 471
+ G NL Y + ++ + +E K
Sbjct: 903 SSTIYPSGKNLGSYQRLQFLNDVNEEEIKK 932
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 103/427 (24%), Positives = 178/427 (41%), Gaps = 68/427 (15%)
Query: 243 NIHTYTIMMSC--GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRK 300
+IH+ + C G + A + K+ SG P ++T+ + GLC+ GY++ A LVR+
Sbjct: 122 SIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVRE 181
Query: 301 LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGD 360
+ N +N +I G C V++AL + M P+ + N++++A C+KG
Sbjct: 182 MREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGV 241
Query: 361 VXXXXXXXXXXXXCQIKPSIVNYTSLILLC----KNKLKGQQLYDKSLEVYNSMLQNAIR 416
+ + S N I++C + K + ++LEV+ M Q +
Sbjct: 242 IGNNNKKLLEEI---LDSSQANAPLDIVICTILMDSCFKNGNVV-QALEVWKEMSQKNVP 297
Query: 417 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 476
++++ N I+R C G A + D ++G+N + ++YN +I +CKE A +L
Sbjct: 298 ADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDL 357
Query: 477 MPRMLKRNVLPGVVNYSTLISGF---------------------AKEQSNFEMVERLFTR 515
M V P ++Y +I G E + +V + R
Sbjct: 358 HGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGR 417
Query: 516 EMNVACAL--FQEMSRIGCLPNLYTYTCLIDGF--------------------------- 546
+ + AL M G PN+YT LI G+
Sbjct: 418 YGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTT 477
Query: 547 --------CKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
C + ++ LA QL+DEM R+G PD++TYT L+ GR+ + L ++
Sbjct: 478 YNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQ 537
Query: 599 ANCILLD 605
A I +D
Sbjct: 538 ATGITID 544
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/423 (21%), Positives = 159/423 (37%), Gaps = 74/423 (17%)
Query: 235 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
++ +G +P + T+ +++ G I A ++ ++ G +P V+Y T I+GLC
Sbjct: 147 MIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNN 206
Query: 291 VDVAHKLVRKLH-CKLHPLNSHCFNAVIHGFCQRGAVN---------------------- 327
VD A L ++ + P C N ++H CQ+G +
Sbjct: 207 VDKALYLFNTMNKYGIRPNRVTC-NIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDI 265
Query: 328 -----------------EALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXX 370
+ALEV +EM D YN+++ C G++
Sbjct: 266 VICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCD 325
Query: 371 XXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVH 429
+ P + Y +LI LCK + +D++ +++ +M + P+ I I++
Sbjct: 326 MVKRGVNPDVFTYNTLISALCK-----EGKFDEACDLHGTMQNGGVAPDQISYKVIIQGL 380
Query: 430 CREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGV 489
C G A L + + +N +I + AL ++ ML V P V
Sbjct: 381 CIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNV 440
Query: 490 VNYSTLISGFAK--------------EQSNFEMVERLFTREMNVACAL---------FQE 526
+ LI G+ K + + + AC L + E
Sbjct: 441 YTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDE 500
Query: 527 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 586
M R GC P++ TYT L+ G C + A L ++ GI D V + +L Y + R
Sbjct: 501 MLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQR 560
Query: 587 IGE 589
GE
Sbjct: 561 PGE 563
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 202/458 (44%), Gaps = 74/458 (16%)
Query: 160 FEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCL 219
F++FS S VF++++KV+A ++++A VF + N G + SCN LL L
Sbjct: 148 FKEFS-------FSPTVFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNL 200
Query: 220 XXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGG-NPT 274
++ P++ T +I+++ G++ A + S G
Sbjct: 201 VRKGENFVALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELN 260
Query: 275 VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 334
VVTY + I G G V+ +++R + + N + ++I G+C++G + EA V E
Sbjct: 261 VVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFE 320
Query: 335 EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKL 394
+K + D + Y +L++ +C+ G QI+ ++
Sbjct: 321 LLKEKKLVADQHMYGVLMDGYCRTG---------------QIRDAV-------------- 351
Query: 395 KGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQ 454
V+++M++ +R NT ICN ++ +C+ GQ EA + ++ + +
Sbjct: 352 ----------RVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDH 401
Query: 455 YSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF--------------- 499
++YN ++ C+ Y AL+L +M ++ V+P V+ Y+ L+ G+
Sbjct: 402 HTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKM 461
Query: 500 -------AKEQSNFEMVERLFT-REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 551
A E S ++E LF + N A L++ + G L + T +I G CK++
Sbjct: 462 MLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEK 521
Query: 552 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 589
++ A ++ D + P V TY L Y+K G + E
Sbjct: 522 VNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKE 559
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 166/362 (45%), Gaps = 22/362 (6%)
Query: 243 NIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 298
N+ TY +++ GD+ +L + G + VVTY + I+G C+ G ++ A +
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 319
Query: 299 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
L K + H + ++ G+C+ G + +A+ V + M + N L+N +CK
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 379
Query: 359 GDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 417
G + +KP Y +L+ C+ D++L++ + M Q + P
Sbjct: 380 GQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCR-----AGYVDEALKLCDQMCQKEVVP 434
Query: 418 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
+ N +L+ + R G F + L+L + ++G+N ++ S + ++ + K A++L
Sbjct: 435 TVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLW 494
Query: 478 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLY 537
+L R +L + + +ISG K + ++N A + ++ C P +
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKME------------KVNEAKEILDNVNIFRCKPAVQ 542
Query: 538 TYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
TY L G+ K+ + A + + M+RKGIFP + Y LI+ K+ + + L E+
Sbjct: 543 TYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIEL 602
Query: 598 KA 599
+A
Sbjct: 603 RA 604
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 123/565 (21%), Positives = 219/565 (38%), Gaps = 88/565 (15%)
Query: 118 HGFSHSVNYFRIIIHTFAMAGMHLE---VFALLRD-------------IVGYCKCD---D 158
G S +V + +I + G+ E VF LL++ + GYC+ D
Sbjct: 290 RGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTGQIRD 349
Query: 159 SFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLK 217
+ ++++ + + N LI + + L A Q+F + L+ + N L+
Sbjct: 350 AVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVD 409
Query: 218 CLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCGDIRLAA-----EILGKIYRSGGN 272
+ + +P + TY I++ G R+ A + + + G N
Sbjct: 410 GYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLK-GYSRIGAFHDVLSLWKMMLKRGVN 468
Query: 273 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 332
++ T + L + G + A KL + + ++ N +I G C+ VNEA E+
Sbjct: 469 ADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEI 528
Query: 333 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI----- 387
L+ + R P V +Y L + + K G++ I P+I Y +LI
Sbjct: 529 LDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFK 588
Query: 388 ---------LLCKNKLKGQQ-----------------LYDKSLEVYNSMLQNAIRPNTII 421
L+ + + +G + DK+ M++ I N I
Sbjct: 589 YRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNI 648
Query: 422 CNHILRVHCREGQFREALTLLEDFHEQGINLNQY----SYNEIIHMICKESYPKMALELM 477
C+ I R + EA LL+ + + L Y + E C ++ K+A +
Sbjct: 649 CSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKT-QKIAESVE 707
Query: 478 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTR---------------------- 515
K+ ++P + Y+ I+G K E +LF+
Sbjct: 708 NSTPKKLLVPNNIVYNVAIAGLCK-AGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCA 766
Query: 516 ---EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
++N A L EM+ G +PN+ TY LI G CK+ +D A +L ++ +KGI P+ +
Sbjct: 767 IAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAI 826
Query: 573 TYTVLIAWYHKHGRIGEKNKLFGEM 597
TY LI K G + E +L +M
Sbjct: 827 TYNTLIDGLVKSGNVAEAMRLKEKM 851
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 106/524 (20%), Positives = 190/524 (36%), Gaps = 110/524 (20%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
+V+ +N LI +A +E +V G+ ++ + L+K
Sbjct: 260 NVVTYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVF 319
Query: 233 XXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
L E + + H Y ++M G IR A + + G + I G C+
Sbjct: 320 ELLKEKKLVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKS 379
Query: 289 GYVDVAHKLVRKLH-CKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 347
G + A ++ +++ L P + H +N ++ G+C+ G V+EAL++ ++M P V +
Sbjct: 380 GQLVEAEQIFSRMNDWSLKP-DHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMT 438
Query: 348 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVY 407
YN+LL + + G + ++ ++L+ L ++++++++
Sbjct: 439 YNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLL----EALFKLGDFNEAMKLW 494
Query: 408 NSMLQNAIRPNTIICNHILRVHCRE----------------------------------- 432
++L + +TI N ++ C+
Sbjct: 495 ENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKV 554
Query: 433 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 492
G +EA + E +GI YN +I K + +L+ + R + P V Y
Sbjct: 555 GNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATY 614
Query: 493 STLISGF-------AKEQSNFEMVERLFTREMNV----------------ACALFQ---- 525
LI+G+ + FEM+E+ T +N+ AC L Q
Sbjct: 615 GALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVD 674
Query: 526 ---------------EMSRIGCL-------------------PNLYTYTCLIDGFCKIDY 551
E S CL PN Y I G CK
Sbjct: 675 FDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGK 734
Query: 552 IDLATQLFDEMKRKGIF-PDVVTYTVLIAWYHKHGRIGEKNKLF 594
++ A +LF ++ F PD TYT+LI H G+ NK F
Sbjct: 735 LEDARKLFSDLLSSDRFIPDEYTYTILI---HGCAIAGDINKAF 775
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 136/334 (40%), Gaps = 53/334 (15%)
Query: 239 GPLPNIHTYTIMMSCG----DIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
G P I Y ++S + A+++ ++ G PTV TYG I G C G +D A
Sbjct: 571 GIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKA 630
Query: 295 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 354
+ ++ K LN + + + + + ++EA +L++ + +++LL
Sbjct: 631 YATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQK---------IVDFDLLLPG 681
Query: 355 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 414
+ Q + ++ C LK Q++ + V NS +
Sbjct: 682 Y-------------------QSLKEFLEASATT--C---LKTQKIAE---SVENSTPKKL 714
Query: 415 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL-NQYSYNEIIHMICKESYPKMA 473
+ PN I+ N + C+ G+ +A L D + ++Y+Y +IH A
Sbjct: 715 LVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKA 774
Query: 474 LELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCL 533
L M + ++P +V Y+ LI G K N + +RL ++ + G
Sbjct: 775 FTLRDEMALKGIIPNIVTYNALIKGLCK-LGNVDRAQRLL-----------HKLPQKGIT 822
Query: 534 PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 567
PN TY LIDG K + A +L ++M KG+
Sbjct: 823 PNAITYNTLIDGLVKSGNVAEAMRLKEKMIEKGL 856
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 160/360 (44%), Gaps = 18/360 (5%)
Query: 252 SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSH 311
S G + A +++ + R P + +RGL +D A ++R + ++
Sbjct: 116 SNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVMVMSGGVPDTI 175
Query: 312 CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 371
+N +I C++G + AL +LE+M S + PDV +YN ++ G+
Sbjct: 176 TYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQ 235
Query: 372 XXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 430
P ++ YT L+ L+C+ +++EV M P+ + N ++ +C
Sbjct: 236 LQNGCPPFMITYTVLVELVCRYCGSA-----RAIEVLEDMAVEGCYPDIVTYNSLVNYNC 290
Query: 431 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 490
R G E ++++ G+ LN +YN ++H +C Y E++ M + + P V+
Sbjct: 291 RRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTSYCPTVI 350
Query: 491 NYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 550
Y+ LI+G K RL +R ++ F +M CLP++ TY ++ K
Sbjct: 351 TYNILINGLCK--------ARLLSRAID----FFYQMLEQKCLPDIVTYNTVLGAMSKEG 398
Query: 551 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKK 610
+D A +L +K P ++TY +I K G + + +L+ +M I DD ++
Sbjct: 399 MVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRR 458
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 119/520 (22%), Positives = 207/520 (39%), Gaps = 40/520 (7%)
Query: 96 RVIKSLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMH-LEVFALLRDIVGYC 154
R SL+WK K + HG SV + H + H V LR V
Sbjct: 29 RKFSSLDWKQEIGLKKDVFFRCHGLLSSVCIDNVNDHAERSSEFHHYGVGTNLRARV--- 85
Query: 155 KCDDSFEQFSTLLDLP--HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSC 212
+QF D P + N ++ SN L A ++ H SC
Sbjct: 86 ---KPMKQFGLSSDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSC 142
Query: 213 NFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--C--GDIRLAAEILGKIYR 268
+ L++ L ++ +G +P+ TY +++ C G IR A +L +
Sbjct: 143 SNLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSL 202
Query: 269 SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 328
SG P V+TY T IR + + G + A + + P + ++ C+
Sbjct: 203 SGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSAR 262
Query: 329 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL 388
A+EVLE+M +PD+ +YN L+N C++G++ ++ + V Y +L+
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLL- 321
Query: 389 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 448
+ L + +D+ E+ N M Q + P I N ++ C+ A+ EQ
Sbjct: 322 ---HSLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQ 378
Query: 449 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKE---QSN 505
+ +YN ++ + KE A+EL+ + PG++ Y+++I G AK+ +
Sbjct: 379 KCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKA 438
Query: 506 FEMVERLF---------TRE-----------MNVACALFQEMSRIGCLPNLYTYTCLIDG 545
E+ ++ TR + A + +E S G TY +I G
Sbjct: 439 LELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQG 498
Query: 546 FCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
CK I++A ++ + M G PD YT ++ + G
Sbjct: 499 LCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGVEEMG 538
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 125/275 (45%), Gaps = 8/275 (2%)
Query: 239 GPLPNIHTYTIMMS--C--GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
G P+I TY +++ C G++ A ++ I G VTY T + LC Y D
Sbjct: 274 GCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEV 333
Query: 295 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 354
+++ ++ + +N +I+G C+ ++ A++ +M + PD+ +YN +L A
Sbjct: 334 EEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGA 393
Query: 355 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 414
K+G V P ++ Y S+I + L + L K+LE+Y+ ML
Sbjct: 394 MSKEGMVDDAIELLGLLKNTCCPPGLITYNSVI----DGLAKKGLMKKALELYHQMLDAG 449
Query: 415 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 474
I P+ I ++ CR EA +L++ +G + +Y +I +CK+ +MA+
Sbjct: 450 IFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAI 509
Query: 475 ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV 509
E++ ML P Y+ ++ G + E V
Sbjct: 510 EVVEIMLTGGCKPDETIYTAIVKGVEEMGMGSEAV 544
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 12/148 (8%)
Query: 453 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 512
++ + NEI+H +C A +L+ M + N +P + S L+ G A+
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLAR----------- 151
Query: 513 FTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
+++ A + + M G +P+ TY +I CK +I A L ++M G PDV+
Sbjct: 152 -IDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVI 210
Query: 573 TYTVLIAWYHKHGRIGEKNKLFGEMKAN 600
TY +I +G + + + + N
Sbjct: 211 TYNTVIRCMFDYGNAEQAIRFWKDQLQN 238
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 188/433 (43%), Gaps = 19/433 (4%)
Query: 160 FEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCL 219
F +FS HS +N+L + + + A Q+F K+ G+ + R FL+
Sbjct: 89 FWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSF 148
Query: 220 XXXXXXXXXXXXXXXLMET-GPLPNIHTY-TIMMSCGDIRLAAEILGKIYRSGGNPTVVT 277
E G +++ ++ + A ++ + R T
Sbjct: 149 AEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKT 208
Query: 278 YGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMK 337
+ IRGLC G + A +L+ + + +N +I GFC+ +N+A E+ +++K
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 338 S-SRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 396
S S PDV +Y +++ +CK G + I P+ V + +L+ G
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFN--VLVDGYAKAG 326
Query: 397 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 456
+ L + E+ M+ P+ + ++ +CR GQ + L E+ + +G+ N ++
Sbjct: 327 EMLTAE--EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRE 516
Y+ +I+ +C E+ A EL+ ++ ++++P Y+ +I GF K +
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCK------------AGK 432
Query: 517 MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTV 576
+N A + +EM + C P+ T+T LI G C + A +F +M G PD +T +
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSS 492
Query: 577 LIAWYHKHGRIGE 589
L++ K G E
Sbjct: 493 LLSCLLKAGMAKE 505
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 142/328 (43%), Gaps = 19/328 (5%)
Query: 277 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 336
TY R LC+ G D+A ++ + N+ ++ F ++G ++ A +L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 337 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 396
+S N LLN K V Q + LI L G
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILI----RGLCG 218
Query: 397 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI-NLNQY 455
+K+LE+ M P+ + N +++ C+ + +A + +D + + +
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 456 SYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTR 515
+Y +I CK + A L+ ML+ + P V ++ L+ G+AK
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK------------AG 326
Query: 516 EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYT 575
EM A + +M GC P++ T+T LIDG+C++ + +L++EM +G+FP+ TY+
Sbjct: 327 EMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYS 386
Query: 576 VLIAWYHKHGRIGEKNKLFGEMKANCIL 603
+LI R+ + +L G++ + I+
Sbjct: 387 ILINALCNENRLLKARELLGQLASKDII 414
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 130/299 (43%), Gaps = 10/299 (3%)
Query: 146 LLRDIVGYCKCDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVG 204
L+R + G K + + E + ++ +N LI+ F ++ L A ++F K+
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 205 L-ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLA 259
+ + + ++ ++ G P T+ +++ G++ A
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
Query: 260 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHG 319
EI GK+ G P VVT+ + I G C G V +L +++ + N+ ++ +I+
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 320 FCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPS 379
C + +A E+L ++ S P + YN +++ FCK G V + KP
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Query: 380 IVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREA 438
+ +T IL+ + +KG+ +++ +++ M+ P+ I + +L + G +EA
Sbjct: 452 KITFT--ILIIGHCMKGRMF--EAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 23/174 (13%)
Query: 455 YSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFT 514
++YN + +CK +A ++ M V P L+S FA E+ L
Sbjct: 104 WTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFA-EKGKLHFATALLL 162
Query: 515 REMNV----------------------ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 552
+ V A LF E R + T+ LI G C +
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 553 DLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 606
+ A +L M G PD+VTY LI + K + + +++F ++K+ + D
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/433 (22%), Positives = 188/433 (43%), Gaps = 19/433 (4%)
Query: 160 FEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCL 219
F +FS HS +N+L + + + A Q+F K+ G+ + R FL+
Sbjct: 89 FWEFSRFKLNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSF 148
Query: 220 XXXXXXXXXXXXXXXLMET-GPLPNIHTY-TIMMSCGDIRLAAEILGKIYRSGGNPTVVT 277
E G +++ ++ + A ++ + R T
Sbjct: 149 AEKGKLHFATALLLQSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKT 208
Query: 278 YGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMK 337
+ IRGLC G + A +L+ + + +N +I GFC+ +N+A E+ +++K
Sbjct: 209 FNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVK 268
Query: 338 S-SRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 396
S S PDV +Y +++ +CK G + I P+ V + +L+ G
Sbjct: 269 SGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFN--VLVDGYAKAG 326
Query: 397 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 456
+ L + E+ M+ P+ + ++ +CR GQ + L E+ + +G+ N ++
Sbjct: 327 EMLTAE--EIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFT 384
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRE 516
Y+ +I+ +C E+ A EL+ ++ ++++P Y+ +I GF K +
Sbjct: 385 YSILINALCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCK------------AGK 432
Query: 517 MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTV 576
+N A + +EM + C P+ T+T LI G C + A +F +M G PD +T +
Sbjct: 433 VNEANVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSS 492
Query: 577 LIAWYHKHGRIGE 589
L++ K G E
Sbjct: 493 LLSCLLKAGMAKE 505
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 142/328 (43%), Gaps = 19/328 (5%)
Query: 277 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 336
TY R LC+ G D+A ++ + N+ ++ F ++G ++ A +L +
Sbjct: 105 TYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALL--L 162
Query: 337 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 396
+S N LLN K V Q + LI L G
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILI----RGLCG 218
Query: 397 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI-NLNQY 455
+K+LE+ M P+ + N +++ C+ + +A + +D + + +
Sbjct: 219 VGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVV 278
Query: 456 SYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTR 515
+Y +I CK + A L+ ML+ + P V ++ L+ G+AK
Sbjct: 279 TYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAK------------AG 326
Query: 516 EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYT 575
EM A + +M GC P++ T+T LIDG+C++ + +L++EM +G+FP+ TY+
Sbjct: 327 EMLTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYS 386
Query: 576 VLIAWYHKHGRIGEKNKLFGEMKANCIL 603
+LI R+ + +L G++ + I+
Sbjct: 387 ILINALCNENRLLKARELLGQLASKDII 414
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/299 (20%), Positives = 130/299 (43%), Gaps = 10/299 (3%)
Query: 146 LLRDIVGYCKCDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVG 204
L+R + G K + + E + ++ +N LI+ F ++ L A ++F K+
Sbjct: 212 LIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGS 271
Query: 205 L-ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLA 259
+ + + ++ ++ G P T+ +++ G++ A
Sbjct: 272 VCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTA 331
Query: 260 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHG 319
EI GK+ G P VVT+ + I G C G V +L +++ + N+ ++ +I+
Sbjct: 332 EEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINA 391
Query: 320 FCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPS 379
C + +A E+L ++ S P + YN +++ FCK G V + KP
Sbjct: 392 LCNENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPD 451
Query: 380 IVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREA 438
+ +T IL+ + +KG+ +++ +++ M+ P+ I + +L + G +EA
Sbjct: 452 KITFT--ILIIGHCMKGRMF--EAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEA 506
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 66/174 (37%), Gaps = 23/174 (13%)
Query: 455 YSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFT 514
++YN + +CK +A ++ M V P L+S FA E+ L
Sbjct: 104 WTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFA-EKGKLHFATALLL 162
Query: 515 REMNV----------------------ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 552
+ V A LF E R + T+ LI G C +
Sbjct: 163 QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVGKA 222
Query: 553 DLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 606
+ A +L M G PD+VTY LI + K + + +++F ++K+ + D
Sbjct: 223 EKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPD 276
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 134/301 (44%), Gaps = 18/301 (5%)
Query: 297 LVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 356
+ R++ CK P N H + +I + G +++ LEV +EM S V+SY L+NA+
Sbjct: 131 MQRQIWCK--P-NEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYG 187
Query: 357 KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIR 416
+ G +I PSI+ Y ++I C +G ++ L ++ M I+
Sbjct: 188 RNGRYETSLELLDRMKNEKISPSILTYNTVINACA---RGGLDWEGLLGLFAEMRHEGIQ 244
Query: 417 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 476
P+ + N +L G EA + ++ GI + +Y+ ++ K + +L
Sbjct: 245 PDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDL 304
Query: 477 MPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNL 536
+ M LP + +Y+ L+ +AK S + A +F +M GC PN
Sbjct: 305 LGEMASGGSLPDITSYNVLLEAYAKSGS------------IKEAMGVFHQMQAAGCTPNA 352
Query: 537 YTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE 596
TY+ L++ F + D QLF EMK PD TY +LI + + G E LF +
Sbjct: 353 NTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHD 412
Query: 597 M 597
M
Sbjct: 413 M 413
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/491 (20%), Positives = 205/491 (41%), Gaps = 36/491 (7%)
Query: 117 THGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLV 176
+ G S SV + +I+ + G + LL + E+ S S+L
Sbjct: 169 SQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKN--------EKISP-------SILT 213
Query: 177 FNVLIKVFASNSM-LEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 235
+N +I A + E +F ++ G++ I + N LL +
Sbjct: 214 YNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM 273
Query: 236 METGPLPNIHTYT-IMMSCGDIRL---AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 291
+ G +P++ TY+ ++ + G +R ++LG++ G P + +Y + + G +
Sbjct: 274 NDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSI 333
Query: 292 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 351
A + ++ N++ ++ +++ F Q G ++ ++ EMKSS T PD +YN+L
Sbjct: 334 KEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNIL 393
Query: 352 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML 411
+ F + G I+P + Y +I C KG L++ + ++ M
Sbjct: 394 IEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACG---KG-GLHEDARKILQYMT 449
Query: 412 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 471
N I P++ ++ + + EAL HE G N + +++ +++ + K
Sbjct: 450 ANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVK 509
Query: 472 MALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIG 531
+ ++ R++ + ++ I + K+ FE A + +M +
Sbjct: 510 ESEAILSRLVDSGIPRNRDTFNAQIEAY-KQGGKFEE-----------AVKTYVDMEKSR 557
Query: 532 CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKN 591
C P+ T ++ + +D + F+EMK I P ++ Y +++A Y K R + N
Sbjct: 558 CDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVN 617
Query: 592 KLFGEMKANCI 602
+L EM +N +
Sbjct: 618 ELLEEMLSNRV 628
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 104/525 (19%), Positives = 194/525 (36%), Gaps = 78/525 (14%)
Query: 123 SVNYFRIIIHTFAMAG---MHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNV 179
S+N F ++ FA G L +F ++ + +CK ++ ++ +
Sbjct: 104 SLNDFALVFKEFAGRGDWQRSLRLFKYMQRQI-WCKPNEH----------------IYTI 146
Query: 180 LIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETG 239
+I + +L+ +VF + G+ + S L+ +
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEK 206
Query: 240 PLPNIHTY-TIMMSCGDIRLAAE----ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
P+I TY T++ +C L E + ++ G P +VTY T + G D A
Sbjct: 207 ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEA 266
Query: 295 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 354
+ R ++ + ++ ++ F + + + ++L EM S + PD+ SYN+LL A
Sbjct: 267 EMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEA 326
Query: 355 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQ-LYDKSLEVYNSMLQN 413
+ K G + P+ Y+ L+ L GQ YD +++ M +
Sbjct: 327 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLL-----NLFGQSGRYDDVRQLFLEMKSS 381
Query: 414 AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMA 473
P+ N ++ V G F+E +TL D E+ I + +Y II K + A
Sbjct: 382 NTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDA 441
Query: 474 LELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCL 533
+++ M +++P Y+ +I F + E A F M +G
Sbjct: 442 RKILQYMTANDIVPSSKAYTGVIEAFGQAALYEE------------ALVAFNTMHEVGSN 489
Query: 534 PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL 593
P++ T+ L+ F + + + + + GI + T+ I Y + G+ E K
Sbjct: 490 PSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKT 549
Query: 594 -----------------------------------FGEMKANCIL 603
F EMKA+ IL
Sbjct: 550 YVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDIL 594
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 16/216 (7%)
Query: 393 KLKGQQLYDKSLEVYNSMLQNAI--RPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 450
+ G+ + +SL ++ M Q I +PN I ++ + REG + L + ++ QG+
Sbjct: 114 EFAGRGDWQRSLRLFKYM-QRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGV 172
Query: 451 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 510
+ + +SY +I+ + + +LEL+ RM + P ++ Y+T+I+ A+ ++E +
Sbjct: 173 SRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGL- 231
Query: 511 RLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI-DLATQLFDEMKRKGIFP 569
LF EM G P++ TY L+ C I + D A +F M GI P
Sbjct: 232 ----------LGLFAEMRHEGIQPDIVTYNTLLSA-CAIRGLGDEAEMVFRTMNDGGIVP 280
Query: 570 DVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
D+ TY+ L+ + K R+ + L GEM + L D
Sbjct: 281 DLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPD 316
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/468 (16%), Positives = 168/468 (35%), Gaps = 67/468 (14%)
Query: 174 VLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXX 233
++ +N L+ A + + A VF + + G+ + + + L++
Sbjct: 247 IVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLG 306
Query: 234 XLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECG 289
+ G LP+I +Y +++ G I+ A + ++ +G P TY + + G
Sbjct: 307 EMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSG 366
Query: 290 YVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 349
D +L ++ ++ +N +I F + G E + + +M PD+ +Y
Sbjct: 367 RYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYE 426
Query: 350 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNS 409
++ A K G I PS YT +I LY+++L +N+
Sbjct: 427 GIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVI----EAFGQAALYEEALVAFNT 482
Query: 410 M-----------------------------------LQNAIRPNTIICNHILRVHCREGQ 434
M + + I N N + + + G+
Sbjct: 483 MHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGK 542
Query: 435 FREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYST 494
F EA+ D + + ++ + ++ + E M ++LP ++ Y
Sbjct: 543 FEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCM 602
Query: 495 LISGFAKEQS----NFEMVERLFTREMNVACALFQ--------------------EMSRI 530
+++ + K + N + E L R N+ + Q +++
Sbjct: 603 MLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSE 662
Query: 531 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 578
GC + Y L+D + + A ++ +E ++G+FP++ L+
Sbjct: 663 GCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPELFRKNKLV 710
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 109/506 (21%), Positives = 209/506 (41%), Gaps = 41/506 (8%)
Query: 118 HGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVF 177
+GFS S+ + +I +A GM E L + D V +
Sbjct: 343 NGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPD---------------VFTY 387
Query: 178 NVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLME 237
L+ F +E A +F +N G + +I + N +K +
Sbjct: 388 TTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 238 TGPLPNIHTYTIMMSC-GDIRLAAEILG---KIYRSGGNPTVVTYGTYIRGLCECGYVDV 293
G P+I T+ +++ G + +E+ G ++ R+G P T+ T I CG +
Sbjct: 448 CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQ 507
Query: 294 AHKLVRK-LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLL 352
A + R+ L + P + +N V+ + G ++ +VL EM+ R P+ +Y LL
Sbjct: 508 AMTVYRRMLDAGVTP-DLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLL 566
Query: 353 NAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQ 412
+A+ ++ I+P V +L+L+C L ++ ++ + +
Sbjct: 567 HAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSK----CDLLPEAERAFSELKE 622
Query: 413 NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 472
P+ N ++ ++ R +A +L+ E+G + +YN +++M + +
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGK 682
Query: 473 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGC 532
+ E++ +L + + P +++Y+T+I + + TR M A +F EM G
Sbjct: 683 SEEILREILAKGIKPDIISYNTVIYAYCRN-----------TR-MRDASRIFSEMRNSGI 730
Query: 533 LPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNK 592
+P++ TY I + + A + M + G P+ TY ++ Y K R E K
Sbjct: 731 VPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEA-K 789
Query: 593 LFGEMKANCILLDDGIKKLQDPKLVQ 618
LF E N LD K +D +L++
Sbjct: 790 LFVEDLRN---LDPHAPKGEDLRLLE 812
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 109/542 (20%), Positives = 206/542 (38%), Gaps = 58/542 (10%)
Query: 115 VETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVG----------------YCKCDD 158
++ GFS V + +I FA +G + E + + + + K
Sbjct: 199 LQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGT 258
Query: 159 SFEQFSTLL-----DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCN 213
+ + ++L+ D +N LI S+ + A QVF K G + N
Sbjct: 259 PWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYN 318
Query: 214 FLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRS 269
LL ++ G P+I TY ++S G + A E+ ++
Sbjct: 319 ALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEK 378
Query: 270 GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEA 329
G P V TY T + G G V+ A + ++ N FNA I + RG E
Sbjct: 379 GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 330 LEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL 389
+++ +E+ PD+ ++N LL F + G P + +LI
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 390 ---CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFH 446
C + +++++ VY ML + P+ N +L R G + ++ +L +
Sbjct: 499 YSRCGS-------FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Query: 447 EQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLI---------- 496
+ N+ +Y ++H + L + + P V TL+
Sbjct: 552 DGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLP 611
Query: 497 -----------SGFAKEQSNFEMVERLFTREMNVACA--LFQEMSRIGCLPNLYTYTCLI 543
GF+ + + + ++ R VA A + M G P++ TY L+
Sbjct: 612 EAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLM 671
Query: 544 DGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 603
+ + ++ E+ KGI PD+++Y +I Y ++ R+ + +++F EM+ + I+
Sbjct: 672 YMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIV 731
Query: 604 LD 605
D
Sbjct: 732 PD 733
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 97/221 (43%), Gaps = 25/221 (11%)
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
++N + ++ + ++ G++REA+ + + E G +YN I+++
Sbjct: 195 MFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFG 254
Query: 466 KESYPKMAL-ELMPRMLKRNVLPGVVNYSTLIS---------------------GFAKEQ 503
K P + L+ +M + P Y+TLI+ GF+ ++
Sbjct: 255 KMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDK 314
Query: 504 SNFEMVERLFTR--EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE 561
+ + ++ + A + EM G P++ TY LI + + +D A +L ++
Sbjct: 315 VTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQ 374
Query: 562 MKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK-ANC 601
M KG PDV TYT L++ + + G++ +F EM+ A C
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 84/194 (43%), Gaps = 17/194 (8%)
Query: 407 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 466
Y SML N++ I+ + +EG+ A + E G +L+ YSY +I
Sbjct: 167 YQSMLDNSV------VAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFAN 220
Query: 467 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQE 526
+ A+ + +M + P ++ Y+ +++ F K + + N +L ++
Sbjct: 221 SGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPW-----------NKITSLVEK 269
Query: 527 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 586
M G P+ YTY LI + A Q+F+EMK G D VTY L+ Y K R
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 587 IGEKNKLFGEMKAN 600
E K+ EM N
Sbjct: 330 PKEAMKVLNEMVLN 343
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 173/365 (47%), Gaps = 24/365 (6%)
Query: 235 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
+M+ G P+I T + +++ I+ A + G++ + G VV I LC+
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
V A ++++++ + N ++++I G C+ G + +A L EM S + P+V +++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNS 409
L++A+ K+G + I P++ Y+SLI LC D+++++ +
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCM-----HNRVDEAIKMLDL 178
Query: 410 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 469
M+ PN + + + + + + + LL+D ++G+ N S N +I +
Sbjct: 179 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGK 238
Query: 470 PKMALELMPRMLKRNVLPGVVNYSTLISG-FAKEQSNFEMVERLFTREMNVACALFQEMS 528
+AL + M ++P + +Y+ +++G FA + VE+ +R F+ M
Sbjct: 239 IDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGE-----VEKALSR--------FEHMQ 285
Query: 529 RIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIG 588
+ ++ TYT +I G CK + A LF ++K K + PD YT++IA ++ G
Sbjct: 286 KTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRT 345
Query: 589 EKNKL 593
E + L
Sbjct: 346 EADAL 350
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 148/334 (44%), Gaps = 16/334 (4%)
Query: 265 KIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRG 324
K+ + G P +VT + + G C + A + ++ + +I C+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 325 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYT 384
V ALEVL+ MK P+V +Y+ L+ CK G + +I P+++ ++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 385 SLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 444
+LI + K K VY M+Q +I PN + ++ C + EA+ +L+
Sbjct: 123 ALIDAYAKRGK----LSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDL 178
Query: 445 FHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS 504
+G N +Y+ + + K S ++L+ M +R V V+ +TLI G+ +
Sbjct: 179 MISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAG- 237
Query: 505 NFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 564
++++A +F M+ G +PN+ +Y ++ G ++ A F+ M++
Sbjct: 238 -----------KIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQK 286
Query: 565 KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
D++TYT++I K + E LF ++K
Sbjct: 287 TRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLK 320
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 18/262 (6%)
Query: 343 PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYD 401
PD+ + + L+N FC + IK +V T LI LCKN+L
Sbjct: 11 PDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL-----VV 65
Query: 402 KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEII 461
+LEV M I PN + + ++ C+ G+ +A L + + IN N +++ +I
Sbjct: 66 PALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALI 125
Query: 462 HMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVAC 521
K + M++ ++ P V YS+LI G ++ A
Sbjct: 126 DAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHN------------RVDEAI 173
Query: 522 ALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWY 581
+ M GC PN+ TY+ L +GF K +D +L D+M ++G+ + V+ LI Y
Sbjct: 174 KMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGY 233
Query: 582 HKHGRIGEKNKLFGEMKANCIL 603
+ G+I +FG M +N ++
Sbjct: 234 FQAGKIDLALGVFGYMTSNGLI 255
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 12/126 (9%)
Query: 477 MPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNL 536
M +M+K + P +V S+L++GF + + A + +M ++G ++
Sbjct: 1 MLKMMKLGIEPDIVTASSLVNGFC------------LSNSIKDAVYVAGQMEKMGIKRDV 48
Query: 537 YTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE 596
T LID CK + A ++ MK +GI P+VVTY+ LI K GR+ + + E
Sbjct: 49 VVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHE 108
Query: 597 MKANCI 602
M + I
Sbjct: 109 MDSKKI 114
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 98/188 (52%), Gaps = 12/188 (6%)
Query: 410 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 469
M Q+ I+ + +I I+ C++G A L + HE+GI N +YN +I C
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 470 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSR 529
A +L+ M+++ + P +V +S LI+ F KE R+++ A +++EM R
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKE------------RKVSEAEEIYKEMLR 108
Query: 530 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 589
P TY +IDGFCK D +D A ++ D M KG PDVVT++ LI Y K R+
Sbjct: 109 WSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDN 168
Query: 590 KNKLFGEM 597
++F EM
Sbjct: 169 GMEIFCEM 176
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 111/225 (49%), Gaps = 22/225 (9%)
Query: 376 IKPSIVNYTSLI-LLCK--NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 432
IK +V T+++ LCK N + Q L+ M + I PN + N ++ C
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLF-------TEMHEKGIFPNVLTYNCMIDSFCHS 58
Query: 433 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 492
G++ +A LL E+ IN + +++ +I+ KE A E+ ML+ ++ P + Y
Sbjct: 59 GRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITY 118
Query: 493 STLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 552
+++I GF K+ ++ A + M+ GC P++ T++ LI+G+CK +
Sbjct: 119 NSMIDGFCKQD------------RVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRV 166
Query: 553 DLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
D ++F EM R+GI + VTYT LI + + G + L EM
Sbjct: 167 DNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 211
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 116/250 (46%), Gaps = 16/250 (6%)
Query: 315 AVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXC 374
A++ C+ G A + EM FP+V +YN ++++FC G
Sbjct: 15 AIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEK 74
Query: 375 QIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQ 434
QI P IV +++LI N ++ ++ E+Y ML+ +I P TI N ++ C++ +
Sbjct: 75 QINPDIVTFSALI----NAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDR 130
Query: 435 FREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYST 494
+A +L+ +G + + +++ +I+ CK +E+ M +R ++ V Y+T
Sbjct: 131 VDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTT 190
Query: 495 LISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDL 554
LI GF + +++ A L EM G P+ T+ C++ G C +
Sbjct: 191 LIHGFCQ------------VGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRK 238
Query: 555 ATQLFDEMKR 564
A + +++++
Sbjct: 239 AFAILEDLQK 248
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 107/246 (43%), Gaps = 9/246 (3%)
Query: 275 VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 334
VV + LC+ G A L ++H K N +N +I FC G ++A ++L
Sbjct: 10 VVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLR 69
Query: 335 EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNK 393
M + PD+ +++ L+NAF K+ V I P+ + Y S+I CK
Sbjct: 70 HMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCK-- 127
Query: 394 LKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLN 453
Q D + + +SM P+ + + ++ +C+ + + + + H +GI N
Sbjct: 128 ---QDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 184
Query: 454 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS---NFEMVE 510
+Y +IH C+ A +L+ M+ V P + + +++G ++ F ++E
Sbjct: 185 TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILE 244
Query: 511 RLFTRE 516
L E
Sbjct: 245 DLQKSE 250
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 100/225 (44%), Gaps = 6/225 (2%)
Query: 259 AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIH 318
A + +++ G P V+TY I C G A +L+R + K + F+A+I+
Sbjct: 29 AQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALIN 88
Query: 319 GFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKP 378
F + V+EA E+ +EM FP +YN +++ FCK+ V P
Sbjct: 89 AFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSP 148
Query: 379 SIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFRE 437
+V +++LI CK K D +E++ M + I NT+ ++ C+ G
Sbjct: 149 DVVTFSTLINGYCKAKR-----VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDA 203
Query: 438 ALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLK 482
A LL + G+ + +++ ++ +C + + A ++ + K
Sbjct: 204 AQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 4/193 (2%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
+VL +N +I F + A Q+ + I + + L+
Sbjct: 44 NVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIY 103
Query: 233 XXLMETGPLPNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
++ P TY M+ C R+ A +L + G +P VVT+ T I G C+
Sbjct: 104 KEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKA 163
Query: 289 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 348
VD ++ ++H + N+ + +IHGFCQ G ++ A ++L EM S PD ++
Sbjct: 164 KRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITF 223
Query: 349 NMLLNAFCKKGDV 361
+ +L C K ++
Sbjct: 224 HCMLAGLCSKKEL 236
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 165/368 (44%), Gaps = 20/368 (5%)
Query: 235 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
L+E G P++ TYT +++ ++ K+ ++G P + + I E G
Sbjct: 345 LIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 404
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM-KSSRTFPDVYSYN 349
+D A K+ K+ + FN +I G+ + G + E+ +L+ M + P+ + N
Sbjct: 405 LDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCN 464
Query: 350 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNS 409
+L+ A+C + + +KP +V + +L K + +
Sbjct: 465 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTL---AKAYARIGSTCTAEDMIIPR 521
Query: 410 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 469
ML N ++PN C I+ +C EG+ EAL E G++ N + +N +I +
Sbjct: 522 MLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIND 581
Query: 470 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSR 529
E++ M + V P VV +STL++ ++ +M ++ +M
Sbjct: 582 MDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSS------------VGDMKRCEEIYTDMLE 629
Query: 530 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 589
G P+++ ++ L G+ + + A Q+ ++M++ G+ P+VV YT +I+ + G + +
Sbjct: 630 GGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKK 689
Query: 590 KNKLFGEM 597
+++ +M
Sbjct: 690 AMQVYKKM 697
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 160/386 (41%), Gaps = 79/386 (20%)
Query: 252 SCGDIRL----------------AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAH 295
+CGD+R A I + G P+++TY T + L +
Sbjct: 315 TCGDVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLL 374
Query: 296 KLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAF 355
L+ K+ ++ FNA+I+ + G +++A+++ E+MK S P ++N L+ +
Sbjct: 375 SLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGY 434
Query: 356 CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA- 414
K G + ++S + + ML++
Sbjct: 435 GKIGKL---------------------------------------EESSRLLDMMLRDEM 455
Query: 415 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 474
++PN CN +++ C + + EA ++ G+ + ++N + + A
Sbjct: 456 LQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAE 515
Query: 475 ELM-PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCL 533
+++ PRML V P V T+++G+ +E +M A F M +G
Sbjct: 516 DMIIPRMLHNKVKPNVRTCGTIVNGYCEEG------------KMEEALRFFYRMKELGVH 563
Query: 534 PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL 593
PNL+ + LI GF I+ +D ++ D M+ G+ PDVVT++ L+ + G + ++
Sbjct: 564 PNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEI 623
Query: 594 FGEMKANCILLDDGIKKLQDPKLVQF 619
+ +M L+ GI DP + F
Sbjct: 624 YTDM------LEGGI----DPDIHAF 639
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 163/421 (38%), Gaps = 60/421 (14%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
++FN +I + + L+ A ++F K G + + N L+K
Sbjct: 388 DTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLL 447
Query: 233 XXLMETGPL-PNIHTYTIMMSCG----DIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE 287
++ L PN T I++ I A I+ K+ G P VVT+ T +
Sbjct: 448 DMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYAR 507
Query: 288 CGYVDVAHKLV--RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDV 345
G A ++ R LH K+ P N +++G+C+ G + EAL MK P++
Sbjct: 508 IGSTCTAEDMIIPRMLHNKVKP-NVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNL 566
Query: 346 YSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLE 405
+ +N L+ F D+ +KP +V +++L+ N + E
Sbjct: 567 FVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLM----NAWSSVGDMKRCEE 622
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
+Y ML+ I P+ + + + + R G+
Sbjct: 623 IYTDMLEGGIDPDIHAFSILAKGYARAGE------------------------------- 651
Query: 466 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQ 525
P+ A +++ +M K V P VV Y+ +ISG+ EM A +++
Sbjct: 652 ----PEKAEQILNQMRKFGVRPNVVIYTQIISGWCS------------AGEMKKAMQVYK 695
Query: 526 EMSRI-GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 584
+M I G PNL TY LI GF + A +L +M+ K + P T ++ +
Sbjct: 696 KMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSI 755
Query: 585 G 585
G
Sbjct: 756 G 756
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/523 (19%), Positives = 211/523 (40%), Gaps = 42/523 (8%)
Query: 109 KKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRD----------------IVG 152
K+F + +++ G+ + ++ F AG++ E ++L++ +
Sbjct: 301 KEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAA 360
Query: 153 YCKCDDSFEQFSTLLDLPHHSVL----VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELH 208
Y + S E + + V+ + +I + + A ++F S K G +
Sbjct: 361 YVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPN 420
Query: 209 IRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS-CGDIRLAAEILGKIY 267
+ N +L L + G PN T+ M++ CG+ + + + +++
Sbjct: 421 TCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMD-KFVNRVF 479
Query: 268 RS----GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQR 323
R G P T+ T I CG A K+ ++ +NA+++ ++
Sbjct: 480 REMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARK 539
Query: 324 GAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNY 383
G V+ +MKS P SY+++L + K G+ QI PS +
Sbjct: 540 GDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLL 599
Query: 384 TSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLE 443
+L LL K + +++ ++ ++ +P+ +I N +L + R + +A +LE
Sbjct: 600 RTL-LLANFKCRALAGSERAFTLFK---KHGYKPDMVIFNSMLSIFTRNNMYDQAEGILE 655
Query: 444 DFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ 503
E G++ + +YN ++ M + A E++ + K + P +V+Y+T+I GF +
Sbjct: 656 SIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRG 715
Query: 504 SNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 563
M A + EM+ G P ++TY + G+ + + + M
Sbjct: 716 L------------MQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMA 763
Query: 564 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 606
+ P+ +T+ +++ Y + G+ E ++K DD
Sbjct: 764 KNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCFDD 806
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 142/320 (44%), Gaps = 17/320 (5%)
Query: 281 YIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSR 340
++R L VA KL+ K+ + + L+ + ++H + + G +A+++ E MK
Sbjct: 181 FVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMG 240
Query: 341 TFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ-IKPSIVNYTSLILLCKNKLKGQQL 399
P + +YN++L+ F K G + +K ++++ C + L
Sbjct: 241 PSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAR----EGL 296
Query: 400 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 459
++ E + + P T+ N +L+V + G + EAL++L++ E + +YNE
Sbjct: 297 LREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNE 356
Query: 460 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNV 519
++ + + K A ++ M K+ V+P + Y+T+I + K E
Sbjct: 357 LVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDE------------ 404
Query: 520 ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 579
A LF M GC+PN TY ++ K + ++ +MK G P+ T+ ++A
Sbjct: 405 ALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA 464
Query: 580 WYHKHGRIGEKNKLFGEMKA 599
G N++F EMK+
Sbjct: 465 LCGNKGMDKFVNRVFREMKS 484
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 109/524 (20%), Positives = 200/524 (38%), Gaps = 48/524 (9%)
Query: 118 HGFSHSVNYFRIIIHTFAMAGMH----LEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHS 173
H +S + Y + I M M L + ++ D+ G K S+ + +LD
Sbjct: 218 HAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFG--KMGRSWRKILGVLDEMRSK 275
Query: 174 VLVFN-----VLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXX 228
L F+ ++ A +L A + F K+ G E + N LL+
Sbjct: 276 GLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEA 335
Query: 229 XXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRG 284
+ E + TY +++ G + AA ++ + + G P +TY T I
Sbjct: 336 LSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDA 395
Query: 285 LCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 344
+ G D A KL + N+ +NAV+ ++ NE +++L +MKS+ P+
Sbjct: 396 YGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPN 455
Query: 345 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL---CKNKLKGQQLYD 401
++N +L KG C +P + +LI C +++ ++Y
Sbjct: 456 RATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYG 515
Query: 402 KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYN--- 458
+ M + N +L R+G +R ++ D +G + SY+
Sbjct: 516 E-------MTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML 568
Query: 459 ------------EIIHMICKES--YPKMAL--ELMPRMLKRNVLPGVVNYSTLIS--GFA 500
E I KE +P L L+ K L G TL G+
Sbjct: 569 QCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYK 628
Query: 501 KEQSNFEMVERLFTRE--MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQL 558
+ F + +FTR + A + + + G P+L TY L+D + + A ++
Sbjct: 629 PDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEI 688
Query: 559 FDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
+++ + PD+V+Y +I + + G + E ++ EM I
Sbjct: 689 LKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGI 732
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/475 (23%), Positives = 185/475 (38%), Gaps = 62/475 (13%)
Query: 140 HLEVFALLRDIVGYCKCDDSFEQFSTLL---DLPHHSVLVFNVLIKVFASNSMLEHAHQV 196
+LE + L D++ K D S+ + + P +V N LIK F M+E V
Sbjct: 151 NLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPM-TVSAANALIKSFGKLGMVEELLWV 209
Query: 197 FVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPL-PNIHTYTIMMS--- 252
+ K G+E + + NFL+ L +ME+G + P+I TY M+
Sbjct: 210 WRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFE-VMESGRIKPDIVTYNTMIKGYC 268
Query: 253 -CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSH 311
G + A E L + G +TY T I+ L +++ K + H
Sbjct: 269 KAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPH 328
Query: 312 CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 371
F+ VI G C+ G +NE V E M + P+V Y +L++ + K G V
Sbjct: 329 AFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSV---------- 378
Query: 372 XXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 431
+ ++ + + M+ +P+ + + ++ C+
Sbjct: 379 -----------------------------EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCK 409
Query: 432 EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 491
G+ EAL G+ +N Y+ +I + K A L M ++
Sbjct: 410 NGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYC 469
Query: 492 YSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI-GCLPNLYTYTCLIDGFCKID 550
Y+ LI F K R+++ A ALF+ M GC +YTYT L+ G K
Sbjct: 470 YNALIDAFTKH------------RKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEH 517
Query: 551 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
+ A +L+D M KGI P + L G++ K+ E+ ++LD
Sbjct: 518 RNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILD 572
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 97/227 (42%), Gaps = 34/227 (14%)
Query: 417 PNTI-ICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 475
P T+ N +++ + G E L + E GI Y+YN +++ + + A
Sbjct: 184 PMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAER 243
Query: 476 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRE-------------MNVAC- 521
+ M + P +V Y+T+I G+ K + +E+L E M AC
Sbjct: 244 VFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACY 303
Query: 522 ---------ALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
AL+QEM G + ++ +I G CK ++ +F+ M RKG P+V
Sbjct: 304 ADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVA 363
Query: 573 TYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKLQDPKLVQF 619
YTVLI Y K G + + +L M +D+G K P +V +
Sbjct: 364 IYTVLIDGYAKSGSVEDAIRLLHRM------IDEGFK----PDVVTY 400
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 161/384 (41%), Gaps = 23/384 (5%)
Query: 235 LMETGPLPNIHTYTIMMSCG----DIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
LM+ G PN TY+ ++ A ++L +I GG P +V+Y + G C+ G
Sbjct: 202 LMQKGLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGR 261
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
D A L R+L K N +N ++ C G EA +L EM P V +YN+
Sbjct: 262 TDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNI 321
Query: 351 LLN--AFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVY 407
L+N AF + + Q + + +Y +I LCK + D ++
Sbjct: 322 LINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCK-----EGKVDLVVKCL 376
Query: 408 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 467
+ M+ +PN N I + + +EA +++ + Y +I +C++
Sbjct: 377 DEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRK 436
Query: 468 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEM 527
A +L+ M + P YS LI G +E +FT M V ++ +E
Sbjct: 437 GNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLC--------LEGMFTGAMEV-LSIMEES 487
Query: 528 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 587
C P + + +I G CKI DLA ++F+ M K P+ TY +L+ +
Sbjct: 488 EN--CKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDEL 545
Query: 588 GEKNKLFGEMKANCILLDDGIKKL 611
++ E++ ++ + + ++
Sbjct: 546 ELAKEVLDELRLRKVIGQNAVDRI 569
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 105/225 (46%), Gaps = 20/225 (8%)
Query: 377 KPSIVNYTSLIL-LCK-NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQ 434
KP++ + T L+ LCK N+LK K++ V M+ + I P+ +++ C+ G
Sbjct: 103 KPNVAHSTQLLYDLCKANRLK------KAIRVIELMVSSGIIPDASAYTYLVNQLCKRGN 156
Query: 435 FREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYST 494
A+ L+E + G N +YN ++ +C +L+ + R++++ + P YS
Sbjct: 157 VGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSF 216
Query: 495 LISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDL 554
L+ KE+ E V+ L E+ G PNL +Y L+ GFCK D
Sbjct: 217 LLEAAYKERGTDEAVK------------LLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDD 264
Query: 555 ATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 599
A LF E+ KG +VV+Y +L+ GR E N L EM
Sbjct: 265 AMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDG 309
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 18/194 (9%)
Query: 409 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 468
S++ +PN +L C+ + ++A+ ++E GI + +Y +++ +CK
Sbjct: 96 SLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRG 155
Query: 469 YPKMALELMPRMLKRNVLPGVVNYSTLISGF---AKEQSNFEMVERLFTREMNVACALFQ 525
A++L+ +M V Y+ L+ G + + VERL +
Sbjct: 156 NVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK---------- 205
Query: 526 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
G PN +TY+ L++ K D A +L DE+ KG P++V+Y VL+ + K G
Sbjct: 206 -----GLAPNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEG 260
Query: 586 RIGEKNKLFGEMKA 599
R + LF E+ A
Sbjct: 261 RTDDAMALFRELPA 274
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 130/341 (38%), Gaps = 52/341 (15%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
+++ +NVL+ F + A +F G + ++ S N LL+CL
Sbjct: 245 NLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLL 304
Query: 233 XXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGN----PTVVTYGTYIRG 284
+ P++ TY I+++ G A ++L ++ S GN T +Y I
Sbjct: 305 AEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEM--SKGNHQFRVTATSYNPVIAR 362
Query: 285 LCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGA-VNEALEVLEEMKSSRTFP 343
LC+ G VD+ K + ++ + N +NA I C+ + V EA +++ + + +
Sbjct: 363 LCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQKCC 421
Query: 344 DVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKS 403
Y ++ + C+KG+ C P Y++LI
Sbjct: 422 THDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALI---------------- 465
Query: 404 LEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHE-QGINLNQYSYNEIIH 462
R C EG F A+ +L E + ++N +I
Sbjct: 466 -----------------------RGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMIL 502
Query: 463 MICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ 503
+CK +A+E+ M+++ +P Y+ L+ G A E
Sbjct: 503 GLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHED 543
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 139/301 (46%), Gaps = 24/301 (7%)
Query: 309 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK--KGDVXXXXX 366
N +N V++G+ + G +++AL + M R PDV ++N+L+N +C+ K D+
Sbjct: 192 NVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLF 251
Query: 367 XXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNH 424
C+ P++V++ +LI L K+ ++ +++ M++ R + C
Sbjct: 252 REMKEKGCE--PNVVSFNTLIRGFLSSGKI------EEGVKMAYEMIELGCRFSEATCEI 303
Query: 425 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 484
++ CREG+ +A L+ D + + +++ Y ++ +C E+ A+E+M + K+
Sbjct: 304 LVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKG 363
Query: 485 VLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLID 544
P + +TL+ G K + A ++M G LP+ T+ L+
Sbjct: 364 QTPCFIACTTLVEGLRK------------SGRTEKASGFMEKMMNAGILPDSVTFNLLLR 411
Query: 545 GFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILL 604
C D+ A +L KG PD TY VL++ + K GR E L EM +L
Sbjct: 412 DLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLP 471
Query: 605 D 605
D
Sbjct: 472 D 472
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 124/309 (40%), Gaps = 20/309 (6%)
Query: 242 PNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 297
PN+ Y +++ GD+ A ++ + P V T+ I G C D+A L
Sbjct: 191 PNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDL 250
Query: 298 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 357
R++ K N FN +I GF G + E +++ EM + +L++ C+
Sbjct: 251 FREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCR 310
Query: 358 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 417
+G V ++ PS +Y SL+ KL G+ +++E+ + + P
Sbjct: 311 EGRVDDACGLVLDLLNKRVLPSEFDYGSLV----EKLCGENKAVRAMEMMEELWKKGQTP 366
Query: 418 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
I C ++ + G+ +A +E GI + ++N ++ +C + A L
Sbjct: 367 CFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLR 426
Query: 478 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLY 537
+ P Y L+SGF KE E L EM LP+++
Sbjct: 427 LLASSKGYEPDETTYHVLVSGFTKEGRRKE------------GEVLVNEMLDKDMLPDIF 474
Query: 538 TYTCLIDGF 546
TY L+DG
Sbjct: 475 TYNRLMDGL 483
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 22/151 (14%)
Query: 466 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQ 525
K Y +A + M R++ P V Y+T+++G+ K + +M+ A +Q
Sbjct: 172 KMDYALLAFDTMKRLIDGK--PNVGVYNTVVNGYVK------------SGDMDKALRFYQ 217
Query: 526 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
M + P++ T+ LI+G+C+ DLA LF EMK KG P+VV++ LI + G
Sbjct: 218 RMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSG 277
Query: 586 RIGEKNKLFGEM--------KANCILLDDGI 608
+I E K+ EM +A C +L DG+
Sbjct: 278 KIEEGVKMAYEMIELGCRFSEATCEILVDGL 308
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/360 (22%), Positives = 162/360 (45%), Gaps = 22/360 (6%)
Query: 243 NIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 298
+I T+TI++ G A ++ G P + + I L A
Sbjct: 185 SIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFF 244
Query: 299 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
L + P + + ++ G+C+ G ++EA +V +EMK + P+VY+Y+++++A C+
Sbjct: 245 DSLKDRFEP-DVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRC 303
Query: 359 GDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 418
G + P+ + + +L+ + +K + +K L+VYN M + P+
Sbjct: 304 GQISRAHDVFADMLDSGCAPNAITFNNLMRV---HVKAGRT-EKVLQVYNQMKKLGCEPD 359
Query: 419 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMP 478
TI N ++ HCR+ A+ +L ++ +N ++N I I K+ A +
Sbjct: 360 TITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYS 419
Query: 479 RMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYT 538
+M++ P V Y+ L+ F +S ++ + +EM PN+ T
Sbjct: 420 KMMEAKCEPNTVTYNILMRMFVGSKST------------DMVLKMKKEMDDKEVEPNVNT 467
Query: 539 YTCLIDGFCKIDYIDLATQLFDEM-KRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
Y L+ FC + + + A +LF EM + K + P + Y +++A + G++ + +L +M
Sbjct: 468 YRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKM 527
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/353 (17%), Positives = 144/353 (40%), Gaps = 30/353 (8%)
Query: 123 SVNYFRIIIHTFAMAGM---------HLEVFALLRDIVGYC----------KCDDSFEQF 163
S+ F I+I + AG+ +E + + D + + + ++ F
Sbjct: 185 SIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFF 244
Query: 164 STLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXX 223
+L D V+V+ L++ + + A +VF K G+E ++ + + ++ L
Sbjct: 245 DSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCG 304
Query: 224 XXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYG 279
++++G PN T+ +M G ++ ++ + G P +TY
Sbjct: 305 QISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYN 364
Query: 280 TYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSS 339
I C ++ A K++ + K +N+ FN + ++ VN A + +M +
Sbjct: 365 FLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEA 424
Query: 340 RTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQ 398
+ P+ +YN+L+ F +++P++ Y L+ + C G
Sbjct: 425 KCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFC-----GMG 479
Query: 399 LYDKSLEVYNSMLQNA-IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 450
++ + +++ M++ + P+ + +L R GQ ++ L+E ++G+
Sbjct: 480 HWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQKGL 532
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 81/174 (46%), Gaps = 13/174 (7%)
Query: 425 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 484
++R + R G EA+ + G ++ +++ +I + ++ A LK
Sbjct: 192 LIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDS-LKDR 250
Query: 485 VLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLID 544
P V+ Y+ L+ G+ + E++ A +F+EM G PN+YTY+ +ID
Sbjct: 251 FEPDVIVYTNLVRGWCR------------AGEISEAEKVFKEMKLAGIEPNVYTYSIVID 298
Query: 545 GFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
C+ I A +F +M G P+ +T+ L+ + K GR + +++ +MK
Sbjct: 299 ALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMK 352
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 13/144 (9%)
Query: 455 YSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFT 514
+ YNE+I + K +A L+ M RNV + ++ LI + + E V
Sbjct: 152 HPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVH---- 207
Query: 515 REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTY 574
F M GC+P+ ++ +I + A FD +K + PDV+ Y
Sbjct: 208 --------CFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR-FEPDVIVY 258
Query: 575 TVLIAWYHKHGRIGEKNKLFGEMK 598
T L+ + + G I E K+F EMK
Sbjct: 259 TNLVRGWCRAGEISEAEKVFKEMK 282
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 160/338 (47%), Gaps = 38/338 (11%)
Query: 239 GPLPNIHTYTIMMS--C--GDIRLAAEILGKIYRSG-GNPTVVTYGTYIRGLCECGY--- 290
G PN + I++ C GDI A ++ ++ RSG P +TY T L +C +
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYST----LMDCLFAHS 246
Query: 291 -----VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDV 345
V++ ++ K P+ FN +I+GFC+ G V A ++L+ MK + P+V
Sbjct: 247 RSKEAVELFEDMISKEGISPDPVT---FNVMINGFCRAGEVERAKKILDFMKKNGCNPNV 303
Query: 346 YSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSL 404
Y+Y+ L+N FCK G + +K V YT+L+ C+N G+ D+++
Sbjct: 304 YNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRN---GET--DEAM 358
Query: 405 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
++ M + R +T+ N ILR EG+ EAL +L+ + +G++LN+ SY I++ +
Sbjct: 359 KLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNAL 418
Query: 465 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALF 524
C + A++ + M +R + P ++ L+ + E +T + +
Sbjct: 419 CCNGELEKAVKFLSVMSERGIWPHHATWNELV---------VRLCESGYTE---IGVRVL 466
Query: 525 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM 562
RIG +P ++ +++ CK + +L D +
Sbjct: 467 IGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSL 504
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/189 (33%), Positives = 102/189 (53%), Gaps = 14/189 (7%)
Query: 414 AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL-NQYSYNEIIHMICKESYPKM 472
++PNT I N +++ HC+ G A ++E+ GI+ N +Y+ ++ + S K
Sbjct: 191 GLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKE 250
Query: 473 ALELMPRML-KRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIG 531
A+EL M+ K + P V ++ +I+GF + VER A + M + G
Sbjct: 251 AVELFEDMISKEGISPDPVTFNVMINGFCRAGE----VER--------AKKILDFMKKNG 298
Query: 532 CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKN 591
C PN+Y Y+ L++GFCK+ I A Q FDE+K+ G+ D V YT L+ + ++G E
Sbjct: 299 CNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAM 358
Query: 592 KLFGEMKAN 600
KL GEMKA+
Sbjct: 359 KLLGEMKAS 367
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/314 (21%), Positives = 136/314 (43%), Gaps = 14/314 (4%)
Query: 176 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLEL-HIRSCNFLLKCLXXXXXXXXXXXXXXX 234
+FN+L+K N + A V K G+ + + + L+ CL
Sbjct: 198 IFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFED 257
Query: 235 LM-ETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECG 289
++ + G P+ T+ +M++ G++ A +IL + ++G NP V Y + G C+ G
Sbjct: 258 MISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVG 317
Query: 290 YVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 349
+ A + ++ L++ + +++ FC+ G +EA+++L EMK+SR D +YN
Sbjct: 318 KIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYN 377
Query: 350 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLEVY 407
++L +G + + +Y ++ L C +L +K+++
Sbjct: 378 VILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGEL------EKAVKFL 431
Query: 408 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 467
+ M + I P+ N ++ C G + +L F G+ S+ ++ ICKE
Sbjct: 432 SVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKE 491
Query: 468 SYPKMALELMPRML 481
EL+ ++
Sbjct: 492 RKLVHVFELLDSLV 505
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 13/192 (6%)
Query: 417 PNTIICNHILRVHCREGQFREALTLLEDF-HEQGINLNQYSYNEIIHMICKESYPKMALE 475
PN+I + ++ + +EA+ L ED ++GI+ + ++N +I+ C+ + A +
Sbjct: 230 PNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKK 289
Query: 476 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPN 535
++ M K P V NYS L++GF K ++ A F E+ + G +
Sbjct: 290 ILDFMKKNGCNPNVYNYSALMNGFCK------------VGKIQEAKQTFDEVKKTGLKLD 337
Query: 536 LYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFG 595
YT L++ FC+ D A +L EMK D +TY V++ GR E ++
Sbjct: 338 TVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLD 397
Query: 596 EMKANCILLDDG 607
+ + + L+ G
Sbjct: 398 QWGSEGVHLNKG 409
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 131/282 (46%), Gaps = 21/282 (7%)
Query: 316 VIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDV-XXXXXXXXXXXXC 374
+ C+ G V+EA ++++E+ + PD Y+YN LL CK D+
Sbjct: 165 AVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDF 224
Query: 375 QIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNA-IRPNTIICNHILRVHCRE 432
+KP +V++T LI +C +K + +Y S L NA +P+ + N I++ C
Sbjct: 225 DVKPDLVSFTILIDNVCNSKNLREAMY------LVSKLGNAGFKPDCFLYNTIMKGFCTL 278
Query: 433 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 492
+ EA+ + + E+G+ +Q +YN +I + K + A + M+ P Y
Sbjct: 279 SKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATY 338
Query: 493 STLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 552
++L++G ++ + A +L +EM GC PN TY L+ G CK +
Sbjct: 339 TSLMNGMCRKGESLG------------ALSLLEEMEARGCAPNDCTYNTLLHGLCKARLM 386
Query: 553 DLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
D +L++ MK G+ + Y L+ K G++ E ++F
Sbjct: 387 DKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 13/185 (7%)
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
V N M+ N + P+ + + +R C G+ EA L+++ E+ + Y+YN ++ +C
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 466 KESYPKMALELMPRMLKR-NVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALF 524
K + E + M +V P +V+++ LI ++ + A L
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCN------------SKNLREAMYLV 253
Query: 525 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 584
++ G P+ + Y ++ GFC + A ++ +MK +G+ PD +TY LI K
Sbjct: 254 SKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKA 313
Query: 585 GRIGE 589
GR+ E
Sbjct: 314 GRVEE 318
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 109/260 (41%), Gaps = 9/260 (3%)
Query: 254 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLH-PLNSHC 312
G + A +++ ++ P TY ++ LC+C + V ++ V ++ +
Sbjct: 173 GRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVS 232
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
F +I C + EA+ ++ ++ ++ PD + YN ++ FC
Sbjct: 233 FTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMK 292
Query: 373 XCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 430
++P + Y +LI L +++ ++Y K +M+ P+T ++ C
Sbjct: 293 EEGVEPDQITYNTLIFGLSKAGRVEEARMYLK------TMVDAGYEPDTATYTSLMNGMC 346
Query: 431 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 490
R+G+ AL+LLE+ +G N +YN ++H +CK +EL M V
Sbjct: 347 RKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESN 406
Query: 491 NYSTLISGFAKEQSNFEMVE 510
Y+TL+ K E E
Sbjct: 407 GYATLVRSLVKSGKVAEAYE 426
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 248 TIMMSCGDIRLAAEILG---KIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCK 304
TIM + +E +G K+ G P +TY T I GL + G V+ A ++ +
Sbjct: 270 TIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDA 329
Query: 305 LHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 357
+ ++ + ++++G C++G AL +LEEM++ P+ +YN LL+ CK
Sbjct: 330 GYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCK 382
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 77/181 (42%), Gaps = 4/181 (2%)
Query: 175 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 234
++N ++K F + S A V+ K G+E + N L+ L
Sbjct: 266 FLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKT 325
Query: 235 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
+++ G P+ TYT +M+ G+ A +L ++ G P TY T + GLC+
Sbjct: 326 MVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARL 385
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
+D +L + L S+ + ++ + G V EA EV + S++ D +Y+
Sbjct: 386 MDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYST 445
Query: 351 L 351
L
Sbjct: 446 L 446
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 85/222 (38%), Gaps = 19/222 (8%)
Query: 154 CKC----------DDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNV 203
CKC D+ + F DL + F +LI ++ L A + N
Sbjct: 205 CKCKDLHVVYEFVDEMRDDFDVKPDL-----VSFTILIDNVCNSKNLREAMYLVSKLGNA 259
Query: 204 GLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLA 259
G + N ++K + E G P+ TY ++ G + A
Sbjct: 260 GFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEA 319
Query: 260 AEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHG 319
L + +G P TY + + G+C G A L+ ++ + N +N ++HG
Sbjct: 320 RMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHG 379
Query: 320 FCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDV 361
C+ +++ +E+ E MKSS + Y L+ + K G V
Sbjct: 380 LCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKV 421
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 174/430 (40%), Gaps = 67/430 (15%)
Query: 176 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 235
+ ++I+ + A +F GL L++ N L++ L +
Sbjct: 272 TYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRM 331
Query: 236 METGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGG----NPTVVTYGTY---IRGLCEC 288
+ETG PN +TY+++++ L AE G++ R G + +T G Y +R L +
Sbjct: 332 VETGCRPNEYTYSLLLNL----LVAE--GQLVRLDGVVEISKRYMTQGIYSYLVRTLSKL 385
Query: 289 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 348
G+V AH+L + + +++ C G EA+E+L ++ D Y
Sbjct: 386 GHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMMY 445
Query: 349 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYN 408
N + +A K + ++D ++
Sbjct: 446 NTVFSALGKLKQI-----------------------------------SHIHD----LFE 466
Query: 409 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 468
M ++ P+ N ++ R G+ EA+ + E+ + SYN +I+ + K
Sbjct: 467 KMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNG 526
Query: 469 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMS 528
A M ++ + P VV YSTL+ F K T + +A +LF+EM
Sbjct: 527 DVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGK------------TERVEMAYSLFEEML 574
Query: 529 RIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTV---LIAWYHKHG 585
GC PN+ TY L+D K A L+ +MK++G+ PD +TYTV L + H
Sbjct: 575 VKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPDSITYTVLERLQSVSHGKS 634
Query: 586 RIGEKNKLFG 595
RI KN + G
Sbjct: 635 RIRRKNPITG 644
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/352 (24%), Positives = 152/352 (43%), Gaps = 30/352 (8%)
Query: 277 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 336
TY IR + G D A L ++ + LN +N ++ + V++A++V M
Sbjct: 272 TYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRM 331
Query: 337 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 396
+ P+ Y+Y++LLN +G + + I +Y L +KL
Sbjct: 332 VETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQ-GIYSYLVRTL---SKLGH 387
Query: 397 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 456
++ ++ M ++ +L C G+ EA+ +L HE+G+ +
Sbjct: 388 ---VSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMM 444
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK-----EQSN-FEMVE 510
YN + + K +L +M K P + Y+ LI+ F + E N FE +E
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 511 RLFTR-----------------EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 553
R + +++ A F+EM G P++ TY+ L++ F K + ++
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTLMECFGKTERVE 564
Query: 554 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
+A LF+EM KG P++VTY +L+ K+GR E L+ +MK + D
Sbjct: 565 MAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKMKQQGLTPD 616
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/368 (20%), Positives = 150/368 (40%), Gaps = 85/368 (23%)
Query: 296 KLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAF 355
+LV+K K+ NS + ++ + + ++A +V E++ D+++YNMLL+A
Sbjct: 192 RLVKKWDLKM---NSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDAL 248
Query: 356 CKK--------------------------------GDVXXXXXXXXXXXXCQIKPSIVNY 383
K G + ++V Y
Sbjct: 249 AKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGY 308
Query: 384 TSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTI---------------------- 420
+L+ +L K K + DK+++V++ M++ RPN
Sbjct: 309 NTLMQVLAKGK-----MVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVV 363
Query: 421 ----------ICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
I ++++R + G EA L D + + SY ++ +C
Sbjct: 364 EISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKT 423
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI 530
A+E++ ++ ++ V+ + Y+T+ S K ++++ LF++M +
Sbjct: 424 IEAIEMLSKIHEKGVVTDTMMYNTVFSALGK------------LKQISHIHDLFEKMKKD 471
Query: 531 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 590
G P+++TY LI F ++ +D A +F+E++R PD+++Y LI K+G + E
Sbjct: 472 GPSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEA 531
Query: 591 NKLFGEMK 598
+ F EM+
Sbjct: 532 HVRFKEMQ 539
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/212 (19%), Positives = 93/212 (43%), Gaps = 20/212 (9%)
Query: 386 LILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 445
+++L ++ L + +D+ + +SM+++ + N N ++ + L L++ +
Sbjct: 140 ILILSRSNLPDR--FDRVRSILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKW 197
Query: 446 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN 505
+ +N ++Y ++ + A ++ + + + Y+ L+ AK++
Sbjct: 198 D---LKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEK- 253
Query: 506 FEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK 565
AC +F++M + C + YTYT +I +I D A LF+EM +
Sbjct: 254 --------------ACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITE 299
Query: 566 GIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
G+ +VV Y L+ K + + ++F M
Sbjct: 300 GLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRM 331
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 108/507 (21%), Positives = 204/507 (40%), Gaps = 55/507 (10%)
Query: 113 SWVETHG--FSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLP 170
SW++ H FS+ + Y I+IH + E F L Q TL
Sbjct: 155 SWLQKHNLCFSYELLY-SILIHALGRSEKLYEAFLL--------------SQKQTL---- 195
Query: 171 HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXX 230
+ L +N LI A N+ +E A + + G + + + +++ L
Sbjct: 196 --TPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVML 253
Query: 231 XXX-XLMETGPLP---NIHTYTIM--MSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRG 284
+E L + IM GD A ++LG +G + T + I
Sbjct: 254 LRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISA 313
Query: 285 LCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 344
L + G A L +L + +NA++ G+ + G + +A ++ EM+ PD
Sbjct: 314 LADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPD 373
Query: 345 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSL 404
++Y++L++A+ G ++P+ ++ L+ +++ + Q K+
Sbjct: 374 EHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQ----KTF 429
Query: 405 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
+V M ++P+ N ++ + A+T + +GI ++ ++N +I
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCH 489
Query: 465 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALF 524
CK +A E+ M +R LP Y+ +I+ + +Q ++ ++RL +
Sbjct: 490 CKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYG-DQERWDDMKRLLGK--------- 539
Query: 525 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 584
M G LPN+ T+T L+D + K + A + +EMK G+ P Y LI Y +
Sbjct: 540 --MKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQR 597
Query: 585 GRIGEKNKLFGEMKANC--ILLDDGIK 609
G E N ++ DG+K
Sbjct: 598 G--------LSEQAVNAFRVMTSDGLK 616
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/440 (20%), Positives = 171/440 (38%), Gaps = 47/440 (10%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
V + N +I FA + A Q+ A+ GL + ++ L
Sbjct: 268 DVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLEAEALF 327
Query: 233 XXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
L ++G P Y ++ G ++ A ++ ++ + G +P TY I
Sbjct: 328 EELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNA 387
Query: 289 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 348
G + A +++++ NS F+ ++ GF RG + +VL+EMKS PD Y
Sbjct: 388 GRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFY 447
Query: 349 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--------------------- 387
N++++ F K + I+P V + +LI
Sbjct: 448 NVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMER 507
Query: 388 ---LLCK-------NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFRE 437
L C N Q+ +D + M I PN + ++ V+ + G+F +
Sbjct: 508 RGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFND 567
Query: 438 ALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 497
A+ LE+ G+ + YN +I+ + + A+ M + P ++ ++LI+
Sbjct: 568 AIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLIN 627
Query: 498 GFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 557
F +++ + E A A+ Q M G P++ TYT L+ ++D
Sbjct: 628 AFGEDRRDAE------------AFAVLQYMKENGVKPDVVTYTTLMKALIRVDKFQKVPV 675
Query: 558 LFDEMKRKGIFPDVVTYTVL 577
+++EM G PD ++L
Sbjct: 676 VYEEMIMSGCKPDRKARSML 695
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 154/333 (46%), Gaps = 16/333 (4%)
Query: 273 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 332
P+V Y +R + D+AH L ++ + + + ++ +I F + G + AL
Sbjct: 153 PSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSW 212
Query: 333 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 392
L++M+ R D+ Y+ L+ + D I P +V Y S+I N
Sbjct: 213 LQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMI----N 268
Query: 393 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 452
+L+ ++ + M + + PNT+ + +L V+ +F EAL++ + E L
Sbjct: 269 VYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCAL 328
Query: 453 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 512
+ + N +I + + K A L + K ++ P VV+Y+T++ + + + L
Sbjct: 329 DLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAE--------L 380
Query: 513 FTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
F A LF+ M R N+ TY +I + K + AT L EM+ +GI P+ +
Sbjct: 381 FGE----AIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAI 436
Query: 573 TYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
TY+ +I+ + K G++ LF +++++ + +D
Sbjct: 437 TYSTIISIWGKAGKLDRAATLFQKLRSSGVEID 469
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/491 (17%), Positives = 202/491 (41%), Gaps = 36/491 (7%)
Query: 147 LRDIVGYCKCDDSFEQFSTLLDLPHH------SVLVFNVLIKVFASNSMLEHAHQVFVSA 200
+R +V ++ +++ LLD H SV +NV+++ + AH +F
Sbjct: 122 IRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEM 181
Query: 201 KNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCG----DI 256
+ L + + L+ + + ++ Y+ ++ D
Sbjct: 182 RQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDY 241
Query: 257 RLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAV 316
A I ++ RSG P +V Y + I + A L+++++ N+ ++ +
Sbjct: 242 SKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTL 301
Query: 317 IHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQI 376
+ + + EAL V EMK D+ + N++++ + + V I
Sbjct: 302 LSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDI 361
Query: 377 KPSIVNYTSLILLCKNKLKGQ-QLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 435
+P++V+Y +++ ++ G+ +L+ +++ ++ M + I N + N +++++ + +
Sbjct: 362 EPNVVSYNTIL-----RVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEH 416
Query: 436 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 495
+A L+++ +GI N +Y+ II + K A L ++ V V Y T+
Sbjct: 417 EKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTM 476
Query: 496 I--------SGFAKEQSNFEMVERLFTREMNV-----------ACALFQEMSRIGCLPNL 536
I G AK + + RE + A +F++ G + ++
Sbjct: 477 IVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDI 536
Query: 537 YTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE 596
+ C+I+ + + ++F++M+ G FPD +++ Y K + + ++ E
Sbjct: 537 SVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYRE 596
Query: 597 MKAN-CILLDD 606
M+ C+ D+
Sbjct: 597 MQEEGCVFPDE 607
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/402 (18%), Positives = 146/402 (36%), Gaps = 68/402 (16%)
Query: 178 NVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLME 237
N++I V+ M++ A ++F S + + +E ++ S N +L+ +
Sbjct: 334 NIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQR 393
Query: 238 TGPLPNIHTYTIMMSCGDIRL----AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDV 293
N+ TY M+ + A ++ ++ G P +TY T I + G +D
Sbjct: 394 KDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDR 453
Query: 294 AHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLN 353
A L +KL ++ + +I + + G + A +L E+K PD +
Sbjct: 454 AATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELK----LPDNIPRETAIT 509
Query: 354 AFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQN 413
K G I + +I N Q Y +EV+ M
Sbjct: 510 ILAKAGRTEEATWVFRQAFESGEVKDISVFGCMI----NLYSRNQRYVNVIEVFEKMRTA 565
Query: 414 AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMA 473
P++ + +L + ++ +F +A T+ + E+G C
Sbjct: 566 GYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEG---------------C-------- 602
Query: 474 LELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCL 533
V P V++ L + +FEMVE LF R+
Sbjct: 603 -----------VFPDEVHFQML--SLYSSKKDFEMVESLF--------------QRLESD 635
Query: 534 PNLYT---YTCLIDGFCKIDYIDLATQLFDEMKRKGI---FP 569
PN+ + + + + + D ++ A+++ + M+ +GI FP
Sbjct: 636 PNVNSKELHLVVAALYERADKLNDASRVMNRMRERGILKPFP 677
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 159/370 (42%), Gaps = 22/370 (5%)
Query: 242 PNIHTYTIMMSC----GDIRLAAEILGKIY--RSGGNPTVVTYGTYIRGLCECGYVDVAH 295
P+ T+ I++ C G A ++ + R+ P VVT+ + + G ++
Sbjct: 281 PDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCR 340
Query: 296 KLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAF 355
+ + + N +NA++ + G AL VL ++K + PDV SY LLN++
Sbjct: 341 AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 400
Query: 356 CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAI 415
+ + KP++V Y +LI + +++E++ M Q+ I
Sbjct: 401 GRSRQPGKAKEVFLMMRKERRKPNVVTYNALI----DAYGSNGFLAEAVEIFRQMEQDGI 456
Query: 416 RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 475
+PN + +L R + T+L +GINLN +YN I + + A+
Sbjct: 457 KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIA 516
Query: 476 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPN 535
L M K+ V V ++ LISG + E A + +EM +
Sbjct: 517 LYQSMRKKKVKADSVTFTILISGSCRMSKYPE------------AISYLKEMEDLSIPLT 564
Query: 536 LYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFG 595
Y+ ++ + K + A +F++MK G PDV+ YT ++ Y+ + G+ +LF
Sbjct: 565 KEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFL 624
Query: 596 EMKANCILLD 605
EM+AN I D
Sbjct: 625 EMEANGIEPD 634
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 151/337 (44%), Gaps = 30/337 (8%)
Query: 278 YGTYIRGLCECGYVDVAHKL---VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 334
Y IR +VD A L ++K CK ++ ++A+I+ + G A+ +++
Sbjct: 146 YNMMIRLHARHNWVDQARGLFFEMQKWSCKP---DAETYDALINAHGRAGQWRWAMNLMD 202
Query: 335 EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKL 394
+M + P +YN L+NA G+ + P +V + ++ K+
Sbjct: 203 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKS-- 260
Query: 395 KGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL-- 452
G+Q Y K+L + M +RP+T N I+ + GQ +AL L E+
Sbjct: 261 -GRQ-YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRP 318
Query: 453 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 512
+ ++ I+H+ + + + M+ + P +V+Y+ L+ +A +
Sbjct: 319 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS------- 371
Query: 513 FTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
A ++ ++ + G +P++ +YTCL++ + + A ++F M+++ P+VV
Sbjct: 372 -----GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVV 426
Query: 573 TYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIK 609
TY LI Y +G + E ++F +M+ DGIK
Sbjct: 427 TYNALIDAYGSNGFLAEAVEIFRQME------QDGIK 457
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/368 (21%), Positives = 147/368 (39%), Gaps = 35/368 (9%)
Query: 242 PNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 297
P+ TY +++ G R A ++ + R+ P+ TY I G A ++
Sbjct: 176 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 235
Query: 298 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 357
+K+ + N V+ + ++AL E MK ++ PD ++N+++ K
Sbjct: 236 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 295
Query: 358 KGDVXXXXX--XXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAI 415
G + +P +V +TS++ L +KG+ + V+ +M+ +
Sbjct: 296 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYS--VKGE--IENCRAVFEAMVAEGL 351
Query: 416 RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 475
+PN + N ++ + G AL++L D + GI + SY +++ + P A E
Sbjct: 352 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 411
Query: 476 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE------------------------R 511
+ M K P VV Y+ LI + E VE
Sbjct: 412 VFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS 471
Query: 512 LFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 571
+++NV L SR G N Y I + ++ A L+ M++K + D
Sbjct: 472 RSKKKVNVDTVLSAAQSR-GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS 530
Query: 572 VTYTVLIA 579
VT+T+LI+
Sbjct: 531 VTFTILIS 538
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 154/418 (36%), Gaps = 53/418 (12%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRS-CNFLLKCLXXXXXXXXXXXX 231
+V+ +N LI + SN L A ++F + G++ ++ S C L C
Sbjct: 424 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKV------ 477
Query: 232 XXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 291
N+ T +L G N Y + I +
Sbjct: 478 -----------NVDT---------------VLSAAQSRGINLNTAAYNSAIGSYINAAEL 511
Query: 292 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 351
+ A L + + K +S F +I G C+ EA+ L+EM+ Y+ +
Sbjct: 512 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSV 571
Query: 352 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML 411
L A+ K+G V +P ++ YTS++ + + + K+ E++ M
Sbjct: 572 LCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML----HAYNASEKWGKACELFLEME 627
Query: 412 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 471
N I P++I C+ ++R + GQ L++ E+ I + EI K
Sbjct: 628 ANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWK 687
Query: 472 MALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVAC--ALFQEMSR 529
A++L+ M LP +L G + + LF + V LF ++
Sbjct: 688 RAIDLIQMM--DPYLP------SLSIGLTNQ------MLHLFGKSGKVEAMMKLFYKIIA 733
Query: 530 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 587
G NL TY L++ + ++ + M GI P Y +I++ + I
Sbjct: 734 SGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGI 791
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 159/370 (42%), Gaps = 22/370 (5%)
Query: 242 PNIHTYTIMMSC----GDIRLAAEILGKIY--RSGGNPTVVTYGTYIRGLCECGYVDVAH 295
P+ T+ I++ C G A ++ + R+ P VVT+ + + G ++
Sbjct: 149 PDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCR 208
Query: 296 KLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAF 355
+ + + N +NA++ + G AL VL ++K + PDV SY LLN++
Sbjct: 209 AVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSY 268
Query: 356 CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAI 415
+ + KP++V Y +LI + +++E++ M Q+ I
Sbjct: 269 GRSRQPGKAKEVFLMMRKERRKPNVVTYNALI----DAYGSNGFLAEAVEIFRQMEQDGI 324
Query: 416 RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 475
+PN + +L R + T+L +GINLN +YN I + + A+
Sbjct: 325 KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIA 384
Query: 476 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPN 535
L M K+ V V ++ LISG + E A + +EM +
Sbjct: 385 LYQSMRKKKVKADSVTFTILISGSCRMSKYPE------------AISYLKEMEDLSIPLT 432
Query: 536 LYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFG 595
Y+ ++ + K + A +F++MK G PDV+ YT ++ Y+ + G+ +LF
Sbjct: 433 KEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFL 492
Query: 596 EMKANCILLD 605
EM+AN I D
Sbjct: 493 EMEANGIEPD 502
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 152/337 (45%), Gaps = 30/337 (8%)
Query: 278 YGTYIRGLCECGYVDVAHKL---VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 334
Y IR +VD A L ++K CK P ++ ++A+I+ + G A+ +++
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCK--P-DAETYDALINAHGRAGQWRWAMNLMD 70
Query: 335 EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKL 394
+M + P +YN L+NA G+ + P +V + ++ K+
Sbjct: 71 DMLRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKS-- 128
Query: 395 KGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL-- 452
G+Q Y K+L + M +RP+T N I+ + GQ +AL L E+
Sbjct: 129 -GRQ-YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRP 186
Query: 453 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 512
+ ++ I+H+ + + + M+ + P +V+Y+ L+ +A +
Sbjct: 187 DVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS------- 239
Query: 513 FTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
A ++ ++ + G +P++ +YTCL++ + + A ++F M+++ P+VV
Sbjct: 240 -----GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVV 294
Query: 573 TYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIK 609
TY LI Y +G + E ++F +M+ DGIK
Sbjct: 295 TYNALIDAYGSNGFLAEAVEIFRQME------QDGIK 325
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 153/387 (39%), Gaps = 35/387 (9%)
Query: 242 PNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 297
P+ TY +++ G R A ++ + R+ P+ TY I G A ++
Sbjct: 44 PDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV 103
Query: 298 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 357
+K+ + N V+ + ++AL E MK ++ PD ++N+++ K
Sbjct: 104 CKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSK 163
Query: 358 KGDVXXXXX--XXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAI 415
G + +P +V +TS++ L +KG+ + V+ +M+ +
Sbjct: 164 LGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYS--VKGE--IENCRAVFEAMVAEGL 219
Query: 416 RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 475
+PN + N ++ + G AL++L D + GI + SY +++ + P A E
Sbjct: 220 KPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKE 279
Query: 476 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE------------------------R 511
+ M K P VV Y+ LI + E VE
Sbjct: 280 VFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACS 339
Query: 512 LFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 571
+++NV L SR G N Y I + ++ A L+ M++K + D
Sbjct: 340 RSKKKVNVDTVLSAAQSR-GINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS 398
Query: 572 VTYTVLIAWYHKHGRIGEKNKLFGEMK 598
VT+T+LI+ + + E EM+
Sbjct: 399 VTFTILISGSCRMSKYPEAISYLKEME 425
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/439 (20%), Positives = 163/439 (37%), Gaps = 56/439 (12%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRS-CNFLLKCLXXXXXXXXXXXX 231
+V+ +N LI + SN L A ++F + G++ ++ S C L C
Sbjct: 292 NVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKV------ 345
Query: 232 XXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 291
N+ T +L G N Y + I +
Sbjct: 346 -----------NVDT---------------VLSAAQSRGINLNTAAYNSAIGSYINAAEL 379
Query: 292 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 351
+ A L + + K +S F +I G C+ EA+ L+EM+ Y+ +
Sbjct: 380 EKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSV 439
Query: 352 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML 411
L A+ K+G V +P ++ YTS++ + + + K+ E++ M
Sbjct: 440 LCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSML----HAYNASEKWGKACELFLEME 495
Query: 412 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 471
N I P++I C+ ++R + GQ L++ E+ I + EI K
Sbjct: 496 ANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWK 555
Query: 472 MALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVAC--ALFQEMSR 529
A++L+ M LP +L G + + LF + V LF ++
Sbjct: 556 RAIDLIQMM--DPYLP------SLSIGLTNQ------MLHLFGKSGKVEAMMKLFYKIIA 601
Query: 530 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 589
G NL TY L++ + ++ + M GI P Y +I++ + I
Sbjct: 602 SGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIEF 661
Query: 590 K---NKLFGEMKANCILLD 605
+ + GEM+ C + D
Sbjct: 662 EPLIRQKLGEMREECKIND 680
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/450 (21%), Positives = 180/450 (40%), Gaps = 72/450 (16%)
Query: 161 EQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLX 220
EQ T LD + FN +I F+ + +E A Q + K +GL + N L+K
Sbjct: 107 EQSGTKLD-----SIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYG 161
Query: 221 XXXXXXXXXXXXXXLMETGPL---PNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNP 273
++E G + PNI T+ +++ + A E++ K+ G P
Sbjct: 162 IAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRP 221
Query: 274 TVVTYGT----YI-RGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 328
VTY T Y+ +G +V K+V K K N V+ G+C+ G V +
Sbjct: 222 DTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAK---PNGRTCGIVVGGYCREGRVRD 278
Query: 329 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL 388
L + MK R ++ +N L+N F + D C +K ++ Y++++
Sbjct: 279 GLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVM- 337
Query: 389 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 448
N +K+ +V+ M++ ++P+
Sbjct: 338 ---NAWSSAGYMEKAAQVFKEMVKAGVKPDA----------------------------- 365
Query: 449 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEM 508
++Y+ + + PK A EL+ ++ + P VV ++T+ISG+ S
Sbjct: 366 ------HAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGS---- 414
Query: 509 VERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIF 568
M+ A +F +M + G PN+ T+ L+ G+ ++ A ++ M+ G+
Sbjct: 415 --------MDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVK 466
Query: 569 PDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
P+ T+ +L + G E NK +K
Sbjct: 467 PENSTFLLLAEAWRVAGLTDESNKAINALK 496
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/387 (20%), Positives = 167/387 (43%), Gaps = 53/387 (13%)
Query: 249 IMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPL 308
+++ G A + + +G P++++Y T + + +V ++ L
Sbjct: 54 VLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKL 113
Query: 309 NSHCFNAVIHGFCQRGAVNEALEVLEEMK------SSRTF-------------------- 342
+S FNAVI+ F + G + +A++ L +MK ++ T+
Sbjct: 114 DSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELL 173
Query: 343 ------------PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLC 390
P++ ++N+L+ A+CKK V C ++P V Y + I C
Sbjct: 174 DLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNT-IATC 232
Query: 391 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 450
+ KG+ + +S V +++ +PN C ++ +CREG+ R+ L + E +
Sbjct: 233 YVQ-KGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRV 291
Query: 451 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 510
N +N +I+ + E++ M + NV V+ YST+++ ++
Sbjct: 292 EANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSS--------- 342
Query: 511 RLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPD 570
M A +F+EM + G P+ + Y+ L G+ + A +L + + + P+
Sbjct: 343 ---AGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPN 398
Query: 571 VVTYTVLIAWYHKHGRIGEKNKLFGEM 597
VV +T +I+ + +G + + ++F +M
Sbjct: 399 VVIFTTVISGWCSNGSMDDAMRVFNKM 425
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 149/316 (47%), Gaps = 22/316 (6%)
Query: 256 IRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNA 315
++ A E+L ++ + G P +G + LC+ G V A K+ + K P N F +
Sbjct: 183 VKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFPP-NLRYFTS 241
Query: 316 VIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ 375
+++G+C+ G + EA EVL +MK + PD+ + LL+ + G +
Sbjct: 242 LLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRG 301
Query: 376 IKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQ 434
+P++ YT LI LC+ ++ D+++ V+ M + + + ++ C+ G
Sbjct: 302 FEPNVNCYTVLIQALCRT----EKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGM 357
Query: 435 FREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYST 494
+ ++L+D ++G+ +Q +Y +I+ K+ + LEL+ +M +R P ++ Y+
Sbjct: 358 IDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNV 417
Query: 495 LISGFAKEQSNFEMVERLFTR--EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 552
+I RL + E+ A L+ EM G P + T+ +I+GF ++
Sbjct: 418 VI--------------RLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFL 463
Query: 553 DLATQLFDEMKRKGIF 568
A F EM +GIF
Sbjct: 464 IEACNHFKEMVSRGIF 479
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 139/290 (47%), Gaps = 20/290 (6%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
F ++ F V +A+EVL+EM PD Y + LL+A CK G V
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR 229
Query: 373 XCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 431
+ P++ +TSL+ C+ +G+ + K EV M + + P+ ++ ++L +
Sbjct: 230 E-KFPPNLRYFTSLLYGWCR---EGKLMEAK--EVLVQMKEAGLEPDIVVFTNLLSGYAH 283
Query: 432 EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK-ESYPKMALELMPRMLKRNVLPGVV 490
G+ +A L+ D ++G N Y +I +C+ E A+ + M + +V
Sbjct: 284 AGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIV 343
Query: 491 NYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 550
Y+ LISGF K + M+++ ++ + +M + G +P+ TY ++ K +
Sbjct: 344 TYTALISGFCK----WGMIDKGYS--------VLDDMRKKGVMPSQVTYMQIMVAHEKKE 391
Query: 551 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 600
+ +L ++MKR+G PD++ Y V+I K G + E +L+ EM+AN
Sbjct: 392 QFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 134/300 (44%), Gaps = 19/300 (6%)
Query: 305 LHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXX 364
L P + + F ++ C+ G+V EA +V E+M+ + P++ + LL +C++G +
Sbjct: 198 LEP-DEYVFGCLLDALCKNGSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGKLMEA 255
Query: 365 XXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNH 424
++P IV +T+L+ + K YD + N M + PN
Sbjct: 256 KEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYD----LMNDMRKRGFEPNVNCYTV 311
Query: 425 ILRVHCR-EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKR 483
+++ CR E + EA+ + + G + +Y +I CK ++ M K+
Sbjct: 312 LIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKK 371
Query: 484 NVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLI 543
V+P V Y ++ K++ E +E L ++M R GC P+L Y +I
Sbjct: 372 GVMPSQVTYMQIMVAHEKKEQFEECLE------------LIEKMKRRGCHPDLLIYNVVI 419
Query: 544 DGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 603
CK+ + A +L++EM+ G+ P V T+ ++I + G + E F EM + I
Sbjct: 420 RLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIF 479
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/423 (22%), Positives = 166/423 (39%), Gaps = 61/423 (14%)
Query: 176 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 235
+F VL++ FAS +M++ A +V GLE LL L +
Sbjct: 169 LFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM 228
Query: 236 METGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 291
E P PN+ +T ++ G + A E+L ++ +G P +V + + G G +
Sbjct: 229 REKFP-PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKM 287
Query: 292 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQ-RGAVNEALEVLEEMKSSRTFPDVYSYNM 350
A+ L+ + + N +C+ +I C+ ++EA+ V EM+ D+ +Y
Sbjct: 288 ADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTA 347
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
L++ FCK G + DK V + M
Sbjct: 348 LISGFCKWG---------------------------------------MIDKGYSVLDDM 368
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
+ + P+ + I+ H ++ QF E L L+E +G + + YN +I + CK
Sbjct: 369 RKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEV 428
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI 530
K A+ L M + PGV + +I+GF + E AC F+EM
Sbjct: 429 KEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIE------------ACNHFKEMVSR 476
Query: 531 GCL--PNLYTYTCLIDGFCKIDYIDLATQLFD--EMKRKGIFPDVVTYTVLIAWYHKHGR 586
G P T L++ + D +++A ++ K +V +T+ I + G
Sbjct: 477 GIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGH 536
Query: 587 IGE 589
+ E
Sbjct: 537 VKE 539
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 117/248 (47%), Gaps = 26/248 (10%)
Query: 375 QIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQ 434
+ P ++ ++L + + + K++EV + M + + P+ + +L C+ G
Sbjct: 159 KTNPELIEPELFVVLMR-RFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGS 217
Query: 435 FREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYST 494
+EA + ED E+ N + +++ C+E A E++ +M + + P +V ++
Sbjct: 218 VKEASKVFEDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTN 276
Query: 495 LISGFA---KEQSNFEMVERLFTR--EMNVAC-------------------ALFQEMSRI 530
L+SG+A K ++++ + R E NV C +F EM R
Sbjct: 277 LLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERY 336
Query: 531 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 590
GC ++ TYT LI GFCK ID + D+M++KG+ P VTY ++ + K + E
Sbjct: 337 GCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEEC 396
Query: 591 NKLFGEMK 598
+L +MK
Sbjct: 397 LELIEKMK 404
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 167/382 (43%), Gaps = 40/382 (10%)
Query: 235 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGN---PTVVTYGTYIRGLCE 287
+++ G PN+ ++ +M+ GD+R A ++LGK+ GN P VTY + I G C+
Sbjct: 244 MLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCK 303
Query: 288 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 347
G +D+A ++ + N + A++ + + G+ +EAL + +EM S +
Sbjct: 304 AGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVI 363
Query: 348 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL---LCKNKLKGQQLYDKSL 404
YN ++ +GD+ ++ I +T I+ LC+N Y K
Sbjct: 364 YNSIVYWLFMEGDIEGAMSVLRDMNSKNMQ--IDRFTQAIVVRGLCRNG------YVKEA 415
Query: 405 EVYNSMLQNAIRPNTIICNHILRVH-CREGQFREALTLLEDFHEQGINLNQYSYNEIIHM 463
+ + I+C++ L H R+ + A +L QG++L+ S+ +I
Sbjct: 416 VEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDG 475
Query: 464 ICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKE-------------------QS 504
KE + ALE+ M+K N +V Y+++++G +K
Sbjct: 476 YLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIVTY 535
Query: 505 NFEMVERLFTREMNVACALFQEMSRIGCLPN--LYTYTCLIDGFCKIDYIDLATQLFDEM 562
N + E L T + A + +M + + L T+ +I+ CK + A ++ M
Sbjct: 536 NTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFNIMINHLCKFGSYEKAKEVLKFM 595
Query: 563 KRKGIFPDVVTYTVLIAWYHKH 584
+G+ PD +TY LI + KH
Sbjct: 596 VERGVVPDSITYGTLITSFSKH 617
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/404 (20%), Positives = 174/404 (43%), Gaps = 54/404 (13%)
Query: 239 GPLPNIHTYTIMMSC---GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAH 295
G P++ +++ +C GD + A E++ + G +V ++ L +D
Sbjct: 145 GSSPDVFD-SLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFW 203
Query: 296 KLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAF 355
K+ +++ + N + FN VI+ FC+ + EAL V M +P+V S+NM+++
Sbjct: 204 KVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGA 263
Query: 356 CKKGDVXXXXXXXXXXXXCQ---IKPSIVNYTSLI-LLCK-------NKLKGQQL----- 399
CK GD+ + P+ V Y S+I CK +++G +
Sbjct: 264 CKTGDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVD 323
Query: 400 ------------------YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 441
D++L + + M + NT+I N I+ EG A+++
Sbjct: 324 CNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSV 383
Query: 442 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 501
L D + + + +++++ ++ +C+ Y K A+E ++ ++ ++ +V ++TL+
Sbjct: 384 LRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLM----- 438
Query: 502 EQSNFEMVERLFTREMNVACA--LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLF 559
F R+ +ACA + M G + ++ LIDG+ K ++ A +++
Sbjct: 439 ---------HHFVRDKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIY 489
Query: 560 DEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 603
D M + ++V Y ++ K G G + M+ I+
Sbjct: 490 DGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIKDIV 533
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/432 (20%), Positives = 186/432 (43%), Gaps = 31/432 (7%)
Query: 176 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 235
VF+ L++ N + A++V + G + + + N + CL +
Sbjct: 150 VFDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEM 209
Query: 236 METGPLPNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 291
G + N++T+ +++ C + +L A + ++ + G P VV++ I G C+ G +
Sbjct: 210 DSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDM 269
Query: 292 DVAHKLVRK---LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 348
A +L+ K + N+ +N+VI+GFC+ G ++ A + +M S + +Y
Sbjct: 270 RFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTY 329
Query: 349 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLEV 406
L++A+ + G + + V Y S++ L + ++G ++ V
Sbjct: 330 GALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEG------AMSV 383
Query: 407 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 466
M ++ + ++R CR G +EA+ E+ + + +N ++H +
Sbjct: 384 LRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVR 443
Query: 467 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQE 526
+ A +++ ML + + +++ TLI G+ KE +ER A ++
Sbjct: 444 DKKLACADQILGSMLVQGLSLDAISFGTLIDGYLKEGK----LER--------ALEIYDG 491
Query: 527 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 586
M ++ NL Y +++G K A + + M+ K D+VTY L+ K G
Sbjct: 492 MIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKTGN 547
Query: 587 IGEKNKLFGEMK 598
+ E + + +M+
Sbjct: 548 VEEADDILSKMQ 559
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/350 (17%), Positives = 149/350 (42%), Gaps = 23/350 (6%)
Query: 262 ILGKIYRS----GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVI 317
+L + RS G +P V + + +R + G A++++ + + ++ H N +
Sbjct: 133 VLSGLIRSYQACGSSPDV--FDSLVRACTQNGDAQGAYEVIEQTRAEGFCVSVHALNNFM 190
Query: 318 HGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIK 377
++ +V +EM S +V ++N+++ +FCK+ + C +
Sbjct: 191 GCLLNVNEIDRFWKVYKEMDSLGYVENVNTFNLVIYSFCKESKLFEALSVFYRMLKCGVW 250
Query: 378 PSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQ-NAIRPNTIICNHILRVHCREGQF 435
P++V++ +I CK G + L M+ N + PN + N ++ C+ G+
Sbjct: 251 PNVVSFNMMIDGACKT---GDMRFALQLLGKMGMMSGNFVSPNAVTYNSVINGFCKAGRL 307
Query: 436 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 495
A + D + G++ N+ +Y ++ + AL L M + ++ V Y+++
Sbjct: 308 DLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSDEALRLCDEMTSKGLVVNTVIYNSI 367
Query: 496 ISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLA 555
+ E ++ A ++ ++M+ + +T ++ G C+ Y+ A
Sbjct: 368 VYWLFMEG------------DIEGAMSVLRDMNSKNMQIDRFTQAIVVRGLCRNGYVKEA 415
Query: 556 TQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
+ ++ K + D+V + L+ + + ++ +++ G M + LD
Sbjct: 416 VEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLSLD 465
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 150/350 (42%), Gaps = 68/350 (19%)
Query: 274 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL 333
TV +Y ++ ECG +LV ++ P + FN +I C G A + +
Sbjct: 148 TVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLI---CSCGEAGLAKQAV 204
Query: 334 EEMKSSRTF---PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLC 390
+ S+TF P +SYN +LN+
Sbjct: 205 VQFMKSKTFNYRPFKHSYNAILNS------------------------------------ 228
Query: 391 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 450
L G + Y VY ML++ P+ + N +L + R G+ L ++ G
Sbjct: 229 ---LLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGF 285
Query: 451 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK----EQSNF 506
+ + Y+YN ++H++ K + P AL + M + + P V++Y+TLI G ++ E +
Sbjct: 286 SPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKY 345
Query: 507 ---EMVER----------------LFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 547
EMV+ + + E++ A +F+EM+ G LPN++TY +I G C
Sbjct: 346 FLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLC 405
Query: 548 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
A L EM+ +G P+ V Y+ L+++ K G++ E K+ EM
Sbjct: 406 MAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREM 455
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 149/392 (38%), Gaps = 63/392 (16%)
Query: 110 KFGSWV-ETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLD 168
+F W E F H+VN + +++ FA G + ++ L+ ++V D F
Sbjct: 134 RFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMV-----QDGFPT------ 182
Query: 169 LPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXX 228
+ FN+LI + + A F+ +K S N +L L
Sbjct: 183 ----TARTFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLI 238
Query: 229 XXXXXXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRG 284
++E G P++ TY I++ G + + ++ R G +P
Sbjct: 239 EWVYKQMLEDGFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSP----------- 287
Query: 285 LCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 344
+S+ +N ++H + AL L MK P
Sbjct: 288 ------------------------DSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPS 323
Query: 345 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSL 404
V Y L++ + G++ +P +V YT +++ + G+ DK+
Sbjct: 324 VLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYT--VMITGYVVSGE--LDKAK 379
Query: 405 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
E++ M PN N ++R C G+FREA LL++ +G N N Y+ ++ +
Sbjct: 380 EMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYL 439
Query: 465 CKESYPKMALELMPRMLKRN----VLPGVVNY 492
K A +++ M+K+ ++P ++ Y
Sbjct: 440 RKAGKLSEARKVIREMVKKGHYVHLVPKMMKY 471
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 140/348 (40%), Gaps = 34/348 (9%)
Query: 272 NPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQR-GAVNEAL 330
+P+ Y T + L E +++A K + + P N +I C+ G V+ L
Sbjct: 118 DPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGL 177
Query: 331 EVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLC 390
++ EM PD Y+Y L++ C+ G + P++V YTSLI
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLI--- 234
Query: 391 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 450
N L G + D+++ M I PN + ++ C++G+ +A+ L E +G
Sbjct: 235 -NGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGC 293
Query: 451 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA-----KEQSN 505
N +Y +I +CKE + A+EL+ RM + + P Y +ISGF +E +N
Sbjct: 294 RPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAAN 353
Query: 506 F------------------------EMVERLFTREMNVACALFQEMSRIGCLPNLYTYTC 541
F E+V L + A L+ M G + T
Sbjct: 354 FLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLES 413
Query: 542 LIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 589
L+ CK A QL DE+ G P T+ +LI +GE
Sbjct: 414 LVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGE 461
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 130/322 (40%), Gaps = 17/322 (5%)
Query: 277 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 336
++G + L A L+ ++ + ++ ++ G+ + ++L V +M
Sbjct: 53 SFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSLRVFHKM 112
Query: 337 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLK 395
K P +Y +L ++ + + P++ + LI LC+N
Sbjct: 113 KDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRN--- 169
Query: 396 GQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQY 455
D L+++ M + P++ ++ CR G+ EA L + E+
Sbjct: 170 -DGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVV 228
Query: 456 SYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTR 515
+Y +I+ +C A+ + M + + P V YS+L+ G K+ + + +E
Sbjct: 229 TYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME----- 283
Query: 516 EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYT 575
LF+ M GC PN+ TYT LI G CK I A +L D M +G+ PD Y
Sbjct: 284 -------LFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYG 336
Query: 576 VLIAWYHKHGRIGEKNKLFGEM 597
+I+ + + E EM
Sbjct: 337 KVISGFCAISKFREAANFLDEM 358
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 13/207 (6%)
Query: 403 SLEVYNSMLQNAIRPNTIICNHILRVHCR-EGQFREALTLLEDFHEQGINLNQYSYNEII 461
+ + Y +M + + P N +++ CR +G L + + ++G + + Y+Y +I
Sbjct: 140 AFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLI 199
Query: 462 HMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVAC 521
+C+ A +L M++++ P VV Y++LI+G ++ ++ A
Sbjct: 200 SGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCG------------SKNVDEAM 247
Query: 522 ALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWY 581
+EM G PN++TY+ L+DG CK A +LF+ M +G P++VTYT LI
Sbjct: 248 RYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGL 307
Query: 582 HKHGRIGEKNKLFGEMKANCILLDDGI 608
K +I E +L M + D G+
Sbjct: 308 CKEQKIQEAVELLDRMNLQGLKPDAGL 334
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/399 (21%), Positives = 156/399 (39%), Gaps = 65/399 (16%)
Query: 158 DSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLL 216
DS F + D S + ++ + + L A + + + + +GL + S N L+
Sbjct: 104 DSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163
Query: 217 KCLXXXXXXXXXXXXXXXLM-ETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGG 271
K L M + G P+ +TY ++S G I A ++ ++
Sbjct: 164 KALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223
Query: 272 NPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE 331
PTVVTY + I GLC VD A + + ++ K N +++++ G C+ G +A+E
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 332 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 391
+ E M + P++ +Y L+ CK
Sbjct: 284 LFEMMMARGCRPNMVTYTTLITGLCK---------------------------------- 309
Query: 392 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 451
+Q +++E+ + M ++P+ + ++ C +FREA L++ GI
Sbjct: 310 -----EQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGIT 364
Query: 452 LNQYSY-------NEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS 504
N+ ++ NE++ +C +YP A L M R + V +L+ K+
Sbjct: 365 PNRLTWNIHVKTSNEVVRGLCA-NYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKG- 422
Query: 505 NFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLI 543
E A L E+ GC+P+ T+ LI
Sbjct: 423 -----------EFQKAVQLVDEIVTDGCIPSKGTWKLLI 450
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 104/226 (46%), Gaps = 14/226 (6%)
Query: 375 QIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQ 434
+I+ +V+ L+ +C+ + + +D SL V++ M P+ +L + E Q
Sbjct: 78 KIENCVVSEDILLSICRGYGRVHRPFD-SLRVFHKMKDFDCDPSQKAYVTVLAILVEENQ 136
Query: 435 FREALTLLEDFHEQGINLNQYSYNEIIHMICK-ESYPKMALELMPRMLKRNVLPGVVNYS 493
A ++ E G+ S N +I +C+ + L++ M KR P Y
Sbjct: 137 LNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYG 196
Query: 494 TLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 553
TLISG + F R ++ A LF EM C P + TYT LI+G C +D
Sbjct: 197 TLISGLCR-----------FGR-IDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVD 244
Query: 554 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 599
A + +EMK KGI P+V TY+ L+ K GR + +LF M A
Sbjct: 245 EAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMA 290
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 97/224 (43%), Gaps = 17/224 (7%)
Query: 379 SIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREA 438
S Y L L+ NK K + +++ N ++ I + IC RVH + ++
Sbjct: 52 SSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLS--ICRGYGRVH----RPFDS 105
Query: 439 LTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISG 498
L + + + +Q +Y ++ ++ +E+ +A + M + + P V + + LI
Sbjct: 106 LRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKA 165
Query: 499 FAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQL 558
+ ++ +F EM + GC P+ YTY LI G C+ ID A +L
Sbjct: 166 LCRNDGT-----------VDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKL 214
Query: 559 FDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
F EM K P VVTYT LI + E + EMK+ I
Sbjct: 215 FTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGI 258
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/491 (21%), Positives = 187/491 (38%), Gaps = 49/491 (9%)
Query: 156 CDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFL 215
C+D F Q S L P S ++N +I ++ L+ A+ F ++ G + + N L
Sbjct: 164 CNDVFAQISFLGMKP--STRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNIL 221
Query: 216 LKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGG 271
+ + + + G PN+ TYTI++ G + A + L +
Sbjct: 222 IHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKL 281
Query: 272 NPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE 331
NP T T++ G+ C A +++ K L ++AV++ E +
Sbjct: 282 NPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQ 341
Query: 332 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LL 389
L ++ PD ++N ++ K D+ +KP Y L+ LL
Sbjct: 342 FLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALL 401
Query: 390 CKNKLKGQQLYDKSLEV---------YNS--------------------MLQNAIRPNTI 420
+ Y K + V YN+ M I PN +
Sbjct: 402 NAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLV 461
Query: 421 ICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRM 480
N L + G ++ +LE G + +++ II+ +C+ K A + M
Sbjct: 462 TFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEM 521
Query: 481 LKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYT 540
L+ + P + Y+ LI T + + + LF +M G P+LY Y
Sbjct: 522 LEWGIEPNEITYNILIRSCCS------------TGDTDRSVKLFAKMKENGLSPDLYAYN 569
Query: 541 CLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 600
I FCK+ + A +L M R G+ PD TY+ LI + GR E ++F ++ +
Sbjct: 570 ATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERH 629
Query: 601 CILLDDGIKKL 611
+ D K+L
Sbjct: 630 GCVPDSYTKRL 640
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 12/168 (7%)
Query: 431 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 490
R+G ++ LL++ + G ++ +I + K ++ ++ + P
Sbjct: 122 RKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTR 181
Query: 491 NYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 550
Y+ +I K S +++A FQ+M GC P+ +TY LI G CK
Sbjct: 182 LYNAVIDALVKSNS------------LDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKG 229
Query: 551 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
+D A +L +M+++G P+V TYT+LI + GR+ E K M+
Sbjct: 230 VVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMR 277
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 160/363 (44%), Gaps = 23/363 (6%)
Query: 239 GPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
G P+I +T+ + G ++ A +L K+ G + V+ + I G C+ G + A
Sbjct: 301 GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEA 360
Query: 295 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 354
KL+ +L P N +++ + C G + A + +E+ PD Y +++
Sbjct: 361 IKLIHSF--RLRP-NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDG 417
Query: 355 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 414
+C G PS+ T LI C + + D V+ +M
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACS---RFGSISDAE-SVFRNMKTEG 473
Query: 415 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 474
++ + + N+++ + + Q + L+++ GI+ + +YN +IH + Y A
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEAN 533
Query: 475 ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLP 534
E++ +++R +P + ++ +I GF+K + A L+ M+ + P
Sbjct: 534 EIISELIRRGFVPSTLAFTDVIGGFSKRG------------DFQEAFILWFYMADLRMKP 581
Query: 535 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
++ T + L+ G+CK ++ A LF+++ G+ PDVV Y LI Y G I + +L
Sbjct: 582 DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
Query: 595 GEM 597
G M
Sbjct: 642 GLM 644
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 132/291 (45%), Gaps = 9/291 (3%)
Query: 235 LMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
+ E G LP+ YT M+ + G A + G + +SG P++ T I G
Sbjct: 399 IFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGS 458
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
+ A + R + + L+ +N ++HG+ + +N+ E+++EM+S+ PDV +YN+
Sbjct: 459 ISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNI 518
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
L+++ +G + PS + +T +I + + ++ ++ M
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVI----GGFSKRGDFQEAFILWFYM 574
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
++P+ + C+ +L +C+ + +A+ L + G+ + YN +IH C
Sbjct: 575 ADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDI 634
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGF-AKEQSNFEMVERLFTREMNVA 520
+ A EL+ M++R +LP + L+ G K N E + E+ VA
Sbjct: 635 EKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEIIVA 685
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 134/309 (43%), Gaps = 22/309 (7%)
Query: 242 PNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 297
PNI Y+ +S GD+ A+ I +I+ G P V Y T I G C G D A +
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 298 VRKLHCKLHPLNSHCFNAVIHGFCQR-GAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 356
L +P S + ++ G C R G++++A V MK+ DV +YN L++ +
Sbjct: 431 FGALLKSGNP-PSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYG 489
Query: 357 KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIR 416
K + I P + Y LI + + + D++ E+ + +++
Sbjct: 490 KTHQLNKVFELIDEMRSAGISPDVATYNILI----HSMVVRGYIDEANEIISELIRRGFV 545
Query: 417 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 476
P+T+ ++ + G F+EA L + + + + + ++H CK + A+ L
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVL 605
Query: 477 MPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNL 536
++L + P VV Y+TLI G+ ++ AC L M + G LPN
Sbjct: 606 FNKLLDAGLKPDVVLYNTLIHGYCS------------VGDIEKACELIGLMVQRGMLPNE 653
Query: 537 YTYTCLIDG 545
T+ L+ G
Sbjct: 654 STHHALVLG 662
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 400 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 459
+DK E+ M IRP+ + + C+ G +EA ++L GI+ + S +
Sbjct: 287 FDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSS 346
Query: 460 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNV 519
+I CK P+ A++L+ R P + YS+ +S T +M
Sbjct: 347 VIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICS------------TGDMLR 391
Query: 520 ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 579
A +FQE+ +G LP+ YT +IDG+C + D A Q F + + G P + T T+LI
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 580 WYHKHGRIGEKNKLFGEMKANCILLD 605
+ G I + +F MK + LD
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLD 477
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 147/356 (41%), Gaps = 25/356 (7%)
Query: 247 YTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH 302
++I++ C + +A ++ K+ + G P+ + ++ + +++A + V +
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHML 263
Query: 303 CKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVX 362
+ LN+ + I +C G ++ E+L MK PD+ ++ + ++ CK G +
Sbjct: 264 SRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLK 323
Query: 363 XXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTII 421
I V+ +S+I CK K E + +RPN +
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCK--------VGKPEEAIKLIHSFRLRPNIFV 375
Query: 422 CNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRML 481
+ L C G A T+ ++ E G+ + Y +I C A + +L
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL 435
Query: 482 KRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTC 541
K P + + LI ++ S ++ A ++F+ M G ++ TY
Sbjct: 436 KSGNPPSLTTSTILIGACSRFGS------------ISDAESVFRNMKTEGLKLDVVTYNN 483
Query: 542 LIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
L+ G+ K ++ +L DEM+ GI PDV TY +LI G I E N++ E+
Sbjct: 484 LMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 160/363 (44%), Gaps = 23/363 (6%)
Query: 239 GPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
G P+I +T+ + G ++ A +L K+ G + V+ + I G C+ G + A
Sbjct: 301 GIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEA 360
Query: 295 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 354
KL+ +L P N +++ + C G + A + +E+ PD Y +++
Sbjct: 361 IKLIHSF--RLRP-NIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDG 417
Query: 355 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 414
+C G PS+ T LI C + + D V+ +M
Sbjct: 418 YCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACS---RFGSISDAE-SVFRNMKTEG 473
Query: 415 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 474
++ + + N+++ + + Q + L+++ GI+ + +YN +IH + Y A
Sbjct: 474 LKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEAN 533
Query: 475 ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLP 534
E++ +++R +P + ++ +I GF+K + A L+ M+ + P
Sbjct: 534 EIISELIRRGFVPSTLAFTDVIGGFSKRG------------DFQEAFILWFYMADLRMKP 581
Query: 535 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
++ T + L+ G+CK ++ A LF+++ G+ PDVV Y LI Y G I + +L
Sbjct: 582 DVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELI 641
Query: 595 GEM 597
G M
Sbjct: 642 GLM 644
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 132/291 (45%), Gaps = 9/291 (3%)
Query: 235 LMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
+ E G LP+ YT M+ + G A + G + +SG P++ T I G
Sbjct: 399 IFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGS 458
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
+ A + R + + L+ +N ++HG+ + +N+ E+++EM+S+ PDV +YN+
Sbjct: 459 ISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNI 518
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
L+++ +G + PS + +T +I + + ++ ++ M
Sbjct: 519 LIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVI----GGFSKRGDFQEAFILWFYM 574
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
++P+ + C+ +L +C+ + +A+ L + G+ + YN +IH C
Sbjct: 575 ADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDI 634
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGF-AKEQSNFEMVERLFTREMNVA 520
+ A EL+ M++R +LP + L+ G K N E + E+ VA
Sbjct: 635 EKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSETHASMLLEEIIVA 685
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 134/309 (43%), Gaps = 22/309 (7%)
Query: 242 PNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 297
PNI Y+ +S GD+ A+ I +I+ G P V Y T I G C G D A +
Sbjct: 371 PNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQY 430
Query: 298 VRKLHCKLHPLNSHCFNAVIHGFCQR-GAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 356
L +P S + ++ G C R G++++A V MK+ DV +YN L++ +
Sbjct: 431 FGALLKSGNP-PSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYG 489
Query: 357 KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIR 416
K + I P + Y LI + + + D++ E+ + +++
Sbjct: 490 KTHQLNKVFELIDEMRSAGISPDVATYNILI----HSMVVRGYIDEANEIISELIRRGFV 545
Query: 417 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 476
P+T+ ++ + G F+EA L + + + + + ++H CK + A+ L
Sbjct: 546 PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVL 605
Query: 477 MPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNL 536
++L + P VV Y+TLI G+ ++ AC L M + G LPN
Sbjct: 606 FNKLLDAGLKPDVVLYNTLIHGYCS------------VGDIEKACELIGLMVQRGMLPNE 653
Query: 537 YTYTCLIDG 545
T+ L+ G
Sbjct: 654 STHHALVLG 662
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 15/206 (7%)
Query: 400 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 459
+DK E+ M IRP+ + + C+ G +EA ++L GI+ + S +
Sbjct: 287 FDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSS 346
Query: 460 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNV 519
+I CK P+ A++L+ R P + YS+ +S T +M
Sbjct: 347 VIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICS------------TGDMLR 391
Query: 520 ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 579
A +FQE+ +G LP+ YT +IDG+C + D A Q F + + G P + T T+LI
Sbjct: 392 ASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIG 451
Query: 580 WYHKHGRIGEKNKLFGEMKANCILLD 605
+ G I + +F MK + LD
Sbjct: 452 ACSRFGSISDAESVFRNMKTEGLKLD 477
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 147/356 (41%), Gaps = 25/356 (7%)
Query: 247 YTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH 302
++I++ C + +A ++ K+ + G P+ + ++ + +++A + V +
Sbjct: 204 FSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHML 263
Query: 303 CKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVX 362
+ LN+ + I +C G ++ E+L MK PD+ ++ + ++ CK G +
Sbjct: 264 SRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLK 323
Query: 363 XXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTII 421
I V+ +S+I CK K E + +RPN +
Sbjct: 324 EATSVLFKLKLFGISQDSVSVSSVIDGFCK--------VGKPEEAIKLIHSFRLRPNIFV 375
Query: 422 CNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRML 481
+ L C G A T+ ++ E G+ + Y +I C A + +L
Sbjct: 376 YSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALL 435
Query: 482 KRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTC 541
K P + + LI ++ S ++ A ++F+ M G ++ TY
Sbjct: 436 KSGNPPSLTTSTILIGACSRFGS------------ISDAESVFRNMKTEGLKLDVVTYNN 483
Query: 542 LIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
L+ G+ K ++ +L DEM+ GI PDV TY +LI G I E N++ E+
Sbjct: 484 LMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 120/294 (40%), Gaps = 19/294 (6%)
Query: 306 HPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXX 365
+ L C+N ++ + G V E + EM PD+Y++N L+N +CK G V
Sbjct: 116 YKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAK 175
Query: 366 XXXXXXXXCQIKPSIVNYTSLILL-CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNH 424
P YTS I C+ K D + +V+ M QN N +
Sbjct: 176 QYVTWLIQAGCDPDYFTYTSFITGHCRRKE-----VDAAFKVFKEMTQNGCHRNEVSYTQ 230
Query: 425 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 484
++ + EAL+LL + N +Y +I +C A+ L +M +
Sbjct: 231 LIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESG 290
Query: 485 VLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLID 544
+ P Y+ LI F + ++ A L + M G +PN+ TY LI
Sbjct: 291 IKPDDCMYTVLIQSFCSGDT------------LDEASGLLEHMLENGLMPNVITYNALIK 338
Query: 545 GFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
GFCK + + A L +M + + PD++TY LIA G + +L M+
Sbjct: 339 GFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLME 391
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 140/336 (41%), Gaps = 27/336 (8%)
Query: 248 TIMM--SCGDIRLAAEILG--KIYRSGGN------PTVVTYGTYIRGLCECGYVDVAHKL 297
TI+M SC +R A ++ + R G + T Y + L G V+ +L
Sbjct: 83 TILMIKSCNSVRDALFVVDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRL 142
Query: 298 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 357
++ L + + FN +++G+C+ G V EA + + + + PD ++Y + C+
Sbjct: 143 YTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCR 202
Query: 358 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 417
+ +V + V+YT LI L + D++L + M + P
Sbjct: 203 RKEVDAAFKVFKEMTQNGCHRNEVSYTQLIY----GLFEAKKIDEALSLLVKMKDDNCCP 258
Query: 418 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
N ++ C GQ EA+ L + E GI + Y +I C A L+
Sbjct: 259 NVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLL 318
Query: 478 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLY 537
ML+ ++P V+ Y+ LI GF K + ++ A L +M +P+L
Sbjct: 319 EHMLENGLMPNVITYNALIKGFCK-------------KNVHKAMGLLSKMLEQNLVPDLI 365
Query: 538 TYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVT 573
TY LI G C +D A +L M+ G+ P+ T
Sbjct: 366 TYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 86/198 (43%), Gaps = 12/198 (6%)
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
+Y ML++ + P+ N ++ +C+ G EA + + G + + ++Y I C
Sbjct: 142 LYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHC 201
Query: 466 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQ 525
+ A ++ M + V+Y+ LI G FE ++++ A +L
Sbjct: 202 RRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGL------FE------AKKIDEALSLLV 249
Query: 526 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
+M C PN+ TYT LID C A LF +M GI PD YTVLI +
Sbjct: 250 KMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGD 309
Query: 586 RIGEKNKLFGEMKANCIL 603
+ E + L M N ++
Sbjct: 310 TLDEASGLLEHMLENGLM 327
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 86/184 (46%), Gaps = 12/184 (6%)
Query: 423 NHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLK 482
N++L R G E L + E ++ + Y++N +++ CK Y A + + +++
Sbjct: 124 NNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQ 183
Query: 483 RNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCL 542
P Y++ I+G + +E++ A +F+EM++ GC N +YT L
Sbjct: 184 AGCDPDYFTYTSFITGHCRR------------KEVDAAFKVFKEMTQNGCHRNEVSYTQL 231
Query: 543 IDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
I G + ID A L +MK P+V TYTVLI G+ E LF +M + I
Sbjct: 232 IYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGI 291
Query: 603 LLDD 606
DD
Sbjct: 292 KPDD 295
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/382 (20%), Positives = 148/382 (38%), Gaps = 34/382 (8%)
Query: 95 VRVIKSLNWKIAREKKFGSWVE-THGFSHSVNYFRIIIHTFAMAGMHLEVFAL------- 146
V + SLN F W+ F H+V + ++ + EV +
Sbjct: 30 VSSLFSLNLDPQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKITILMIKS 89
Query: 147 ---LRD---IVGYCKC---DDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVF 197
+RD +V +C+ DSFE L + +N L+ A ++E +++
Sbjct: 90 CNSVRDALFVVDFCRTMRKGDSFEIKYKL------TPKCYNNLLSSLARFGLVEEMKRLY 143
Query: 198 VSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC---- 253
+ I + N L+ L++ G P+ TYT ++
Sbjct: 144 TEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRR 203
Query: 254 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 313
++ A ++ ++ ++G + V+Y I GL E +D A L+ K+ N +
Sbjct: 204 KEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTY 263
Query: 314 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 373
+I C G +EA+ + ++M S PD Y +L+ +FC +
Sbjct: 264 TVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLE 323
Query: 374 CQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 432
+ P+++ Y +LI CK + K++ + + ML+ + P+ I N ++ C
Sbjct: 324 NGLMPNVITYNALIKGFCKKNVH------KAMGLLSKMLEQNLVPDLITYNTLIAGQCSS 377
Query: 433 GQFREALTLLEDFHEQGINLNQ 454
G A LL E G+ NQ
Sbjct: 378 GNLDSAYRLLSLMEESGLVPNQ 399
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 172/434 (39%), Gaps = 60/434 (13%)
Query: 174 VLVFNVLIKVFASNSMLEHAHQVFVSAK-NVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
+ V L+K +A+ M + A +F A ++G I++ NFL+ +
Sbjct: 146 IRVSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFF 205
Query: 233 XXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
+ G + HTY +++ D ++L ++ S V Y +I GLC
Sbjct: 206 WEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLN 265
Query: 289 GYVDVAHKLVRKLHCKLHPLNSH----CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 344
D+A+ L++ L ++ + V+ G C + +A V+ +M+ PD
Sbjct: 266 QMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPD 325
Query: 345 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSL 404
VY Y+ ++ K ++ K++
Sbjct: 326 VYVYSAIIEGHRKNMNIP---------------------------------------KAV 346
Query: 405 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
+V+N ML+ R N +I + IL+ +C+ G F EA L ++F E I+L++ YN +
Sbjct: 347 DVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDAL 406
Query: 465 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALF 524
K + A+EL M + + P V+NY+TLI G + + A L
Sbjct: 407 GKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCC------------LQGKCSDAFDLM 454
Query: 525 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 584
EM G P++ Y L G A + M+ +G+ P VT+ ++I
Sbjct: 455 IEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDA 514
Query: 585 GRIGEKNKLFGEMK 598
G + + + ++
Sbjct: 515 GELDKAEAFYESLE 528
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 155/380 (40%), Gaps = 72/380 (18%)
Query: 238 TGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDV 293
TG P+I Y ++ + G + A E L + G PT VT+ I GL + G +D
Sbjct: 460 TGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDK 519
Query: 294 AHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLN 353
A L K ++ +++ GFC G ++ A E ++ FP
Sbjct: 520 AEAFYESLEHKSRENDA----SMVKGFCAAGCLDHAFERFIRLE----FP---------- 561
Query: 354 AFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQN 413
P V +T LC K K+ ++ + M +
Sbjct: 562 -----------------------LPKSVYFTLFTSLCAEK----DYISKAQDLLDRMWKL 594
Query: 414 AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMA 473
+ P + ++ CR R+A E + I + ++Y +I+ C+ + PK A
Sbjct: 595 GVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQA 654
Query: 474 LELMPRMLKRNVLPGVVNYSTLISG-----FAKEQSNFEMVERL--FTREMNVAC----- 521
L M +R+V P VV YS L++ +E F+++ + +T +N C
Sbjct: 655 YALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDL 714
Query: 522 ----ALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 577
ALF++M R +P++ TYT L+ + L EMK + PDV YTVL
Sbjct: 715 KKVYALFKDMKRREIVPDVVTYTVLLKNKPE-------RNLSREMKAFDVKPDVFYYTVL 767
Query: 578 IAWYHKHGRIGEKNKLFGEM 597
I W K G +GE ++F +M
Sbjct: 768 IDWQCKIGDLGEAKRIFDQM 787
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 118/291 (40%), Gaps = 43/291 (14%)
Query: 240 PLPNIHTYTIMMS-CGD---IRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAH 295
PLP +T+ S C + I A ++L ++++ G P YG I C V A
Sbjct: 561 PLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAR 620
Query: 296 KLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA- 354
+ L K + + +I+ +C+ +A + E+MK PDV +Y++LLN+
Sbjct: 621 EFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSD 680
Query: 355 ---------------------------FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI 387
+C D+ +I P +V YT L+
Sbjct: 681 PELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLL 740
Query: 388 LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHE 447
K K ++ + ++ ++ ++P+ ++ C+ G EA + + E
Sbjct: 741 -----KNKPERNLSREMKAFD------VKPDVFYYTVLIDWQCKIGDLGEAKRIFDQMIE 789
Query: 448 QGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISG 498
G++ + Y +I CK Y K A + RM++ V P VV Y+ LI+G
Sbjct: 790 SGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAG 840
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/354 (18%), Positives = 138/354 (38%), Gaps = 28/354 (7%)
Query: 150 IVGYCKC---DDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLE 206
+ G+C D +FE+F L+ P + F + + A + A + +G+E
Sbjct: 539 VKGFCAAGCLDHAFERF-IRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVE 597
Query: 207 LHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEI 262
L+ L+ +P++ TYTIM++ + + A +
Sbjct: 598 PEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYAL 657
Query: 263 LGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQ 322
+ R P VVTY + D + R++ + + +I+ +C
Sbjct: 658 FEDMKRRDVKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCH 710
Query: 323 RGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVN 382
+ + + ++MK PDV +Y +LL ++ +KP +
Sbjct: 711 LNDLKKVYALFKDMKRREIVPDVVTYTVLLKNKPERN-------LSREMKAFDVKPDVFY 763
Query: 383 YTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 441
YT LI CK G+ + +++ M+++ + P+ ++ C+ G +EA +
Sbjct: 764 YTVLIDWQCKIGDLGE-----AKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMI 818
Query: 442 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 495
+ E G+ + Y +I C+ + A++L+ ML++ + P + S +
Sbjct: 819 FDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 127/572 (22%), Positives = 225/572 (39%), Gaps = 114/572 (19%)
Query: 110 KFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEV-----FALLRDIVGYCKCDDSFEQFS 164
+F WV GFSH F +++ F +L V F++ R G K D +
Sbjct: 86 RFFDWVSNKGFSHKEQSFFLMLE-FLGRARNLNVARNFLFSIERRSNGCVKLQDRY---- 140
Query: 165 TLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXX 224
FN LI+ + + + + + ++F + K +G+ + + N LL L
Sbjct: 141 ------------FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGR 188
Query: 225 XXXXXXXXXXLMET-GPLPNIHTYTIMMS--CGD--IRLAAEILGKIYRSGGNPTVVTYG 279
+ T G P+ +T+ +++ C + + A I + NP VVTY
Sbjct: 189 TGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYN 248
Query: 280 TYIRGLCECGYVDVAHKLVR---KLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 336
T I GLC G V +AH ++ K +HP N + ++ G+C + ++EA+ V +M
Sbjct: 249 TIIDGLCRAGKVKIAHNVLSGMLKKATDVHP-NVVSYTTLVRGYCMKQEIDEAVLVFHDM 307
Query: 337 KSS------------------------------------RTF-PDVYSYNMLLNAFCKKG 359
S TF PD ++N+L+ A C G
Sbjct: 308 LSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAG 367
Query: 360 DVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLC-KNKL-KGQQLYDKSLEVYNSMLQNAIR 416
+ ++ P +Y+ LI LC +N+ + + L+++ E + ++ +
Sbjct: 368 HLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECK 427
Query: 417 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 476
P N + C G+ ++A + ++G+ + SY +I C+E K A EL
Sbjct: 428 PLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYEL 486
Query: 477 MPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNL 536
+ ML+R +P + Y LI G K E +A Q M R LP
Sbjct: 487 LVLMLRREFVPDLETYELLIDGLLK------------IGEALLAHDTLQRMLRSSYLPVA 534
Query: 537 YTYTCLI----------DGFCKIDY---------IDLATQ----LFDEMKRKGIFPDVVT 573
T+ ++ + FC + IDL+TQ LF +++ F
Sbjct: 535 TTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAF----- 589
Query: 574 YTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
+++ + +G + + +L G + N LLD
Sbjct: 590 --LIVRLLYDNGYLVKMEELLGYLCENRKLLD 619
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 154/366 (42%), Gaps = 31/366 (8%)
Query: 273 PTVVTYGTYIRGLCECGYVDVAHKLVRKL---HCKLHPLNSHCFNAVIHGFCQR-GAVNE 328
PT TY I+ C G ++ A ++ ++ H + +NA I G +R G E
Sbjct: 210 PTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEE 269
Query: 329 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL 388
A++V + MK R P +YN+++N + K Q KP+I YT+L+
Sbjct: 270 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALV- 328
Query: 389 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 448
N + L +K+ E++ + ++ + P+ + N ++ + R G A +
Sbjct: 329 ---NAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM 385
Query: 449 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK------- 501
G ++ SYN ++ + A + M + + P + ++ L+S ++K
Sbjct: 386 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKC 445
Query: 502 EQSNFEMVERLFTREMNVACALFQEMSRIG----------------CLPNLYTYTCLIDG 545
E EM E + V ++ R+G C ++ TY LI+
Sbjct: 446 EAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINI 505
Query: 546 FCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
+ K +++ +LF E+K K PDVVT+T I Y + + ++F EM + D
Sbjct: 506 YGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPD 565
Query: 606 DGIKKL 611
G K+
Sbjct: 566 GGTAKV 571
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/294 (19%), Positives = 127/294 (43%), Gaps = 12/294 (4%)
Query: 312 CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 371
CFN +I + Q+ EA + ++ SR P +Y +L+ A+C G +
Sbjct: 179 CFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEM 238
Query: 372 XXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 431
+ P + T + +K + +++++V+ M ++ +P T N ++ ++ +
Sbjct: 239 QNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGK 298
Query: 432 EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 491
+ + L + N +Y +++ +E + A E+ ++ + + P V
Sbjct: 299 ASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYV 358
Query: 492 YSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 551
Y+ L+ +++ + E +F M +GC P+ +Y ++D + +
Sbjct: 359 YNALMESYSRAGYPYGAAE------------IFSLMQHMGCEPDRASYNIMVDAYGRAGL 406
Query: 552 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
A +F+EMKR GI P + ++ +L++ Y K + + + EM N + D
Sbjct: 407 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 460
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/404 (20%), Positives = 167/404 (41%), Gaps = 33/404 (8%)
Query: 176 VFNVLIKVFASNSMLEHAHQVFV-------SAKNVGLELHIRSCNFLLKCLXXXXXXXXX 228
+ +LIK + ++E A V V S K +G+ ++ N ++ L
Sbjct: 214 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVY----NAYIEGLMKRKGNTEE 269
Query: 229 XXXXXXLMETGPL-PNIHTYTIMMSCGDIRLAAEILGKIY---RSGG-NPTVVTYGTYIR 283
M+ P TY +M++ + + K+Y RS P + TY +
Sbjct: 270 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 329
Query: 284 GLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFP 343
G + A ++ +L + + +NA++ + + G A E+ M+ P
Sbjct: 330 AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP 389
Query: 344 DVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKS 403
D SYN++++A+ + G I P++ S +LL K + + K
Sbjct: 390 DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTM---KSHMLLLSAYSKARDV-TKC 445
Query: 404 LEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHM 463
+ M +N + P+T + N +L ++ R GQF + +L + + +YN +I++
Sbjct: 446 EAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINI 505
Query: 464 ICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACAL 523
K + + EL + ++N P VV +++ I +++ ++L+ + + V
Sbjct: 506 YGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSR--------KKLYVKCLEV---- 553
Query: 524 FQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 567
F+EM GC P+ T L+ + ++ T + M KG+
Sbjct: 554 FEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM-HKGV 596
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 116/268 (43%), Gaps = 22/268 (8%)
Query: 336 MKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKL 394
++ S PDV +N+L++A+ +K + P+ Y LI C +
Sbjct: 168 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYC---M 224
Query: 395 KGQQLYDKSLEVYNSMLQNAIRPNTIICN----HILRVHCREGQFREALTLLEDFHEQGI 450
G L +++ V M + + P TI +I + R+G EA+ + +
Sbjct: 225 AG--LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC 282
Query: 451 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 510
+YN +I++ K S M+ +L M P + Y+ L++ FA+E + E
Sbjct: 283 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREG----LCE 338
Query: 511 RLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPD 570
+ A +F+++ G P++Y Y L++ + + Y A ++F M+ G PD
Sbjct: 339 K--------AEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPD 390
Query: 571 VVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
+Y +++ Y + G + +F EMK
Sbjct: 391 RASYNIMVDAYGRAGLHSDAEAVFEEMK 418
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 123/303 (40%), Gaps = 12/303 (3%)
Query: 153 YCKCDDSFEQFSTLLDLPHH----SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELH 208
Y K S+ + ++ H ++ + L+ FA + E A ++F + GLE
Sbjct: 296 YGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPD 355
Query: 209 IRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC-GDIRL---AAEILG 264
+ N L++ + G P+ +Y IM+ G L A +
Sbjct: 356 VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE 415
Query: 265 KIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRG 324
++ R G PT+ ++ + + V +V+++ ++ N++++ + + G
Sbjct: 416 EMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLG 475
Query: 325 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYT 384
+ ++L EM++ D+ +YN+L+N + K G + +P +V +T
Sbjct: 476 QFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 535
Query: 385 SLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 444
S I K +LY K LEV+ M+ + P+ +L E Q + ++L
Sbjct: 536 SRIGAYSRK----KLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRT 591
Query: 445 FHE 447
H+
Sbjct: 592 MHK 594
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 91/436 (20%), Positives = 188/436 (43%), Gaps = 37/436 (8%)
Query: 114 WVETH-GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHH 172
W E GF+ S + F ++++ A ++L+ D V + D+ S L+
Sbjct: 124 WAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRV---RSDEG----SNLV----- 171
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNV----GLELHIRSCNFLLKCLXXXXXXXXX 228
S F VLI+ +A M++ A + F A++ +R LL L
Sbjct: 172 SADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREA 231
Query: 229 XXXXXXL---METGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTY 281
+ M++ +P++ + I+++ ++ A ++ ++ PTVVTYGT
Sbjct: 232 SMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTL 291
Query: 282 IRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRT 341
I G C V +A +++ ++ +N FN +I G + G ++EAL ++E +
Sbjct: 292 IEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCES 351
Query: 342 FPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYD 401
P + +YN L+ FCK GD+ + P+ Y K ++
Sbjct: 352 GPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEE--- 408
Query: 402 KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEII 461
+ +Y +++ P+ + + IL++ C +G+ A+ + ++ +GI+ + + +I
Sbjct: 409 -GMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLI 467
Query: 462 HMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVAC 521
H++C+ + A E ++R ++P + + + +G + + +M +RL
Sbjct: 468 HLLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGL-RSKGMSDMAKRL--------S 518
Query: 522 ALFQEMSRIGCLPNLY 537
+L + LPN Y
Sbjct: 519 SLMSSLPHSKKLPNTY 534
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 118/269 (43%), Gaps = 25/269 (9%)
Query: 316 VIHGFCQRGAVNEALEVLEEMK---SSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
++ C+ G V EA LE + S P V +N+LLN + + +
Sbjct: 218 LLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMK 277
Query: 373 XCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 431
+KP++V Y +LI C+ ++ Q+ ++EV M + N ++ N I+
Sbjct: 278 AMNVKPTVVTYGTLIEGYCR--MRRVQI---AMEVLEEMKMAEMEINFMVFNPIIDGLGE 332
Query: 432 EGQFREALTLLEDFH--EQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGV 489
G+ EAL ++E F E G + +YN ++ CK A +++ M+ R V P
Sbjct: 333 AGRLSEALGMMERFFVCESGPTI--VTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTT 390
Query: 490 VNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKI 549
Y+ F+K E L+ ++ G P+ TY ++ C+
Sbjct: 391 TTYNHFFKYFSKHNKTEE------------GMNLYFKLIEAGHSPDRLTYHLILKMLCED 438
Query: 550 DYIDLATQLFDEMKRKGIFPDVVTYTVLI 578
+ LA Q+ EMK +GI PD++T T+LI
Sbjct: 439 GKLSLAMQVNKEMKNRGIDPDLLTTTMLI 467
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/335 (18%), Positives = 136/335 (40%), Gaps = 20/335 (5%)
Query: 278 YGTYIRGLCECGYVDVAHKLV---RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 334
+ + + LC+ ++A LV + + +++ F +I + + G V +A+ E
Sbjct: 138 FDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFE 197
Query: 335 EMKS----SRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLC 390
+S ++ ++ +LL+A CK+G V + + +L
Sbjct: 198 FARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILL 257
Query: 391 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 450
+ ++L ++ +++ M ++P + ++ +CR + + A+ +LE+ +
Sbjct: 258 NGWFRSRKL-KQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEM 316
Query: 451 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 510
+N +N II + + AL +M R P +V Y++L+ F K
Sbjct: 317 EINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCK--------- 367
Query: 511 RLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPD 570
++ A + + M G P TY F K + + L+ ++ G PD
Sbjct: 368 ---AGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPD 424
Query: 571 VVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
+TY +++ + G++ ++ EMK I D
Sbjct: 425 RLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPD 459
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 154/366 (42%), Gaps = 31/366 (8%)
Query: 273 PTVVTYGTYIRGLCECGYVDVAHKLVRKL---HCKLHPLNSHCFNAVIHGFCQR-GAVNE 328
PT TY I+ C G ++ A ++ ++ H + +NA I G +R G E
Sbjct: 188 PTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEE 247
Query: 329 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL 388
A++V + MK R P +YN+++N + K Q KP+I YT+L+
Sbjct: 248 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALV- 306
Query: 389 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 448
N + L +K+ E++ + ++ + P+ + N ++ + R G A +
Sbjct: 307 ---NAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHM 363
Query: 449 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK------- 501
G ++ SYN ++ + A + M + + P + ++ L+S ++K
Sbjct: 364 GCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKC 423
Query: 502 EQSNFEMVERLFTREMNVACALFQEMSRIG----------------CLPNLYTYTCLIDG 545
E EM E + V ++ R+G C ++ TY LI+
Sbjct: 424 EAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINI 483
Query: 546 FCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
+ K +++ +LF E+K K PDVVT+T I Y + + ++F EM + D
Sbjct: 484 YGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPD 543
Query: 606 DGIKKL 611
G K+
Sbjct: 544 GGTAKV 549
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/294 (19%), Positives = 127/294 (43%), Gaps = 12/294 (4%)
Query: 312 CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 371
CFN +I + Q+ EA + ++ SR P +Y +L+ A+C G +
Sbjct: 157 CFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEM 216
Query: 372 XXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 431
+ P + T + +K + +++++V+ M ++ +P T N ++ ++ +
Sbjct: 217 QNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGK 276
Query: 432 EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 491
+ + L + N +Y +++ +E + A E+ ++ + + P V
Sbjct: 277 ASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYV 336
Query: 492 YSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 551
Y+ L+ +++ + E +F M +GC P+ +Y ++D + +
Sbjct: 337 YNALMESYSRAGYPYGAAE------------IFSLMQHMGCEPDRASYNIMVDAYGRAGL 384
Query: 552 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
A +F+EMKR GI P + ++ +L++ Y K + + + EM N + D
Sbjct: 385 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPD 438
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/404 (20%), Positives = 167/404 (41%), Gaps = 33/404 (8%)
Query: 176 VFNVLIKVFASNSMLEHAHQVFV-------SAKNVGLELHIRSCNFLLKCLXXXXXXXXX 228
+ +LIK + ++E A V V S K +G+ ++ N ++ L
Sbjct: 192 TYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVY----NAYIEGLMKRKGNTEE 247
Query: 229 XXXXXXLMETGPL-PNIHTYTIMMSCGDIRLAAEILGKIY---RSGG-NPTVVTYGTYIR 283
M+ P TY +M++ + + K+Y RS P + TY +
Sbjct: 248 AIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVN 307
Query: 284 GLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFP 343
G + A ++ +L + + +NA++ + + G A E+ M+ P
Sbjct: 308 AFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEP 367
Query: 344 DVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKS 403
D SYN++++A+ + G I P++ S +LL K + + K
Sbjct: 368 DRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTM---KSHMLLLSAYSKARDV-TKC 423
Query: 404 LEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHM 463
+ M +N + P+T + N +L ++ R GQF + +L + + +YN +I++
Sbjct: 424 EAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINI 483
Query: 464 ICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACAL 523
K + + EL + ++N P VV +++ I +++ ++L+ + + V
Sbjct: 484 YGKAGFLERIEELFVELKEKNFRPDVVTWTSRIGAYSR--------KKLYVKCLEV---- 531
Query: 524 FQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 567
F+EM GC P+ T L+ + ++ T + M KG+
Sbjct: 532 FEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRTM-HKGV 574
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 116/268 (43%), Gaps = 22/268 (8%)
Query: 336 MKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKL 394
++ S PDV +N+L++A+ +K + P+ Y LI C +
Sbjct: 146 LRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYC---M 202
Query: 395 KGQQLYDKSLEVYNSMLQNAIRPNTIICN----HILRVHCREGQFREALTLLEDFHEQGI 450
G L +++ V M + + P TI +I + R+G EA+ + +
Sbjct: 203 AG--LIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRC 260
Query: 451 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 510
+YN +I++ K S M+ +L M P + Y+ L++ FA+E + E
Sbjct: 261 KPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREG----LCE 316
Query: 511 RLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPD 570
+ A +F+++ G P++Y Y L++ + + Y A ++F M+ G PD
Sbjct: 317 K--------AEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPD 368
Query: 571 VVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
+Y +++ Y + G + +F EMK
Sbjct: 369 RASYNIMVDAYGRAGLHSDAEAVFEEMK 396
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 123/303 (40%), Gaps = 12/303 (3%)
Query: 153 YCKCDDSFEQFSTLLDLPHH----SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELH 208
Y K S+ + ++ H ++ + L+ FA + E A ++F + GLE
Sbjct: 274 YGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPD 333
Query: 209 IRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC-GDIRL---AAEILG 264
+ N L++ + G P+ +Y IM+ G L A +
Sbjct: 334 VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE 393
Query: 265 KIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRG 324
++ R G PT+ ++ + + V +V+++ ++ N++++ + + G
Sbjct: 394 EMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLG 453
Query: 325 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYT 384
+ ++L EM++ D+ +YN+L+N + K G + +P +V +T
Sbjct: 454 QFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 513
Query: 385 SLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 444
S I K +LY K LEV+ M+ + P+ +L E Q + ++L
Sbjct: 514 SRIGAYSRK----KLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQVEQVTSVLRT 569
Query: 445 FHE 447
H+
Sbjct: 570 MHK 572
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 141/327 (43%), Gaps = 20/327 (6%)
Query: 270 GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEA 329
G + + + L + ++ AH++ KL + P ++ FN +IHGFC+ ++A
Sbjct: 234 GVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKP-DARTFNILIHGFCKARKFDDA 292
Query: 330 LEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL 389
+++ MK + PDV +Y + A+CK+GD P++V YT +
Sbjct: 293 RAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYT----I 348
Query: 390 CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQG 449
+ L + ++L VY M ++ P+ + ++ + + G+F++A + ED QG
Sbjct: 349 VMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQG 408
Query: 450 INLNQYSYNEIIHMICKESYPKMALELMPRMLKR---NVLPGVVNYSTLISGFAKEQSNF 506
+ + YN +I S +MAL L+ RM + P V Y+ L+ ++
Sbjct: 409 VRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKK-- 466
Query: 507 EMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKG 566
M + L M + ++ TY LI G C ++ A F+E RKG
Sbjct: 467 ----------MKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKG 516
Query: 567 IFPDVVTYTVLIAWYHKHGRIGEKNKL 593
+ P T +L+ K K K+
Sbjct: 517 MVPRDSTCKMLVDELEKKNMAEAKLKI 543
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 161/390 (41%), Gaps = 39/390 (10%)
Query: 237 ETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNP--TVVTYGTYIRGLCECG- 289
+TG + + HTY M+ C + L E++ ++ ++ + T+ T +R L + G
Sbjct: 159 QTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGK 218
Query: 290 ---YVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 346
VD ++ + K + N+++ + ++ A EV ++ + PD
Sbjct: 219 YNKAVDAFLEMEKSYGVKTDTI---AMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDAR 274
Query: 347 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLE 405
++N+L++ FCK + P +V YTS + CK + + + E
Sbjct: 275 TFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCK-----EGDFRRVNE 329
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
+ M +N PN + ++ + Q EAL + E E G + Y+ +IH++
Sbjct: 330 MLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILS 389
Query: 466 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQ 525
K K A E+ M + V V+ Y+T+IS A S EM RL R +
Sbjct: 390 KTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISA-ALHHSRDEMALRLLKR--------ME 440
Query: 526 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
+ C PN+ TY L+ C + L L M + + DV TY +LI G
Sbjct: 441 DEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSG 500
Query: 586 RIGEKNKLFGEMKANCILLDDGIKKLQDPK 615
++ E C+ ++ ++K P+
Sbjct: 501 KVEEA----------CLFFEEAVRKGMVPR 520
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 6/206 (2%)
Query: 153 YCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSC 212
Y K D+F + + ++ N L+ + +EHAH+VF+ + ++ R+
Sbjct: 219 YNKAVDAFLEMEKSYGVKTDTI-AMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTF 276
Query: 213 NFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYR 268
N L+ + T P++ TYT + GD R E+L ++
Sbjct: 277 NILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRE 336
Query: 269 SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 328
+G NP VVTY + L + V A + K+ ++ ++++IH + G +
Sbjct: 337 NGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKD 396
Query: 329 ALEVLEEMKSSRTFPDVYSYNMLLNA 354
A E+ E+M + DV YN +++A
Sbjct: 397 AAEIFEDMTNQGVRRDVLVYNTMISA 422
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 119/527 (22%), Positives = 201/527 (38%), Gaps = 66/527 (12%)
Query: 83 VPETNRELFHVVVRVIKSLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLE 142
VPE + L + V+ K L + +F W E G +I H H++
Sbjct: 112 VPEWDHSLVYNVLHGAKKLEHAL----QFFRWTERSG---------LIRHD---RDTHMK 155
Query: 143 VFALLRDI--VGYCKCDDSFEQFSTLLDLPHHSVL----VFNVLIKVFASNSMLEHAHQV 196
+ +L ++ + + +C LLD+P V +F VLI+ + +++ + ++
Sbjct: 156 MIKMLGEVSKLNHARC--------ILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKI 207
Query: 197 FVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCGDI 256
F K++G+E I+S N L K + ++ G P HTY +M+ +
Sbjct: 208 FQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFL 267
Query: 257 RLAAEILGKIYRS----GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHC-KLHPLNSH 311
L E + + G +P T+ T I G C +D A KL ++ K+ P +
Sbjct: 268 SLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGP-SVV 326
Query: 312 CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 371
+ +I G+ V++ L + EEM+SS P+ +Y+ LL C G +
Sbjct: 327 SYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNM 386
Query: 372 XXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 431
I P N L LL G + EV +M + ++ C+
Sbjct: 387 MAKHIAPKD-NSIFLKLLVSQSKAGDMA--AATEVLKAMATLNVPAEAGHYGVLIENQCK 443
Query: 432 EGQFREALTLLEDF--------HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKR 483
+ A+ LL+ H+ + + +YN II +C A L +++KR
Sbjct: 444 ASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKR 503
Query: 484 NVLPGVVNYSTLISGFAKE---QSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYT 540
V + LI G AKE S++E + + MSR G Y
Sbjct: 504 GVQDQDA-LNNLIRGHAKEGNPDSSYE---------------ILKIMSRRGVPRESNAYE 547
Query: 541 CLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 587
LI + A D M G PD + +I + GR+
Sbjct: 548 LLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDGRV 594
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 84/178 (47%), Gaps = 12/178 (6%)
Query: 425 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 484
++ + + G +E++ + + + G+ SYN + +I + MA +M+
Sbjct: 191 LIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEG 250
Query: 485 VLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLID 544
V P Y+ ++ GF + + A F++M G P+ T+ +I+
Sbjct: 251 VEPTRHTYNLMLWGF------------FLSLRLETALRFFEDMKTRGISPDDATFNTMIN 298
Query: 545 GFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
GFC+ +D A +LF EMK I P VV+YT +I Y R+ + ++F EM+++ I
Sbjct: 299 GFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGI 356
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 12/205 (5%)
Query: 402 KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEII 461
+S++++ M + N + +V R G++ A +G+ +++YN ++
Sbjct: 203 ESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLML 262
Query: 462 HMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVAC 521
+ AL M R + P ++T+I+GF + ++M+ A
Sbjct: 263 WGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCR------------FKKMDEAE 310
Query: 522 ALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWY 581
LF EM P++ +YT +I G+ +D +D ++F+EM+ GI P+ TY+ L+
Sbjct: 311 KLFVEMKGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGL 370
Query: 582 HKHGRIGEKNKLFGEMKANCILLDD 606
G++ E + M A I D
Sbjct: 371 CDAGKMVEAKNILKNMMAKHIAPKD 395
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/322 (20%), Positives = 119/322 (36%), Gaps = 52/322 (16%)
Query: 277 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 336
T+ I+ L E ++ A ++ + K P + F +I + + G V E++++ ++M
Sbjct: 152 THMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDMFVVLIESYGKAGIVQESVKIFQKM 211
Query: 337 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 396
K + SYN L ++G
Sbjct: 212 KDLGVERTIKSYNSLFKVILRRG------------------------------------- 234
Query: 397 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 456
Y + +N M+ + P N +L + AL ED +GI+ + +
Sbjct: 235 --RYMMAKRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDAT 292
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRE 516
+N +I+ C+ A +L M + P VV+Y+T+I G+ L
Sbjct: 293 FNTMINGFCRFKKMDEAEKLFVEMKGNKIGPSVVSYTTMIKGY------------LAVDR 340
Query: 517 MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFP-DVVTYT 575
++ +F+EM G PN TY+ L+ G C + A + M K I P D +
Sbjct: 341 VDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFL 400
Query: 576 VLIAWYHKHGRIGEKNKLFGEM 597
L+ K G + ++ M
Sbjct: 401 KLLVSQSKAGDMAAATEVLKAM 422
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 142/330 (43%), Gaps = 59/330 (17%)
Query: 274 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL 333
T Y ++ ECG +L+ ++ +P + FN +I C G A +V+
Sbjct: 151 TANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVV 207
Query: 334 EEMKSSRTF---PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLC 390
E+ S+TF P +SYN +L++
Sbjct: 208 EQFIKSKTFNYRPYKHSYNAILHS------------------------------------ 231
Query: 391 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 450
L G + Y VY ML++ P+ + N ++ + R G+ LL++ + G
Sbjct: 232 ---LLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGF 288
Query: 451 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 510
+ + Y+YN ++H + + P AL L+ M + V PGV++++TLI G ++ E
Sbjct: 289 SPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSR-AGKLE--- 344
Query: 511 RLFTREMNVACALF-QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFP 569
AC F E ++GC P++ YT +I G+ ++ A ++F EM KG P
Sbjct: 345 ---------ACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLP 395
Query: 570 DVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 599
+V TY +I + G+ E L EM++
Sbjct: 396 NVFTYNSMIRGFCMAGKFKEACALLKEMES 425
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/331 (21%), Positives = 125/331 (37%), Gaps = 28/331 (8%)
Query: 249 IMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPL 308
I CG+ + ++ ++ + G T T+ I C CG +A +V + K
Sbjct: 161 IFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQF-IKSKTF 216
Query: 309 N----SHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXX 364
N H +NA++H V E+M PDV +YN+++ A + G
Sbjct: 217 NYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRL 276
Query: 365 XXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIIC 422
P + Y L+ L NK +L + N M + + P I
Sbjct: 277 YRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLA------ALNLLNHMREVGVEPGVIHF 330
Query: 423 NHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLK 482
++ R G+ +++ + G + Y +I + A E+ M +
Sbjct: 331 TTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTE 390
Query: 483 RNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCL 542
+ LP V Y+++I GF + ACAL +EM GC PN Y+ L
Sbjct: 391 KGQLPNVFTYNSMIRGFC------------MAGKFKEACALLKEMESRGCNPNFVVYSTL 438
Query: 543 IDGFCKIDYIDLATQLFDEMKRKGIFPDVVT 573
++ + A ++ +M KG + +++
Sbjct: 439 VNNLKNAGKVLEAHEVVKDMVEKGHYVHLIS 469
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/380 (18%), Positives = 138/380 (36%), Gaps = 59/380 (15%)
Query: 110 KFGSWVETH-GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLD 168
KF W F H+ N + +++ FA G + + L+ +++ D +
Sbjct: 137 KFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMI-----KDGYPT------ 185
Query: 169 LPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXX 228
+ FN+LI + + F+ +K + S N +L L
Sbjct: 186 ----TACTFNLLICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLI 241
Query: 229 XXXXXXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRG 284
++E G P++ TY I+M G +L ++ + G +P + TY
Sbjct: 242 DWVYEQMLEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTY------ 295
Query: 285 LCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 344
N ++H AL +L M+ P
Sbjct: 296 -----------------------------NILLHHLATGNKPLAALNLLNHMREVGVEPG 326
Query: 345 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSL 404
V + L++ + G + P +V YT +I + G +L +K+
Sbjct: 327 VIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMI---TGYISGGEL-EKAE 382
Query: 405 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
E++ M + PN N ++R C G+F+EA LL++ +G N N Y+ +++ +
Sbjct: 383 EMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNL 442
Query: 465 CKESYPKMALELMPRMLKRN 484
A E++ M+++
Sbjct: 443 KNAGKVLEAHEVVKDMVEKG 462
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 143/318 (44%), Gaps = 18/318 (5%)
Query: 254 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 313
G+ A I ++ G + + LC+ V+ A ++ +L + P N+H F
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITP-NAHTF 227
Query: 314 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 373
N IHG+C+ V EAL ++EMK P V SY ++ +C++ +
Sbjct: 228 NIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEA 287
Query: 374 CQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREG 433
P+ + YT+++ + L Q+ ++++L V M ++ +P+++ N ++ R G
Sbjct: 288 NGSPPNSITYTTIM----SSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAG 343
Query: 434 QFREALTLLE-DFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL-PGVVN 491
+ EA + + E G+++N +YN +I M C A+EL+ M N+ P V
Sbjct: 344 RLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHT 403
Query: 492 YSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 551
Y L+ K E+ + L +EM L + S TYT LI C+ +
Sbjct: 404 YQPLLRSCFKRGDVVEVGKLL--KEMVTKHHLSLDES---------TYTFLIQRLCRANM 452
Query: 552 IDLATQLFDEMKRKGIFP 569
+ A LF+EM + I P
Sbjct: 453 CEWAYCLFEEMISQDITP 470
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 137/353 (38%), Gaps = 64/353 (18%)
Query: 258 LAAEILGK----------IYRSGGNP--TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKL 305
+A +ILGK + R G+ T+ T +R G + A + +L
Sbjct: 126 MAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFG 185
Query: 306 HPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXX 365
N+ N ++ C+ V +A VL ++KS T P+ +++N+ ++ +CK V
Sbjct: 186 LEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHIT-PNAHTFNIFIHGWCKANRV---- 240
Query: 366 XXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHI 425
+++L M + RP I I
Sbjct: 241 -----------------------------------EEALWTIQEMKGHGFRPCVISYTTI 265
Query: 426 LRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV 485
+R +C++ +F + +L + G N +Y I+ + + + AL + RM +
Sbjct: 266 IRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGC 325
Query: 486 LPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDG 545
P + Y+ LI A+ E ER+F EM +G N TY +I
Sbjct: 326 KPDSLFYNCLIHTLAR-AGRLEEAERVFR----------VEMPELGVSINTSTYNSMIAM 374
Query: 546 FCKIDYIDLATQLFDEMKRKGI-FPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
+C D D A +L EM+ + PDV TY L+ K G + E KL EM
Sbjct: 375 YCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEM 427
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 13/191 (6%)
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
L++ I PN N + C+ + EAL +++ G SY II C++
Sbjct: 216 LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI 530
E++ M P + Y+T++S Q FE R+ TR M R
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSL-NAQKEFEEALRVATR-----------MKRS 323
Query: 531 GCLPNLYTYTCLIDGFCKIDYIDLATQLFD-EMKRKGIFPDVVTYTVLIAWYHKHGRIGE 589
GC P+ Y CLI + ++ A ++F EM G+ + TY +IA Y H +
Sbjct: 324 GCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDK 383
Query: 590 KNKLFGEMKAN 600
+L EM+++
Sbjct: 384 AIELLKEMESS 394
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 143/318 (44%), Gaps = 18/318 (5%)
Query: 254 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 313
G+ A I ++ G + + LC+ V+ A ++ +L + P N+H F
Sbjct: 169 GEWEEAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHITP-NAHTF 227
Query: 314 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 373
N IHG+C+ V EAL ++EMK P V SY ++ +C++ +
Sbjct: 228 NIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEA 287
Query: 374 CQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREG 433
P+ + YT+++ + L Q+ ++++L V M ++ +P+++ N ++ R G
Sbjct: 288 NGSPPNSITYTTIM----SSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAG 343
Query: 434 QFREALTLLE-DFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL-PGVVN 491
+ EA + + E G+++N +YN +I M C A+EL+ M N+ P V
Sbjct: 344 RLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHT 403
Query: 492 YSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 551
Y L+ K E+ + L +EM L + S TYT LI C+ +
Sbjct: 404 YQPLLRSCFKRGDVVEVGKLL--KEMVTKHHLSLDES---------TYTFLIQRLCRANM 452
Query: 552 IDLATQLFDEMKRKGIFP 569
+ A LF+EM + I P
Sbjct: 453 CEWAYCLFEEMISQDITP 470
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 137/353 (38%), Gaps = 64/353 (18%)
Query: 258 LAAEILGK----------IYRSGGNP--TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKL 305
+A +ILGK + R G+ T+ T +R G + A + +L
Sbjct: 126 MAVDILGKAKKWDRMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFG 185
Query: 306 HPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXX 365
N+ N ++ C+ V +A VL ++KS T P+ +++N+ ++ +CK V
Sbjct: 186 LEKNTESMNLLLDTLCKEKRVEQARVVLLQLKSHIT-PNAHTFNIFIHGWCKANRV---- 240
Query: 366 XXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHI 425
+++L M + RP I I
Sbjct: 241 -----------------------------------EEALWTIQEMKGHGFRPCVISYTTI 265
Query: 426 LRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV 485
+R +C++ +F + +L + G N +Y I+ + + + AL + RM +
Sbjct: 266 IRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGC 325
Query: 486 LPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDG 545
P + Y+ LI A+ E ER+F EM +G N TY +I
Sbjct: 326 KPDSLFYNCLIHTLAR-AGRLEEAERVFR----------VEMPELGVSINTSTYNSMIAM 374
Query: 546 FCKIDYIDLATQLFDEMKRKGI-FPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
+C D D A +L EM+ + PDV TY L+ K G + E KL EM
Sbjct: 375 YCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEM 427
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 13/191 (6%)
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
L++ I PN N + C+ + EAL +++ G SY II C++
Sbjct: 216 LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEF 275
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI 530
E++ M P + Y+T++S Q FE R+ TR M R
Sbjct: 276 IKVYEMLSEMEANGSPPNSITYTTIMSSL-NAQKEFEEALRVATR-----------MKRS 323
Query: 531 GCLPNLYTYTCLIDGFCKIDYIDLATQLFD-EMKRKGIFPDVVTYTVLIAWYHKHGRIGE 589
GC P+ Y CLI + ++ A ++F EM G+ + TY +IA Y H +
Sbjct: 324 GCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDK 383
Query: 590 KNKLFGEMKAN 600
+L EM+++
Sbjct: 384 AIELLKEMESS 394
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 182/441 (41%), Gaps = 35/441 (7%)
Query: 171 HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXX 230
+ VL +NV+IK + + E A +F KN G + N L + L
Sbjct: 512 RNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQR 571
Query: 231 XXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLC 286
++++G P TY M++ G + A ++ + ++G P V YG+ I G
Sbjct: 572 ILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFA 631
Query: 287 ECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 346
E G V+ A + R + N ++I + + G + EA V ++MK S PDV
Sbjct: 632 ESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVA 691
Query: 347 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEV 406
+ N +L + C + + ++++ +++ L KG + D+++EV
Sbjct: 692 ASNSML-SLCADLGIVSEAESIFNALREKGTCDVISFATMMYL----YKGMGMLDEAIEV 746
Query: 407 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLL-EDFHEQGINLNQYSYNEIIHMIC 465
M ++ + + N ++ + +GQ E L E E+ + L+ ++ + ++
Sbjct: 747 AEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLK 806
Query: 466 KESYPKMA---LELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACA 522
K P A L+ K P + +TL S E + L + E+
Sbjct: 807 KGGVPSEAVSQLQTAYNEAKPLATPAIT--ATLFSAMGLYAYALESCQELTSGEIPREHF 864
Query: 523 LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYH 582
+ + +YTY+ D ID+A + + M+ KG+ PD+VT L+ Y
Sbjct: 865 AYNAV--------IYTYSASGD-------IDMALKAYMRMQEKGLEPDIVTQAYLVGIYG 909
Query: 583 KHGRIGEKNKL-----FGEMK 598
K G + ++ FGE++
Sbjct: 910 KAGMVEGVKRVHSRLTFGELE 930
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 159/427 (37%), Gaps = 55/427 (12%)
Query: 176 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 235
FN LI ++ L A +F G+ + + N ++ +
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 236 METGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 291
E G P+ TY I++S GDI A E KI + G P VT+
Sbjct: 367 EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTH------------- 413
Query: 292 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 351
AV+H CQR V E V+ EM + D +S ++
Sbjct: 414 ----------------------RAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVI 451
Query: 352 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML 411
+ + +G V +++ T+L + + + Y
Sbjct: 452 MQMYVNEGLVVQAKALFERFQL----DCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRN 507
Query: 412 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 471
+ R + + N +++ + + +AL+L + QG ++ +YN + M+
Sbjct: 508 MSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVD 567
Query: 472 MALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIG 531
A ++ ML PG Y+ +I+ + RL ++ A L++ M + G
Sbjct: 568 EAQRILAEMLDSGCKPGCKTYAAMIASYV----------RLGL--LSDAVDLYEAMEKTG 615
Query: 532 CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKN 591
PN Y LI+GF + ++ A Q F M+ G+ + + T LI Y K G + E
Sbjct: 616 VKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEAR 675
Query: 592 KLFGEMK 598
+++ +MK
Sbjct: 676 RVYDKMK 682
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 121/319 (37%), Gaps = 27/319 (8%)
Query: 307 PLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXX 366
P + FN +I + + G +N+A + EM S D ++N +++ G +
Sbjct: 302 PRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAES 361
Query: 367 XXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHIL 426
I P Y ILL + G + +LE Y + + + P+T+ +L
Sbjct: 362 LLKKMEEKGISPDTKTYN--ILLSLHADAGD--IEAALEYYRKIRKVGLFPDTVTHRAVL 417
Query: 427 RVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPR-----ML 481
+ C+ E ++ + I ++++S I+ M E A L R +L
Sbjct: 418 HILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVL 477
Query: 482 KRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNV------------------ACAL 523
L V++ + + ++ F + + +V A +L
Sbjct: 478 SSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSL 537
Query: 524 FQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHK 583
F+ M G P+ TY L +D +D A ++ EM G P TY +IA Y +
Sbjct: 538 FKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVR 597
Query: 584 HGRIGEKNKLFGEMKANCI 602
G + + L+ M+ +
Sbjct: 598 LGLLSDAVDLYEAMEKTGV 616
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 153/371 (41%), Gaps = 23/371 (6%)
Query: 240 PLPNIHT--YTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 297
P I+T I G + A ++ ++ R+G +PTV TY I+GL + G VD A+
Sbjct: 266 PTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGF 325
Query: 298 VRK-LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA-F 355
+ L L P + N +++ + G V E V EM R P V SYN ++ A F
Sbjct: 326 YKDMLRDGLTP-DVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALF 384
Query: 356 CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNA 414
K V + PS Y+ LI CK +K+L + M +
Sbjct: 385 ESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKT-----NRVEKALLLLEEMDEKG 439
Query: 415 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 474
P ++ + ++ A L ++ E N++ Y +I K A+
Sbjct: 440 FPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAV 499
Query: 475 ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLP 534
+L M + P V Y+ L+SG K +N A +L ++M GC
Sbjct: 500 DLFNEMKNQGSGPDVYAYNALMSGMVKAGM------------INEANSLLRKMEENGCRA 547
Query: 535 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
++ ++ +++GF + A ++F+ +K GI PD VTY L+ + G E ++
Sbjct: 548 DINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMM 607
Query: 595 GEMKANCILLD 605
EMK D
Sbjct: 608 REMKDKGFEYD 618
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 110/523 (21%), Positives = 214/523 (40%), Gaps = 41/523 (7%)
Query: 92 HVVVRVIKSLNWKIAREKKFGSWV-ETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDI 150
H +VR I ++ +I + +F W + F H + + +I A ++ E++ ++++
Sbjct: 93 HRLVRSILEIDVEINVKIQFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEV 152
Query: 151 VGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIR 210
V +T + + S V + L+K M+ A VF AK +
Sbjct: 153 VR-----------NTYVSV---SPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSS 198
Query: 211 SCNFLLKCLXXXXXXXXXXXXXXXLMETGP-LPNIHTYTIMMSC----GDIRLAAEILGK 265
+ N ++ L + G P+ TY+ ++S G A + +
Sbjct: 199 TYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDE 258
Query: 266 IYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGA 325
+ + PT Y T + + G V+ A L ++ + + +I G + G
Sbjct: 259 MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGR 318
Query: 326 VNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTS 385
V+EA ++M PDV N L+N K G V + P++V+Y +
Sbjct: 319 VDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNT 378
Query: 386 LILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 445
+I K + + + ++ M +++ P+ + ++ +C+ + +AL LLE+
Sbjct: 379 VI---KALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEM 435
Query: 446 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN---YSTLISGFAKE 502
E+G +Y +I+ + K + A EL + LK N G V+ Y+ +I F K
Sbjct: 436 DEKGFPPCPAAYCSLINALGKAKRYEAANELF-KELKENF--GNVSSRVYAVMIKHFGK- 491
Query: 503 QSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM 562
+++ A LF EM G P++Y Y L+ G K I+ A L +M
Sbjct: 492 -----------CGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKM 540
Query: 563 KRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
+ G D+ ++ +++ + + G ++F +K + I D
Sbjct: 541 EENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPD 583
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/351 (20%), Positives = 144/351 (41%), Gaps = 24/351 (6%)
Query: 119 GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFN 178
G S +V + +I AG E + +D+ L D V+ N
Sbjct: 298 GCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM---------------LRDGLTPDVVFLN 342
Query: 179 VLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMET 238
L+ + +E VF + S N ++K L M+
Sbjct: 343 NLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKA 402
Query: 239 GPL-PNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDV 293
+ P+ TY+I++ C R+ A +L ++ G P Y + I L + +
Sbjct: 403 DSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEA 462
Query: 294 AHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLN 353
A++L ++L ++S + +I F + G ++EA+++ EMK+ + PDVY+YN L++
Sbjct: 463 ANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMS 522
Query: 354 AFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQN 413
K G + + I N ++IL N + +++E++ ++ +
Sbjct: 523 GMVKAGMINEANSLLRKMEENGCRADI-NSHNIIL---NGFARTGVPRRAIEMFETIKHS 578
Query: 414 AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
I+P+ + N +L G F EA ++ + ++G + +Y+ I+ +
Sbjct: 579 GIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAV 629
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 158/366 (43%), Gaps = 37/366 (10%)
Query: 277 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 336
+Y + I L + D +++R + + F +I + + G+V++A++V ++
Sbjct: 83 SYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKI 142
Query: 337 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 396
S + S N L+N G++ +++P+ V++ LI +K
Sbjct: 143 TSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCD- 201
Query: 397 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 456
++ + +V++ ML+ ++P+ + N ++ CR +A +LLED ++ I N +
Sbjct: 202 ---WEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVT 258
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK----EQSNF---EMV 509
+ ++ +C + A +LM M R PG+VNY L+S K +++ EM
Sbjct: 259 FGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMK 318
Query: 510 ERLFTREMNV----------------ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 553
+R ++ + A + EM GC PN TY +IDGFC+I+ D
Sbjct: 319 KRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFD 378
Query: 554 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI----------GEKNKLFGEMKANCIL 603
+ + M P T+ ++A K G + G+KN FG +L
Sbjct: 379 SGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLL 438
Query: 604 LDDGIK 609
D IK
Sbjct: 439 SDLCIK 444
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/271 (22%), Positives = 103/271 (38%), Gaps = 35/271 (12%)
Query: 172 HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXX 231
++ N LI V N LE A F AK++ L + S N L+K
Sbjct: 149 RTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIK-------------- 194
Query: 232 XXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 291
+ C D A ++ ++ P+VVTY + I LC +
Sbjct: 195 ----------------GFLDKC-DWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDM 237
Query: 292 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 351
A L+ + K N+ F ++ G C +G NEA +++ +M+ P + +Y +L
Sbjct: 238 GKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGIL 297
Query: 352 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML 411
++ K+G + +IKP +V Y L+ N L + ++ V M
Sbjct: 298 MSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILV----NHLCTECRVPEAYRVLTEMQ 353
Query: 412 QNAIRPNTIICNHILRVHCREGQFREALTLL 442
+PN ++ CR F L +L
Sbjct: 354 MKGCKPNAATYRMMIDGFCRIEDFDSGLNVL 384
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 112/283 (39%), Gaps = 17/283 (6%)
Query: 89 ELFHVV-----VRVIKSLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEV 143
++FH + VR I+SLN I G + F R+ ++ +
Sbjct: 137 DVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFN------ 190
Query: 144 FALLRDIVGYCKCDDSFEQFSTLLDLP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKN 202
L++ + C + + + F +L++ SV+ +N LI N + A +
Sbjct: 191 -ILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIK 249
Query: 203 VGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRL 258
+ + + L+K L + G P + Y I+MS G I
Sbjct: 250 KRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDE 309
Query: 259 AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIH 318
A +LG++ + P VV Y + LC V A++++ ++ K N+ + +I
Sbjct: 310 AKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMID 369
Query: 319 GFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDV 361
GFC+ + L VL M +SR P ++ ++ K G++
Sbjct: 370 GFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNL 412
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/443 (20%), Positives = 178/443 (40%), Gaps = 88/443 (19%)
Query: 209 IRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCGDIRLA----AEILG 264
+RS L+ L L ETG P++ +YT +++ ++ + I+
Sbjct: 45 VRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVS 104
Query: 265 KIYRSGGNPTVVTYGTYIRGLCECGYV-DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQR 323
++ +SG + + I E G + D L++ L+P S +N +I G+
Sbjct: 105 EVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTS-TYNTLIKGYGIA 163
Query: 324 GAVNEALEVLE---EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 380
G + E+L+ E + P++ ++N+L+ A+CKK V C ++P
Sbjct: 164 GKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDT 223
Query: 381 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 440
V Y + I C + KG+ + +S V +++ +PN C ++ +CREG+ R+ L
Sbjct: 224 VTYNT-IATCYVQ-KGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLR 281
Query: 441 LLEDFHEQGINLNQY----------------------------SYNEIIHMICKESYPKM 472
+ E + N S+NE + ++ + KM
Sbjct: 282 FVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQ---KM 338
Query: 473 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGC 532
++++ M + NV V+ YST+++ ++ M A +F+EM + G
Sbjct: 339 KVQVLTLMKECNVKADVITYSTVMNAWSS------------AGYMEKAAQVFKEMVKAGV 386
Query: 533 LPNLYTY----------------------------------TCLIDGFCKIDYIDLATQL 558
P+ + Y T +I G+C +D A ++
Sbjct: 387 KPDAHAYSILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRV 446
Query: 559 FDEMKRKGIFPDVVTYTVLIAWY 581
F++M + G+ P++ T+ L+ Y
Sbjct: 447 FNKMCKFGVSPNIKTFETLMWGY 469
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/376 (20%), Positives = 155/376 (41%), Gaps = 86/376 (22%)
Query: 254 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV----RKLHCKLHPLN 309
G++ A + L K+ G NPT TY T I+G G + + +L+ + + + P N
Sbjct: 129 GNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGP-N 187
Query: 310 SHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXX 369
FN ++ +C++ V EA EV+++M+ PD +YN + + +KG+
Sbjct: 188 IRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGET-------- 239
Query: 370 XXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVH 429
+ +S V +++ +PN C ++ +
Sbjct: 240 -----------------------------VRAESEVVEKMVMKEKAKPNGRTCGIVVGGY 270
Query: 430 CREGQFREALTLLEDFHEQGINLN----------------------------QYSYNEII 461
CREG+ R+ L + E + N S+NE +
Sbjct: 271 CREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEV 330
Query: 462 HMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVAC 521
++ + KM ++++ M + NV V+ YST+++ ++ M A
Sbjct: 331 ELVGNQ---KMKVQVLTLMKECNVKADVITYSTVMNAWSS------------AGYMEKAA 375
Query: 522 ALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWY 581
+F+EM + G P+ + Y+ L G+ + A +L + + + P+VV +T +I+ +
Sbjct: 376 QVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGW 434
Query: 582 HKHGRIGEKNKLFGEM 597
+G + + ++F +M
Sbjct: 435 CSNGSMDDAMRVFNKM 450
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 159/370 (42%), Gaps = 79/370 (21%)
Query: 243 NIHTYTIMMSCGDIRLAA-----EILGKIYRS---GGNPTVVTYGTYIRGLCECGYVDVA 294
N TY ++++ R AA E +G R G + +V + + LC +V+ A
Sbjct: 177 NEKTYEVLLN----RYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVEFA 232
Query: 295 HKLV----RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
L R+ C + +N +++G+C G V+EA +++ +S+ PDV SY
Sbjct: 233 ETLFCSRRREFGCDIKAMN-----MILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGT 287
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
++NA KKG + K++E+Y +M
Sbjct: 288 MINALTKKGKLG---------------------------------------KAMELYRAM 308
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
P+ ICN+++ C + + EAL + + E+G + N +YN ++ +CK
Sbjct: 309 WDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRT 368
Query: 471 KMALELMPRMLKR--NVLPGVVNYSTLISGFAKEQSNFEMV-ERLFTREMNVACALFQEM 527
+ EL+ M + + P V +S L+ +++ + ++V ER+ + + L+ M
Sbjct: 369 EKVWELVEEMELKGGSCSPNDVTFSYLLK-YSQRSKDVDIVLERMAKNKCEMTSDLYNLM 427
Query: 528 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 587
R+ + + D + +++ EM+R G+ PD TYT+ I H G+I
Sbjct: 428 FRL---------------YVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHTKGKI 472
Query: 588 GEKNKLFGEM 597
GE F EM
Sbjct: 473 GEALSYFQEM 482
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 140/316 (44%), Gaps = 27/316 (8%)
Query: 236 METGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 291
+ GP P T+ I+ S G A ++ ++ G + ++ T + LC+ V
Sbjct: 120 LRIGPSPK--TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRV 177
Query: 292 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 351
+ A++L R L + +++ +N +++G+C +ALEVL+EM P++ +YN +
Sbjct: 178 EKAYELFRALRGRF-SVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTM 236
Query: 352 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLEVYNS 409
L F + G + + +V YT+++ ++K ++ V++
Sbjct: 237 LKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIK------RARNVFDE 290
Query: 410 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 469
M++ + P+ N +++V C++ A+ + E+ +G N +YN +I +
Sbjct: 291 MIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGE 350
Query: 470 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSR 529
ELM RM P Y+ +I +++ E+ A LF++M
Sbjct: 351 FSRGEELMQRMENEGCEPNFQTYNMMIRYYSE------------CSEVEKALGLFEKMGS 398
Query: 530 IGCLPNLYTYTCLIDG 545
CLPNL TY LI G
Sbjct: 399 GDCLPNLDTYNILISG 414
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 104/215 (48%), Gaps = 18/215 (8%)
Query: 384 TSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLE 443
T L +LCK+K +K+ E++ + L+ +T+ N IL C + +AL +L+
Sbjct: 166 TILDVLCKSKR-----VEKAYELFRA-LRGRFSVDTVTYNVILNGWCLIKRTPKALEVLK 219
Query: 444 DFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ 503
+ E+GIN N +YN ++ + + A E M KR+ VV Y+T++ GF
Sbjct: 220 EMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFG--- 276
Query: 504 SNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 563
E+ A +F EM R G LP++ TY +I CK D ++ A +F+EM
Sbjct: 277 ---------VAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMV 327
Query: 564 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
R+G P+V TY VLI G +L M+
Sbjct: 328 RRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRME 362
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 128/331 (38%), Gaps = 53/331 (16%)
Query: 273 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 332
P+ T+ G D A KL +H + FN ++ C+ V +A E+
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 333 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 392
++ R D +YN++LN +C ++ T
Sbjct: 184 FRALRG-RFSVDTVTYNVILNGWC-----------------------LIKRTP------- 212
Query: 393 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 452
K+LEV M++ I PN N +L+ R GQ R A + ++ +
Sbjct: 213 ---------KALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEI 263
Query: 453 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 512
+ +Y ++H K A + M++ VLP V Y+ +I K+ +
Sbjct: 264 DVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDN-------- 315
Query: 513 FTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
+ A +F+EM R G PN+ TY LI G +L M+ +G P+
Sbjct: 316 ----VENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQ 371
Query: 573 TYTVLIAWYHKHGRIGEKNKLFGEM-KANCI 602
TY ++I +Y + + + LF +M +C+
Sbjct: 372 TYNMMIRYYSECSEVEKALGLFEKMGSGDCL 402
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 85/191 (44%), Gaps = 5/191 (2%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
++ +N ++K F + HA + F+ K E+ + + ++
Sbjct: 229 NLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVF 288
Query: 233 XXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
++ G LP++ TY M+ ++ A + ++ R G P V TY IRGL
Sbjct: 289 DEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHA 348
Query: 289 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 348
G +L++++ + N +N +I + + V +AL + E+M S P++ +Y
Sbjct: 349 GEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTY 408
Query: 349 NMLLNA-FCKK 358
N+L++ F +K
Sbjct: 409 NILISGMFVRK 419
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 138/301 (45%), Gaps = 22/301 (7%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK-GDVXXXXXXXXXX 371
F +++ C+ V++A ++ K F D S+N++LN +C G
Sbjct: 235 FQSLLSALCRYKNVSDAGHLIFCNKDKYPF-DAKSFNIVLNGWCNVIGSPREAERVWMEM 293
Query: 372 XXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 431
+K +V+Y+S+I C +K G L +K L++++ M + I P+ + N ++ +
Sbjct: 294 GNVGVKHDVVSYSSMIS-CYSK--GGSL-NKVLKLFDRMKKECIEPDRKVYNAVVHALAK 349
Query: 432 EGQFREALTLLEDFHEQ-GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 490
EA L++ E+ GI N +YN +I +CK + A ++ ML++ + P +
Sbjct: 350 ASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIR 409
Query: 491 NYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 550
Y + + FE L +M ++GC P + TY LI C+
Sbjct: 410 TYHAFMRILRTGEEVFE---------------LLAKMRKMGCEPTVETYIMLIRKLCRWR 454
Query: 551 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKK 610
D L+DEMK K + PD+ +Y V+I +G+I E + EMK + ++ ++
Sbjct: 455 DFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVED 514
Query: 611 L 611
+
Sbjct: 515 M 515
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 6/187 (3%)
Query: 176 VFNVLIKVFASNSMLEHAHQVFVS-AKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 234
V+N ++ A S + A + + + G+E ++ + N L+K L
Sbjct: 339 VYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDE 398
Query: 235 LMETGPLPNIHTYTIMMSCGDIRLAAEI---LGKIYRSGGNPTVVTYGTYIRGLCECGYV 291
++E G P I TY M +R E+ L K+ + G PTV TY IR LC
Sbjct: 399 MLEKGLFPTIRTYHAFMRI--LRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDF 456
Query: 292 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 351
D L ++ K + + +IHG G + EA +EMK P+ +M+
Sbjct: 457 DNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMI 516
Query: 352 LNAFCKK 358
+ F K
Sbjct: 517 QSWFSGK 523
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 88/210 (41%), Gaps = 8/210 (3%)
Query: 254 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 313
G R A + ++ G VV+Y + I + G ++ KL ++ + + +
Sbjct: 281 GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVY 340
Query: 314 NAVIHGFCQRGAVNEALEVLEEMKSSRTF-PDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
NAV+H + V+EA +++ M+ + P+V +YN L+ CK
Sbjct: 341 NAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEML 400
Query: 373 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 432
+ P+I Y + + + + G++++ E+ M + P ++R CR
Sbjct: 401 EKGLFPTIRTYHAFMRILRT---GEEVF----ELLAKMRKMGCEPTVETYIMLIRKLCRW 453
Query: 433 GQFREALTLLEDFHEQGINLNQYSYNEIIH 462
F L L ++ E+ + + SY +IH
Sbjct: 454 RDFDNVLLLWDEMKEKTVGPDLSSYIVMIH 483
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 147/364 (40%), Gaps = 59/364 (16%)
Query: 277 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 336
YG I LC A ++V + K +NA+IHG C+ G A ++LEE
Sbjct: 309 AYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEG 368
Query: 337 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 396
FP Y+Y +L+ + CK+ D ++ + T + + L+G
Sbjct: 369 SEFEFFPSEYTYKLLMESLCKELDTGKARNVLEL----MLRKEGADRTRIYNI---YLRG 421
Query: 397 QQLYDKSLEVYN---SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI-NL 452
+ D E+ N SMLQ RP+ N ++ C+ G+ +A+ +L+D
Sbjct: 422 LCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAP 481
Query: 453 NQYSYNEIIHMICKESYPKMALELMPRMLKRN-VLPGVVNYSTLISGFAKEQSNFEMVER 511
+ + N ++ + + + AL+++ R++ N + PGVV Y+ +I G K E
Sbjct: 482 DAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDE---- 537
Query: 512 LFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE---------- 561
A ++F ++ + + TY +IDG C + +D+A + +D+
Sbjct: 538 --------AMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDA 589
Query: 562 -------------------------MKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE 596
+ G P+VV Y +IA + G E ++ E
Sbjct: 590 FVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEE 649
Query: 597 MKAN 600
M+ N
Sbjct: 650 MRKN 653
Score = 82.4 bits (202), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 93/415 (22%), Positives = 173/415 (41%), Gaps = 34/415 (8%)
Query: 190 LEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLM--ETGPLPNIHTY 247
+ AH+ F+ G R+CN ++ L L+ + +P++ Y
Sbjct: 106 FDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNY 165
Query: 248 TIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH- 302
+M+ C R+ A +++ + G P VVT+ T I G CE ++VAHK+ ++
Sbjct: 166 NRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRV 225
Query: 303 CKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM-----KSSRTFPDVYSYNMLLNAFCK 357
C + P NS + +I GF + V ++++E+ + T ++ L+++ C+
Sbjct: 226 CGIRP-NSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLVDSMCR 284
Query: 358 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIR 416
+G C+ Y +I LC+ + + + M ++
Sbjct: 285 EGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRN-----HGAARIVYIMKSKGLK 339
Query: 417 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 476
P N I+ C++G A LLE+ E ++Y+Y ++ +CKE A +
Sbjct: 340 PRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNV 399
Query: 477 MPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNL 536
+ ML++ Y+ + G + E+ +NV ++ Q C P+
Sbjct: 400 LELMLRKEGADRTRIYNIYLRGLCVMDNPTEI--------LNVLVSMLQG----DCRPDE 447
Query: 537 YTYTCLIDGFCKIDYIDLATQLFDEMKRKGIF--PDVVTYTVLIAWYHKHGRIGE 589
YT +I+G CK+ +D A ++ D+M G F PD VT ++ GR E
Sbjct: 448 YTLNTVINGLCKMGRVDDAMKVLDDMM-TGKFCAPDAVTLNTVMCGLLAQGRAEE 501
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 147/353 (41%), Gaps = 61/353 (17%)
Query: 235 LMETGP----LPNIHTYTIMMS--CG--DIRLAAEILGKIYRSGGNPTVVTYGTYIRGLC 286
L+E G P+ +TY ++M C D A +L + R G Y Y+RGLC
Sbjct: 364 LLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLC 423
Query: 287 ECGY-VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDV 345
++ + LV L P + + N VI+G C+ G V++A++VL+
Sbjct: 424 VMDNPTEILNVLVSMLQGDCRP-DEYTLNTVINGLCKMGRVDDAMKVLD----------- 471
Query: 346 YSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLE 405
+M+ FC P V ++ +C L Q +++L+
Sbjct: 472 ---DMMTGKFCA--------------------PDAVTLNTV--MCG--LLAQGRAEEALD 504
Query: 406 VYNSML-QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
V N ++ +N I+P + N ++R + + EA+++ + + + +Y II +
Sbjct: 505 VLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGL 564
Query: 465 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALF 524
C + MA + ++ + Y+ + G QS + ++ AC
Sbjct: 565 CVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLC--QSGY----------LSDACHFL 612
Query: 525 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 577
+++ G +PN+ Y +I + A Q+ +EM++ G PD VT+ +L
Sbjct: 613 YDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQAPDAVTWRIL 665
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 100/199 (50%), Gaps = 14/199 (7%)
Query: 401 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 460
D++L + + + RP+++ + ++ C G+F EA F G ++ + N I
Sbjct: 72 DEALRILDGLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVI 131
Query: 461 IHMICKESYPKMALELMPRML--KRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMN 518
I + P L ++ R++ K+ +P + NY+ L++ + + +++
Sbjct: 132 IARLLYSRSPVSTLGVIHRLIGFKKEFVPSLTNYNRLMNQLC---TIYRVID-------- 180
Query: 519 VACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 578
A L +M G LP++ T+T LI G+C+I +++A ++FDEM+ GI P+ +T +VLI
Sbjct: 181 -AHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLI 239
Query: 579 AWYHKHGRIGEKNKLFGEM 597
+ K + KL E+
Sbjct: 240 GGFLKMRDVETGRKLMKEL 258
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 141/333 (42%), Gaps = 34/333 (10%)
Query: 254 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVR--KLHCKL--HPLN 309
G + A E+ + G + +VVT + + G + A KL R +LH ++ +
Sbjct: 159 GLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLK------ARKLDRFWELHKEMVESEFD 212
Query: 310 SHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXX 369
S +I C G V+E E+L++ P Y Y L++ FC+ G+
Sbjct: 213 SERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLH 272
Query: 370 XXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVY---NSMLQNAIRPNTIICNHI 425
PS+ Y +I LC NK K LE Y ++ P+ ++ +
Sbjct: 273 TMIAWNHFPSMYIYQKIIKGLCMNK--------KQLEAYCIFKNLKDKGYAPDRVVYTTM 324
Query: 426 LRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV 485
+R C +G A L + ++G+ N+++YN +IH K + ML+
Sbjct: 325 IRGFCEKGWLGSARKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGY 384
Query: 486 LPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDG 545
+++ +T+I GF + E E +F+ MS G PN TY LI G
Sbjct: 385 GGTMLSCNTMIKGFCSHGKSDEAFE------------IFKNMSETGVTPNAITYNALIKG 432
Query: 546 FCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 578
FCK + ++ +L+ E+K G+ P + Y L+
Sbjct: 433 FCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/318 (21%), Positives = 131/318 (41%), Gaps = 6/318 (1%)
Query: 181 IKVFASNSMLEHAHQVFVSAKNVGLELHIRSCN-FLLKCLXXXXXXXXXXXXXXXLMETG 239
+K + ++E A +V+ K++G+ + +CN LL CL +
Sbjct: 152 VKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEF 211
Query: 240 PLPNIHTY-TIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 298
I + GD+ E+L + + G +P Y I G CE G +++
Sbjct: 212 DSERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVL 271
Query: 299 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
+ H + + + +I G C EA + + +K PD Y ++ FC+K
Sbjct: 272 HTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEK 331
Query: 359 GDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 418
G + ++P+ Y +++ + +G+ ++ YN ML+N
Sbjct: 332 GWLGSARKLWFEMIKKGMRPNEFAYN--VMIHGHFKRGEISLVEAF--YNEMLRNGYGGT 387
Query: 419 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMP 478
+ CN +++ C G+ EA + ++ E G+ N +YN +I CKE+ + L+L
Sbjct: 388 MLSCNTMIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYK 447
Query: 479 RMLKRNVLPGVVNYSTLI 496
+ + P + Y+ L+
Sbjct: 448 ELKALGLKPSGMAYAALV 465
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 103/225 (45%), Gaps = 18/225 (8%)
Query: 376 IKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 435
I S+V S++L C LK ++L D+ E++ M+++ I C ++R C G
Sbjct: 176 ISSSVVTCNSVLLGC---LKARKL-DRFWELHKEMVESEFDSERIRC--LIRALCDGGDV 229
Query: 436 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 495
E LL+ +QG++ QY Y ++I C+ E++ M+ N P + Y +
Sbjct: 230 SEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKI 289
Query: 496 ISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLA 555
I G + E A +F+ + G P+ YT +I GFC+ ++ A
Sbjct: 290 IKGLCMNKKQLE------------AYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSA 337
Query: 556 TQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 600
+L+ EM +KG+ P+ Y V+I + K G I + EM N
Sbjct: 338 RKLWFEMIKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRN 382
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 139/344 (40%), Gaps = 22/344 (6%)
Query: 235 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
+ E+G + YT ++S G + E+ ++ SG + T+G I G G
Sbjct: 493 VQESGMTADCKLYTTLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQ 552
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSR--TFPDVYSY 348
V A L K + FNA+I Q GAV+ A +VL EMK+ PD S
Sbjct: 553 VAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISI 612
Query: 349 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYN 408
L+ A C G V I+ + YT + C +D + +Y
Sbjct: 613 GALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGD----WDFACSIYK 668
Query: 409 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 468
M + + P+ + + ++ V EA +L+D QGI L SY+ ++ C
Sbjct: 669 DMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAK 728
Query: 469 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMS 528
K ALEL ++ + P + + LI+ + ++ A E+
Sbjct: 729 DWKKALELYEKIKSIKLRPTISTMNALITALCE------------GNQLPKAMEYLDEIK 776
Query: 529 RIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
+G PN TY+ L+ + D +++ +L + K G+ P+++
Sbjct: 777 TLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAKGDGVSPNLI 820
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 99/230 (43%), Gaps = 30/230 (13%)
Query: 398 QLYDKSLEVYNSMLQNAIRPNTIIC-NHILRVHCREGQFREALTLLEDFHEQGINLNQYS 456
Q ++ E++NS N P T N +LR +G+ ++ ++LLED ++ +
Sbjct: 385 QFPARNFELHNS---NGRSPETSDAYNRLLR----DGRIKDCISLLEDLDQRDLLDMDKI 437
Query: 457 YNEIIHMICK------ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK-----EQSN 505
Y+ CK E++ L L P M N+L V S I G ++S
Sbjct: 438 YHASFFKACKKQRAVKEAFRFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESG 497
Query: 506 FEMVERLFTREMNVACA----------LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLA 555
+L+T ++ +CA +F +MS G NL+T+ LIDG + + A
Sbjct: 498 MTADCKLYTTLIS-SCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKA 556
Query: 556 TQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
+ ++ K + PD V + LI+ + G + + EMKA +D
Sbjct: 557 FGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPID 606
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 148/314 (47%), Gaps = 30/314 (9%)
Query: 307 PLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXX 366
P N FN ++ C+ V +A EV E M+ R PD +Y++LL + K+ ++
Sbjct: 200 PPNLVAFNGLLSALCKSKNVRKAQEVFENMRD-RFTPDSKTYSILLEGWGKEPNLPKARE 258
Query: 367 XXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHI 425
P IV Y+ ++ +LCK G+ D++L + SM + +P T I + +
Sbjct: 259 VFREMIDAGCHPDIVTYSIMVDILCK---AGR--VDEALGIVRSMDPSICKPTTFIYSVL 313
Query: 426 LRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV 485
+ + E + EA+ + G+ + +N +I CK + K ++ M + V
Sbjct: 314 VHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 373
Query: 486 LPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDG 545
P + + ++ ++ER E + A +F++M ++ C P+ TYT +I
Sbjct: 374 TPNSKSCNIILR---------HLIER---GEKDEAFDVFRKMIKV-CEPDADTYTMVIKM 420
Query: 546 FCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
FC+ ++ A +++ M++KG+FP + T++VLI +G E+ + C+LL+
Sbjct: 421 FCEKKEMETADKVWKYMRKKGVFPSMHTFSVLI-----NGLCEERT-----TQKACVLLE 470
Query: 606 DGIKKLQDPKLVQF 619
+ I+ P V F
Sbjct: 471 EMIEMGIRPSGVTF 484
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/461 (21%), Positives = 182/461 (39%), Gaps = 80/461 (17%)
Query: 110 KFGSWVETHG-FSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLD 168
+F W E + HSV + ++I + A + + L+ D++ + +
Sbjct: 119 RFFQWSEKQRHYEHSVRAYHMMIESTA----KIRQYKLMWDLI------------NAMRK 162
Query: 169 LPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXX 228
+V F ++++ +A ++ A F + L ++ + N LL L
Sbjct: 163 KKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKA 222
Query: 229 XXXXXXLMETGPLPNIHTYTIMMSCG----DIRLAAEILGKIYRSGGNPTVVTYGTYIRG 284
M P+ TY+I++ ++ A E+ ++ +G +P +VTY +
Sbjct: 223 QEVFEN-MRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDI 281
Query: 285 LCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 344
LC+ G VD A +VR + + + ++ ++H + + EA++ EM+ S D
Sbjct: 282 LCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKAD 341
Query: 345 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSL 404
V +N L+ AFCK N++K +Y
Sbjct: 342 VAVFNSLIGAFCK---------------------------------ANRMKN--VY---- 362
Query: 405 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL---NQYSYNEII 461
V M + PN+ CN ILR G+ EA D + I + + +Y +I
Sbjct: 363 RVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAF----DVFRKMIKVCEPDADTYTMVI 418
Query: 462 HMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVAC 521
M C++ + A ++ M K+ V P + +S LI+G +E R AC
Sbjct: 419 KMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEE------------RTTQKAC 466
Query: 522 ALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM 562
L +EM +G P+ T+ L K + D+ L ++M
Sbjct: 467 VLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLNEKM 507
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 96/231 (41%), Gaps = 32/231 (13%)
Query: 397 QQLYDKSLEVYNSMLQ---------------NAIRPNTIICNH----ILRVHCREGQFRE 437
Q+ Y+ S+ Y+ M++ NA+R ++ ++R + R + E
Sbjct: 127 QRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRKKKMLNVETFCIVMRKYARAQKVDE 186
Query: 438 ALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 497
A+ + + N ++N ++ +CK + A E+ M R P YS L+
Sbjct: 187 AIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMRDR-FTPDSKTYSILLE 245
Query: 498 GFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 557
G+ KE + + A +F+EM GC P++ TY+ ++D CK +D A
Sbjct: 246 GWGKEPN------------LPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALG 293
Query: 558 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 608
+ M P Y+VL+ Y R+ E F EM+ + + D +
Sbjct: 294 IVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAV 344
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/350 (21%), Positives = 139/350 (39%), Gaps = 56/350 (16%)
Query: 259 AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIH 318
A ++ G P V + LC+ +V+ A + K ++ ++ ++
Sbjct: 157 ACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVR 216
Query: 319 GFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKP 378
G+ + + A +V +EM D+ +YN LL+A CK GDV
Sbjct: 217 GWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDV----------------- 259
Query: 379 SIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREA 438
D +++ M ++P+ + +C G A
Sbjct: 260 ----------------------DGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSA 297
Query: 439 LTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISG 498
+L+ + N Y++N II +CK A L+ M+++ P Y+++++
Sbjct: 298 YKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAY 357
Query: 499 FAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQL 558
E+N A L M R CLP+ +TY ++ +I D AT++
Sbjct: 358 HCDHC------------EVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEI 405
Query: 559 FDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 608
++ M + +P V TYTV+I HG + +K KL + +++D+GI
Sbjct: 406 WEGMSERKFYPTVATYTVMI-----HGLVRKKGKLEEACRYFEMMIDEGI 450
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 129/328 (39%), Gaps = 34/328 (10%)
Query: 89 ELFHVVVRVIKS-----LNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEV 143
E +H++V ++ S L W E + E + F S F I+ ++ A + E
Sbjct: 103 ESYHILVEILGSSKQFALLWDFLIEAR-----EYNYFEISSKVFWIVFRAYSRANLPSEA 157
Query: 144 FALLRDIV--GYCKCDDSFEQF-STLLDLPH-----------------HSVLVFNVLIKV 183
+V G C D +Q +L D H S +++L++
Sbjct: 158 CRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRG 217
Query: 184 FASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPN 243
+A A +VF + + + N LL L + G P+
Sbjct: 218 WARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPD 277
Query: 244 IHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVR 299
+++ I + GD+ A ++L ++ R P V T+ I+ LC+ VD A+ L+
Sbjct: 278 AYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLD 337
Query: 300 KLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKG 359
++ K ++ +N+++ C VN A ++L M ++ PD ++YNM+L + G
Sbjct: 338 EMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIG 397
Query: 360 DVXXXXXXXXXXXXCQIKPSIVNYTSLI 387
+ P++ YT +I
Sbjct: 398 RFDRATEIWEGMSERKFYPTVATYTVMI 425
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 72/174 (41%), Gaps = 12/174 (6%)
Query: 425 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 484
+ R + R EA E GI ++++H +C + + A E +
Sbjct: 144 VFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFG 203
Query: 485 VLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLID 544
++P YS L+ G+A+ R+ + A +F EM C+ +L Y L+D
Sbjct: 204 IVPSAKTYSILVRGWAR------------IRDASGARKVFDEMLERNCVVDLLAYNALLD 251
Query: 545 GFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
CK +D ++F EM G+ PD ++ + I Y G + K+ MK
Sbjct: 252 ALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMK 305
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/301 (20%), Positives = 106/301 (35%), Gaps = 57/301 (18%)
Query: 308 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 367
++S F V + + +EA M P V + LL++ C K V
Sbjct: 136 ISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEF 195
Query: 368 XXXXXXCQIKPSIVNYTSLILLCKNKLKG-QQLYDKS--LEVYNSMLQNAIRPNTIICNH 424
I PS Y+ L+ +G ++ D S +V++ ML+ + + N
Sbjct: 196 FGKAKGFGIVPSAKTYSILV-------RGWARIRDASGARKVFDEMLERNCVVDLLAYNA 248
Query: 425 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 484
+L C+ G + ++ G+ + YS+ IH C
Sbjct: 249 LLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAG---------------- 292
Query: 485 VLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLID 544
+++ A + M R +PN+YT+ +I
Sbjct: 293 -------------------------------DVHSAYKVLDRMKRYDLVPNVYTFNHIIK 321
Query: 545 GFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILL 604
CK + +D A L DEM +KG PD TY ++A++ H + KL M L
Sbjct: 322 TLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLP 381
Query: 605 D 605
D
Sbjct: 382 D 382
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/442 (19%), Positives = 184/442 (41%), Gaps = 60/442 (13%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
V V L+ ++A + A +VF S + E ++ + + ++
Sbjct: 114 DVFVETKLLSMYAKCGCIADARKVFDSMR----ERNLFTWSAMIGAYSRENRWREVAKLF 169
Query: 233 XXLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
+M+ G LP+ + ++ +CGD+ I + + G + + + + +C
Sbjct: 170 RLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILAVYAKC 229
Query: 289 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 348
G +D A K R++ + + +N+V+ +CQ G EA+E+++EM+ P + ++
Sbjct: 230 GELDFATKFFRRMRER----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTW 285
Query: 349 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQL-------- 399
N+L+ + + G I + +T++I L N ++ Q L
Sbjct: 286 NILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFL 345
Query: 400 ----------------------YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFRE 437
++ EV++ ++ + ++ N ++ ++ + G+ +
Sbjct: 346 AGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLED 405
Query: 438 ALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 497
A + + N + Y++N +I C+ Y A EL RM N+ P ++ ++T+IS
Sbjct: 406 ARKVFDSVK----NKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMIS 461
Query: 498 GFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLP-NLYTYTCLIDGFCKIDYIDLAT 556
G+ K E ++ LFQ M + G + N T+ +I G+ + D A
Sbjct: 462 GYIKNGDEGEAMD------------LFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEAL 509
Query: 557 QLFDEMKRKGIFPDVVTYTVLI 578
+LF +M+ P+ VT L+
Sbjct: 510 ELFRKMQFSRFMPNSVTILSLL 531
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/384 (19%), Positives = 157/384 (40%), Gaps = 72/384 (18%)
Query: 243 NIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 298
N+ T++ M+ R A++ + + G P + ++G CG V+ A K++
Sbjct: 145 NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVE-AGKVI 203
Query: 299 RKLHCKLHPLNSHCF---NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAF 355
+ KL S C N+++ + + G ++ A + M+ DV ++N +L A+
Sbjct: 204 HSVVIKLGM--SSCLRVSNSILAVYAKCGELDFATKFFRRMRER----DVIAWNSVLLAY 257
Query: 356 CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAI 415
C+ G +++++E+ M + I
Sbjct: 258 CQNGK---------------------------------------HEEAVELVKEMEKEGI 278
Query: 416 RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 475
P + N ++ + + G+ A+ L++ GI + +++ +I + AL+
Sbjct: 279 SPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALD 338
Query: 476 LMPRMLKRNVLPGVVNYSTLISGFA-------KEQSNFEMVERLFTREMNVACALFQEMS 528
+ +M V+P V + +S + + + V+ F ++ V +L S
Sbjct: 339 MFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYS 398
Query: 529 RIGCL------------PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTV 576
+ G L ++YT+ +I G+C+ Y A +LF M+ + P+++T+
Sbjct: 399 KCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNT 458
Query: 577 LIAWYHKHGRIGEKNKLFGEMKAN 600
+I+ Y K+G GE LF M+ +
Sbjct: 459 MISGYIKNGDEGEAMDLFQRMEKD 482
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 128/287 (44%), Gaps = 19/287 (6%)
Query: 311 HCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVX--XXXXXX 368
+NA++ + + G ++A E+++ M+ PD+ S+N L+NA K G +
Sbjct: 226 QVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELL 285
Query: 369 XXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRV 428
++P + Y +L+ C D +++V+ M + +P+ N ++ V
Sbjct: 286 DMVRNSGLRPDAITYNTLLSACSRDSN----LDGAVKVFEDMEAHRCQPDLWTYNAMISV 341
Query: 429 HCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPG 488
+ R G EA L + +G + +YN +++ +E + E+ +M K
Sbjct: 342 YGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKD 401
Query: 489 VVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI-GCLPNLYTYTCLIDGFC 547
+ Y+T+I + K+ ++++A L+++M + G P+ TYT LID
Sbjct: 402 EMTYNTIIHMYGKQG------------QLDLALQLYKDMKGLSGRNPDAITYTVLIDSLG 449
Query: 548 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
K + A L EM GI P + TY+ LI Y K G+ E F
Sbjct: 450 KANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTF 496
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 140/329 (42%), Gaps = 30/329 (9%)
Query: 258 LAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVI 317
LA EI + + G+ V Y + G A +LV + + + FN +I
Sbjct: 209 LAVEIFTRAEPTVGD-RVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLI 267
Query: 318 HGFCQRGAV--NEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ 375
+ + G + N A+E+L+ +++S PD +YN LL+A + ++ +
Sbjct: 268 NARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHR 327
Query: 376 IKPSIVNYTSLILL---CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 432
+P + Y ++I + C + ++L+ LE+ P+ + N +L RE
Sbjct: 328 CQPDLWTYNAMISVYGRCGLAAEAERLF-MELEL------KGFFPDAVTYNSLLYAFARE 380
Query: 433 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL---MPRMLKRNVLPGV 489
+ + + + G ++ +YN IIHM K+ +AL+L M + RN P
Sbjct: 381 RNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRN--PDA 438
Query: 490 VNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKI 549
+ Y+ LI K E A AL EM +G P L TY+ LI G+ K
Sbjct: 439 ITYTVLIDSLGKANRTVE------------AAALMSEMLDVGIKPTLQTYSALICGYAKA 486
Query: 550 DYIDLATQLFDEMKRKGIFPDVVTYTVLI 578
+ A F M R G PD + Y+V++
Sbjct: 487 GKREEAEDTFSCMLRSGTKPDNLAYSVML 515
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/429 (21%), Positives = 157/429 (36%), Gaps = 81/429 (18%)
Query: 174 VLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXX 233
V V+N ++ V++ + A ++ + + G + S N L+
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINA--------------- 269
Query: 234 XLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDV 293
L G PN LA E+L + SG P +TY T + +D
Sbjct: 270 RLKSGGLTPN--------------LAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDG 315
Query: 294 AHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLN 353
A K+ + + +NA+I + + G EA + E++ FPD +YN LL
Sbjct: 316 AVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLY 375
Query: 354 AFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQN 413
AF ++ + +K EVY M +
Sbjct: 376 AFARERNT---------------------------------------EKVKEVYQQMQKM 396
Query: 414 AIRPNTIICNHILRVHCREGQFREALTLLEDFHE-QGINLNQYSYNEIIHMICKESYPKM 472
+ + N I+ ++ ++GQ AL L +D G N + +Y +I + K +
Sbjct: 397 GFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVE 456
Query: 473 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGC 532
A LM ML + P + YS LI G+AK E E +C L R G
Sbjct: 457 AAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEA-------EDTFSCML-----RSGT 504
Query: 533 LPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNK 592
P+ Y+ ++D + + A L+ +M G P Y ++I K R + K
Sbjct: 505 KPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILGLMKENRSDDIQK 564
Query: 593 LFGEMKANC 601
+M+ C
Sbjct: 565 TIRDMEELC 573
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/341 (21%), Positives = 133/341 (39%), Gaps = 53/341 (15%)
Query: 259 AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIH 318
A ++G + +SG P + T+ + + +CG + A + + N ++H
Sbjct: 771 AESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLH 830
Query: 319 GFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKP 378
C G + E V+EE++ S ++L+AF + G++ P
Sbjct: 831 ALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLP 890
Query: 379 SIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFRE 437
+I Y +I LLCK G+++ D + V + M + + I N +L+++ +++
Sbjct: 891 TIRLYRMMIELLCK----GKRVRDAEIMV-SEMEEANFKVELAIWNSMLKMYTAIEDYKK 945
Query: 438 ALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 497
+ + + E G+ ++ +YN +I M C++ P+ LM
Sbjct: 946 TVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLM-------------------- 985
Query: 498 GFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 557
Q+M +G P L TY LI F K ++ A Q
Sbjct: 986 ---------------------------QQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQ 1018
Query: 558 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
LF+E+ KG+ D Y ++ G + KL MK
Sbjct: 1019 LFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMK 1059
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/374 (18%), Positives = 150/374 (40%), Gaps = 37/374 (9%)
Query: 235 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
L ++G P++ T+ +MS CG A I + R G +PTV + + LC G
Sbjct: 778 LRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGR 837
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
++ + +V +L ++ ++ F + G + E ++ MK++ P + Y M
Sbjct: 838 LEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRM 897
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
++ CK V K + + S++ + + Y K+++VY +
Sbjct: 898 MIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKM----YTAIEDYKKTVQVYQRI 953
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
+ + P+ N ++ ++CR+ + E L++ G++ +Y +I K+
Sbjct: 954 KETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCL 1013
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNV----------- 519
+ A +L +L + + Y T++ +++ + E+L N
Sbjct: 1014 EQAEQLFEELLSKGLKLDRSFYHTMMK-ISRDSGSDSKAEKLLQMMKNAGIEPTLATMHL 1072
Query: 520 ------ACALFQEMSRIGCLPNLYT---------YTCLIDGFCKIDYIDLATQLFDEMKR 564
+ QE ++ L NL Y+ +ID + + + + EMK+
Sbjct: 1073 LMVSYSSSGNPQEAEKV--LSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKK 1130
Query: 565 KGIFPDVVTYTVLI 578
+G+ PD +T +
Sbjct: 1131 EGLEPDHRIWTCFV 1144
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/371 (17%), Positives = 148/371 (39%), Gaps = 63/371 (16%)
Query: 259 AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCK-LHPLNSHCFNAVI 317
A+++ + SG + + + C+ G+ + AH++V + K H S + +I
Sbjct: 700 ASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDII 759
Query: 318 HGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIK 377
+ ++ +A V+ ++ S PD+ ++N L++A+ + G
Sbjct: 760 EAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCG------------------ 801
Query: 378 PSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFRE 437
C Y+++ ++N+M+++ P N +L C +G+ E
Sbjct: 802 ------------C---------YERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEE 840
Query: 438 ALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 497
++E+ + G +++ S ++ + ++ M LP + Y +I
Sbjct: 841 LYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIE 900
Query: 498 GFAK--------------EQSNFEMVERLFTREMNVACAL---------FQEMSRIGCLP 534
K E++NF++ ++ + + A+ +Q + G P
Sbjct: 901 LLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEP 960
Query: 535 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
+ TY LI +C+ + L +M+ G+ P + TY LI+ + K + + +LF
Sbjct: 961 DETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLF 1020
Query: 595 GEMKANCILLD 605
E+ + + LD
Sbjct: 1021 EELLSKGLKLD 1031
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 94/544 (17%), Positives = 195/544 (35%), Gaps = 74/544 (13%)
Query: 100 SLNWKIARE------KKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGY 153
SL + ARE K+ ++ GF + IIH + G L +D+ G
Sbjct: 372 SLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKG- 430
Query: 154 CKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCN 213
L + + + VLI + A + +VG++ +++ +
Sbjct: 431 -------------LSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYS 477
Query: 214 FLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRS 269
L+ ++ +G P+ Y++M+ + R A + +
Sbjct: 478 ALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISD 537
Query: 270 GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH--CKLHPL-------NSHCFN------ 314
G P+ Y I GL + D K +R + C ++PL CF+
Sbjct: 538 GHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGECFDLAARQL 597
Query: 315 ----------------AVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
+++ + G +EA E+LE +K + L+ CK
Sbjct: 598 KVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIVLHCKV 657
Query: 359 GDVXXXXXXXXXXXXCQIK--PSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIR 416
++ S Y +L+ C + Y ++ +V++ + +
Sbjct: 658 NNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCV----ANEHYAEASQVFSDLRLSGCE 713
Query: 417 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLN-QYSYNEIIHMICKESYPKMALE 475
+ +C ++ V+C+ G A ++ +G + Y +II K+ + A
Sbjct: 714 ASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLWQKAES 773
Query: 476 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPN 535
++ + + P + +++L+S +A+ ER A A+F M R G P
Sbjct: 774 VVGNLRQSGRTPDLKTWNSLMSAYAQ----CGCYER--------ARAIFNTMMRDGPSPT 821
Query: 536 LYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFG 595
+ + L+ C ++ + +E++ G + +++ + + G I E K++
Sbjct: 822 VESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYS 881
Query: 596 EMKA 599
MKA
Sbjct: 882 SMKA 885
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 141/328 (42%), Gaps = 22/328 (6%)
Query: 254 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 313
G+ A +L + + G P V++Y + G + A + R++ ++ +
Sbjct: 153 GNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITY 212
Query: 314 NAVIHGFCQRGAVNEALEVLEEM---KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXX 370
++ F + EA EV E + K S PD Y+M++ + K G+
Sbjct: 213 QIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSS 272
Query: 371 XXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 430
+ S V Y SL+ + Y + ++Y+ M ++ I+P+ + +++ +
Sbjct: 273 MVGKGVPQSTVTYNSLMSF-------ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYG 325
Query: 431 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 490
R + EAL++ E+ + G+ +YN ++ + A + M + + P +
Sbjct: 326 RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLW 385
Query: 491 NYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 550
+Y+T++S + S+ E E+ F R + G PN+ TY LI G+ K +
Sbjct: 386 SYTTMLSAYVN-ASDMEGAEKFFKR-----------IKVDGFEPNIVTYGTLIKGYAKAN 433
Query: 551 YIDLATQLFDEMKRKGIFPDVVTYTVLI 578
++ +++++M+ GI + T ++
Sbjct: 434 DVEKMMEVYEKMRLSGIKANQTILTTIM 461
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 135/291 (46%), Gaps = 22/291 (7%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
F +I + + G N A VL + + P+V SY L+ ++ + G
Sbjct: 142 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 201
Query: 373 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML---QNAIRPNTIICNHILRVH 429
+PS + Y ++ K ++G + + ++ EV+ ++L ++ ++P+ + + ++ ++
Sbjct: 202 SSGPEPSAITYQ---IILKTFVEGDK-FKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 257
Query: 430 CREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGV 489
+ G + +A + +G+ + +YN + M + SY +++ ++ +M + ++ P V
Sbjct: 258 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSL--MSFETSYKEVS-KIYDQMQRSDIQPDV 314
Query: 490 VNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKI 549
V+Y+ LI + + R A ++F+EM G P Y L+D F
Sbjct: 315 VSYALLIKAYGR------------ARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAIS 362
Query: 550 DYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 600
++ A +F M+R IFPD+ +YT +++ Y + K F +K +
Sbjct: 363 GMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVD 413
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 146/369 (39%), Gaps = 28/369 (7%)
Query: 235 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
L + G PN+ +YT +M G A I ++ SG P+ +TY ++ E
Sbjct: 165 LSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDK 224
Query: 291 VDVAHKLVRKL-HCKLHPL--NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 347
A ++ L K PL + ++ +I+ + + G +A +V M +
Sbjct: 225 FKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVT 284
Query: 348 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQ-QLYDKSLEV 406
YN L++ +V I+P +V+Y LI K G+ + +++L V
Sbjct: 285 YNSLMSFETSYKEVSKIYDQMQR---SDIQPDVVSYALLI-----KAYGRARREEEALSV 336
Query: 407 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 466
+ ML +RP N +L G +A T+ + I + +SY ++
Sbjct: 337 FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVN 396
Query: 467 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQE 526
S + A + R+ P +V Y TLI G+AK +M+E ++++
Sbjct: 397 ASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMME------------VYEK 444
Query: 527 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 586
M G N T ++D + A + EM+ G+ PD VL++
Sbjct: 445 MRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDE 504
Query: 587 IGEKNKLFG 595
+ E +L G
Sbjct: 505 LEEAKELTG 513
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 128/312 (41%), Gaps = 10/312 (3%)
Query: 170 PHHSVLVFNVLIKVFASNSMLEHAHQVF---VSAKNVGLELHIRSCNFLLKCLXXXXXXX 226
P S + + +++K F + A +VF + K L+ + + ++
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 227 XXXXXXXXLMETGPLPNIHTYTIMMSC-GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGL 285
++ G + TY +MS + ++I ++ RS P VV+Y I+
Sbjct: 265 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAY 324
Query: 286 CECGYVDVAHKLVRK-LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 344
+ A + + L + P + +N ++ F G V +A V + M+ R FPD
Sbjct: 325 GRARREEEALSVFEEMLDAGVRPTH-KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPD 383
Query: 345 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSL 404
++SY +L+A+ D+ +P+IV Y +LI K K + +K +
Sbjct: 384 LWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLI---KGYAKANDV-EKMM 439
Query: 405 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
EVY M + I+ N I I+ R F AL ++ G+ +Q + N ++ +
Sbjct: 440 EVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLA 499
Query: 465 CKESYPKMALEL 476
+ + A EL
Sbjct: 500 STQDELEEAKEL 511
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/328 (20%), Positives = 141/328 (42%), Gaps = 22/328 (6%)
Query: 254 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 313
G+ A +L + + G P V++Y + G + A + R++ ++ +
Sbjct: 160 GNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITY 219
Query: 314 NAVIHGFCQRGAVNEALEVLEEM---KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXX 370
++ F + EA EV E + K S PD Y+M++ + K G+
Sbjct: 220 QIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSS 279
Query: 371 XXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 430
+ S V Y SL+ + Y + ++Y+ M ++ I+P+ + +++ +
Sbjct: 280 MVGKGVPQSTVTYNSLMSF-------ETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAYG 332
Query: 431 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 490
R + EAL++ E+ + G+ +YN ++ + A + M + + P +
Sbjct: 333 RARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLW 392
Query: 491 NYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 550
+Y+T++S + S+ E E+ F R + G PN+ TY LI G+ K +
Sbjct: 393 SYTTMLSAYVN-ASDMEGAEKFFKR-----------IKVDGFEPNIVTYGTLIKGYAKAN 440
Query: 551 YIDLATQLFDEMKRKGIFPDVVTYTVLI 578
++ +++++M+ GI + T ++
Sbjct: 441 DVEKMMEVYEKMRLSGIKANQTILTTIM 468
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 135/291 (46%), Gaps = 22/291 (7%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
F +I + + G N A VL + + P+V SY L+ ++ + G
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 208
Query: 373 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML---QNAIRPNTIICNHILRVH 429
+PS + Y ++ K ++G + + ++ EV+ ++L ++ ++P+ + + ++ ++
Sbjct: 209 SSGPEPSAITYQ---IILKTFVEGDK-FKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMY 264
Query: 430 CREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGV 489
+ G + +A + +G+ + +YN + M + SY +++ ++ +M + ++ P V
Sbjct: 265 KKAGNYEKARKVFSSMVGKGVPQSTVTYNSL--MSFETSYKEVS-KIYDQMQRSDIQPDV 321
Query: 490 VNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKI 549
V+Y+ LI + + R A ++F+EM G P Y L+D F
Sbjct: 322 VSYALLIKAYGR------------ARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAIS 369
Query: 550 DYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 600
++ A +F M+R IFPD+ +YT +++ Y + K F +K +
Sbjct: 370 GMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVD 420
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/369 (22%), Positives = 146/369 (39%), Gaps = 28/369 (7%)
Query: 235 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
L + G PN+ +YT +M G A I ++ SG P+ +TY ++ E
Sbjct: 172 LSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDK 231
Query: 291 VDVAHKLVRKL-HCKLHPL--NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 347
A ++ L K PL + ++ +I+ + + G +A +V M +
Sbjct: 232 FKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVT 291
Query: 348 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQ-QLYDKSLEV 406
YN L++ +V I+P +V+Y LI K G+ + +++L V
Sbjct: 292 YNSLMSFETSYKEVSKIYDQMQR---SDIQPDVVSYALLI-----KAYGRARREEEALSV 343
Query: 407 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 466
+ ML +RP N +L G +A T+ + I + +SY ++
Sbjct: 344 FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVN 403
Query: 467 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQE 526
S + A + R+ P +V Y TLI G+AK +M+E ++++
Sbjct: 404 ASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMME------------VYEK 451
Query: 527 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 586
M G N T ++D + A + EM+ G+ PD VL++
Sbjct: 452 MRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDE 511
Query: 587 IGEKNKLFG 595
+ E +L G
Sbjct: 512 LEEAKELTG 520
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 128/312 (41%), Gaps = 10/312 (3%)
Query: 170 PHHSVLVFNVLIKVFASNSMLEHAHQVF---VSAKNVGLELHIRSCNFLLKCLXXXXXXX 226
P S + + +++K F + A +VF + K L+ + + ++
Sbjct: 212 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 271
Query: 227 XXXXXXXXLMETGPLPNIHTYTIMMSC-GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGL 285
++ G + TY +MS + ++I ++ RS P VV+Y I+
Sbjct: 272 KARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQRSDIQPDVVSYALLIKAY 331
Query: 286 CECGYVDVAHKLVRK-LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 344
+ A + + L + P + +N ++ F G V +A V + M+ R FPD
Sbjct: 332 GRARREEEALSVFEEMLDAGVRPTH-KAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPD 390
Query: 345 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSL 404
++SY +L+A+ D+ +P+IV Y +LI K K + +K +
Sbjct: 391 LWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLI---KGYAKANDV-EKMM 446
Query: 405 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
EVY M + I+ N I I+ R F AL ++ G+ +Q + N ++ +
Sbjct: 447 EVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLA 506
Query: 465 CKESYPKMALEL 476
+ + A EL
Sbjct: 507 STQDELEEAKEL 518
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/303 (24%), Positives = 132/303 (43%), Gaps = 27/303 (8%)
Query: 308 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 367
+ S FN ++ + V +A +V ++MK R PD+ SY +LL + ++ ++
Sbjct: 195 MESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEV 254
Query: 368 XXXXXXCQIKPSIVNYTSLILL-CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHIL 426
+P +V Y +I CK K Y++++ +N M Q +P+ I ++
Sbjct: 255 NREMKDEGFEPDVVAYGIIINAHCKAKK-----YEEAIRFFNEMEQRNCKPSPHIFCSLI 309
Query: 427 RVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL 486
E + +AL E G L +YN ++ C + A + + M + V
Sbjct: 310 NGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVG 369
Query: 487 PGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGF 546
P Y ++ + Q + E E ++Q MS C P + TY ++ F
Sbjct: 370 PNARTYDIILHHLIRMQRSKEAYE------------VYQTMS---CEPTVSTYEIMVRMF 414
Query: 547 CKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 606
C + +D+A +++DEMK KG+ P + ++ LI ++ E + F EM LD
Sbjct: 415 CNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEM------LDV 468
Query: 607 GIK 609
GI+
Sbjct: 469 GIR 471
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/464 (20%), Positives = 172/464 (37%), Gaps = 91/464 (19%)
Query: 114 WVETH-GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHH 172
W E GF H+ + + +I + +++L+ D+ + LL
Sbjct: 117 WAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDM-----------KAKKLL----- 160
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
S F ++ + +A ++ A F + G ++ N +L L
Sbjct: 161 SKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVF 220
Query: 233 XXLMETGPLPNIHTYTIMMSCGDIRL----AAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
+ + P+I +YTI++ L E+ ++ G P VV YG I C+
Sbjct: 221 DKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKA 280
Query: 289 GYVDVAHKLVRKL---HCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFP-D 344
+ A + ++ +CK P H F ++I+G +N+ALE E KSS FP +
Sbjct: 281 KKYEEAIRFFNEMEQRNCKPSP---HIFCSLINGLGSEKKLNDALEFFERSKSS-GFPLE 336
Query: 345 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSL 404
+YN L+ A+C Q + +
Sbjct: 337 APTYNALVGAYC---------------------------------------WSQRMEDAY 357
Query: 405 EVYNSMLQNAIRPNT----IICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 460
+ + M + PN II +H++R+ + +EA E + +Y +
Sbjct: 358 KTVDEMRLKGVGPNARTYDIILHHLIRMQ----RSKEA---YEVYQTMSCEPTVSTYEIM 410
Query: 461 IHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVA 520
+ M C + MA+++ M + VLPG+ +S+LI+ E +++ A
Sbjct: 411 VRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHEN------------KLDEA 458
Query: 521 CALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 564
C F EM +G P + ++ L D T L +M R
Sbjct: 459 CEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDR 502
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 119/279 (42%), Gaps = 27/279 (9%)
Query: 326 VNEALEVLEE-----MKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 380
V E +++ E M +S DVY+Y +L+ + + P+
Sbjct: 158 VKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNA 217
Query: 381 VNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREAL 439
V Y +L+ LCKN G+ S++ PN + N ++ +C E + +++
Sbjct: 218 VVYNTLLHALCKNGKVGRA---------RSLMSEMKEPNDVTFNILISAYCNEQKLIQSM 268
Query: 440 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 499
LLE G + + +++ ++C E ALE++ R+ + VV +TL+ G+
Sbjct: 269 VLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGY 328
Query: 500 AKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLF 559
+M VA F EM R G LPN+ TY LI G+C + +D A F
Sbjct: 329 CA------------LGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTF 376
Query: 560 DEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
++MK I + T+ LI GR + K+ M+
Sbjct: 377 NDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQ 415
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/493 (21%), Positives = 186/493 (37%), Gaps = 47/493 (9%)
Query: 114 WVETH-GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHH 172
W T GF HS + +R + H + V+ LL ++ + LP
Sbjct: 65 WASTFPGFIHSRSTYRALFHKLCVFRRFDTVYQLL-------------DEMPDSIGLPPD 111
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
+F +I+ F +++ V G++ ++ N +L L
Sbjct: 112 DA-IFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFT 170
Query: 233 XXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
+M +G +++TY I+M I ++L + SG P V Y T + LC+
Sbjct: 171 RKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKN 230
Query: 289 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 348
G V A R L ++ N FN +I +C + +++ +LE+ S PDV +
Sbjct: 231 GKVGRA----RSLMSEMKEPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTV 286
Query: 349 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLEV 406
++ C +G V K +V +L+ K++ Q +
Sbjct: 287 TKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRF------ 340
Query: 407 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 466
+ M + PN N ++ +C G AL D I N ++N +I +
Sbjct: 341 FIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSI 400
Query: 467 ESYPKMALELMPRMLKRNVLPG--VVNYSTLISGFAKEQSNFEMVERLFTREMNVACALF 524
L+++ M + + G + Y+ +I GF KE + +E L E LF
Sbjct: 401 GGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLLKME-----KLF 455
Query: 525 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 584
P + + C+ +D +D+M +G P ++ LI Y +H
Sbjct: 456 ---------PRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQH 506
Query: 585 GRIGEKNKLFGEM 597
G+I E +L +M
Sbjct: 507 GKIEESLELINDM 519
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 140/330 (42%), Gaps = 12/330 (3%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
V+ +++V + + A +V ++ G ++ + +CN L+K
Sbjct: 282 DVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFF 341
Query: 233 XXLMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
+ G LPN+ TY ++++ G + A + + T+ T IRGL
Sbjct: 342 IEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIG 401
Query: 289 GYVDVAHKLVRKLHCK--LHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 346
G D K++ + +H +N VI+GF + +ALE L +K + FP
Sbjct: 402 GRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFL--LKMEKLFPRAV 459
Query: 347 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEV 406
+ L + C+KG + PSI+ LI ++ ++SLE+
Sbjct: 460 DRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLI----HRYSQHGKIEESLEL 515
Query: 407 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 466
N M+ P + N ++ C++ + + +ED E+G + SYN ++ +C
Sbjct: 516 INDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTESYNPLLEELCV 575
Query: 467 ESYPKMALELMPRMLKRNVLPGVVNYSTLI 496
+ + A L RM++++++P +S+L+
Sbjct: 576 KGDIQKAWLLFSRMVEKSIVPDPSMWSSLM 605
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 132/330 (40%), Gaps = 27/330 (8%)
Query: 277 TYGTYIRGLCECGYVDVAHKLVRKLHCKLH-PLNSHCFNAVIHGFCQRGAVNEALEVLEE 335
TY LC D ++L+ ++ + P + F +I GF + + + V++
Sbjct: 78 TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDL 137
Query: 336 MKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLK 395
+ P + +N +L+ K+ I + Y L +K
Sbjct: 138 VSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGIL-------MK 190
Query: 396 GQQLYDK---SLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 452
G L ++ ++ M + + PN ++ N +L C+ G+ A +L+ + E
Sbjct: 191 GLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEP---- 246
Query: 453 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 512
N ++N +I C E ++ L+ + +P VV + ++ E E +E
Sbjct: 247 NDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALE-- 304
Query: 513 FTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
+ + + G ++ L+ G+C + + +A + F EM+RKG P+V
Sbjct: 305 ----------VLERVESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVE 354
Query: 573 TYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
TY +LIA Y G + F +MK + I
Sbjct: 355 TYNLLIAGYCDVGMLDSALDTFNDMKTDAI 384
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%)
Query: 270 GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEA 329
GG P+++ I + G ++ + +L+ + + + S FNAVI GFC++ V
Sbjct: 488 GGVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNG 547
Query: 330 LEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL 389
++ +E+M PD SYN LL C KGD+ I P ++SL+
Sbjct: 548 IKFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFC 607
Query: 390 CKNK 393
K
Sbjct: 608 LSQK 611
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 183/435 (42%), Gaps = 27/435 (6%)
Query: 166 LLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXX 225
L+ P S + N+ + LE A + + +G+ + + N L+K
Sbjct: 5 LMKFPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGI 64
Query: 226 XXXXXXXXXLMETGPLPNIHTYTIMMSCGDIRL----AAEILGKIYRSGGNPTVVTYGTY 281
+ E G P++ TY ++S L ++ ++ SG +P + +Y T
Sbjct: 65 DEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTL 124
Query: 282 IRGLCECGYVDVAHKLVRK-LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSR 340
+ + G A K++ + +H +N ++ C+ G + A+E+ + +KS R
Sbjct: 125 MSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKS-R 183
Query: 341 TFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLY 400
P++ +YN+L+N CK V P+ V YT+++ K K +++
Sbjct: 184 VKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTML---KMYFKTKRI- 239
Query: 401 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQ-YSYNE 459
+K L+++ M + + ++ + G+ EA + + G SYN
Sbjct: 240 EKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNT 299
Query: 460 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNV 519
++++ K+ +L+ + + + P ++ +++G + E ++
Sbjct: 300 LLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLN-------IGNTGGAEKHL 352
Query: 520 ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 579
AC + +G P++ T CLIDG CK ++D A +LF M+ + D TYT ++
Sbjct: 353 AC-----IGEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVR----DEFTYTSVVH 403
Query: 580 WYHKHGRIGEKNKLF 594
K GR+ +KL
Sbjct: 404 NLCKDGRLVCASKLL 418
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/369 (22%), Positives = 165/369 (44%), Gaps = 29/369 (7%)
Query: 239 GPLPNIHTYTIMMSCGDIRL-----AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDV 293
G LP++ TY ++ G R A + ++ +G P V TY + I G + ++
Sbjct: 43 GVLPDVITYNTLIK-GYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNR 101
Query: 294 AHKLVRK-LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVL-EEMKSSRTFPDVYSYNML 351
+L + LH L P + +N ++ + + G EA ++L E++ + P + +YN+L
Sbjct: 102 VLQLFDEMLHSGLSP-DMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNIL 160
Query: 352 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSM 410
L+A CK G ++KP ++ Y LI LCK++ G + + +
Sbjct: 161 LDALCKSGHTDNAIELFKHLKS-RVKPELMTYNILINGLCKSRRVGSVDW-----MMREL 214
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
++ PN + +L+++ + + + L L ++G + ++ ++ + K
Sbjct: 215 KKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFANCAVVSALIKTGRA 274
Query: 471 KMALELMPRMLKRNVLP-GVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSR 529
+ A E M +++ +V+Y+TL++ + K+ N + V+ L +E+
Sbjct: 275 EEAYECMHELVRSGTRSQDIVSYNTLLNLYFKD-GNLDAVD-----------DLLEEIEM 322
Query: 530 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 589
G P+ YT+T +++G I A + + G+ P VVT LI K G +
Sbjct: 323 KGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAGHVDR 382
Query: 590 KNKLFGEMK 598
+LF M+
Sbjct: 383 AMRLFASME 391
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/324 (22%), Positives = 129/324 (39%), Gaps = 65/324 (20%)
Query: 297 LVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 356
+VR L K +++ N ++ C+ + A +L + PDV +YN L+ +
Sbjct: 1 MVRGL-MKFPGISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYT 59
Query: 357 KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIR 416
+ + I+P + Y SLI L + ++ L++++ ML + +
Sbjct: 60 RFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNL----MLNRVLQLFDEMLHSGLS 115
Query: 417 PNTIICNHILRVHCREGQFREALTLL-EDFHEQGINLNQYSYNEIIHMICKESYPKMALE 475
P+ N ++ + + G+ EA +L ED H G+
Sbjct: 116 PDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGL------------------------- 150
Query: 476 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEM-SRIGCLP 534
+PG+ Y+ L+ K +E LF+ + SR+ P
Sbjct: 151 ----------VPGIDTYNILLDALCKSGHTDNAIE------------LFKHLKSRVK--P 186
Query: 535 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
L TY LI+G CK + + E+K+ G P+ VTYT ++ Y K RI + +LF
Sbjct: 187 ELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLF 246
Query: 595 GEMK---------ANCILLDDGIK 609
+MK ANC ++ IK
Sbjct: 247 LKMKKEGYTFDGFANCAVVSALIK 270
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 137/370 (37%), Gaps = 64/370 (17%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKC-LXXXXXXXXXXXX 231
V +N LI A N ML Q+F + GL + S N L+ C
Sbjct: 82 DVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKIL 141
Query: 232 XXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE 287
+ G +P I TY I++ G A E+ K +S P ++TY I GLC+
Sbjct: 142 HEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELF-KHLKSRVKPELMTYNILINGLCK 200
Query: 288 CGYVDVAHKLVRKLHCKLHPLNSHCFN--------------------------------- 314
V ++R+L + N+ +
Sbjct: 201 SRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFDGFA 260
Query: 315 --AVIHGFCQRGAVNEALEVLEEM-KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 371
AV+ + G EA E + E+ +S D+ SYN LLN + K G++
Sbjct: 261 NCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEEI 320
Query: 372 XXCQIKPSIVNYTSLI--LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVH 429
+KP +T ++ LL G + K L M ++P+ + CN ++
Sbjct: 321 EMKGLKPDDYTHTIIVNGLLNIGNTGGAE---KHLACIGEM---GMQPSVVTCNCLIDGL 374
Query: 430 CREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM----------PR 479
C+ G A+ L + ++++Y ++H +CK+ A +L+ P
Sbjct: 375 CKAGHVDRAMRLFASMEVR----DEFTYTSVVHNLCKDGRLVCASKLLLSCYNKGMKIPS 430
Query: 480 MLKRNVLPGV 489
+R VL G+
Sbjct: 431 SARRAVLSGI 440
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 104/511 (20%), Positives = 195/511 (38%), Gaps = 60/511 (11%)
Query: 94 VVRVIKSLNWKIAREKKFGSWVETH-GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVG 152
+ RV+ +R F WV+ G +V + +++H + L +++
Sbjct: 82 ISRVLLRFQSDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIE 141
Query: 153 YCKCDDSFEQFSTLL---DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHI 209
+ + F L+ D + +VF++L+K + ++E +VF + G + +
Sbjct: 142 LTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSV 201
Query: 210 RSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS--CGD--IRLAAEILGK 265
+CN LL L + G PN +T+ I+ + C D R + L K
Sbjct: 202 VTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEK 261
Query: 266 IYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGA 325
+ G P +VTY T + C G + A L + ++ + + + ++I G C+ G
Sbjct: 262 MEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGR 321
Query: 326 VNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTS 385
V EA + M PD SYN L+ A+CK+G
Sbjct: 322 VREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEG-------------------------- 355
Query: 386 LILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 445
+ +S ++ + ML N++ P+ C I+ REG+ A+ + +
Sbjct: 356 -------------MMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVEL 402
Query: 446 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN 505
+++ + +I +C+E P A L+ R+++ AK ++
Sbjct: 403 RRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEE------------GHEAKPETY 450
Query: 506 FEMVERLFTRE-MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 564
++E L + + A L ++ + + TY LI C+I A L EM
Sbjct: 451 NNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFD 510
Query: 565 KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFG 595
+ PD L+ Y K + +L
Sbjct: 511 SEVKPDSFICGALVYGYCKELDFDKAERLLS 541
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 104/465 (22%), Positives = 186/465 (40%), Gaps = 45/465 (9%)
Query: 115 VETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCK---CDDSFEQFSTLLDLPH 171
+E V+ FR+++ VF +L + GY K ++ F F +LD
Sbjct: 140 IELTSKKEEVDVFRVLVSATDECNWDPVVFDML--VKGYLKLGLVEEGFRVFREVLDSGF 197
Query: 172 H-SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXX 230
SV+ N L+ ++E QV+ VG+ + + N L
Sbjct: 198 SVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDD 257
Query: 231 XXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLC 286
+ E G P++ TY ++S G ++ A + +YR P +VTY + I+GLC
Sbjct: 258 FLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLC 317
Query: 287 ECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 346
+ G V AH+ ++ + + +N +I+ +C+ G + ++ ++L EM + PD +
Sbjct: 318 KDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRF 377
Query: 347 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIK-PSIVNYTSLILLCK--NKLKGQQLYDKS 403
+ +++ F ++G + ++ P V ++ LC+ + L D+
Sbjct: 378 TCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRI 437
Query: 404 LEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHM 463
+E + +P T N+++ R EAL L Q L+ +Y +I
Sbjct: 438 IEEEG----HEAKPETY--NNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGC 491
Query: 464 ICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL---FTREMNV- 519
+C+ + A LM M V P L+ G+ KE +F+ ERL F E +
Sbjct: 492 LCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKEL-DFDKAERLLSLFAMEFRIF 550
Query: 520 ---------------------ACALFQEMSRIGCLPNLYTYTCLI 543
A L + M R+G +PN T LI
Sbjct: 551 DPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLI 595
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 125/294 (42%), Gaps = 19/294 (6%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY-NMLLNAFCKKGDVXXXXXXXXXX 371
F V +R V +L + SS+ FP + L+ KK +V
Sbjct: 100 FKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSAT 159
Query: 372 XXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 431
C P + + +L K LK L ++ V+ +L + + + CNH+L +
Sbjct: 160 DECNWDPVVFD-----MLVKGYLK-LGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLK 213
Query: 432 EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 491
+ + GI+ N Y++N + ++ C +S + + + +M + P +V
Sbjct: 214 LDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVT 273
Query: 492 YSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 551
Y+TL+S + + + A L++ M R +P+L TYT LI G CK
Sbjct: 274 YNTLVSSYCRRG------------RLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGR 321
Query: 552 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
+ A Q F M +GI PD ++Y LI Y K G + + KL EM N ++ D
Sbjct: 322 VREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPD 375
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 131/317 (41%), Gaps = 64/317 (20%)
Query: 305 LHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXX 364
+HP N++ FN + + FC E + LE+M+ PD+ +YN L++++C++G
Sbjct: 232 IHP-NTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRG----- 285
Query: 365 XXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNH 424
+LK ++ +Y M + + P+ +
Sbjct: 286 ----------------------------RLK------EAFYLYKIMYRRRVVPDLVTYTS 311
Query: 425 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 484
+++ C++G+ REA ++GI + SYN +I+ CKE + + +L+ ML +
Sbjct: 312 LIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNS 371
Query: 485 VLPGVVNYSTLISGFAKEQ---SNFEMVERLFTREMNVA--------CALFQE------- 526
V+P ++ GF +E S V L ++++ +L QE
Sbjct: 372 VVPDRFTCKVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAK 431
Query: 527 --MSRI----GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAW 580
+ RI G TY LI+ + D I+ A L ++K + D TY LI
Sbjct: 432 HLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGC 491
Query: 581 YHKHGRIGEKNKLFGEM 597
+ GR E L EM
Sbjct: 492 LCRIGRNREAESLMAEM 508
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 129/318 (40%), Gaps = 53/318 (16%)
Query: 253 CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHC 312
CG++ E L I G P TY I G + G D A KL ++ K
Sbjct: 131 CGELEKMKERLSSI-DEFGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVT 189
Query: 313 FNAVIHGFCQRGAVNEALEVLEEM-KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 371
F +IHG C+ V EAL++ +M K P V+ Y L+ A C+ G++
Sbjct: 190 FGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEA 249
Query: 372 XXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 431
+IK Y++LI S L A R N
Sbjct: 250 YEGKIKVDAAIYSTLI---------------------SSLIKAGRSN------------- 275
Query: 432 EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 491
E +LE+ E+G + +YN +I+ C E+ + A ++ M+++ + P V++
Sbjct: 276 -----EVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVIS 330
Query: 492 YSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 551
Y+ ++ F + ++ A LF++M R GC P+ +Y + DG C+
Sbjct: 331 YNMILGVFFR------------IKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQ 378
Query: 552 IDLATQLFDEMKRKGIFP 569
+ A + DEM KG P
Sbjct: 379 FEEAAVILDEMLFKGYKP 396
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 102/222 (45%), Gaps = 17/222 (7%)
Query: 377 KPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFR 436
KP Y LI C +D +L++++ M++ ++P + ++ C++ + +
Sbjct: 149 KPDACTYNILIHGCSQ----SGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVK 204
Query: 437 EALTLLEDFHE-QGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 495
EAL + D + G+ + Y +I +C+ A +L + + YSTL
Sbjct: 205 EALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTL 264
Query: 496 ISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLA 555
IS K + N + +EMS GC P+ TY LI+GFC + + A
Sbjct: 265 ISSLIKAGRS------------NEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESA 312
Query: 556 TQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
++ DEM KG+ PDV++Y +++ + + + E LF +M
Sbjct: 313 NRVLDEMVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDM 354
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 108/241 (44%), Gaps = 13/241 (5%)
Query: 265 KIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRG 324
K+Y G PTV Y + I+ LC+ G + A KL + + +++ ++ +I + G
Sbjct: 215 KVY--GVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAG 272
Query: 325 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYT 384
NE +LEEM PD +YN+L+N FC + D +KP +++Y
Sbjct: 273 RSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISY- 331
Query: 385 SLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 444
++IL ++K ++++ ++ M + P+T+ + C QF EA +L++
Sbjct: 332 NMILGVFFRIKK---WEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDE 388
Query: 445 FHEQGINLNQYSYNEIIHMICKESYPKMALELMPRM---LKRNVLPGVVNYSTLISGFAK 501
+G + + +C+ LE++ ++ L R + +S +I K
Sbjct: 389 MLFKGYKPRRDRLEGFLQKLCESG----KLEILSKVISSLHRGIAGDADVWSVMIPTMCK 444
Query: 502 E 502
E
Sbjct: 445 E 445
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 104/252 (41%), Gaps = 13/252 (5%)
Query: 239 GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
G P +H Y ++ G++ A ++ + Y Y T I L + G +
Sbjct: 218 GVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEV 277
Query: 295 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 354
++ ++ K ++ +N +I+GFC A VL+EM PDV SYNM+L
Sbjct: 278 SMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGV 337
Query: 355 F--CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQ 412
F KK + C P ++Y ++ +G Q ++++ + + ML
Sbjct: 338 FFRIKKWEEATYLFEDMPRRGCS--PDTLSYR---IVFDGLCEGLQ-FEEAAVILDEMLF 391
Query: 413 NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 472
+P L+ C G+ ++ H +GI + ++ +I +CKE
Sbjct: 392 KGYKPRRDRLEGFLQKLCESGKLEILSKVISSLH-RGIAGDADVWSVMIPTMCKEPVISD 450
Query: 473 ALELMPRMLKRN 484
+++L+ +K +
Sbjct: 451 SIDLLLNTVKED 462
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 168/403 (41%), Gaps = 67/403 (16%)
Query: 254 GDIRLAAE-ILGKIYRSGGNPTVVTYGTYIRGLC-ECGYVDVAHKLVRKLHCKLHPLNSH 311
G+I + E +LG+I R N V LC + Y+ ++ + ++ PL
Sbjct: 455 GNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPL-PF 513
Query: 312 CFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXX 371
+N+VI Q + + ++ ++ PDV +Y +++N CKK D
Sbjct: 514 SYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAM 573
Query: 372 XXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 431
++P++ Y+S+I L Q ++ E + ML++ I+P+ I ++ + R
Sbjct: 574 EELGLRPTVAIYSSII----GSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYAR 629
Query: 432 EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 491
G+ EA L+E+ + + + ++Y +I K + + + +ML+ + P VV
Sbjct: 630 NGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVL 689
Query: 492 YS-----------------------------------TLISGFAK------------EQS 504
Y+ TL+SG + E
Sbjct: 690 YTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPG 749
Query: 505 NFEMVERLFTRE--MNVACALFQ------EMSRIG-----CLPNLYTYTCLIDGFCKIDY 551
++++RL + +++ +L M IG +PNLY + +I G+C
Sbjct: 750 KEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGR 809
Query: 552 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
+D A + M+++GI P++VTYT+L+ + + G I LF
Sbjct: 810 LDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLF 852
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 156/402 (38%), Gaps = 51/402 (12%)
Query: 251 MSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL-VRKLHCKLHPLN 309
M G + + ++ + G V TY I C+ G VD A +L V + N
Sbjct: 318 MKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRN 377
Query: 310 SHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAF--CKKGDVXXXXXX 367
HC+ +I GF ++G +++A+++L M + PD +Y +LL C +
Sbjct: 378 VHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQ 437
Query: 368 XXXXXXCQIKPSIVNYTSLILLCKNKLKG-----------------------QQLYDKSL 404
C I P +++ I + L G Q+ Y +L
Sbjct: 438 SILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAAL 497
Query: 405 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
M+ P N +++ +E + +L+ E + +Y +++ +
Sbjct: 498 SRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNEL 557
Query: 465 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTR--------- 515
CK++ A ++ M + + P V YS++I K+ E E F +
Sbjct: 558 CKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVE-AEETFAKMLESGIQPD 616
Query: 516 ---------------EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 560
++ A L +E+ + P+ +TYT LI GF K+ ++ Q D
Sbjct: 617 EIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLD 676
Query: 561 EMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
+M G+ P+VV YT LI + K G LFG M N I
Sbjct: 677 KMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDI 718
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 152/398 (38%), Gaps = 52/398 (13%)
Query: 237 ETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 292
E G P + Y+ ++ G + A E K+ SG P + Y I G +D
Sbjct: 575 ELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRID 634
Query: 293 VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLL 352
A++LV ++ +S + +I GF + G + + + L++M P+V Y L+
Sbjct: 635 EANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALI 694
Query: 353 NAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSL-----------------ILLCKNKLK 395
F KKGD IK + Y +L + K KL
Sbjct: 695 GHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKLL 754
Query: 396 GQQLYDKSLEVYNSMLQN----------------AIRPNTIICNHILRVHCREGQFREAL 439
+ + K L S L N +I PN + N I+ +C G+ EA
Sbjct: 755 QRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAY 814
Query: 440 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 499
LE ++GI N +Y ++ + + A++L N P V YSTL+ G
Sbjct: 815 NHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE---GTNCEPDQVMYSTLLKGL 871
Query: 500 AKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLF 559
F R ++ A AL EM + G PN +Y L+ C A ++
Sbjct: 872 CD-----------FKRPLD-ALALMLEMQKSGINPNKDSYEKLLQCLCYSRLTMEAVKVV 919
Query: 560 DEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
+M I+P + +T LI + ++ E LF M
Sbjct: 920 KDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIM 957
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/356 (19%), Positives = 159/356 (44%), Gaps = 36/356 (10%)
Query: 276 VTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEE 335
V Y ++ C+ + +A +L ++ + L+ FN +IHGF + G +++ + +
Sbjct: 273 VMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQ 332
Query: 336 MKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ-IKPSIVNYTSLILLCKNKL 394
M +V++Y++++ ++CK+G+V + I ++ YT+LI
Sbjct: 333 MIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIF----GF 388
Query: 395 KGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQ 454
+ DK++++ ML N I P+ I +L++ + + + A+ +L+ + G +N
Sbjct: 389 YKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINP 448
Query: 455 YSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFT 514
+++ ++ K L+ + +++ V + + + +++ + R+
Sbjct: 449 PVIDDLGNIEVKVE------SLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRI-E 501
Query: 515 REMNVACA------------LFQE------------MSRIGCLPNLYTYTCLIDGFCKID 550
+ +N+ C LFQE + + +P++ TY +++ CK +
Sbjct: 502 KMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKN 561
Query: 551 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 606
D A + D M+ G+ P V Y+ +I K GR+ E + F +M + I D+
Sbjct: 562 DRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDE 617
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/416 (19%), Positives = 166/416 (39%), Gaps = 86/416 (20%)
Query: 105 IAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFS 164
+ E+ F +E+ + Y I+I+T+A G E L+ ++V + SF
Sbjct: 599 VEAEETFAKMLESGIQPDEIAYM-IMINTYARNGRIDEANELVEEVVKHFLRPSSF---- 653
Query: 165 TLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXX 224
+ VLI F M+E + C +L K
Sbjct: 654 -----------TYTVLISGFVKMGMME------------------KGCQYLDK------- 677
Query: 225 XXXXXXXXXXLMETGPLPNIHTYTIM----MSCGDIRLAAEILGKIYRSGGNPTVVTYGT 280
++E G PN+ YT + + GD + + + G + + + Y T
Sbjct: 678 ----------MLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYIT 727
Query: 281 YIRGL-------------CECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVN 327
+ GL E G + +L+R PL S + G+ +
Sbjct: 728 LLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRT-----KPLVS-----IPSSLGNYGSKS 777
Query: 328 EALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI 387
A+EV+ ++K S P++Y +N ++ +C G + I P++V YT
Sbjct: 778 FAMEVIGKVKKS-IIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYT--- 833
Query: 388 LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHE 447
+L K+ ++ + + +++++ P+ ++ + +L+ C + +AL L+ + +
Sbjct: 834 ILMKSHIEAGDI-ESAIDLFEG---TNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQK 889
Query: 448 QGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ 503
GIN N+ SY +++ +C A++++ M ++ P +N++ LI +E+
Sbjct: 890 SGINPNKDSYEKLLQCLCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEK 945
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/334 (23%), Positives = 135/334 (40%), Gaps = 54/334 (16%)
Query: 258 LAAEILGKIYRSGGNPTVVTYGTY-IRGLCECGYVD-VAHKLVRKLHCKLHPLNSHCFNA 315
L ++L K +RS G P TY I+ E + V + L P H
Sbjct: 102 LIDDVLAK-HRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRI 160
Query: 316 VIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ 375
+ RG + +A E+ + + P+ SYN+L+ AFC D+
Sbjct: 161 LDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSI------------ 208
Query: 376 IKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 435
+ +++ ML+ + P+ +++ CR+GQ
Sbjct: 209 ---------------------------AYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 436 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 495
A+ LL+D +G ++ SY +++ +C+++ + A +L+ RM + P +V+Y+T+
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTM 301
Query: 496 ISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLA 555
I GF +E R M+ A + +M GC PN +Y LI G C D
Sbjct: 302 ILGFCRED-----------RAMD-ARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEG 349
Query: 556 TQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 589
+ +EM KG P L+ + G++ E
Sbjct: 350 KKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEE 383
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 13/204 (6%)
Query: 398 QLYDKSLEVYNSMLQNAIRPNTIICNHILRVH-CREGQFREALTLLEDFHEQGINLNQYS 456
+L +K L + ML+ P N IL V G ++A L + G+ N S
Sbjct: 133 KLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRS 192
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRE 516
YN ++ C +A +L +ML+R+V+P V +Y LI GF ++ +
Sbjct: 193 YNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKG------------Q 240
Query: 517 MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTV 576
+N A L +M G +P+ +YT L++ C+ + A +L MK KG PD+V Y
Sbjct: 241 VNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNT 300
Query: 577 LIAWYHKHGRIGEKNKLFGEMKAN 600
+I + + R + K+ +M +N
Sbjct: 301 MILGFCREDRAMDARKVLDDMLSN 324
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 12/202 (5%)
Query: 254 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 313
G ++ A E+ G P +Y ++ C + +A++L K+ + + +
Sbjct: 169 GYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSY 228
Query: 314 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 373
+I GFC++G VN A+E+L++M + PD SY LLN+ C+K +
Sbjct: 229 KILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKL 288
Query: 374 CQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLE---VYNSMLQNAIRPNTIICNHILRVH 429
P +V+Y ++IL C+ D++++ V + ML N PN++ ++
Sbjct: 289 KGCNPDLVHYNTMILGFCRE--------DRAMDARKVLDDMLSNGCSPNSVSYRTLIGGL 340
Query: 430 CREGQFREALTLLEDFHEQGIN 451
C +G F E LE+ +G +
Sbjct: 341 CDQGMFDEGKKYLEEMISKGFS 362
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 4/189 (2%)
Query: 177 FNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLM 236
+N+L++ F N L A+Q+F + + S L++ ++
Sbjct: 193 YNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDML 252
Query: 237 ETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 292
G +P+ +YT +++ +R A ++L ++ G NP +V Y T I G C
Sbjct: 253 NKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAM 312
Query: 293 VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLL 352
A K++ + NS + +I G C +G +E + LEEM S P N L+
Sbjct: 313 DARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLV 372
Query: 353 NAFCKKGDV 361
FC G V
Sbjct: 373 KGFCSFGKV 381
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 85/202 (42%), Gaps = 13/202 (6%)
Query: 152 GYCKCDD---SFEQFSTLLD---LPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGL 205
+C DD +++ F +L+ +P V + +LI+ F + A ++ N G
Sbjct: 199 AFCLNDDLSIAYQLFGKMLERDVVP--DVDSYKILIQGFCRKGQVNGAMELLDDMLNKGF 256
Query: 206 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM--SCGDIRL--AAE 261
S LL L + G P++ Y M+ C + R A +
Sbjct: 257 VPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARK 316
Query: 262 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 321
+L + +G +P V+Y T I GLC+ G D K + ++ K + N ++ GFC
Sbjct: 317 VLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFC 376
Query: 322 QRGAVNEALEVLE-EMKSSRTF 342
G V EA +V+E MK+ T
Sbjct: 377 SFGKVEEACDVVEVVMKNGETL 398
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 142/327 (43%), Gaps = 16/327 (4%)
Query: 176 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 235
+F VL++ FAS M++ A +V G E ++ CL L
Sbjct: 185 LFVVLVQRFASADMVKKAIEVLDEMPKFGFEPD----EYVFGCLLDALCKHGSVKDAAKL 240
Query: 236 METGPLP---NIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
E + N+ +T ++ G + A +L ++ +G P +V Y + G
Sbjct: 241 FEDMRMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANA 300
Query: 289 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 348
G + A+ L+R + + N++C+ +I C+ + EA++V EM+ DV +Y
Sbjct: 301 GKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTY 360
Query: 349 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYN 408
L++ FCK G + + PS + Y +++ + K + +++ LE+
Sbjct: 361 TALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKK----ESFEECLELME 416
Query: 409 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 468
M Q P+ I N ++R+ C+ G+ +EA+ L + E G++ ++ +I+ + +
Sbjct: 417 KMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQG 476
Query: 469 YPKMALELMPRMLKRNVLPGVVNYSTL 495
A + M+ R + V Y TL
Sbjct: 477 CLLEASDHFKEMVTRGLF-SVSQYGTL 502
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 117/244 (47%), Gaps = 24/244 (9%)
Query: 378 PSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFRE 437
P ++ ++L + + + K++EV + M + P+ + +L C+ G ++
Sbjct: 178 PQLIEPELFVVLVQ-RFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKD 236
Query: 438 ALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 497
A L ED + +N + +++ C+ A ++ +M + P +V+Y+ L+S
Sbjct: 237 AAKLFEDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLS 295
Query: 498 GFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 557
G+A +M A L ++M R G PN YT LI CK+D ++ A +
Sbjct: 296 GYAN------------AGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMK 343
Query: 558 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKLQDPKLV 617
+F EM+R DVVTYT L++ + K G+I +K + I+LDD IKK P +
Sbjct: 344 VFVEMERYECEADVVTYTALVSGFCKWGKI---DKCY-------IVLDDMIKKGLMPSEL 393
Query: 618 QFMN 621
+M+
Sbjct: 394 TYMH 397
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 143/323 (44%), Gaps = 20/323 (6%)
Query: 256 IRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNA 315
++ A E+L ++ + G P +G + LC+ G V A KL + + P+N F +
Sbjct: 199 VKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRF-PVNLRYFTS 257
Query: 316 VIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ 375
+++G+C+ G + EA VL +M + PD+ Y LL+ + G +
Sbjct: 258 LLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRG 317
Query: 376 IKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQ 434
+P+ YT LI LCK +++++V+ M + + + ++ C+ G+
Sbjct: 318 FEPNANCYTVLIQALCK-----VDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGK 372
Query: 435 FREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYST 494
+ +L+D ++G+ ++ +Y I+ K+ + LELM +M + P + Y+
Sbjct: 373 IDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNV 432
Query: 495 LISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDL 554
+I K E+ A L+ EM G P + T+ +I+G +
Sbjct: 433 VIRLACK------------LGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLE 480
Query: 555 ATQLFDEMKRKGIFPDVVTYTVL 577
A+ F EM +G+F V Y L
Sbjct: 481 ASDHFKEMVTRGLFS-VSQYGTL 502
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 127/290 (43%), Gaps = 19/290 (6%)
Query: 309 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFP-DVYSYNMLLNAFCKKGDVXXXXXX 367
+ + F ++ C+ G+V +A ++ E+M+ FP ++ + LL +C+ G +
Sbjct: 217 DEYVFGCLLDALCKHGSVKDAAKLFEDMRMR--FPVNLRYFTSLLYGWCRVGKMMEAKYV 274
Query: 368 XXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 427
+P IV+YT+L+ N K YD + M + PN +++
Sbjct: 275 LVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYD----LLRDMRRRGFEPNANCYTVLIQ 330
Query: 428 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 487
C+ + EA+ + + + +Y ++ CK ++ M+K+ ++P
Sbjct: 331 ALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMP 390
Query: 488 GVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 547
+ Y ++ K++S E +E L ++M +I P++ Y +I C
Sbjct: 391 SELTYMHIMVAHEKKESFEECLE------------LMEKMRQIEYHPDIGIYNVVIRLAC 438
Query: 548 KIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
K+ + A +L++EM+ G+ P V T+ ++I G + E + F EM
Sbjct: 439 KLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEM 488
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 129/289 (44%), Gaps = 19/289 (6%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
F ++ F V +A+EVL+EM PD Y + LL+A CK G V
Sbjct: 186 FVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR 245
Query: 373 XCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 431
+ ++ +TSL+ C+ G+ + K + V M + P+ + ++L +
Sbjct: 246 M-RFPVNLRYFTSLLYGWCRV---GKMMEAKYVLV--QMNEAGFEPDIVDYTNLLSGYAN 299
Query: 432 EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 491
G+ +A LL D +G N Y +I +CK + A+++ M + VV
Sbjct: 300 AGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVT 359
Query: 492 YSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 551
Y+ L+SGF K + +++ + + +M + G +P+ TY ++ K +
Sbjct: 360 YTALVSGFCK----WGKIDKCYI--------VLDDMIKKGLMPSELTYMHIMVAHEKKES 407
Query: 552 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 600
+ +L ++M++ PD+ Y V+I K G + E +L+ EM+ N
Sbjct: 408 FEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEEN 456
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 140/327 (42%), Gaps = 23/327 (7%)
Query: 265 KIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRG 324
K R P + + + LC+CG V L+R++ ++ P +++ FN + G+C+
Sbjct: 224 KRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKP-DANTFNVLFFGWCRVR 282
Query: 325 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX---XXXXXXCQIKPSIV 381
+A+++LEEM + P+ ++Y ++ FC+ G V P+
Sbjct: 283 DPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAK 342
Query: 382 NYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 441
+ +I+ K ++ + E+ M+ P+ ++ C + EA
Sbjct: 343 TFALMIVALAKNDKAEECF----ELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKF 398
Query: 442 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 501
L++ +G + +YN + ++C+ AL+L RM++ P V Y+ LIS F
Sbjct: 399 LDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMF-- 456
Query: 502 EQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE 561
FEM + + A + EM + C+ ++ TY +I+G A L +E
Sbjct: 457 ----FEM------DDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEE 506
Query: 562 MKRKGIFPDVVTYTVLIAWYHKHGRIG 588
+ KG+ + Y V ++ + +G
Sbjct: 507 VVNKGL---KLPYRVFDSFLMRLSEVG 530
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 105/261 (40%), Gaps = 55/261 (21%)
Query: 340 RTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQL 399
+T P++ ++NMLL+A CK G V +G+ L
Sbjct: 229 KTQPEINAFNMLLDALCKCGLVK--------------------------------EGEAL 256
Query: 400 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 459
+ +++ ++P+ N + CR ++A+ LLE+ E G ++Y
Sbjct: 257 LRR--------MRHRVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCA 308
Query: 460 IIHMICKESYPKMALELMPRMLKRNVL---PGVVNYSTLISGFAKEQSNFEMVERLFTRE 516
I C+ A +L M+ + P ++ +I AK E E
Sbjct: 309 AIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFE------ 362
Query: 517 MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTV 576
L M GCLP++ TY +I+G C + +D A + DEM KG PD+VTY
Sbjct: 363 ------LIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNC 416
Query: 577 LIAWYHKHGRIGEKNKLFGEM 597
+ ++ + E KL+G M
Sbjct: 417 FLRVLCENRKTDEALKLYGRM 437
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%)
Query: 261 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 320
E++G++ +G P V TY I G+C VD A+K + ++ K +P + +N +
Sbjct: 362 ELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVL 421
Query: 321 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGD 360
C+ +EAL++ M SR P V +YNML++ F + D
Sbjct: 422 CENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDD 461
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 122/280 (43%), Gaps = 20/280 (7%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKG-DVXXXXXXXXXX 371
+NA I G ++A EV E M +PD + +L+ K G
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 372 XXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 430
+K S + L+ C LK +++L + M + IR NTI+ N ++ +
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLK-----EEALVIQTEMEKKGIRSNTIVYNTLMDAYN 390
Query: 431 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 490
+ E L + ++G+ + +YN ++ + P + L+ M + P V
Sbjct: 391 KSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVK 450
Query: 491 NYSTLISGFAKEQSNFEMVERLFTREM-NVACALFQEMSRIGCLPNLYTYTCLIDGFCKI 549
+Y+ LIS + + T++M ++A F M ++G P+ ++YT LI +
Sbjct: 451 SYTCLISAYGR------------TKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVS 498
Query: 550 DYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 589
+ + A F+EM ++GI P V TYT ++ + + G G+
Sbjct: 499 GWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGK 538
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/318 (19%), Positives = 137/318 (43%), Gaps = 15/318 (4%)
Query: 261 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 320
EI K+ G + +G ++ C+ G + A + ++ K N+ +N ++ +
Sbjct: 330 EIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAY 389
Query: 321 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 380
+ + E + EM+ P +YN+L++A+ ++ ++P++
Sbjct: 390 NKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNV 449
Query: 381 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 440
+YT LI + +++ D + + + M + ++P++ ++ + G +A
Sbjct: 450 KSYTCLISAYG---RTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYA 506
Query: 441 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 500
E+ ++GI + +Y ++ + +E+ ML+ + + Y+TL+ GFA
Sbjct: 507 SFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFA 566
Query: 501 KEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 560
K+ E A + E S++G P++ TY L++ + + QL
Sbjct: 567 KQGLYIE------------ARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLK 614
Query: 561 EMKRKGIFPDVVTYTVLI 578
EM + PD +TY+ +I
Sbjct: 615 EMAALNLKPDSITYSTMI 632
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 140/373 (37%), Gaps = 58/373 (15%)
Query: 176 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 235
VF L+K F + E A + + G+ + N L+ +
Sbjct: 346 VFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEM 405
Query: 236 METGPLPNIHTYTIMMSCGDIRLAAEILGKIYRS----GGNPTVVTYGTYIRGLCECGYV 291
+ G P+ TY I+M R+ +I+ + R G P V +Y I +
Sbjct: 406 RDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKM 465
Query: 292 D--VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 349
A +R L P +SH + A+IH + G +A EEM
Sbjct: 466 SDMAADAFLRMKKVGLKP-SSHSYTALIHAYSVSGWHEKAYASFEEM------------- 511
Query: 350 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNS 409
CK+G IKPS+ YTS++ + + K +E++
Sbjct: 512 ------CKEG----------------IKPSVETYTSVL----DAFRRSGDTGKLMEIWKL 545
Query: 410 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 469
ML+ I+ I N +L ++G + EA ++ +F + G+ + +YN +++ +
Sbjct: 546 MLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQ 605
Query: 470 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSR 529
+L+ M N+ P + YST+I F + R+ A + M +
Sbjct: 606 DAKLPQLLKEMAALNLKPDSITYSTMIYAFVR------------VRDFKRAFFYHKMMVK 653
Query: 530 IGCLPNLYTYTCL 542
G +P+ +Y L
Sbjct: 654 SGQVPDPRSYEKL 666
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/325 (19%), Positives = 127/325 (39%), Gaps = 34/325 (10%)
Query: 171 HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXX 230
+ +V+N L+ + ++ +E +F ++ GL+ + N L+
Sbjct: 376 RSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVET 435
Query: 231 XXXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
+ + G PN+ +YT ++S YG + + +
Sbjct: 436 LLREMEDLGLEPNVKSYTCLISA------------------------YGR-TKKMSDMA- 469
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
A +R L P +SH + A+IH + G +A EEM P V +Y
Sbjct: 470 ---ADAFLRMKKVGLKP-SSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTS 525
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
+L+AF + GD +IK + + Y +L+ + Q LY ++ +V +
Sbjct: 526 VLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLL----DGFAKQGLYIEARDVVSEF 581
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
+ ++P+ + N ++ + R GQ + LL++ + + +Y+ +I+ +
Sbjct: 582 SKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDF 641
Query: 471 KMALELMPRMLKRNVLPGVVNYSTL 495
K A M+K +P +Y L
Sbjct: 642 KRAFFYHKMMVKSGQVPDPRSYEKL 666
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/351 (18%), Positives = 140/351 (39%), Gaps = 27/351 (7%)
Query: 262 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 321
I ++ + G + Y T + + +++ L ++ K ++ +N ++ +
Sbjct: 366 IQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYA 425
Query: 322 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX-XXXXXCQIKPSI 380
+R + +L EM+ P+V SY L++A+ + + +KPS
Sbjct: 426 RRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSS 485
Query: 381 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALT 440
+YT+LI + ++K+ + M + I+P+ +L R G + +
Sbjct: 486 HSYTALI----HAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLME 541
Query: 441 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 500
+ + + I + +YN ++ K+ A +++ K + P V+ Y+ L++ +A
Sbjct: 542 IWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYA 601
Query: 501 KEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 560
+ + ++ + L +EM+ + P+ TY+ +I F ++ A
Sbjct: 602 RGGQDAKLPQ------------LLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHK 649
Query: 561 EMKRKGIFPDVVTYTVLIAWYHKHGR----------IGEKNKLFGEMKANC 601
M + G PD +Y L A + +G N FG +KA
Sbjct: 650 MMVKSGQVPDPRSYEKLRAILEDKAKTKNRKDKTAILGIINSKFGRVKAKT 700
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 88/472 (18%), Positives = 183/472 (38%), Gaps = 57/472 (12%)
Query: 174 VLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXX 233
V ++N ++ N + A V+ K GL + L+K L
Sbjct: 228 VFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQ 287
Query: 234 XLMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECG 289
+ E P++ YT M+ S G++ + + ++ R P V+ YGT + GLC+ G
Sbjct: 288 RMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDG 347
Query: 290 YVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 349
V+ ++L ++ K ++ + +I GF G V A + E++ S D+ YN
Sbjct: 348 RVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYN 407
Query: 350 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI---------------------- 387
++ C V +++P + ++
Sbjct: 408 AVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGEL 467
Query: 388 -------------LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQ 434
LLC ++ K +L+V+ +L+ + + N ++ + G
Sbjct: 468 GYPVSDYLTQFFKLLCADEEKNAM----ALDVF-YILKTKGHGSVSVYNILMEALYKMGD 522
Query: 435 FREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYST 494
+++L+L + + G + SY+ I ++ K A ++++ + +P + Y +
Sbjct: 523 IQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYLS 582
Query: 495 LISGFAKEQSNFEMVERLFTREMNVACALFQE-MSRIGCLPNLYTYTCLIDGFCKIDYID 553
L G + E++ L +E + + P + Y + CK +
Sbjct: 583 LTKGLCQ------------IGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAE 630
Query: 554 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
++ DEM ++G+F + V Y +I+ KHG I ++F E+K ++ +
Sbjct: 631 KVMKVVDEMNQEGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKRKVMTE 682
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 144/348 (41%), Gaps = 32/348 (9%)
Query: 265 KIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRG 324
K+ + G P V Y + L + GY D+A + S F ++ G C+ G
Sbjct: 218 KMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAG 277
Query: 325 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYT 384
+ E LE+L+ M+ + PDV++Y ++ +G++ +IKP ++ Y
Sbjct: 278 RIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYG 337
Query: 385 SLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLE 443
+L++ LCK+ G+ ++ E++ M I + I ++ +G+ R A L E
Sbjct: 338 TLVVGLCKD---GR--VERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWE 392
Query: 444 DFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA--K 501
D + G + YN +I +C + A +L ++ + P S ++ +
Sbjct: 393 DLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMN 452
Query: 502 EQSNFEMV-ERL----------FTREMNVACALFQEMSRIGCLPNLY-----------TY 539
S+F V ER+ T+ + CA E L Y Y
Sbjct: 453 RLSDFSNVLERIGELGYPVSDYLTQFFKLLCA--DEEKNAMALDVFYILKTKGHGSVSVY 510
Query: 540 TCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 587
L++ K+ I + LF EM++ G PD +Y++ I + + G +
Sbjct: 511 NILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDV 558
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 102/231 (44%), Gaps = 16/231 (6%)
Query: 378 PSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFRE 437
PS + LI + + +G ++Y VY M + +P + N I+ + G F
Sbjct: 191 PSEKQFEILIRMHADNRRGLRVY----YVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDL 246
Query: 438 ALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 497
AL + EDF E G+ ++ ++ +CK + LE++ RM + P V Y+ +I
Sbjct: 247 ALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIK 306
Query: 498 GFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 557
E + ++ + ++ EM R P++ Y L+ G CK ++ +
Sbjct: 307 TLVSEGN------------LDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYE 354
Query: 558 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 608
LF EMK K I D Y VLI + G++ L+ ++ + + D GI
Sbjct: 355 LFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGI 405
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 128/316 (40%), Gaps = 20/316 (6%)
Query: 276 VTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVI--HGFCQRGAVNEALEVL 333
Y + L G+ A +L + + P + F +I H +RG V
Sbjct: 159 AAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGL--RVYYVY 216
Query: 334 EEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNK 393
E+MK P V+ YN +++A K G + + T+ ++L K
Sbjct: 217 EKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGL---VEESTTFMILVKGL 273
Query: 394 LKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLN 453
K ++ ++ LE+ M +N +P+ +++ EG +L + ++ I +
Sbjct: 274 CKAGRI-EEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPD 332
Query: 454 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLF 513
+Y ++ +CK+ + EL M + +L Y LI GF +
Sbjct: 333 VMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADG---------- 382
Query: 514 TREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVT 573
++ AC L++++ G + ++ Y +I G C ++ +D A +LF + + PD T
Sbjct: 383 --KVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFET 440
Query: 574 YTVLIAWYHKHGRIGE 589
+ ++ Y R+ +
Sbjct: 441 LSPIMVAYVVMNRLSD 456
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 12/187 (6%)
Query: 425 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 484
++R+H + + E + G + YN I+ + K Y +AL + +
Sbjct: 199 LIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDG 258
Query: 485 VLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLID 544
++ + L+ G K EM+E + Q M C P+++ YT +I
Sbjct: 259 LVEESTTFMILVKGLCKAGRIEEMLE------------ILQRMRENLCKPDVFAYTAMIK 306
Query: 545 GFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILL 604
+D + +++DEM+R I PDV+ Y L+ K GR+ +LF EMK IL+
Sbjct: 307 TLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILI 366
Query: 605 DDGIKKL 611
D I ++
Sbjct: 367 DREIYRV 373
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/408 (20%), Positives = 157/408 (38%), Gaps = 78/408 (19%)
Query: 110 KFGSWV-ETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLL- 167
+F SWV + +G+ H+ + + I +AG C F+Q +L
Sbjct: 663 RFFSWVGKRNGYKHNSEAYNMSIK---VAG-----------------CGKDFKQMRSLFY 702
Query: 168 DLPHHSVLV----FNVLIKVFASNSMLEHAHQVFVSAKNVGL--ELHIRSCNFLLKCLXX 221
++ L+ + ++I + + A + F K++GL C + C
Sbjct: 703 EMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKK 762
Query: 222 XXXXXXXXXXXXXLMETGPLPNIHTYTIMMSC-------GDIRLAAEILGKIYRSGGNPT 274
++ +G +P+ + C D + + LGKI G P
Sbjct: 763 GRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKI----GFPV 818
Query: 275 VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 334
V Y YIR LC G ++ A + + L+ + + +++HG QRG + +AL+ +
Sbjct: 819 TVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVN 878
Query: 335 EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKL 394
MK T P V+ Y L+ F K+ + +PS+V YT++
Sbjct: 879 SMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAM-------- 930
Query: 395 KGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQ 454
IC ++ G+ EA + E+G + +
Sbjct: 931 --------------------------ICGYM-----SLGKVEEAWNAFRNMEERGTSPDF 959
Query: 455 YSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKE 502
+Y++ I+ +C+ + AL+L+ ML + + P +N+ T+ G +E
Sbjct: 960 KTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINFRTVFYGLNRE 1007
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 124/298 (41%), Gaps = 31/298 (10%)
Query: 316 VIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC-KKG-DVXXXXXXXXXXXX 373
+I + + G N A+ +EMK P ++ L+ C KKG +V
Sbjct: 719 MIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCEKKGRNVEEATRTFREMIR 778
Query: 374 CQIKPS---IVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 430
P + +Y + N + D L P T+ + +R C
Sbjct: 779 SGFVPDRELVQDYLGCLCEVGNTKDAKSCLDS--------LGKIGFPVTVAYSIYIRALC 830
Query: 431 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 490
R G+ EAL+ L F + L+QY+Y I+H + + + AL+ + M + PGV
Sbjct: 831 RIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVH 890
Query: 491 NYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 550
Y++LI F KE+ +++E C Q+M C P++ TYT +I G+ +
Sbjct: 891 VYTSLIVYFFKEKQLEKVLE---------TC---QKMEGESCEPSVVTYTAMICGYMSLG 938
Query: 551 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 608
++ A F M+ +G PD TY+ I + + + KL EM LD GI
Sbjct: 939 KVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEM------LDKGI 990
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/372 (21%), Positives = 157/372 (42%), Gaps = 44/372 (11%)
Query: 268 RSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVN 327
+ G + V Y T + E +D+ +LV ++ + + +I + + +
Sbjct: 182 KDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIG 241
Query: 328 EALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI 387
+ L V E+M+ S D +YN+++ + C G I + Y ++
Sbjct: 242 KGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTY-KML 300
Query: 388 LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIIC--------NHILRVHCREGQFREAL 439
L C K + ++V S+ + +R IC ++L+ C G+ +EAL
Sbjct: 301 LDCIAK-------SEKVDVVQSIADDMVR----ICEISEHDAFGYLLKSFCVSGKIKEAL 349
Query: 440 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 499
L+ + + + L+ + ++ +C+ + ALE++ ++KR L Y +ISG+
Sbjct: 350 ELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVD-IMKRRKLDDSNVYGIIISGY 408
Query: 500 ------AKEQSNFEMVER----------------LFT-REMNVACALFQEMSRIGCLPNL 536
+K FE++++ LF ++ C LF EM G P+
Sbjct: 409 LRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDS 468
Query: 537 YTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE 596
T ++ G + + A ++F M+ KGI P +Y++ + + R E K+F +
Sbjct: 469 VAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQ 528
Query: 597 MKANCILLDDGI 608
M A+ I++ D I
Sbjct: 529 MHASKIVIRDDI 540
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/411 (18%), Positives = 157/411 (38%), Gaps = 53/411 (12%)
Query: 110 KFGSWV-ETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLD 168
+F +WV + GFSH V + ++ + A +L++ L + CD
Sbjct: 174 RFFNWVKQKDGFSHRVGIYNTML-SIAGEARNLDMVDELVSEMEKNGCD----------- 221
Query: 169 LPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXX 228
+ + +LI V+ + VF + G EL + N +++ L
Sbjct: 222 ---KDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLA 278
Query: 229 XXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRG 284
+ME G + TY +++ C + + I + R +G ++
Sbjct: 279 LEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKS 338
Query: 285 LCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 344
C G + A +L+R+L K L++ F ++ G C+ + +ALE+++ MK R D
Sbjct: 339 FCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKR-RKLDD 397
Query: 345 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSL---ILLCKNKLKGQQLYD 401
Y ++++ + ++ DV P + YT + + K KG L++
Sbjct: 398 SNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFN 457
Query: 402 KSLE----------------------------VYNSMLQNAIRPNTIICNHILRVHCREG 433
+ +E V++SM + I+P + ++ CR
Sbjct: 458 EMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSS 517
Query: 434 QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 484
++ E + + H I + ++ +I + K K + L+ + KR+
Sbjct: 518 RYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNG-EKEKIHLIKEIQKRS 567
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 132/299 (44%), Gaps = 22/299 (7%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
+ V + G EALEVLEEMK Y+ML+ AF + +V
Sbjct: 251 YTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAG 310
Query: 373 XCQI--KPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 430
++ P + L+ + + + + +LEV +M + ++ I I+
Sbjct: 311 GKKLLKDPEMCLKVVLMYVREGNM------ETTLEVVAAMRKAELKVTDCILCAIVNGFS 364
Query: 431 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK-ESYPKMALELMPRMLKRNVLPGV 489
++ F EA+ + E ++ Q +Y I+ C+ E Y K + L M+K+ V
Sbjct: 365 KQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEM-LFDEMVKKGFDKCV 423
Query: 490 VNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKI 549
V YS ++ + K TR ++ A L +M + GC PN++ Y LID +
Sbjct: 424 VAYSNIMDMYGK------------TRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRA 471
Query: 550 DYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 608
+ A +++ EMKR + PD V+YT +I+ Y++ + +L+ E + N +D +
Sbjct: 472 MDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAM 530
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/329 (22%), Positives = 133/329 (40%), Gaps = 11/329 (3%)
Query: 176 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 235
F + +K FA+ + A +F K ++ + + N LL L L
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 236 METGPLPNIHTYTIMMSCGDIRL-----AAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
E PN+ TYT++++ G R+ AA I + G P +V + + GL
Sbjct: 291 KERFT-PNMMTYTVLLN-GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRK 348
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
A KL + K N + +I FC++ ++ A+E ++M S PD Y
Sbjct: 349 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 408
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
L+ F + + P Y +LI L N Q++ + + +YN M
Sbjct: 409 LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN----QKMPEHATRIYNKM 464
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
+QN I P+ N I++ + + + E+ ++GI + SY +I + E
Sbjct: 465 IQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKS 524
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGF 499
+ A + ML + + +++Y+ + F
Sbjct: 525 REACRYLEEMLDKGMKTPLIDYNKFAADF 553
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/382 (19%), Positives = 158/382 (41%), Gaps = 35/382 (9%)
Query: 236 METGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 291
M T L + T+TI M + + + A I + + V T + L
Sbjct: 221 MGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLG 280
Query: 292 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 351
A L KL + P N + +++G+C+ + EA + +M PD+ ++N++
Sbjct: 281 KEAQVLFDKLKERFTP-NMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVM 339
Query: 352 LNAFC---KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVY 407
L KK D C P++ +YT +I CK Q + ++E +
Sbjct: 340 LEGLLRSRKKSDAIKLFHVMKSKGPC---PNVRSYTIMIRDFCK-----QSSMETAIEYF 391
Query: 408 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 467
+ M+ + ++P+ + ++ + + LL++ E+G + +YN +I ++ +
Sbjct: 392 DDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ 451
Query: 468 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEM 527
P+ A + +M++ + P + ++ ++ + R + A+++EM
Sbjct: 452 KMPEHATRIYNKMIQNEIEPSIHTFNMIMKSY------------FMARNYEMGRAVWEEM 499
Query: 528 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR- 586
+ G P+ +YT LI G A + +EM KG+ ++ Y A +H+ G+
Sbjct: 500 IKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP 559
Query: 587 -----IGEKNKLFGEMKANCIL 603
+ ++ K G+ A I
Sbjct: 560 EIFEELAQRAKFSGKFAAAEIF 581
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/297 (20%), Positives = 130/297 (43%), Gaps = 26/297 (8%)
Query: 323 RGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVN 382
R + + +VL + R P++ +Y +LLN +C+ ++ +KP IV
Sbjct: 276 RAKLGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVA 335
Query: 383 YTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLL 442
+ ++ + L+ ++ D ++++++ M PN ++R C++ A+
Sbjct: 336 HN---VMLEGLLRSRKKSD-AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYF 391
Query: 443 EDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKE 502
+D + G+ + Y +I + EL+ M ++ P Y+ LI K
Sbjct: 392 DDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALI----KL 447
Query: 503 QSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM 562
+N +M E A ++ +M + P+++T+ ++ + ++ +++EM
Sbjct: 448 MANQKMPEH--------ATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEM 499
Query: 563 KRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKLQDPKLVQF 619
+KGI PD +YTVLI G IGE G+ + C L++ + K L+ +
Sbjct: 500 IKKGICPDDNSYTVLI-----RGLIGE-----GKSREACRYLEEMLDKGMKTPLIDY 546
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 81/178 (45%), Gaps = 14/178 (7%)
Query: 423 NHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLK 482
N ++ + + QF +++LE+ +G+ L ++ + K A+ + M K
Sbjct: 199 NSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAMKAFAAAKERKKAVGIFELMKK 257
Query: 483 RNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCL 542
GV + L+ + + E A LF ++ PN+ TYT L
Sbjct: 258 YKFKIGVETINCLLDSLGRAKLGKE------------AQVLFDKLKE-RFTPNMMTYTVL 304
Query: 543 IDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 600
++G+C++ + A +++++M +G+ PD+V + V++ + + + KLF MK+
Sbjct: 305 LNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSK 362
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 137/343 (39%), Gaps = 68/343 (19%)
Query: 285 LCECGYVDVAHKLVRK---------LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEE 335
+ E G VDV KL+ L K+ +S + ++ G+ + G V + +LE
Sbjct: 380 VSEEGVVDVFKKLLPNSVDPSGEPPLLPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEA 439
Query: 336 MK---SSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 392
M+ + PD +Y +++AF G
Sbjct: 440 MRRQDDRNSHPDEVTYTTVVSAFVNAG--------------------------------- 466
Query: 393 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ-GIN 451
L D++ +V M + + N I N +L+ +C++ Q A LL + E GI
Sbjct: 467 ------LMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIE 520
Query: 452 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVER 511
+ SYN II AL M R + P ++Y+TL+ FA ++ R
Sbjct: 521 PDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAM-SGQPKLANR 579
Query: 512 LFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 571
+F MN R+ +L + L++G+C++ I+ A ++ MK G +P+V
Sbjct: 580 VFDEMMNDP--------RVKV--DLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNV 629
Query: 572 VTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKKLQDP 614
TY L + + G+ L+ E+K C +KK + P
Sbjct: 630 ATYGSLANGVSQARKPGDALLLWKEIKERC-----AVKKKEAP 667
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 113/252 (44%), Gaps = 15/252 (5%)
Query: 242 PNIHTYTIMMSC----GDIRLAAEILGKIYRS---GGNPTVVTYGTYIRGLCECGYVDVA 294
P+ YT +M G + A +L + R +P VTY T + G +D A
Sbjct: 412 PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRA 471
Query: 295 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF-PDVYSYNMLLN 353
+++ ++ P N +N ++ G+C++ ++ A ++L EM PDV SYN++++
Sbjct: 472 RQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIID 531
Query: 354 AFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQ-QLYDKSLEVYNSMLQ 412
D I P+ ++YT+L+ + GQ +L ++ V++ M+
Sbjct: 532 GCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAF--AMSGQPKLANR---VFDEMMN 586
Query: 413 NA-IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 471
+ ++ + I N ++ +CR G +A ++ E G N +Y + + + + P
Sbjct: 587 DPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPG 646
Query: 472 MALELMPRMLKR 483
AL L + +R
Sbjct: 647 DALLLWKEIKER 658
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 121/274 (44%), Gaps = 15/274 (5%)
Query: 320 FCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPS 379
F V++ALE+ + + T +VY N +L+ K G + +KP
Sbjct: 141 FVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPD 200
Query: 380 IVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREAL 439
+V Y +L+ C +K + Y K++E+ + N I+ ++++ +L + G+ EA
Sbjct: 201 VVTYNTLLAGC---IKVKNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAE 257
Query: 440 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 499
++ +G + N Y Y+ +++ + K A ELM M ++P V +TL+ +
Sbjct: 258 NFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVY 317
Query: 500 AKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLF 559
K LF R L E+ G N Y L+DG K ++ A +F
Sbjct: 318 IKGG--------LFDRSRE----LLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIF 365
Query: 560 DEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKL 593
D+MK KG+ D +++I+ + R E +L
Sbjct: 366 DDMKGKGVRSDGYANSIMISALCRSKRFKEAKEL 399
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 112/251 (44%), Gaps = 42/251 (16%)
Query: 377 KPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFR 436
K S+ Y+S I K G + K+LE+Y S+ + + N ICN IL + G+
Sbjct: 129 KISVSTYSSCI-----KFVGAKNVSKALEIYQSIPDESTKINVYICNSILSCLVKNGKLD 183
Query: 437 EALTLLEDFHEQGINLNQYSYNEIIH--MICKESYPKMALELMPRMLKRNVLPGVVNYST 494
+ L + G+ + +YN ++ + K YPK A+EL+ + + V Y T
Sbjct: 184 SCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNGYPK-AIELIGELPHNGIQMDSVMYGT 242
Query: 495 LIS-----GFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC-K 548
+++ G ++E NF Q+M G PN+Y Y+ L++ + K
Sbjct: 243 VLAICASNGRSEEAENF-----------------IQQMKVEGHSPNIYHYSSLLNSYSWK 285
Query: 549 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN-------- 600
DY A +L EMK G+ P+ V T L+ Y K G +L E+++
Sbjct: 286 GDY-KKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMP 344
Query: 601 -CILLDDGIKK 610
C+L+ DG+ K
Sbjct: 345 YCMLM-DGLSK 354
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/431 (18%), Positives = 170/431 (39%), Gaps = 28/431 (6%)
Query: 78 SSVSPVPETNRELFHVVVRVIKSLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMA 137
++V+ P + R + R KS ++ R F S ++ V +I+ F ++
Sbjct: 54 ANVAEAPRSKRHSNSYLAR--KSAISEVQRSSDFLSSLQRLATVLKVQDLNVILRDFGIS 111
Query: 138 GMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVF 197
G + D + F + SV ++ IK F + A +++
Sbjct: 112 G----------------RWQDLIQLFEWMQQHGKISVSTYSSCIK-FVGAKNVSKALEIY 154
Query: 198 VSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTY-TIMMSCGDI 256
S + ++++ CN +L CL + G P++ TY T++ C +
Sbjct: 155 QSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKV 214
Query: 257 R----LAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHC 312
+ A E++G++ +G V YGT + G + A ++++ + H N +
Sbjct: 215 KNGYPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYH 274
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
++++++ + +G +A E++ EMKS P+ LL + K G
Sbjct: 275 YSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELE 334
Query: 373 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 432
+ + Y L+ + L +++ +++ M +R + + ++ CR
Sbjct: 335 SAGYAENEMPYCMLM----DGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRS 390
Query: 433 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 492
+F+EA L D + N ++ C+ + + +M +M ++ V P +
Sbjct: 391 KRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTF 450
Query: 493 STLISGFAKEQ 503
LI F KE+
Sbjct: 451 HILIKYFIKEK 461
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 114/266 (42%), Gaps = 52/266 (19%)
Query: 374 CQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREG 433
C+IKP + +LL + +G +YDK++EVY M PNT N ++ V+ +
Sbjct: 104 CEIKPRV-----FLLLLEIFWRGH-IYDKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLN 157
Query: 434 QFREALTLLEDFH----------------------------------EQGINLNQYSYNE 459
AL + E +G N+ + +
Sbjct: 158 VVNGALEIFEGIRFRNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQ 217
Query: 460 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNV 519
I+ + C+ A +++ M+ + V +S L+SGF + + E
Sbjct: 218 ILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFR------------SGEPQK 265
Query: 520 ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 579
A LF +M +IGC PNL TYT LI GF + +D A + +++ +G+ PD+V ++I
Sbjct: 266 AVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIH 325
Query: 580 WYHKHGRIGEKNKLFGEMKANCILLD 605
Y + GR E K+F ++ ++ D
Sbjct: 326 TYTRLGRFEEARKVFTSLEKRKLVPD 351
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 147/346 (42%), Gaps = 41/346 (11%)
Query: 238 TGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDV 293
+G +++ +++++S G+ + A ++ K+ + G +P +VTY + I+G + G VD
Sbjct: 241 SGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDE 300
Query: 294 AHKLVRKLHCK-LHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLL 352
A ++ K+ + L P C N +IH + + G EA +V ++ + PD Y++ +L
Sbjct: 301 AFTVLSKVQSEGLAPDIVLC-NLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASIL 359
Query: 353 NAFCKKGDVXXXXXXXXXXXXCQIKPSIVN--YTSLILLCKNKLK------GQQLYDKSL 404
++ C G + P I + T L+ N L G Y +L
Sbjct: 360 SSLCLSGKF-------------DLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSY--AL 404
Query: 405 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
+V + M + L CR G R A+ + + ++ +L+ + ++ II +
Sbjct: 405 KVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSL 464
Query: 465 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALF 524
+ A+ L R + VV+Y+ I G + + + A +L
Sbjct: 465 IELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVR------------AKRIEEAYSLC 512
Query: 525 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPD 570
+M G PN TY +I G CK + ++ E ++G+ D
Sbjct: 513 CDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRECIQEGVELD 558
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/374 (20%), Positives = 142/374 (37%), Gaps = 60/374 (16%)
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
V V L R + +P N F ++ C+ G V+EA +V+ M S V ++M
Sbjct: 194 VGVKIVLKRMIGEGFYP-NRERFGQILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSM 252
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
L++ F + G+ P++V YTSLI + D++ V + +
Sbjct: 253 LVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLI----KGFVDLGMVDEAFTVLSKV 308
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC----- 465
+ P+ ++CN ++ + R G+F EA + ++ + +QY++ I+ +C
Sbjct: 309 QSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKF 368
Query: 466 ---------------------------KESYPKMALELMPRMLKRNVLPGVVNYSTLISG 498
K Y AL+++ M ++ Y+ +S
Sbjct: 369 DLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYLSA 428
Query: 499 FA----------------KEQSNFE------MVERLFT-REMNVACALFQEMSRIGCLPN 535
KE+ + + +++ L + N A LF+ +
Sbjct: 429 LCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLD 488
Query: 536 LYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFG 595
+ +YT I G + I+ A L +MK GI+P+ TY +I+ K + K+
Sbjct: 489 VVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILR 548
Query: 596 EMKANCILLDDGIK 609
E + LD K
Sbjct: 549 ECIQEGVELDPNTK 562
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 128/282 (45%), Gaps = 27/282 (9%)
Query: 306 HPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFP-DVYSYNMLLNAFCK-KGDVXX 363
H F ++ C+ G + +A E + + S + FP DV +N++LN +C DV
Sbjct: 220 HTPYDEAFQGLLCALCRHGHIEKAEEFM--LASKKLFPVDVEGFNVILNGWCNIWTDVTE 277
Query: 364 XXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICN 423
I P+ +Y+ +I C +K+ L+D SL +Y+ M + + P + N
Sbjct: 278 AKRIWREMGNYCITPNKDSYSHMIS-CFSKVG--NLFD-SLRLYDEMKKRGLAPGIEVYN 333
Query: 424 HILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKR 483
++ V RE F EA+ L++ +E+G+ + +YN +I +C+ +A ++ M+
Sbjct: 334 SLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISE 393
Query: 484 NVLPGV---------VNYSTL--------ISGFAKEQSNFEMV-ERLFT-REMNVACALF 524
N+ P V VN+ IS + F ++ +LF ++ A ++
Sbjct: 394 NLSPTVDTFHAFLEAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIW 453
Query: 525 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKG 566
EM R + N Y I G +++ A +++ EMK KG
Sbjct: 454 AEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKG 495
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 132/329 (40%), Gaps = 11/329 (3%)
Query: 176 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 235
F + +K FA+ + A +F K ++ + + N LL L L
Sbjct: 231 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 290
Query: 236 METGPLPNIHTYTIMMSCGDIRL-----AAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
E PN+ TYT++++ G R+ AA I + G P +V + + GL
Sbjct: 291 KERFT-PNMMTYTVLLN-GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMK 348
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
A KL + K N + +I FC++ ++ A+E ++M S PD Y
Sbjct: 349 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 408
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
L+ F + + P Y +LI L N Q++ + +YN M
Sbjct: 409 LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN----QKMPEHGTRIYNKM 464
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
+QN I P+ N I++ + + + ++ ++GI + SY +I + E
Sbjct: 465 IQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS 524
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGF 499
+ A + ML + + +++Y+ + F
Sbjct: 525 REACRYLEEMLDKGMKTPLIDYNKFAADF 553
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/382 (19%), Positives = 156/382 (40%), Gaps = 35/382 (9%)
Query: 236 METGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 291
M T L + T+TI M + + + A I + + V T + L
Sbjct: 221 MGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLG 280
Query: 292 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 351
A L KL + P N + +++G+C+ + EA + +M PD+ ++N++
Sbjct: 281 KEAQVLFDKLKERFTP-NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVM 339
Query: 352 LNAFC---KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVY 407
L KK D C P++ +YT +I CK Q + ++E +
Sbjct: 340 LEGLLRSMKKSDAIKLFHVMKSKGPC---PNVRSYTIMIRDFCK-----QSSMETAIEYF 391
Query: 408 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 467
+ M+ + ++P+ + ++ + + LL++ E+G + +YN +I ++ +
Sbjct: 392 DDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ 451
Query: 468 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEM 527
P+ + +M++ + P + ++ ++ + R + A++ EM
Sbjct: 452 KMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY------------FVARNYEMGRAVWDEM 499
Query: 528 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR- 586
+ G P+ +YT LI G A + +EM KG+ ++ Y A +H+ G+
Sbjct: 500 IKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP 559
Query: 587 -----IGEKNKLFGEMKANCIL 603
+ ++ K G+ A I
Sbjct: 560 EIFEELAQRAKFSGKFAAAEIF 581
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 133/325 (40%), Gaps = 34/325 (10%)
Query: 308 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 367
L F + F +A+ + E MK + V + N LL++ + +
Sbjct: 227 LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQV 285
Query: 368 XXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 427
+ P+++ YT +L + + L + + ++N M+ + ++P+ + N +L
Sbjct: 286 LFDKLKERFTPNMMTYT---VLLNGWCRVRNLIEAA-RIWNDMIDHGLKPDIVAHNVMLE 341
Query: 428 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 487
R + +A+ L +G N SY +I CK+S + A+E M+ + P
Sbjct: 342 GLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQP 401
Query: 488 GVVNYSTLISGFAKEQSN-------FEMVERLFTREMNVACALF-----QEMSRIGCL-- 533
Y+ LI+GF ++ EM E+ + AL Q+M G
Sbjct: 402 DAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIY 461
Query: 534 ---------PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 584
P+++T+ ++ + ++ ++DEM +KGI PD +YTVLI
Sbjct: 462 NKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISE 521
Query: 585 GRIGEKNKLFGEMKANCILLDDGIK 609
G+ E + EM LD G+K
Sbjct: 522 GKSREACRYLEEM------LDKGMK 540
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/329 (21%), Positives = 132/329 (40%), Gaps = 11/329 (3%)
Query: 176 VFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXL 235
F + +K FA+ + A +F K ++ + + N LL L L
Sbjct: 230 TFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKL 289
Query: 236 METGPLPNIHTYTIMMSCGDIRL-----AAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
E PN+ TYT++++ G R+ AA I + G P +V + + GL
Sbjct: 290 KERFT-PNMMTYTVLLN-GWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMK 347
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
A KL + K N + +I FC++ ++ A+E ++M S PD Y
Sbjct: 348 KSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTC 407
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
L+ F + + P Y +LI L N Q++ + +YN M
Sbjct: 408 LITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMAN----QKMPEHGTRIYNKM 463
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
+QN I P+ N I++ + + + ++ ++GI + SY +I + E
Sbjct: 464 IQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS 523
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGF 499
+ A + ML + + +++Y+ + F
Sbjct: 524 REACRYLEEMLDKGMKTPLIDYNKFAADF 552
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/382 (19%), Positives = 156/382 (40%), Gaps = 35/382 (9%)
Query: 236 METGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYV 291
M T L + T+TI M + + + A I + + V T + L
Sbjct: 220 MGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLG 279
Query: 292 DVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 351
A L KL + P N + +++G+C+ + EA + +M PD+ ++N++
Sbjct: 280 KEAQVLFDKLKERFTP-NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVM 338
Query: 352 LNAFC---KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVY 407
L KK D C P++ +YT +I CK Q + ++E +
Sbjct: 339 LEGLLRSMKKSDAIKLFHVMKSKGPC---PNVRSYTIMIRDFCK-----QSSMETAIEYF 390
Query: 408 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 467
+ M+ + ++P+ + ++ + + LL++ E+G + +YN +I ++ +
Sbjct: 391 DDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQ 450
Query: 468 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEM 527
P+ + +M++ + P + ++ ++ + R + A++ EM
Sbjct: 451 KMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSY------------FVARNYEMGRAVWDEM 498
Query: 528 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR- 586
+ G P+ +YT LI G A + +EM KG+ ++ Y A +H+ G+
Sbjct: 499 IKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQP 558
Query: 587 -----IGEKNKLFGEMKANCIL 603
+ ++ K G+ A I
Sbjct: 559 EIFEELAQRAKFSGKFAAAEIF 580
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 133/325 (40%), Gaps = 34/325 (10%)
Query: 308 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 367
L F + F +A+ + E MK + V + N LL++ + +
Sbjct: 226 LTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSL-GRAKLGKEAQV 284
Query: 368 XXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 427
+ P+++ YT +L + + L + + ++N M+ + ++P+ + N +L
Sbjct: 285 LFDKLKERFTPNMMTYT---VLLNGWCRVRNLIEAA-RIWNDMIDHGLKPDIVAHNVMLE 340
Query: 428 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 487
R + +A+ L +G N SY +I CK+S + A+E M+ + P
Sbjct: 341 GLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQP 400
Query: 488 GVVNYSTLISGFAKEQSN-------FEMVERLFTREMNVACALF-----QEMSRIGCL-- 533
Y+ LI+GF ++ EM E+ + AL Q+M G
Sbjct: 401 DAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIY 460
Query: 534 ---------PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 584
P+++T+ ++ + ++ ++DEM +KGI PD +YTVLI
Sbjct: 461 NKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISE 520
Query: 585 GRIGEKNKLFGEMKANCILLDDGIK 609
G+ E + EM LD G+K
Sbjct: 521 GKSREACRYLEEM------LDKGMK 539
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/385 (23%), Positives = 149/385 (38%), Gaps = 74/385 (19%)
Query: 285 LCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 344
C+ G VD A +L+ L + LN + +IHGF + +++A ++ E+M+ D
Sbjct: 258 FCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNAD 317
Query: 345 VYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKP-------------------------- 378
+ Y++L+ CK D+ I P
Sbjct: 318 IALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVII 377
Query: 379 SIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQN----------------------AIR 416
++ S++LL K+ +G D E Y S +QN AI
Sbjct: 378 GDIDKKSVMLLYKSLFEGFIRNDLVHEAY-SFIQNLMGNYESDGVSEIVKLLKDHNKAIL 436
Query: 417 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 476
P++ + ++ + + A+TLL D + G+ YN II +CKE + +L+L
Sbjct: 437 PDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKL 496
Query: 477 MPRMLKRNVLPGVVNYSTLISGFAKEQSNFE-----------------------MVERLF 513
+ M V P + I G E+ +F +V++L
Sbjct: 497 LGEMKDAGVEPSQFTLNC-IYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLC 555
Query: 514 TREMNV-ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
V AC +++ G L ++ T IDG K + +D +LF ++ G PDV+
Sbjct: 556 ENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVI 615
Query: 573 TYTVLIAWYHKHGRIGEKNKLFGEM 597
Y VLI K R E + LF EM
Sbjct: 616 AYHVLIKALCKACRTMEADILFNEM 640
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/373 (20%), Positives = 139/373 (37%), Gaps = 62/373 (16%)
Query: 235 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
+ + G P+ T + C D A ++L K+ G P + ++ LCE G
Sbjct: 500 MKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGR 559
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
A K + + + + A I G + V+ LE+ ++ ++ PDV +Y++
Sbjct: 560 AVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDVIAYHV 619
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
L+ A CK C+ + + ++N M
Sbjct: 620 LIKALCK---------------ACRTMEADI------------------------LFNEM 640
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
+ ++P N ++ C+EG+ L+ + +E N + +Y +IH +C P
Sbjct: 641 VSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRP 700
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI 530
A+ M ++ P + + LI G K + E A F+EM
Sbjct: 701 SEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGE------------ALVYFREMEEK 748
Query: 531 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 590
P+ Y L+ F + I+ +F EM KG FP V ++A +
Sbjct: 749 EMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHKGRFPVSVDRNYMLA-------VNVT 801
Query: 591 NKLFGEMKANCIL 603
+K +++ +C L
Sbjct: 802 SKFVEDLRTSCYL 814
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 126/308 (40%), Gaps = 30/308 (9%)
Query: 308 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAF--CKKGDVXXXX 365
LN+ V++GF + G + + R D+Y+YN + + ++
Sbjct: 71 LNTKVVETVLNGFKRWGLAYLFFNWASKQEGYRN--DMYAYNAMASILSRARQNASLKAL 128
Query: 366 XXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAI-RPNTIICNH 424
C + P + + C L L D++ V++ + + + PN N
Sbjct: 129 VVDVLNSRCFMSPGAFGF---FIRC---LGNAGLVDEASSVFDRVREMGLCVPNAYTYNC 182
Query: 425 ILRVHCREGQFREAL--TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLK 482
+L + L L++ + G + ++++ ++ + C + AL + +L
Sbjct: 183 LLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILS 242
Query: 483 RNVLPGVVNYSTLIS--GFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYT 540
R L ++ ++S + + FE++E L R++ + N TY
Sbjct: 243 RGWLDEHISTILVVSFCKWGQVDKAFELIEMLEERDIRL---------------NYKTYC 287
Query: 541 CLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 600
LI GF K ID A QLF++M+R G+ D+ Y VLI KH + L+ E+K +
Sbjct: 288 VLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRS 347
Query: 601 CILLDDGI 608
I D GI
Sbjct: 348 GIPPDRGI 355
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 131/313 (41%), Gaps = 16/313 (5%)
Query: 293 VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLL 352
V +L C H + V+ +C G AL V E+ SR + D + +L+
Sbjct: 198 VEARLKEMRDCGFH-FDKFTLTPVLQVYCNTGKSERALSVFNEI-LSRGWLDEHISTILV 255
Query: 353 NAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQ 412
+FCK G V I+ +NY + +L +K ++ DK+ +++ M +
Sbjct: 256 VSFCKWGQVDKAFELIEMLEERDIR---LNYKTYCVLIHGFVKESRI-DKAFQLFEKMRR 311
Query: 413 NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 472
+ + + + ++ C+ AL+L + GI ++ +++ +ES
Sbjct: 312 MGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSR 371
Query: 473 ALE-LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI- 530
E ++ + K++V+ + Y +L GF + E + N E+ ++
Sbjct: 372 ITEVIIGDIDKKSVM---LLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLL 428
Query: 531 -----GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
LP+ + + +I+ K + +D+A L ++ + G+ P + Y +I K G
Sbjct: 429 KDHNKAILPDSDSLSIVINCLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEG 488
Query: 586 RIGEKNKLFGEMK 598
R E KL GEMK
Sbjct: 489 RSEESLKLLGEMK 501
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/399 (20%), Positives = 164/399 (41%), Gaps = 47/399 (11%)
Query: 235 LMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
+++ G + TY I++ G + + + G +T+ LC G
Sbjct: 385 MVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGK 444
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
++ A KLV ++ + ++ ++++ GF ++G + ++++ ++ P+V +N
Sbjct: 445 LEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNA 504
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNS- 409
+ A K+ K S ++ S++ + +++ + ++S
Sbjct: 505 GVEASLKR----PQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSS 560
Query: 410 --MLQNA-------------------IRPNTI---ICNHILRVHCREGQFREALTLLEDF 445
M Q A +P++ + N L ++ +G A L E F
Sbjct: 561 PYMDQLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIF 620
Query: 446 HEQGI-NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS 504
+ G+ +L Y+YN ++ K+ Y + A ++ +M + + Y+ +I G K
Sbjct: 621 NGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGK--- 677
Query: 505 NFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 564
++A A+ +++ G ++ Y LI+ K +D ATQLFD MK
Sbjct: 678 ---------MGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKS 728
Query: 565 KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM-KANCI 602
GI PDVV+Y +I K G++ E K M A C+
Sbjct: 729 NGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCL 767
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/439 (20%), Positives = 164/439 (37%), Gaps = 70/439 (15%)
Query: 172 HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXX 231
HS ++ + + +L + S K G+ L LL L
Sbjct: 90 HSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFESALGV 149
Query: 232 XXXLMETGPLPNIHTYT----IMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE 287
+ E G N Y ++ ++RLA IL K+ + N + G I
Sbjct: 150 LDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVIIVSYL 209
Query: 288 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFP-DVY 346
G V V N ++ G + +E V E++K + F D +
Sbjct: 210 PGTVAV--------------------NELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTW 249
Query: 347 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEV 406
SYN+ ++ F GD+ +L L K ++
Sbjct: 250 SYNICIHGFGCWGDLD---------------------AALSLF------------KEMKE 276
Query: 407 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 466
+S+ ++ P+ N ++ V C G+ ++AL + ++ G + +Y +I CK
Sbjct: 277 RSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCK 336
Query: 467 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQE 526
A+ + M +P + Y+ L+ G K R++ AC LF++
Sbjct: 337 SYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLK------------ARKVTEACQLFEK 384
Query: 527 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 586
M + G + +TY LIDG + + LF ++K+KG F D +T++++ + G+
Sbjct: 385 MVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGK 444
Query: 587 IGEKNKLFGEMKANCILLD 605
+ KL EM+ +D
Sbjct: 445 LEGAVKLVEEMETRGFSVD 463
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 103/256 (40%), Gaps = 42/256 (16%)
Query: 266 IYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGA 325
+Y S P + TY + I LC G A + +L H ++ + +I G C+
Sbjct: 280 VYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYR 339
Query: 326 VNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTS 385
+++A+ + EM+ + PD YN LL+ K V CQ+
Sbjct: 340 MDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKV---------TEACQL--------- 381
Query: 386 LILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 445
+ M+Q +R + N ++ R G+ TL D
Sbjct: 382 ---------------------FEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDL 420
Query: 446 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN 505
++G ++ +++ + +C+E + A++L+ M R +V S+L+ GF K Q
Sbjct: 421 KKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHK-QGR 479
Query: 506 FEMVERLFT--REMNV 519
++ E+L RE N+
Sbjct: 480 WDWKEKLMKHIREGNL 495
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 12/207 (5%)
Query: 405 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
++ + M+++ +PNT+ N ++ + R EA+ + E G ++ +Y +I +
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 465 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALF 524
K + +A+++ RM + P YS +I+ K + A LF
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK------------AGHLPAAHKLF 492
Query: 525 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 584
EM GC PNL TY ++D K A +L+ +M+ G PD VTY++++
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 552
Query: 585 GRIGEKNKLFGEMKANCILLDDGIKKL 611
G + E +F EM+ + D+ + L
Sbjct: 553 GYLEEAEAVFTEMQQKNWIPDEPVYGL 579
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 129/303 (42%), Gaps = 16/303 (5%)
Query: 277 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 336
TY T + L +KL+ ++ N+ +N +IH + + +NEA+ V +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 337 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 396
+ + PD +Y L++ K G + + P Y S+I+ C K
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY-SVIINCLGKAGH 484
Query: 397 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 456
K ++ M+ PN + N ++ +H + ++ AL L D G ++ +
Sbjct: 485 LPAAHK---LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRE 516
Y+ ++ ++ Y + A + M ++N +P Y L+ + K + VE+
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGN----VEK----- 592
Query: 517 MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTV 576
A +Q M G PN+ T L+ F +++ I A +L M G+ P + TYT+
Sbjct: 593 ---AWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTL 649
Query: 577 LIA 579
L++
Sbjct: 650 LLS 652
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 377 KPSIVNYTSLILLCKNKLKGQQLY-DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 435
+P+ V Y LI G+ Y ++++ V+N M + +P+ + ++ +H + G
Sbjct: 396 QPNTVTYNRLI-----HSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL 450
Query: 436 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 495
A+ + + G++ + ++Y+ II+ + K + A +L M+ + P +V Y+ +
Sbjct: 451 DIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIM 510
Query: 496 ISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLA 555
+ AK R A L+++M G P+ TY+ +++ Y++ A
Sbjct: 511 MDLHAK------------ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 556 TQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
+F EM++K PD Y +L+ + K G + + + + M
Sbjct: 559 EAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 91/222 (40%), Gaps = 4/222 (1%)
Query: 175 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 234
+ + LI + A L+ A ++ + GL + + ++ CL
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 235 LMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYR----SGGNPTVVTYGTYIRGLCECGY 290
+++ G PN+ TY IMM + K+YR +G P VTY + L CGY
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
++ A + ++ K + + ++ + + G V +A + + M + P+V + N
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 392
LL+ F + + ++PS+ YT L+ C +
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTD 656
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 141/323 (43%), Gaps = 41/323 (12%)
Query: 290 YVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 349
+V A K VR L + + F V+ F + + + VL+E + R D +S+
Sbjct: 121 HVVAAIKTVRGLSQRRQGSDDMRF--VMSSFVAKLSFRDMCVVLKEQRGWRQVRDFFSWM 178
Query: 350 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDK-SLEVYN 408
L ++ +PS+V YT ++ +L GQ K + E +
Sbjct: 179 KLQLSY---------------------RPSVVVYTIVL-----RLYGQVGKIKMAEETFL 212
Query: 409 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 468
ML+ P+ + C +L + R G+ LT + E+ I L+ YN ++ + K+S
Sbjct: 213 EMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKS 272
Query: 469 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMS 528
+ ++L M++ V P Y+ ++S +AK+ F E A F EM
Sbjct: 273 FHGKVIDLWLEMVEEGVPPNEFTYTLVVSSYAKQG---------FKEE---ALKAFGEMK 320
Query: 529 RIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIG 588
+G +P TY+ +I K + A L+++M+ +GI P T +++ Y+K
Sbjct: 321 SLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYP 380
Query: 589 EKNKLFGEMKANCILLDDGIKKL 611
+ LF +M+ N I D+ I+ L
Sbjct: 381 KALSLFADMERNKIPADEVIRGL 403
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 90/482 (18%), Positives = 189/482 (39%), Gaps = 53/482 (10%)
Query: 127 FRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFAS 186
R ++ +F ++ +L++ G+ + D F L SV+V+ ++++++
Sbjct: 142 MRFVMSSFVAKLSFRDMCVVLKEQRGWRQVRDFFSWMKLQLSY-RPSVVVYTIVLRLYGQ 200
Query: 187 NSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHT 246
++ A + F+ VG E +C +L + E L +
Sbjct: 201 VGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSV 260
Query: 247 YTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLH 306
Y M+S + GK+ +D+ ++V +
Sbjct: 261 YNFMLSSLQKK---SFHGKV------------------------IDLWLEMVEEGV---- 289
Query: 307 PLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXX 366
P N + V+ + ++G EAL+ EMKS P+ +Y+ +++ K GD
Sbjct: 290 PPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTYSSVISLSVKAGDWEKAIG 349
Query: 367 XXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHIL 426
I PS NYT +L + + Y K+L ++ M +N I + +I I+
Sbjct: 350 LYEDMRSQGIVPS--NYTCATML--SLYYKTENYPKALSLFADMERNKIPADEVIRGLII 405
Query: 427 RVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL 486
R++ + G F +A ++ E+ + ++ +Y + + AL+++ M R++
Sbjct: 406 RIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEMMKTRDIP 465
Query: 487 PGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACA--LFQEMSRIGCLPNLYTYTCLID 544
Y ++ +AK Q NV CA F+ +S+ G LP+ + +++
Sbjct: 466 LSRFAYIVMLQCYAKIQ--------------NVDCAEEAFRALSKTG-LPDASSCNDMLN 510
Query: 545 GFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILL 604
+ +++ + A ++ + D+ Y + Y K G + E L +M +
Sbjct: 511 LYTRLNLGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREARVK 570
Query: 605 DD 606
D+
Sbjct: 571 DN 572
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 140/358 (39%), Gaps = 55/358 (15%)
Query: 278 YGTYIRGLCECGYVDVAHKLVRK---------------LHCKLHPLNSHCFNAVIHGFCQ 322
Y T +R C+ G V A L+ K L +H +N H + + Q
Sbjct: 540 YKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFVQTLAESMHIVNKHDKHEAVLNVSQ 599
Query: 323 ---------------RGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 367
G +NE +L M +T + N ++++F ++GDV
Sbjct: 600 LDVMALGLMLNLRLKEGNLNETKAILNLM--FKTDLGSSAVNRVISSFVREGDVSKAEMI 657
Query: 368 XXXXXXCQIKPSIVNYTSLILLC--KNKLK-GQQLYDKSLEVYNSMLQNAIRPNTIICNH 424
++ +LI + ++KLK ++LY + E + P +
Sbjct: 658 ADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGE--------SKTPGKSVIRS 709
Query: 425 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 484
++ + R G +A L + E+G + + + +++ + + A + L++N
Sbjct: 710 MIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLEKN 769
Query: 485 VLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLID 544
+ V Y+TLI L ++ A +++ M G ++ TY +I
Sbjct: 770 IELDTVGYNTLIKAM------------LEAGKLQCASEIYERMHTSGVPCSIQTYNTMIS 817
Query: 545 GFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
+ + +D A ++F +R G++ D YT +I Y K G++ E LF EM+ I
Sbjct: 818 VYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGI 875
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/345 (21%), Positives = 137/345 (39%), Gaps = 20/345 (5%)
Query: 265 KIYRSGG---NPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 321
++Y + G P + I CG+++ A+ L + K + + +++
Sbjct: 691 RLYLAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALT 750
Query: 322 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 381
RG EA + D YN L+ A + G + + SI
Sbjct: 751 NRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQ 810
Query: 382 NYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 441
Y ++I + +G QL DK++E++++ ++ + + I +++ + + G+ EAL+L
Sbjct: 811 TYNTMISVYG---RGLQL-DKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSL 866
Query: 442 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 501
+ ++GI SYN ++ + EL+ M + + Y TLI +A
Sbjct: 867 FSEMQKKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYA- 925
Query: 502 EQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE 561
E S F E+ T L +E G + ++ L+ K ++ A + + +
Sbjct: 926 ESSQFAEAEKTIT--------LVKEK---GIPLSHSHFSSLLSALVKAGMMEEAERTYCK 974
Query: 562 MKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 606
M GI PD ++ Y G EK LF E + DD
Sbjct: 975 MSEAGISPDSACKRTILKGYMTCGD-AEKGILFYEKMIRSSVEDD 1018
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 119/298 (39%), Gaps = 16/298 (5%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
++I + + G + +A + E P + ++L+NA +G
Sbjct: 707 IRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCL 766
Query: 373 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 432
I+ V Y +LI K L+ +L S E+Y M + + + N ++ V+ R
Sbjct: 767 EKNIELDTVGYNTLI---KAMLEAGKLQCAS-EIYERMHTSGVPCSIQTYNTMISVYGRG 822
Query: 433 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 492
Q +A+ + + G+ L++ Y +I K AL L M K+ + PG +Y
Sbjct: 823 LQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSY 882
Query: 493 STLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 552
+ ++ A + + E+ E L Q M R G +L TY LI + +
Sbjct: 883 NMMVKICATSRLHHEVDE------------LLQAMERNGRCTDLSTYLTLIQVYAESSQF 930
Query: 553 DLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGIKK 610
A + +K KGI ++ L++ K G + E + + +M I D K+
Sbjct: 931 AEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKR 988
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 12/207 (5%)
Query: 405 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
++ + M+++ +PNT+ N ++ + R EA+ + E G ++ +Y +I +
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 465 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALF 524
K + +A+++ RM + P YS +I+ K + A LF
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK------------AGHLPAAHKLF 492
Query: 525 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 584
EM GC PNL TY ++D K A +L+ +M+ G PD VTY++++
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 552
Query: 585 GRIGEKNKLFGEMKANCILLDDGIKKL 611
G + E +F EM+ + D+ + L
Sbjct: 553 GYLEEAEAVFTEMQQKNWIPDEPVYGL 579
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 129/303 (42%), Gaps = 16/303 (5%)
Query: 277 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 336
TY T + L +KL+ ++ N+ +N +IH + + +NEA+ V +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 337 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 396
+ + PD +Y L++ K G + + P Y S+I+ C K
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY-SVIINCLGKAGH 484
Query: 397 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 456
K ++ M+ PN + N ++ +H + ++ AL L D G ++ +
Sbjct: 485 LPAAHK---LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRE 516
Y+ ++ ++ Y + A + M ++N +P Y L+ + K + VE+
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGN----VEK----- 592
Query: 517 MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTV 576
A +Q M G PN+ T L+ F +++ I A +L M G+ P + TYT+
Sbjct: 593 ---AWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTL 649
Query: 577 LIA 579
L++
Sbjct: 650 LLS 652
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 377 KPSIVNYTSLILLCKNKLKGQQLY-DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 435
+P+ V Y LI G+ Y ++++ V+N M + +P+ + ++ +H + G
Sbjct: 396 QPNTVTYNRLI-----HSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL 450
Query: 436 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 495
A+ + + G++ + ++Y+ II+ + K + A +L M+ + P +V Y+ +
Sbjct: 451 DIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIM 510
Query: 496 ISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLA 555
+ AK R A L+++M G P+ TY+ +++ Y++ A
Sbjct: 511 MDLHAK------------ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 556 TQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
+F EM++K PD Y +L+ + K G + + + + M
Sbjct: 559 EAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 91/222 (40%), Gaps = 4/222 (1%)
Query: 175 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 234
+ + LI + A L+ A ++ + GL + + ++ CL
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 235 LMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYR----SGGNPTVVTYGTYIRGLCECGY 290
+++ G PN+ TY IMM + K+YR +G P VTY + L CGY
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
++ A + ++ K + + ++ + + G V +A + + M + P+V + N
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 392
LL+ F + + ++PS+ YT L+ C +
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTD 656
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 94/207 (45%), Gaps = 12/207 (5%)
Query: 405 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
++ + M+++ +PNT+ N ++ + R EA+ + E G ++ +Y +I +
Sbjct: 385 KLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIH 444
Query: 465 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALF 524
K + +A+++ RM + P YS +I+ K + A LF
Sbjct: 445 AKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGK------------AGHLPAAHKLF 492
Query: 525 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 584
EM GC PNL TY ++D K A +L+ +M+ G PD VTY++++
Sbjct: 493 CEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHC 552
Query: 585 GRIGEKNKLFGEMKANCILLDDGIKKL 611
G + E +F EM+ + D+ + L
Sbjct: 553 GYLEEAEAVFTEMQQKNWIPDEPVYGL 579
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 129/303 (42%), Gaps = 16/303 (5%)
Query: 277 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 336
TY T + L +KL+ ++ N+ +N +IH + + +NEA+ V +M
Sbjct: 366 TYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQM 425
Query: 337 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 396
+ + PD +Y L++ K G + + P Y S+I+ C K
Sbjct: 426 QEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTY-SVIINCLGKAGH 484
Query: 397 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 456
K ++ M+ PN + N ++ +H + ++ AL L D G ++ +
Sbjct: 485 LPAAHK---LFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVT 541
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRE 516
Y+ ++ ++ Y + A + M ++N +P Y L+ + K + VE+
Sbjct: 542 YSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGN----VEK----- 592
Query: 517 MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTV 576
A +Q M G PN+ T L+ F +++ I A +L M G+ P + TYT+
Sbjct: 593 ---AWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTL 649
Query: 577 LIA 579
L++
Sbjct: 650 LLS 652
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 377 KPSIVNYTSLILLCKNKLKGQQLY-DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 435
+P+ V Y LI G+ Y ++++ V+N M + +P+ + ++ +H + G
Sbjct: 396 QPNTVTYNRLI-----HSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFL 450
Query: 436 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 495
A+ + + G++ + ++Y+ II+ + K + A +L M+ + P +V Y+ +
Sbjct: 451 DIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIM 510
Query: 496 ISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLA 555
+ AK R A L+++M G P+ TY+ +++ Y++ A
Sbjct: 511 MDLHAK------------ARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEA 558
Query: 556 TQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
+F EM++K PD Y +L+ + K G + + + + M
Sbjct: 559 EAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAM 600
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 91/222 (40%), Gaps = 4/222 (1%)
Query: 175 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 234
+ + LI + A L+ A ++ + GL + + ++ CL
Sbjct: 435 VTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCE 494
Query: 235 LMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYR----SGGNPTVVTYGTYIRGLCECGY 290
+++ G PN+ TY IMM + K+YR +G P VTY + L CGY
Sbjct: 495 MVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGY 554
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
++ A + ++ K + + ++ + + G V +A + + M + P+V + N
Sbjct: 555 LEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNS 614
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 392
LL+ F + + ++PS+ YT L+ C +
Sbjct: 615 LLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLSCCTD 656
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 96/207 (46%), Gaps = 12/207 (5%)
Query: 405 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
++ + M+++ +PNT+ N ++ + R +EA+ + E G ++ +Y +I +
Sbjct: 380 KLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIH 439
Query: 465 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALF 524
K + +A+++ RM + + P YS +I+ K + A LF
Sbjct: 440 AKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGK------------AGHLPAAHRLF 487
Query: 525 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 584
EM GC PNL T+ +I K + A +L+ +M+ G PD VTY++++
Sbjct: 488 CEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHC 547
Query: 585 GRIGEKNKLFGEMKANCILLDDGIKKL 611
G + E +F EM+ + D+ + L
Sbjct: 548 GFLEEAEGVFAEMQRKNWVPDEPVYGL 574
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 102/222 (45%), Gaps = 18/222 (8%)
Query: 377 KPSIVNYTSLILLCKNKLKGQQLYDK-SLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 435
KP+ V Y LI G+ Y K ++ V+N M + P+ + ++ +H + G
Sbjct: 391 KPNTVTYNRLI-----HSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFL 445
Query: 436 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTL 495
A+ + + E G++ + ++Y+ II+ + K + A L M+ + P +V ++ +
Sbjct: 446 DIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIM 505
Query: 496 ISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLA 555
I+ AK R A L+++M G P+ TY+ +++ +++ A
Sbjct: 506 IALHAK------------ARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEA 553
Query: 556 TQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
+F EM+RK PD Y +L+ + K G + + + + M
Sbjct: 554 EGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAM 595
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/303 (20%), Positives = 124/303 (40%), Gaps = 16/303 (5%)
Query: 277 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 336
TY T + L +KL+ ++ N+ +N +IH + + + EA+ V +M
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQM 420
Query: 337 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 396
+ + PD +Y L++ K G + + P Y+ +I N L
Sbjct: 421 QEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII----NCLGK 476
Query: 397 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 456
+ ++ M+ PN + N ++ +H + + AL L D G ++ +
Sbjct: 477 AGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVT 536
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRE 516
Y+ ++ ++ + + A + M ++N +P Y L+ + K +
Sbjct: 537 YSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGN------------ 584
Query: 517 MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTV 576
++ A +Q M + G PN+ T L+ F ++ + A L M G+ P + TYT+
Sbjct: 585 VDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTL 644
Query: 577 LIA 579
L++
Sbjct: 645 LLS 647
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 12/168 (7%)
Query: 431 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 490
R QF E LL++ G N +YN +IH + +Y K A+ + +M + P V
Sbjct: 371 RAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRV 430
Query: 491 NYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 550
Y TLI AK + F +++A ++Q M G P+ +TY+ +I+ K
Sbjct: 431 TYCTLIDIHAK--AGF----------LDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAG 478
Query: 551 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
++ A +LF EM +G P++VT+ ++IA + K KL+ +M+
Sbjct: 479 HLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQ 526
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 91/222 (40%), Gaps = 4/222 (1%)
Query: 175 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 234
+ + LI + A L+ A ++ + GL + + ++ CL
Sbjct: 430 VTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCE 489
Query: 235 LMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYR----SGGNPTVVTYGTYIRGLCECGY 290
++ G PN+ T+ IM++ E K+YR +G P VTY + L CG+
Sbjct: 490 MVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGF 549
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
++ A + ++ K + + ++ + + G V++A + + M + P+V + N
Sbjct: 550 LEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNS 609
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 392
LL+ F + + + PS+ YT L+ C +
Sbjct: 610 LLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLSCCTD 651
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/312 (21%), Positives = 131/312 (41%), Gaps = 16/312 (5%)
Query: 269 SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 328
S G+ + Y I+ L + ++VA +K +++ +N ++ F +G +
Sbjct: 237 SHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYK 296
Query: 329 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL 388
A E+ E M+ + + D +Y +++ + K G + +++PS ++SL+
Sbjct: 297 AFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLV- 355
Query: 389 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 448
+ + D S++VY M RP+ + ++ + + G+ AL L ++ +
Sbjct: 356 ---DSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKS 412
Query: 449 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEM 508
G N Y II K ++A+ + M K LP YS L+ A
Sbjct: 413 GFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAG------- 465
Query: 509 VERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIF 568
+ +++ A ++ M+ G P L +Y L+ +D+A ++ EMK G
Sbjct: 466 -----SGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYS 520
Query: 569 PDVVTYTVLIAW 580
DV VL+ +
Sbjct: 521 VDVCASDVLMIY 532
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 83/186 (44%), Gaps = 12/186 (6%)
Query: 418 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
+T N+++ + +G +A + E + L+ +Y II + K A +L
Sbjct: 277 DTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLF 336
Query: 478 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLY 537
+M +R + P +S+L+ K ++ + ++ EM G P+
Sbjct: 337 QQMKERKLRPSFSVFSSLVDSMGK------------AGRLDTSMKVYMEMQGFGHRPSAT 384
Query: 538 TYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
+ LID + K +D A +L+DEMK+ G P+ YT++I + K G++ +F +M
Sbjct: 385 MFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDM 444
Query: 598 KANCIL 603
+ L
Sbjct: 445 EKAGFL 450
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 113/278 (40%), Gaps = 16/278 (5%)
Query: 148 RDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNV---LIKVFASNSMLEHAHQVFVSAKNVG 204
RD VG FE+ + D H L FN +I+ A LE A F A+ G
Sbjct: 219 RDFVG---IQSLFEEM--VQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESG 273
Query: 205 LELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMM----SCGDIRLAA 260
++ ++ N L+ + +T L + TY +++ G + A
Sbjct: 274 CKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAF 333
Query: 261 EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 320
++ ++ P+ + + + + + G +D + K+ ++ H ++ F ++I +
Sbjct: 334 KLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSY 393
Query: 321 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 380
+ G ++ AL + +EMK S P+ Y M++ + K G + P+
Sbjct: 394 AKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTP 453
Query: 381 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 418
Y+ L+ + G D ++++YNSM +RP
Sbjct: 454 STYSCLLEMH----AGSGQVDSAMKIYNSMTNAGLRPG 487
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/315 (21%), Positives = 126/315 (40%), Gaps = 28/315 (8%)
Query: 291 VDVAHKLVRKLHCKLHPL---NSHCFNAVIHGFCQRGAVNEALEVLEEM-KSSRTFPDVY 346
VD A L R K P + C+ + G Q + EEM + S + D+
Sbjct: 185 VDAALSLFR--WAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLS 242
Query: 347 --SYNMLLNAFCK--KGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDK 402
+YN ++ K K +V C+I Y +L++L NK L K
Sbjct: 243 FNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQ--TYNNLMMLFLNK----GLPYK 296
Query: 403 SLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIH 462
+ E+Y SM + + I+ + G+ A L + E+ + + ++ ++
Sbjct: 297 AFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVD 356
Query: 463 MICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACA 522
+ K ++++ M P + +LI +AK +++ A
Sbjct: 357 SMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAK------------AGKLDTALR 404
Query: 523 LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYH 582
L+ EM + G PN YT +I+ K +++A +F +M++ G P TY+ L+ +
Sbjct: 405 LWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHA 464
Query: 583 KHGRIGEKNKLFGEM 597
G++ K++ M
Sbjct: 465 GSGQVDSAMKIYNSM 479
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/329 (20%), Positives = 146/329 (44%), Gaps = 12/329 (3%)
Query: 168 DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXX 227
++ +V+ +NV+IK + + E A ++F S + G+ + N L++ L
Sbjct: 499 EVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHK 558
Query: 228 XXXXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIR 283
+ ETG + + Y ++S G + +A E+ ++ P VV YG I
Sbjct: 559 GRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLIN 618
Query: 284 GLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSS---R 340
+ G V A V + P NS +N++I + + G ++EA + ++ S
Sbjct: 619 AFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKT 678
Query: 341 TFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLY 400
+PDVY+ N ++N + ++ V + + +T ++LC K G+ +
Sbjct: 679 QYPDVYTSNCMINLYSERSMVRKAEAIFDSM---KQRGEANEFTFAMMLCMYKKNGR--F 733
Query: 401 DKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 460
+++ ++ M + I + + N +L + +G+F+EA+ ++ GI + ++ +
Sbjct: 734 EEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSL 793
Query: 461 IHMICKESYPKMALELMPRMLKRNVLPGV 489
++ K K A+ + + K+ + G+
Sbjct: 794 GTILMKLGMSKKAVRKIEEIRKKEIKRGL 822
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/492 (21%), Positives = 194/492 (39%), Gaps = 52/492 (10%)
Query: 127 FRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFAS 186
F +IH + G EV +L++ + +C D +N+LI +
Sbjct: 336 FNTMIHIYGNNGQLGEVTSLMKTMKLHCAPD----------------TRTYNILISLHTK 379
Query: 187 NSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHT 246
N+ +E A F K+ GL+ S LL + + + +T
Sbjct: 380 NNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYT 439
Query: 247 YTIMMSCGDIRLAAEILGKIYR------SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRK 300
+ + + + AE+L K + GN + Y I E GY+ A ++
Sbjct: 440 QSALTR---MYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVF-- 494
Query: 301 LHCKLHPLNSHC---FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 357
+ C+ +N +N +I + + +A E+ E M S PD +YN L+
Sbjct: 495 ICCQ--EVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILAS 552
Query: 358 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 417
+ Y ++I + +K QL + + EVY M++ I P
Sbjct: 553 ADMPHKGRCYLEKMRETGYVSDCIPYCAVI---SSFVKLGQL-NMAEEVYKEMVEYNIEP 608
Query: 418 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
+ ++ ++ G ++A++ +E E GI N YN +I + K Y A +
Sbjct: 609 DVVVYGVLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIY 668
Query: 478 PRMLK---RNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLP 534
++L+ + P V + +I+ ++ ER R+ A A+F M + G
Sbjct: 669 RKLLQSCNKTQYPDVYTSNCMINLYS---------ERSMVRK---AEAIFDSMKQRG-EA 715
Query: 535 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
N +T+ ++ + K + ATQ+ +M+ I D ++Y ++ + GR E + F
Sbjct: 716 NEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVETF 775
Query: 595 GEMKANCILLDD 606
EM ++ I DD
Sbjct: 776 KEMVSSGIQPDD 787
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 142/335 (42%), Gaps = 39/335 (11%)
Query: 244 IHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHC 303
I Y I SC A E+ + G P TY T ++ L D+ HK C
Sbjct: 512 IKAYGISKSC---EKACELFESMMSYGVTPDKCTYNTLVQILAS---ADMPHKG----RC 561
Query: 304 KLHPLN-----SHC--FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 356
L + S C + AVI F + G +N A EV +EM PDV Y +L+NAF
Sbjct: 562 YLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFA 621
Query: 357 KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLY-DKSLEVYNSMLQNAI 415
G+V I + V Y SLI KL + Y D++ +Y +LQ+
Sbjct: 622 DTGNVQQAMSYVEAMKEAGIPGNSVIYNSLI-----KLYTKVGYLDEAEAIYRKLLQSCN 676
Query: 416 R---PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 472
+ P+ N ++ ++ R+A + + ++G N++++ ++ M K +
Sbjct: 677 KTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEE 735
Query: 473 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGC 532
A ++ +M + +L ++Y++++ FA + E VE F+EM G
Sbjct: 736 ATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKEAVE------------TFKEMVSSGI 783
Query: 533 LPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 567
P+ T+ L K+ A + +E+++K I
Sbjct: 784 QPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEI 818
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 26/286 (9%)
Query: 329 ALEVLEEMKSSRTFP-DVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI 387
A+E+ E KS + +V YN++L K IKP Y +LI
Sbjct: 170 AVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLI 229
Query: 388 -LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLL---- 442
+ K LK +L M + ++P+ + +L+++ + +F++A
Sbjct: 230 DVYSKGGLKVH-----ALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWS 284
Query: 443 --EDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 500
E+ + + L+ Y+YN +I K K A E RML+ ++P V ++T+I +
Sbjct: 285 CDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYG 344
Query: 501 KEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 560
+N ++ E +L + M ++ C P+ TY LI K + I+ A F
Sbjct: 345 ---NNGQLGE---------VTSLMKTM-KLHCAPDTRTYNILISLHTKNNDIERAGAYFK 391
Query: 561 EMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 606
EMK G+ PD V+Y L+ + + E L EM + + +D+
Sbjct: 392 EMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDE 437
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 97/209 (46%), Gaps = 7/209 (3%)
Query: 394 LKGQQLYDKSLEVYNSMLQNA-IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 452
LK Q +++++E++ N I N +LR+ + ++R +L ++ +GI
Sbjct: 161 LKEQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKP 220
Query: 453 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 512
+Y +I + K AL + +M K + P V ++ + K + F+ E
Sbjct: 221 INSTYGTLIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAR-EFQKAEEF 279
Query: 513 FTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
F + +C + S + CL + YTY +ID + K I A++ F M +GI P V
Sbjct: 280 FKK---WSCDENKADSHV-CLSS-YTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTV 334
Query: 573 TYTVLIAWYHKHGRIGEKNKLFGEMKANC 601
T+ +I Y +G++GE L MK +C
Sbjct: 335 TFNTMIHIYGNNGQLGEVTSLMKTMKLHC 363
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/456 (18%), Positives = 167/456 (36%), Gaps = 71/456 (15%)
Query: 191 EHAHQVFVSAKNVG-LELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTI 249
E A ++F K+ G EL++ N +L+ L ++ G P TY
Sbjct: 168 ERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGT 227
Query: 250 MM---SCGDIRLAAE-ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKL 305
++ S G +++ A LGK+ + G P VT G ++ + A + +K C
Sbjct: 228 LIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDE 287
Query: 306 HPLNSH-----------------------------------------CFNAVIHGFCQRG 324
+ +SH FN +IH + G
Sbjct: 288 NKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNG 347
Query: 325 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYT 384
+ E +++ MK PD +YN+L++ K D+ +KP V+Y
Sbjct: 348 QLGEVTSLMKTMK-LHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYR 406
Query: 385 SLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 444
+L+ + + +++ + M + + + + + R++ ++ + +
Sbjct: 407 TLLYA----FSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKR 462
Query: 445 FHEQGINLNQYSYNEIIHMICKESYPKMALELM---PRMLKRNVLPGVVNYSTLISGFAK 501
FH G N++ Y+ I + Y A + + KR V+ Y+ +I +
Sbjct: 463 FHVAG-NMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRT----VIEYNVMIKAYG- 516
Query: 502 EQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE 561
++ AC LF+ M G P+ TY L+ D ++
Sbjct: 517 -----------ISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEK 565
Query: 562 MKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
M+ G D + Y +I+ + K G++ +++ EM
Sbjct: 566 MRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEM 601
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/176 (32%), Positives = 86/176 (48%), Gaps = 13/176 (7%)
Query: 412 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 471
+N + +I C +++ EG +EAL E + Y+YN II+ +C+ K
Sbjct: 160 KNVVTTASITC--LMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFK 217
Query: 472 MALELMPRMLKRNVLPG------VVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQ 525
A L+ +M LPG Y+ LIS + + + R M A +F+
Sbjct: 218 KARFLLDQMQ----LPGFRYPPDTYTYTILISSYCRYGMQ-TGCRKAIRRRMWEANRMFR 272
Query: 526 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWY 581
EM G +P++ TY CLIDG CK + I A +LF++MK KG P+ VTY I +Y
Sbjct: 273 EMLFRGFVPDVVTYNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYY 328
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 107/256 (41%), Gaps = 29/256 (11%)
Query: 322 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 381
+ G V EAL MK PDVY+YN ++NA C+ G+ +
Sbjct: 177 EEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPD 236
Query: 382 NYTSLILL-----------CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 430
YT IL+ C+ ++ +++++ + ++ ML P+ + N ++ C
Sbjct: 237 TYTYTILISSYCRYGMQTGCRKAIR-RRMWEAN-RMFREMLFRGFVPDVVTYNCLIDGCC 294
Query: 431 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLK-RNVLPGV 489
+ + AL L ED +G NQ +YN I + + A+E+M M K + +PG
Sbjct: 295 KTNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGS 354
Query: 490 VNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKI 549
Y+ LI + TR A L EM G +P YTY + D +
Sbjct: 355 STYTPLIHALVE------------TRRAAEARDLVVEMVEAGLVPREYTYKLVCDA---L 399
Query: 550 DYIDLATQLFDEMKRK 565
LA+ L +E+ ++
Sbjct: 400 SSEGLASTLDEELHKR 415
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 95/229 (41%), Gaps = 27/229 (11%)
Query: 384 TSLILLCKNKLKGQQLYDK-SLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLL 442
T+ + C K G++ + K +L + M + +P+ N I+ CR G F++A LL
Sbjct: 164 TTASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLL 223
Query: 443 EDFHEQGINL--NQYSYNEIIHMICKESYPKMALELMPR-----------MLKRNVLPGV 489
+ G + Y+Y +I C+ + + R ML R +P V
Sbjct: 224 DQMQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDV 283
Query: 490 VNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKI 549
V Y+ LI G K T + A LF++M GC+PN TY I +
Sbjct: 284 VTYNCLIDGCCK------------TNRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVT 331
Query: 550 DYIDLATQLFDEMKRKG-IFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
+ I+ A ++ MK+ G P TYT LI + R E L EM
Sbjct: 332 NEIEGAIEMMRTMKKLGHGVPGSSTYTPLIHALVETRRAAEARDLVVEM 380
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 148/406 (36%), Gaps = 91/406 (22%)
Query: 170 PHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXX 229
P V+++NV +KVF + LE + ++F
Sbjct: 171 PSREVILYNVTMKVFRKSKDLEKSEKLF-------------------------------- 198
Query: 230 XXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGL 285
++E G P+ T+T ++SC G + A E K+ G P VT I
Sbjct: 199 ---DEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAY 255
Query: 286 CECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDV 345
G VD+A L + + +++ F+ +I + G + L + EEMK+ P++
Sbjct: 256 GRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNL 315
Query: 346 YSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLE 405
YN L+++ + ++ + +
Sbjct: 316 VIYNRLIDSMGR--------------------------------------AKRPWQAKI- 336
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
+Y ++ N PN ++R + R +AL + + E+G++L YN ++ M
Sbjct: 337 IYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCA 396
Query: 466 KESYPKMALELMPRMLK-RNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALF 524
Y A E+ M P +S+LI+ +A R AL
Sbjct: 397 DNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYA-----------CSGRVSEAEAALL 445
Query: 525 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPD 570
Q M G P L+ T +I + K +D + FD++ GI PD
Sbjct: 446 Q-MREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 114/274 (41%), Gaps = 20/274 (7%)
Query: 332 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 391
+LE MK SR +V YN+ + F K D+ IKP +T++I +
Sbjct: 165 LLETMKPSR---EVILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCAR 221
Query: 392 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 451
+ +++E + M P+ + ++ + R G AL+L + +
Sbjct: 222 Q----NGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWR 277
Query: 452 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVER 511
++ +++ +I + L + M V P +V Y+ LI + + ++
Sbjct: 278 IDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQ---- 333
Query: 512 LFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 571
A +++++ G PN TY L+ + + Y D A ++ EMK KG+ V
Sbjct: 334 --------AKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTV 385
Query: 572 VTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
+ Y L++ + + E ++F +MK NC D
Sbjct: 386 ILYNTLLSMCADNRYVDEAFEIFQDMK-NCETCD 418
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 111/299 (37%), Gaps = 53/299 (17%)
Query: 301 LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGD 360
L + P N+ F +I Q G A+E E+M S PD + +++A+ + G+
Sbjct: 202 LERGIKPDNA-TFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGN 260
Query: 361 VXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTI 420
V D +L +Y+ R + +
Sbjct: 261 V---------------------------------------DMALSLYDRARTEKWRIDAV 281
Query: 421 ICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRM 480
+ ++R++ G + L + E+ G+ N YN +I + + P A + +
Sbjct: 282 TFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDL 341
Query: 481 LKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYT 540
+ P Y+ L+ + + R + A A+++EM G + Y
Sbjct: 342 ITNGFTPNWSTYAALVRAYGR------------ARYGDDALAIYREMKEKGLSLTVILYN 389
Query: 541 CLIDGFCKIDYIDLATQLFDEMKR-KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
L+ Y+D A ++F +MK + PD T++ LI Y GR+ E +M+
Sbjct: 390 TLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMR 448
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 151/357 (42%), Gaps = 47/357 (13%)
Query: 273 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 332
P V Y I L +C + AH+L +++ + +N + A++ + + G + A +
Sbjct: 148 PNVGIYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSRSGRFDAAFTL 207
Query: 333 LEEMKSSRT-FPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 391
LE MKSS PDV++Y++L+ +F + I+P+ + Y +LI
Sbjct: 208 LERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLI---- 263
Query: 392 NKLKGQQLYDKS---LEVYNSMLQ----NAIRPNTIICNHILRVHCREGQFREALTLLED 444
Y K+ +E+ ++++Q + +P++ N LR GQ E
Sbjct: 264 ------DAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEK 317
Query: 445 FHEQGINLNQYSYNEIIHMICKE-SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ 503
F GI N ++N ++ K +Y KM+ +M M K + +V Y+ +I F +
Sbjct: 318 FQSSGIEPNIRTFNILLDSYGKSGNYKKMSA-VMEYMQKYHYSWTIVTYNVVIDAFGR-A 375
Query: 504 SNFEMVERLFTREMN---------VACALFQEMSRI-------GCLP---------NLYT 538
+ + +E LF R M C+L + R G L +L
Sbjct: 376 GDLKQMEYLF-RLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVF 434
Query: 539 YTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFG 595
+ CL+D + +++ + + M++KG PD +TY ++ Y G +L G
Sbjct: 435 FNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGMTTHVKELHG 491
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 20/149 (13%)
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRE 516
Y ++I M+ K P+ A EL M+ + Y+ L+S +++ +
Sbjct: 153 YVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAYSR------------SGR 200
Query: 517 MNVACALFQEM-SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYT 575
+ A L + M S C P+++TY+ LI F ++ D L +M+R+GI P+ +TY
Sbjct: 201 FDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYN 260
Query: 576 VLIAWYHKHGRIGEKNKLFGEMKANCILL 604
LI Y K K+F EM++ I +
Sbjct: 261 TLIDAYGKA-------KMFVEMESTLIQM 282
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/267 (20%), Positives = 113/267 (42%), Gaps = 17/267 (6%)
Query: 242 PNIHTYTIMMSCGDIRLA----AEILGKIYRSGGNPTVVTYGTYIRGLCECG-YVDVAHK 296
P++HTY+I++ A ++L + R G P +TY T I + +V++
Sbjct: 219 PDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMEST 278
Query: 297 LVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 356
L++ L +S N+ + F G + E+ +SS P++ ++N+LL+++
Sbjct: 279 LIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYG 338
Query: 357 KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA-I 415
K G+ +IV Y +I G+ K +E ++Q+ I
Sbjct: 339 KSGNYKKMSAVMEYMQKYHYSWTIVTYNVVI-----DAFGRAGDLKQMEYLFRLMQSERI 393
Query: 416 RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK-ESYPKM-- 472
P+ + ++R + R + + +L I L+ +N ++ + E + +M
Sbjct: 394 FPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKG 453
Query: 473 ALELMPRMLKRNVLPGVVNYSTLISGF 499
LELM K+ P + Y T++ +
Sbjct: 454 VLELME---KKGFKPDKITYRTMVKAY 477
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/488 (19%), Positives = 186/488 (38%), Gaps = 60/488 (12%)
Query: 117 THGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLD---LPHHS 173
T H + + + IH A + ++ AL+ + D +LLD + +
Sbjct: 106 TRNLRHGIKSYALTIHILVKARLLIDARALIESSLLNSPPDSDL--VDSLLDTYEISSST 163
Query: 174 VLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXX 233
LVF++L++ +A LE VF + G L + + N L+
Sbjct: 164 PLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYE 223
Query: 234 XLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECG 289
++ PN T IM+ G ++ ++L +I P+V+ + + + E
Sbjct: 224 CAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEM 283
Query: 290 YVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 349
++ + L+++L K +++ ++ V++ + G + A +V +EM + + Y
Sbjct: 284 RIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYT 343
Query: 350 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNS 409
+ + C+KGDV LL + + G YD E +N
Sbjct: 344 VFVRVCCEKGDVKEAER---------------------LLSEMEESGVSPYD---ETFNC 379
Query: 410 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 469
++ R G + L E +G+ + ++NE++ + K
Sbjct: 380 LIGG---------------FARFGWEEKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIEN 424
Query: 470 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSR 529
A E++ + + + +P YS LI GF + +++ A LF EM
Sbjct: 425 VNRANEILTKSIDKGFVPDEHTYSHLIRGFIE------------GNDIDQALKLFYEMEY 472
Query: 530 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 589
P + LI G C ++ + MK++ I P+ Y LI + K G
Sbjct: 473 RKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQKIGDKTN 532
Query: 590 KNKLFGEM 597
++++ EM
Sbjct: 533 ADRVYNEM 540
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/348 (20%), Positives = 149/348 (42%), Gaps = 18/348 (5%)
Query: 256 IRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVR-KLHCKLHPLNSHCFN 314
+ L ++ ++ G +V+T T I + D+ ++ + +++P N
Sbjct: 180 LELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAIDKRIYP-NEITIR 238
Query: 315 AVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXC 374
+I C+ G + E +++L+ + R P V L+ ++ +
Sbjct: 239 IMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSLLKRLLMK 298
Query: 375 QIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQ 434
+ + Y S+++ K K +G + + +V++ MLQ N+ + +RV C +G
Sbjct: 299 NMVVDTIGY-SIVVYAKAK-EGDLV--SARKVFDEMLQRGFSANSFVYTVFVRVCCEKGD 354
Query: 435 FREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYST 494
+EA LL + E G++ ++N +I + + + LE M+ R ++P ++
Sbjct: 355 VKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGLMPSCSAFNE 414
Query: 495 LISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDL 554
++ +K + N + T+ ++ G +P+ +TY+ LI GF + + ID
Sbjct: 415 MVKSVSKIE-NVNRANEILTKSIDK-----------GFVPDEHTYSHLIRGFIEGNDIDQ 462
Query: 555 ATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
A +LF EM+ + + P + LI G++ K MK I
Sbjct: 463 ALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLI 510
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 120/297 (40%), Gaps = 54/297 (18%)
Query: 120 FSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLL------------ 167
+ + + + ++I+ F A M+ E+ ++R I +C S E F L+
Sbjct: 91 YQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINR 150
Query: 168 ------DLPHH----SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLK 217
+P S FN ++ + S + + H++FVSA +G+E+ N L+K
Sbjct: 151 AIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIK 210
Query: 218 CLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVT 277
L G++ A ++L + + P V+T
Sbjct: 211 GLC-------------------------------ESGNLEAALQLLDEFPQQKSRPNVMT 239
Query: 278 YGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMK 337
+ IRG C G + A KL+ ++ + ++ FN +I G ++G V E +++LE MK
Sbjct: 240 FSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMK 299
Query: 338 SSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNK 393
P+ +Y +L K ++PS ++Y ++L LC+ K
Sbjct: 300 VKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETK 356
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/316 (20%), Positives = 126/316 (39%), Gaps = 24/316 (7%)
Query: 268 RSGGNPTVVTYGTYIRGLCECGYVDVAHKLVR--KLHCKLHPLNSHCFNAV-IHGFCQRG 324
R PT Y I + D +++R KL + +N + I+G G
Sbjct: 88 RKDYQPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLA-G 146
Query: 325 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAF--CKKGDVXXXXXXXXXXXXCQIKPSIVN 382
+N A+E+L M +P S+N +LN K D +I +N
Sbjct: 147 RINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLN 206
Query: 383 YTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLL 442
+L K + L + +L++ + Q RPN + + ++R C +G+F EA LL
Sbjct: 207 -----ILIKGLCESGNL-EAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLL 260
Query: 443 EDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKE 502
E ++ I + ++N +I + K+ + ++L+ RM + P Y ++ G +
Sbjct: 261 ERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDK 320
Query: 503 QSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEM 562
+ N E E + +M G P+ +Y ++ G C+ + + +M
Sbjct: 321 KRNLEAKE------------MMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQM 368
Query: 563 KRKGIFPDVVTYTVLI 578
G P + + ++
Sbjct: 369 VNHGFVPKTLMWWKVV 384
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 36/227 (15%)
Query: 385 SLILLCKNKLKGQQLYDKSLEVYNSM-LQNAIRPNTIICNHILRVHCR-EGQFREALTLL 442
SL L NK ++YD+ EV ++ L+ R + +++R++ G+ A+ +L
Sbjct: 96 SLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEIL 155
Query: 443 EDFHEQGINLNQYSYNEIIHMICKE-----------SYPKMALELMPRMLKRNVLPGVVN 491
+ G + S+N I++++ S PK+ +E+
Sbjct: 156 FGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEI-----------DACC 204
Query: 492 YSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 551
+ LI G E N E A L E + PN+ T++ LI GFC
Sbjct: 205 LNILIKGLC-ESGNLE-----------AALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGK 252
Query: 552 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
+ A +L + M+++ I PD +T+ +LI+ K GR+ E L MK
Sbjct: 253 FEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMK 299
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 137/350 (39%), Gaps = 26/350 (7%)
Query: 254 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 313
G + A ++ K G P TY + LC+ ++D A + K+
Sbjct: 245 GKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQM 304
Query: 314 NAVIHGFCQRGAVNEALEVLEEMKS-SRTFPDVYSYNMLLNAFCK-KGDVXXXXXXXXXX 371
+I FC+ G EA V E K+ ++ P + L+ A CK G +
Sbjct: 305 GNIITWFCKEGKAEEAYSVYELAKTKEKSLPPRF-VATLITALCKNDGTITFAQEMLGDL 363
Query: 372 XXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 430
+ I ++ +I LC+ + + D + + M+ P + N ++
Sbjct: 364 SGEARRRGIKPFSDVIHSLCRMR----NVKDAKALLLD-MISKGPAPGNAVFNLVVHACS 418
Query: 431 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 490
+ G EA +L+ +G+ + Y+Y II K A E++ K++ V
Sbjct: 419 KTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPV 478
Query: 491 NYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC--K 548
Y LI G+ K E + A L EM R G PN Y LI FC
Sbjct: 479 TYHALIRGYCK------------IEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKA 526
Query: 549 IDYIDLATQLFDEMKRKGIFPDVVTYTVL--IAWYHKHGRIGEKNKLFGE 596
+D+ + A LF+EMK+KG+ + ++ ++ + ++ E L E
Sbjct: 527 LDW-EKAEVLFEEMKQKGLHLNAISQGLIRAVKEMESEAKVTEDGNLLAE 575
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 28/304 (9%)
Query: 309 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 368
N+ + + C+R ++ A V E+M S + ++ FCK+G
Sbjct: 265 NAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVY 324
Query: 369 XXXXXCQ--IKPSIVNYTSLILLCKNK----LKGQQLYDKSLEVYNSMLQNAIRPNTIIC 422
+ + P V T + LCKN + L D S E + I+P + +
Sbjct: 325 ELAKTKEKSLPPRFV-ATLITALCKNDGTITFAQEMLGDLSGEAR----RRGIKPFSDVI 379
Query: 423 NHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLK 482
+ + CR ++A LL D +G +N ++H K A E++ M
Sbjct: 380 HSL----CRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMES 435
Query: 483 RNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCL 542
R + P V Y+ +ISG+AK M+ A + E + + TY L
Sbjct: 436 RGLKPDVYTYTVIISGYAKGGM------------MDEAQEILAEAKKKHKKLSPVTYHAL 483
Query: 543 IDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNK-LFGEMKANC 601
I G+CKI+ D A +L +EM R G+ P+ Y LI + EK + LF EMK
Sbjct: 484 IRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKG 543
Query: 602 ILLD 605
+ L+
Sbjct: 544 LHLN 547
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 10/132 (7%)
Query: 235 LMETGPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
++ GP P + +++ GD+ A E+L + G P V TY I G + G
Sbjct: 398 MISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGM 457
Query: 291 VDVAHKLV---RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 347
+D A +++ +K H KL P+ H A+I G+C+ +EAL++L EM P+
Sbjct: 458 MDEAQEILAEAKKKHKKLSPVTYH---ALIRGYCKIEEYDEALKLLNEMDRFGVQPNADE 514
Query: 348 YNMLLNAFCKKG 359
YN L+ +FC K
Sbjct: 515 YNKLIQSFCLKA 526
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 127/324 (39%), Gaps = 19/324 (5%)
Query: 275 VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 334
+V + R + G D+ ++ K C + LN N +I F + G A +V
Sbjct: 198 LVAIASDTRRMDAYGLWDLVKEIGEKESCGV--LNLEILNELIALFGKLGKSKAAFDVFS 255
Query: 335 EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKL 394
+ + P+ +Y + L A CK+ + + ++I +
Sbjct: 256 KTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEG 315
Query: 395 KGQQLYDKSLEVYN-SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLN 453
K ++ Y VY + + P + I + +G A +L D +
Sbjct: 316 KAEEAYS----VYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRG 371
Query: 454 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLF 513
++++IH +C+ K A L+ M+ + PG ++ ++ +K
Sbjct: 372 IKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSK------------ 419
Query: 514 TREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVT 573
T +++ A + + M G P++YTYT +I G+ K +D A ++ E K+K VT
Sbjct: 420 TGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVT 479
Query: 574 YTVLIAWYHKHGRIGEKNKLFGEM 597
Y LI Y K E KL EM
Sbjct: 480 YHALIRGYCKIEEYDEALKLLNEM 503
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 77.4 bits (189), Expect = 3e-14, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 3/161 (1%)
Query: 439 LTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISG 498
+ L + ++G+ N +Y +I + + MA E+ M+ V P ++ Y+ L+ G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 499 FAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQL 558
K N ++ + L ++ LF +S G PN+ TYT +I GFCK + + A L
Sbjct: 61 LCK---NGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTL 117
Query: 559 FDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 599
F +MK G PD TY LI + + G +L EM++
Sbjct: 118 FRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRS 158
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 21/143 (14%)
Query: 474 LELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCL 533
+EL M +R ++ V Y+TLI G + + ++A +F+EM G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQ------------AGDCDMAQEIFKEMVSDGVP 48
Query: 534 PNLYTYTCLIDGFCKIDYIDLAT---------QLFDEMKRKGIFPDVVTYTVLIAWYHKH 584
P++ TY L+DG CK ++ A LF + KG+ P+VVTYT +I+ + K
Sbjct: 49 PDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKK 108
Query: 585 GRIGEKNKLFGEMKANCILLDDG 607
G E LF +MK + L D G
Sbjct: 109 GFKEEAYTLFRKMKEDGPLPDSG 131
Score = 61.6 bits (148), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 80/179 (44%), Gaps = 15/179 (8%)
Query: 309 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 368
N+ + +I G Q G + A E+ +EM S PD+ +YN+LL+ CK G +
Sbjct: 15 NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAG 74
Query: 369 XXX----XXCQ-----IKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 418
C +KP++V YT++I CK K +++ ++ M ++ P+
Sbjct: 75 KVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFK-----EEAYTLFRKMKEDGPLPD 129
Query: 419 TIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
+ N ++R H R+G + L+++ + +Y + M+ K LE++
Sbjct: 130 SGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRLDKGFLEML 188
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 66/139 (47%), Gaps = 13/139 (9%)
Query: 235 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
+ + G + N TYT ++ GD +A EI ++ G P ++TY + GLC+ G
Sbjct: 7 MSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGK 66
Query: 291 VD---VAHKLVR--KLHCKLH----PLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRT 341
++ VA K+ L C L N + +I GFC++G EA + +MK
Sbjct: 67 LEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGP 126
Query: 342 FPDVYSYNMLLNAFCKKGD 360
PD +YN L+ A + GD
Sbjct: 127 LPDSGTYNTLIRAHLRDGD 145
Score = 56.2 bits (134), Expect = 7e-08, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 57/101 (56%), Gaps = 9/101 (8%)
Query: 523 LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYH 582
LF+EMS+ G + N TYT LI G + D+A ++F EM G+ PD++TY +L+
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 583 KHGRIGEKNKLFGEMKAN----CILLDDGIKKLQDPKLVQF 619
K+G++ EK + G+++ C L G+K P +V +
Sbjct: 63 KNGKL-EKALVAGKVEDGWDLFCSLSLKGVK----PNVVTY 98
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 25/203 (12%)
Query: 404 LEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHM 463
+E++ M Q + NT+ +++ + G A + ++ G+ + +YN ++
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 464 ICKESYPKMAL---------ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFT 514
+CK + AL +L + + V P VV Y+T+ISGF K+ F
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKG---------FK 111
Query: 515 REMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTY 574
E A LF++M G LP+ TY LI + + +L EM+ D TY
Sbjct: 112 EE---AYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 168
Query: 575 TVLIAWYHKHGRIGEKNKLFGEM 597
++ H G +K F EM
Sbjct: 169 GLVTDMLHD----GRLDKGFLEM 187
Score = 52.0 bits (123), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 15/133 (11%)
Query: 235 LMETGPLPNIHTYTIMMS--CGDIRL-AAEILGKIYR----------SGGNPTVVTYGTY 281
++ G P+I TY I++ C + +L A + GK+ G P VVTY T
Sbjct: 42 MVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 101
Query: 282 IRGLCECGYVDVAHKLVRKLHCKLHPL-NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSR 340
I G C+ G+ + A+ L RK+ + PL +S +N +I + G + E+++EM+S R
Sbjct: 102 ISGFCKKGFKEEAYTLFRKMK-EDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCR 160
Query: 341 TFPDVYSYNMLLN 353
D +Y ++ +
Sbjct: 161 FAGDASTYGLVTD 173
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/283 (21%), Positives = 126/283 (44%), Gaps = 20/283 (7%)
Query: 296 KLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAF 355
+L RK+ + N +N+++ + + G V++A+ +L+EM+ PD+ ++N LL+ +
Sbjct: 141 ELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGY 200
Query: 356 CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAI 415
KG +KPS + +SL+ G K++ Y +L+N +
Sbjct: 201 ASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAE--PGHLKLGKAIHGY--ILRNQL 256
Query: 416 RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 475
+ + ++ ++ + G A + + + I ++N ++ + K A
Sbjct: 257 WYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNI----VAWNSLVSGLSYACLLKDAEA 312
Query: 476 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPN 535
LM RM K + P + +++L SG+A E+ A + +M G PN
Sbjct: 313 LMIRMEKEGIKPDAITWNSLASGYA----TLGKPEK--------ALDVIGKMKEKGVAPN 360
Query: 536 LYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 578
+ ++T + G K A ++F +M+ +G+ P+ T + L+
Sbjct: 361 VVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLL 403
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/289 (21%), Positives = 122/289 (42%), Gaps = 24/289 (8%)
Query: 314 NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXX 373
N++I + + G + + +V MK ++ S+N +L+++ K G V
Sbjct: 128 NSLIVMYSRNGKLELSRKVFNSMKDR----NLSSWNSILSSYTKLGYVDDAIGLLDEMEI 183
Query: 374 CQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREG 433
C +KP IV + SL+ + + L ++ V M ++P+T + +L+ G
Sbjct: 184 CGLKPDIVTWNSLL----SGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPG 239
Query: 434 QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYS 493
+ + + + Y +I M K Y A + M +N+ V ++
Sbjct: 240 HLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNI----VAWN 295
Query: 494 TLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 553
+L+SG + + + A AL M + G P+ T+ L G+ + +
Sbjct: 296 SLVSGLS------------YACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPE 343
Query: 554 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
A + +MK KG+ P+VV++T + + K+G K+F +M+ +
Sbjct: 344 KALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGV 392
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 92/468 (19%), Positives = 178/468 (38%), Gaps = 85/468 (18%)
Query: 180 LIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETG 239
L++V ++ Q+ +GLE ++ CN L
Sbjct: 95 LLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSL------------------------ 130
Query: 240 PLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVR 299
I+M + +L E+ K++ S + + ++ + + + GYVD A L+
Sbjct: 131 ---------IVMYSRNGKL--ELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLD 179
Query: 300 KLH-CKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
++ C L P + +N+++ G+ +G +A+ VL+ M+ + P S + LL A +
Sbjct: 180 EMEICGLKP-DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEP 238
Query: 359 GDVXXXXXXXXXXXXCQIKPSIVNYTSLI-------LLCKNKLKGQQLYDKSLEVYNS-- 409
G + Q+ + T+LI L ++ + K++ +NS
Sbjct: 239 GHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLV 298
Query: 410 ------------------MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 451
M + I+P+ I N + + G+ +AL ++ E+G+
Sbjct: 299 SGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVA 358
Query: 452 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF--------AKEQ 503
N S+ I K + AL++ +M + V P STL+ KE
Sbjct: 359 PNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEV 418
Query: 504 SNFEMVERLFTREMNVACALFQEMSRIGCL------------PNLYTYTCLIDGFCKIDY 551
F + + L + VA AL + G L +L ++ C++ G+
Sbjct: 419 HGFCLRKNLIC-DAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGR 477
Query: 552 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 599
+ F M G+ PD +T+T +++ G + E K F M++
Sbjct: 478 GEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRS 525
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/273 (19%), Positives = 111/273 (40%), Gaps = 66/273 (24%)
Query: 386 LILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 445
L+ +C NK + + + +++ +L+ + N +CN ++ ++ R G+ + +
Sbjct: 95 LLQVCSNK----EGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSM 150
Query: 446 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN 505
++ N S+N I+ K Y A+ L+ M + P +V +++L+SG+A + +
Sbjct: 151 KDR----NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLS 206
Query: 506 FEMVERLFTREMNVA---------CALFQEMSRIGCLP----------------NLYTYT 540
+ + L + M +A +L Q ++ G L ++Y T
Sbjct: 207 KDAIAVL--KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVET 264
Query: 541 CLIDGFCKIDYIDLATQLFD-------------------------------EMKRKGIFP 569
LID + K Y+ A +FD M+++GI P
Sbjct: 265 TLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKP 324
Query: 570 DVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
D +T+ L + Y G+ + + G+MK +
Sbjct: 325 DAITWNSLASGYATLGKPEKALDVIGKMKEKGV 357
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 156/405 (38%), Gaps = 57/405 (14%)
Query: 235 LMETGPLPNIHTYT----IMMSCGDIRLAAEILGKIYRSGGNPTVVTYGT----YIRGLC 286
+ E G +PNI TY I M G+ A IL G P +TY T Y R
Sbjct: 210 MEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGFEPNPITYSTALLVYRRMED 269
Query: 287 ECGYVDVAHKLVRKLHCKLHPLNSHCFN-----AVIHGFCQR--------------GAVN 327
G ++ +L R+ + K N ++ + F R
Sbjct: 270 GMGALEFFVEL-REKYAKREIGNDVGYDWEFEFVKLENFIGRICYQVMRRWLVKDDNWTT 328
Query: 328 EALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGD---VXXXXXXXXXXXXCQIKPSIVNYT 384
L++L M S+ P + L+ A C + + V +I S+ N+
Sbjct: 329 RVLKLLNAMDSAGVRPSREEHERLIWA-CTREEHYIVGKELYKRIRERFSEISLSVCNH- 386
Query: 385 SLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTI----ICNH---ILRVHCREGQFRE 437
LI L K + +LE+Y +L PN + + +H +L + G +R
Sbjct: 387 -LIWLMGKAKK----WWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRGIWRW 441
Query: 438 ALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 497
+ LL ++G+ + +N ++ K S A+++ M+ P V++Y L+S
Sbjct: 442 GVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFKAMVDNGEKPTVISYGALLS 501
Query: 498 GFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 557
K +L+ V + M ++G PNLY YT + +L
Sbjct: 502 ALEKG--------KLYDEAFRV----WNHMIKVGIEPNLYAYTTMASVLTGQQKFNLLDT 549
Query: 558 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
L EM KGI P VVT+ +I+ ++G G + F MK+ +
Sbjct: 550 LLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENV 594
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 5/193 (2%)
Query: 310 SHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXX 369
SH FN ++ +RG + +L +M+ P +N +L A K +
Sbjct: 424 SH-FNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVACSKASETTAAIQIFK 482
Query: 370 XXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVH 429
KP++++Y +L+ + L+ +LYD++ V+N M++ I PN + V
Sbjct: 483 AMVDNGEKPTVISYGALL----SALEKGKLYDEAFRVWNHMIKVGIEPNLYAYTTMASVL 538
Query: 430 CREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGV 489
+ +F TLL++ +GI + ++N +I + +A E RM NV P
Sbjct: 539 TGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNE 598
Query: 490 VNYSTLISGFAKE 502
+ Y LI A +
Sbjct: 599 ITYEMLIEALAND 611
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 106/272 (38%), Gaps = 30/272 (11%)
Query: 206 ELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGK 265
E+ + CN L+ + L++ GP PN +Y +++S +I L+A
Sbjct: 378 EISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSHFNILLSAASKRG 437
Query: 266 IYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCK-LHPLNSHCFNAVIHGFCQRG 324
I+R G +L+ K+ K L P H +NAV+ +
Sbjct: 438 IWRWG------------------------VRLLNKMEDKGLKPQRRH-WNAVLVACSKAS 472
Query: 325 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYT 384
A+++ + M + P V SY LL+A K I+P++ YT
Sbjct: 473 ETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGIEPNLYAYT 532
Query: 385 SLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 444
++ + L GQQ ++ + M I P+ + N ++ R G A
Sbjct: 533 TMASV----LTGQQKFNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHR 588
Query: 445 FHEQGINLNQYSYNEIIHMICKESYPKMALEL 476
+ + N+ +Y +I + ++ P++A EL
Sbjct: 589 MKSENVEPNEITYEMLIEALANDAKPRLAYEL 620
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 118/264 (44%), Gaps = 17/264 (6%)
Query: 327 NEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSL 386
N+A+E E M + PD +Y+ +L+ + K G V KP + ++ L
Sbjct: 238 NKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVL 297
Query: 387 ILLCKNKLKGQQ-LYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 445
K+ G+ YD V M ++PN ++ N +L R G+ A +L +
Sbjct: 298 -----GKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEM 352
Query: 446 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN 505
E G+ N+ + ++ + K + + AL+L M + + Y+TL++ A +
Sbjct: 353 LEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLNMCA-DIGL 411
Query: 506 FEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK 565
E ERLF +M + + C P+ ++YT +++ + + A +LF+EM +
Sbjct: 412 EEEAERLFN-DMKES---------VQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKA 461
Query: 566 GIFPDVVTYTVLIAWYHKHGRIGE 589
G+ +V+ T L+ K RI +
Sbjct: 462 GVQVNVMGCTCLVQCLGKAKRIDD 485
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 137/321 (42%), Gaps = 29/321 (9%)
Query: 257 RLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH-CKLHPLNSHCFNA 315
+L E+ ++ + G +TY T I C + A + +++ L P + ++A
Sbjct: 203 QLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMP-DEVTYSA 261
Query: 316 VIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ 375
++ + + G V E L + E ++ PD ++++L F + GD
Sbjct: 262 ILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMD 321
Query: 376 IKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 435
+KP++V Y +L+ G+ +SL +N ML+ + PN +++++ +
Sbjct: 322 VKPNVVVYNTLLEAMGR--AGKPGLARSL--FNEMLEAGLTPNEKTLTALVKIYGKARWA 377
Query: 436 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV--LPGVVNYS 493
R+AL L E+ + ++ YN +++M + A L M K +V P +Y+
Sbjct: 378 RDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDM-KESVQCRPDNFSYT 436
Query: 494 TLI----SGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKI 549
++ SG E+ A LF+EM + G N+ TCL+ K
Sbjct: 437 AMLNIYGSGGKAEK----------------AMELFEEMLKAGVQVNVMGCTCLVQCLGKA 480
Query: 550 DYIDLATQLFDEMKRKGIFPD 570
ID +FD ++G+ PD
Sbjct: 481 KRIDDVVYVFDLSIKRGVKPD 501
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 15/214 (7%)
Query: 385 SLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 444
S I+ C + LY+K++E + M + + P+ + + IL V+ + G+ E L+L E
Sbjct: 225 STIITCAKRC---NLYNKAIEWFERMYKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYER 281
Query: 445 FHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS 504
G + +++ + M + ++ M +V P VV Y+TL+ +
Sbjct: 282 AVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGR--- 338
Query: 505 NFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 564
+ +A +LF EM G PN T T L+ + K + A QL++EMK
Sbjct: 339 ---------AGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKA 389
Query: 565 KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
K D + Y L+ G E +LF +MK
Sbjct: 390 KKWPMDFILYNTLLNMCADIGLEEEAERLFNDMK 423
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 12/201 (5%)
Query: 405 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
E+ M+++ + + I + I+ R + +A+ E ++ G+ ++ +Y+ I+ +
Sbjct: 207 EMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDVY 266
Query: 465 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALF 524
K + L L R + P + +S L F E +++ + +
Sbjct: 267 SKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFG-EAGDYDGIR-----------YVL 314
Query: 525 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 584
QEM + PN+ Y L++ + LA LF+EM G+ P+ T T L+ Y K
Sbjct: 315 QEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKA 374
Query: 585 GRIGEKNKLFGEMKANCILLD 605
+ +L+ EMKA +D
Sbjct: 375 RWARDALQLWEEMKAKKWPMD 395
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 13/185 (7%)
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
V N M+ N + P+ + + +R C G+ EA L+++ E+ + Y+YN ++ +C
Sbjct: 146 VLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLC 205
Query: 466 KESYPKMALELMPRMLKR-NVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALF 524
K + E + M +V P +V+++ LI ++ + A L
Sbjct: 206 KCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCN------------SKNLREAMYLV 253
Query: 525 QEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKH 584
++ G P+ + Y ++ GFC + A ++ +MK +G+ PD +TY LI K
Sbjct: 254 SKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKA 313
Query: 585 GRIGE 589
GR+ E
Sbjct: 314 GRVEE 318
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 91/190 (47%), Gaps = 9/190 (4%)
Query: 316 VIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDV-XXXXXXXXXXXXC 374
+ C+ G V+EA ++++E+ + PD Y+YN LL CK D+
Sbjct: 165 AVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDF 224
Query: 375 QIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNA-IRPNTIICNHILRVHCRE 432
+KP +V++T LI +C +K + +Y S L NA +P+ + N I++ C
Sbjct: 225 DVKPDLVSFTILIDNVCNSKNLREAMY------LVSKLGNAGFKPDCFLYNTIMKGFCTL 278
Query: 433 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 492
+ EA+ + + E+G+ +Q +YN +I + K + A + M+ P Y
Sbjct: 279 SKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATY 338
Query: 493 STLISGFAKE 502
++L++G ++
Sbjct: 339 TSLMNGMCRK 348
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 82/208 (39%), Gaps = 5/208 (2%)
Query: 185 ASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNI 244
A +S + + H+V N GLE + + ++ L L E P+
Sbjct: 135 APDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDT 194
Query: 245 HTYTIMMS----CGDIRLAAEILGKIYRS-GGNPTVVTYGTYIRGLCECGYVDVAHKLVR 299
+TY ++ C D+ + E + ++ P +V++ I +C + A LV
Sbjct: 195 YTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVS 254
Query: 300 KLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKG 359
KL + +N ++ GFC +EA+ V ++MK PD +YN L+ K G
Sbjct: 255 KLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAG 314
Query: 360 DVXXXXXXXXXXXXCQIKPSIVNYTSLI 387
V +P YTSL+
Sbjct: 315 RVEEARMYLKTMVDAGYEPDTATYTSLM 342
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 242 PNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 297
P++ ++TI++ + ++R A ++ K+ +G P Y T ++G C A +
Sbjct: 228 PDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGV 287
Query: 298 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 357
+K+ + + +N +I G + G V EA L+ M + PD +Y L+N C+
Sbjct: 288 YKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
Query: 358 KG 359
KG
Sbjct: 348 KG 349
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 106/232 (45%), Gaps = 20/232 (8%)
Query: 378 PSIVNYTSL-ILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTII--CNHILRVHCREGQ 434
P+++++ S+ ILLCK G Y+++LE + M + R + N +LR C E +
Sbjct: 134 PNLLSFKSMSILLCKIAKFGS--YEETLEAFVKMEKEIFRKKFGVDEFNILLRAFCTERE 191
Query: 435 FREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM-PRMLKRNVLPGVVNYS 493
+EA ++ E H + N + + N I+ + KE+ A EL M+KR P V Y
Sbjct: 192 MKEARSIFEKLHSR-FNPDVKTMN-ILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYG 249
Query: 494 TLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 553
I GF K+ R A LF++M R+ + T LI G
Sbjct: 250 IRIDGFCKK------------RNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKI 297
Query: 554 LATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
A QLFDE+ ++G+ PD Y L++ K G + K+ EM+ I D
Sbjct: 298 KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPD 349
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 107/264 (40%), Gaps = 29/264 (10%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
FN ++ FC + EA + E++ SR PDV + N+LL F + GDV
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKL-HSRFNPDVKTMNILLLGFKEAGDVTATELFYHEMV 237
Query: 373 XCQIKPSIVNYTSLI-LLCKNKLKGQQL-----YDK-SLEVYNSMLQNAIRPNTIICNHI 425
KP+ V Y I CK + G+ L D+ ++ +L I + + N I
Sbjct: 238 KRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNKI 297
Query: 426 LRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV 485
+A L ++ ++G+ + +YN ++ + K A+++M M ++ +
Sbjct: 298 -----------KARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGI 346
Query: 486 LPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDG 545
P V + ++ G K + N C +Q+M +P T L+
Sbjct: 347 EPDSVTFHSMFIGMMKSKEF----------GFNGVCEYYQKMKERSLVPKTPTIVMLMKL 396
Query: 546 FCKIDYIDLATQLFDEMKRKGIFP 569
FC ++L L+ M KG P
Sbjct: 397 FCHNGEVNLGLDLWKYMLEKGYCP 420
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 88/213 (41%), Gaps = 8/213 (3%)
Query: 242 PNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 297
P++ T I++ GD+ ++ + G P VTYG I G C+ A +L
Sbjct: 208 PDVKTMNILLLGFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRL 267
Query: 298 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 357
+ + +IHG +A ++ +E+ PD +YN L+++ K
Sbjct: 268 FEDMDRLDFDITVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMK 327
Query: 358 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQNAIR 416
GDV I+P V + S+ + + K+K G ++ E Y M + ++
Sbjct: 328 CGDVSGAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFG---FNGVCEYYQKMKERSLV 384
Query: 417 PNTIICNHILRVHCREGQFREALTLLEDFHEQG 449
P T ++++ C G+ L L + E+G
Sbjct: 385 PKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKG 417
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 123/311 (39%), Gaps = 25/311 (8%)
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF-PDVYSYN 349
V K V+ + C HCF + + + LEV M+ R + PD Y+
Sbjct: 85 VKTLDKYVKVVRC------DHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYS 137
Query: 350 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI---LLCKNKLKGQQLYDKSLEV 406
L++ KKG +P Y +LI L ++K K + L+
Sbjct: 138 KLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDK 197
Query: 407 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 466
+ +PN + N +LR + G+ + L +D ++ + Y++N ++ K
Sbjct: 198 MKGI--ERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 467 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQE 526
K ++ RM P ++ ++ LI + K+Q FE +E+ F+
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQ-EFEKMEQ-----------TFKS 303
Query: 527 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 586
+ R P L T+ +I + K ID A +F +M P +TY +I Y G
Sbjct: 304 LMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGS 363
Query: 587 IGEKNKLFGEM 597
+ ++F E+
Sbjct: 364 VSRAREIFEEV 374
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 111/264 (42%), Gaps = 16/264 (6%)
Query: 272 NPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE 331
P VVTY +R + G VD + L + L + + FN V+ + + G + E
Sbjct: 205 QPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEA 264
Query: 332 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 391
VL M+S+ PD+ ++N+L++++ KK + + KP++ + S+I+
Sbjct: 265 VLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMII--- 321
Query: 392 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 451
N K + + DK+ V+ M P+ I ++ ++ G A + E+ E
Sbjct: 322 NYGKARMI-DKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRV 380
Query: 452 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVER 511
L + N ++ + C+ A +L V P Y L + K +M E+
Sbjct: 381 LKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKA----DMKEQ 436
Query: 512 LFTREMNVACALFQEMSRIGCLPN 535
+ L ++M + G +PN
Sbjct: 437 V--------QILMKKMEKDGIVPN 452
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 18/172 (10%)
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRE 516
Y+++I ++ K+ +MA+ L M P Y+ LI+ + + +E++
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKV---- 191
Query: 517 MNVACALFQEMSRIG-CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYT 575
+M I C PN+ TY L+ F + +D LF ++ + PDV T+
Sbjct: 192 ----RGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFN 247
Query: 576 VLIAWYHKHGRIGEKNKLFGEMKAN---------CILLDDGIKKLQDPKLVQ 618
++ Y K+G I E + M++N +L+D KK + K+ Q
Sbjct: 248 GVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQ 299
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 12/124 (9%)
Query: 456 SYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTR 515
+YN +I CK+ A ++ M + P VV +STLI+G+ K +
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCK------------AK 59
Query: 516 EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYT 575
++ +F EM R G + N TYT LI GFC++ +D A L +EM G+ PD +T+
Sbjct: 60 RVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFH 119
Query: 576 VLIA 579
++A
Sbjct: 120 CMLA 123
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 62/118 (52%), Gaps = 12/118 (10%)
Query: 480 MLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTY 539
ML+ ++ P + Y+++I GF K+ ++ A + M+ GC P++ T+
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQD------------RVDDAKRMLDSMASKGCSPDVVTF 48
Query: 540 TCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
+ LI+G+CK +D ++F EM R+GI + VTYT LI + + G + L EM
Sbjct: 49 STLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM 106
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 241 LPNIHTYTIMMS--CGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHK 296
P TY M+ C R+ A +L + G +P VVT+ T I G C+ VD +
Sbjct: 7 FPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGME 66
Query: 297 LVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 356
+ ++H + N+ + +IHGFCQ G ++ A ++L EM S PD +++ +L C
Sbjct: 67 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Query: 357 KK 358
K
Sbjct: 127 SK 128
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 74/155 (47%), Gaps = 12/155 (7%)
Query: 410 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 469
ML+ +I P TI N ++ C++ + +A +L+ +G + + +++ +I+ CK
Sbjct: 1 MLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKR 60
Query: 470 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSR 529
+E+ M +R ++ V Y+TLI GF + +++ A L EM
Sbjct: 61 VDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQ------------VGDLDAAQDLLNEMIS 108
Query: 530 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 564
G P+ T+ C++ G C + A + +++++
Sbjct: 109 CGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 143
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
+N++I GFC++ V++A +L+ M S PDV +++ L+N +CK V
Sbjct: 13 YNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMH 72
Query: 373 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 432
I + V YT+LI + D + ++ N M+ + P+ I + +L C +
Sbjct: 73 RRGIVANTVTYTTLI----HGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 128
Query: 433 GQFREALTLLEDFHE 447
+ R+A +LED +
Sbjct: 129 KELRKAFAILEDLQK 143
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Query: 273 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 332
PT +TY + I G C+ VD A +++ + K + F+ +I+G+C+ V+ +E+
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 333 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCK 391
EM + +Y L++ FC+ GD+ C + P + + ++ LC
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 392 NK 393
K
Sbjct: 128 KK 129
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 183/452 (40%), Gaps = 54/452 (11%)
Query: 127 FRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFAS 186
F +I TF+ AG + +L + S +F+ + + L F+ L++
Sbjct: 84 FASVIRTFSRAGRLEDAISLFK----------SLHEFNCV-----NWSLSFDTLLQEMVK 128
Query: 187 NSMLEHAHQVFVSAKNVGLELHIR--SCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNI 244
S LE A +F G E++ R + N L+K L + G P+
Sbjct: 129 ESELEAACHIF-RKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDR 187
Query: 245 HTYTIMMSC----GDIRLAAEIL----GKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHK 296
+Y I+M G + A +L +I + G +V Y + LC+ G VD A +
Sbjct: 188 DSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIE 247
Query: 297 LVRKLHCKLHPLNSHCFNAVIHGFCQRGA--VNEALEVLEEMKSSRTFPDVYSYNMLLNA 354
++ K+ K C++ + G + + + +L E P + SY+ +
Sbjct: 248 ILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATD 307
Query: 355 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCK-NKLKGQQLYDKSLEVYN-SML 411
++G + +P+ Y + + LC+ KLK +++ V N M+
Sbjct: 308 LFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLK------EAVSVINKEMM 361
Query: 412 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ-GINLNQYSYNEIIHMICKESYP 470
Q P + N +++ C +G+ EA+ L+ +Q N+ +Y ++ +C++
Sbjct: 362 QGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQF 421
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV---ERLFTREMNVACALFQEM 527
A ++M ML ++ PGV Y +I G +E V E + +++M ++++ +
Sbjct: 422 LEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Query: 528 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLF 559
+ C FC ID +++ L
Sbjct: 482 AESVC-------------FCAIDVVEILEHLI 500
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 129/317 (40%), Gaps = 28/317 (8%)
Query: 272 NPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE 331
N + ++ LC+ D+A ++ ++++ + + + ++ GFC G + EA
Sbjct: 149 NSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATH 208
Query: 332 VLEEM----KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI 387
+L M + D+ Y +LL+A C G+V +K Y +
Sbjct: 209 LLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI- 267
Query: 388 LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIIC----NHILRVHCREGQFREALTLLE 443
+ + + +E +L + I C + + EG+ E +L
Sbjct: 268 -----EAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLL 322
Query: 444 DFHEQGINLNQYSYNEIIHMICKESYPKMALELMPR-MLKRNVLPGVVNYSTLISGFAKE 502
+G + Y + +C+ K A+ ++ + M++ + LP V Y+ LI G +
Sbjct: 323 AMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDD 382
Query: 503 QSNFEMVERLFTREMNVACALFQEMSR-IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE 561
+ E A ++MS+ + C+ N TY L+DG C+ A+Q+ +E
Sbjct: 383 GKSME------------AVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEE 430
Query: 562 MKRKGIFPDVVTYTVLI 578
M K FP V TY ++I
Sbjct: 431 MLIKSHFPGVETYHMMI 447
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 86/196 (43%), Gaps = 15/196 (7%)
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
V M +++ + ++R R G+ +A++L + HE S++ ++ +
Sbjct: 68 VIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMV 127
Query: 466 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQ 525
KES LE + ++ VN + I+ N M ++A +FQ
Sbjct: 128 KES----ELEAACHIFRKYCYGWEVN--SRITAL-----NLLMKVLCQVNRSDLASQVFQ 176
Query: 526 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQL----FDEMKRKGIFPDVVTYTVLIAWY 581
EM+ GC P+ +Y L+ GFC ++ AT L F + +KG D+V Y +L+
Sbjct: 177 EMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDAL 236
Query: 582 HKHGRIGEKNKLFGEM 597
G + + ++ G++
Sbjct: 237 CDAGEVDDAIEILGKI 252
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/452 (20%), Positives = 183/452 (40%), Gaps = 54/452 (11%)
Query: 127 FRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFAS 186
F +I TF+ AG + +L + S +F+ + + L F+ L++
Sbjct: 84 FASVIRTFSRAGRLEDAISLFK----------SLHEFNCV-----NWSLSFDTLLQEMVK 128
Query: 187 NSMLEHAHQVFVSAKNVGLELHIR--SCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNI 244
S LE A +F G E++ R + N L+K L + G P+
Sbjct: 129 ESELEAACHIF-RKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDR 187
Query: 245 HTYTIMMSC----GDIRLAAEIL----GKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHK 296
+Y I+M G + A +L +I + G +V Y + LC+ G VD A +
Sbjct: 188 DSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIE 247
Query: 297 LVRKLHCKLHPLNSHCFNAVIHGFCQRGA--VNEALEVLEEMKSSRTFPDVYSYNMLLNA 354
++ K+ K C++ + G + + + +L E P + SY+ +
Sbjct: 248 ILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATD 307
Query: 355 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCK-NKLKGQQLYDKSLEVYN-SML 411
++G + +P+ Y + + LC+ KLK +++ V N M+
Sbjct: 308 LFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLK------EAVSVINKEMM 361
Query: 412 QNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ-GINLNQYSYNEIIHMICKESYP 470
Q P + N +++ C +G+ EA+ L+ +Q N+ +Y ++ +C++
Sbjct: 362 QGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQF 421
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV---ERLFTREMNVACALFQEM 527
A ++M ML ++ PGV Y +I G +E V E + +++M ++++ +
Sbjct: 422 LEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKAL 481
Query: 528 SRIGCLPNLYTYTCLIDGFCKIDYIDLATQLF 559
+ C FC ID +++ L
Sbjct: 482 AESVC-------------FCAIDVVEILEHLI 500
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 129/317 (40%), Gaps = 28/317 (8%)
Query: 272 NPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALE 331
N + ++ LC+ D+A ++ ++++ + + + ++ GFC G + EA
Sbjct: 149 NSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATH 208
Query: 332 VLEEM----KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI 387
+L M + D+ Y +LL+A C G+V +K Y +
Sbjct: 209 LLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHI- 267
Query: 388 LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIIC----NHILRVHCREGQFREALTLLE 443
+ + + +E +L + I C + + EG+ E +L
Sbjct: 268 -----EAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLL 322
Query: 444 DFHEQGINLNQYSYNEIIHMICKESYPKMALELMPR-MLKRNVLPGVVNYSTLISGFAKE 502
+G + Y + +C+ K A+ ++ + M++ + LP V Y+ LI G +
Sbjct: 323 AMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDD 382
Query: 503 QSNFEMVERLFTREMNVACALFQEMSR-IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE 561
+ E A ++MS+ + C+ N TY L+DG C+ A+Q+ +E
Sbjct: 383 GKSME------------AVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEE 430
Query: 562 MKRKGIFPDVVTYTVLI 578
M K FP V TY ++I
Sbjct: 431 MLIKSHFPGVETYHMMI 447
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 86/196 (43%), Gaps = 15/196 (7%)
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
V M +++ + ++R R G+ +A++L + HE S++ ++ +
Sbjct: 68 VIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMV 127
Query: 466 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQ 525
KES LE + ++ VN + I+ N M ++A +FQ
Sbjct: 128 KES----ELEAACHIFRKYCYGWEVN--SRITAL-----NLLMKVLCQVNRSDLASQVFQ 176
Query: 526 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQL----FDEMKRKGIFPDVVTYTVLIAWY 581
EM+ GC P+ +Y L+ GFC ++ AT L F + +KG D+V Y +L+
Sbjct: 177 EMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDAL 236
Query: 582 HKHGRIGEKNKLFGEM 597
G + + ++ G++
Sbjct: 237 CDAGEVDDAIEILGKI 252
>AT3G60040.1 | Symbols: | F-box family protein |
chr3:22175937-22179728 REVERSE LENGTH=838
Length = 838
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Query: 466 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQ 525
K + P AL + M + + P V++Y+TLI G+ + + E++ A +F+
Sbjct: 701 KGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGY------------VVSGELDKAKEMFR 748
Query: 526 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
EM+ G LPN++TY +I G C A L EM+ +G P+ V Y+ L+ + K G
Sbjct: 749 EMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAG 808
Query: 586 RIGEKNKLFGEM 597
++ E K+ EM
Sbjct: 809 KLSEARKVIKEM 820
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Query: 254 GDIRLAA-EILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHC 312
G+ LAA L + G +P+V+ Y T I G G +D A ++ R++ K N
Sbjct: 702 GNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFT 761
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKG 359
+N++I G C G EA +L+EM+S P+ Y+ L+ K G
Sbjct: 762 YNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAG 808
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 4/109 (3%)
Query: 376 IKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 435
I PS+++YT+LI + +L DK+ E++ M PN N ++R C G+F
Sbjct: 720 IDPSVLHYTTLI---DGYVVSGEL-DKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEF 775
Query: 436 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 484
REA LL++ +G N N Y+ ++ + K A +++ M+K+
Sbjct: 776 REACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARKVIKEMVKKG 824
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 55/136 (40%), Gaps = 12/136 (8%)
Query: 438 ALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 497
ALT L E GI+ + Y +I A E+ M + LP V Y+++I
Sbjct: 708 ALTTLNHMKEVGIDPSVLHYTTLIDGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIR 767
Query: 498 GFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 557
G E AC L +EM GC PN Y+ L+ K + A +
Sbjct: 768 GLC------------MAGEFREACWLLKEMESRGCNPNFVVYSTLVGYLRKAGKLSEARK 815
Query: 558 LFDEMKRKGIFPDVVT 573
+ EM +KG + +V+
Sbjct: 816 VIKEMVKKGHYVHLVS 831
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 97/199 (48%), Gaps = 20/199 (10%)
Query: 414 AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMA 473
+I P+ N +++ C +G F EA+ L+++ +G+ + ++N ++H ESY K
Sbjct: 172 SIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLH----ESYTKGK 227
Query: 474 LE----LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSR 529
E + RM+++NV + +Y+ + G A E + EMV +LF ++
Sbjct: 228 FEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMV------------SLFDKLKG 275
Query: 530 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 589
P+++T+T +I GF +D A + E+++ G P + L+ K G +
Sbjct: 276 NELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLES 335
Query: 590 KNKLFGEMKANCILLDDGI 608
+L E+ A +L+D+ +
Sbjct: 336 AYELCKEIFAKRLLVDEAV 354
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 98/214 (45%), Gaps = 5/214 (2%)
Query: 274 TVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLH-PLNSHCFNAVIHGFCQRGAVNEALEV 332
T +++ + D+ + ++L KL + +N +I G C +G+ EA+ +
Sbjct: 140 TALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVAL 199
Query: 333 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 392
++E+++ PD ++N+LL+ KG +K I +Y + +L
Sbjct: 200 IDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAM 259
Query: 393 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 452
+ K +++ + +++ + N ++P+ +++ EG+ EA+T ++ + G
Sbjct: 260 ENKSEEM----VSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRP 315
Query: 453 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVL 486
++ +N ++ ICK + A EL + + +L
Sbjct: 316 LKFVFNSLLPAICKAGDLESAYELCKEIFAKRLL 349
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 86/207 (41%), Gaps = 8/207 (3%)
Query: 273 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 332
P V +Y T I+GLC G A L+ ++ K + FN ++H +G E ++
Sbjct: 175 PDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQI 234
Query: 333 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI--LLC 390
M D+ SYN L + ++KP + +T++I +
Sbjct: 235 WARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVS 294
Query: 391 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 450
+ KL D+++ Y + +N RP + N +L C+ G A L ++ + +
Sbjct: 295 EGKL------DEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRL 348
Query: 451 NLNQYSYNEIIHMICKESYPKMALELM 477
+++ E++ + K S A E++
Sbjct: 349 LVDEAVLQEVVDALVKGSKQDEAEEIV 375
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 81/180 (45%), Gaps = 15/180 (8%)
Query: 418 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
NT I N ILR + G + + + +G+ + +SY+ + ++CK P A++L
Sbjct: 188 NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLY 247
Query: 478 PRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLY 537
M R + VV Y+T+I Q + +F+EM GC PN+
Sbjct: 248 KEMKSRRMKLDVVAYNTVIRAIGASQG------------VEFGIRVFREMRERGCEPNVA 295
Query: 538 TYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
T+ +I C+ + A ++ DEM ++G PD +TY L + K I LFG M
Sbjct: 296 THNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEI---LSLFGRM 352
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/310 (19%), Positives = 116/310 (37%), Gaps = 60/310 (19%)
Query: 309 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 368
N+ N ++ G+ + G + E ++M + D++SY++ ++ CK G
Sbjct: 188 NTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSG--------- 238
Query: 369 XXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRV 428
KP K++++Y M ++ + + N ++R
Sbjct: 239 --------KPW----------------------KAVKLYKEMKSRRMKLDVVAYNTVIRA 268
Query: 429 HCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPG 488
+ + + E+G N ++N II ++C++ + A ++ M KR P
Sbjct: 269 IGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPD 328
Query: 489 VVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 548
+ Y L S K +LF M R G P + TY L+ F +
Sbjct: 329 SITYMCLFSRLEKPSE---------------ILSLFGRMIRSGVRPKMDTYVMLMRKFER 373
Query: 549 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 608
++ ++ MK G PD Y +I + G + + EM ++ G+
Sbjct: 374 WGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEM------IERGL 427
Query: 609 KKLQDPKLVQ 618
+ P+LV+
Sbjct: 428 SPRRRPELVE 437
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/335 (20%), Positives = 134/335 (40%), Gaps = 23/335 (6%)
Query: 255 DIRLAAEILGKIYR-SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSH-C 312
D + A E + R SG T T+ I L + +++ L+ ++ + +H
Sbjct: 60 DWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVT 119
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
F V + V EA++ +++ + YN L++A C+ V
Sbjct: 120 FRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYN-LVDALCEHKHVVEAEELCFGKN 178
Query: 373 XCQIKPSIVNYT--SLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 430
S+ N +LIL +KL + K E + M + + + + + C
Sbjct: 179 VIGNGFSVSNTKIHNLILRGWSKL---GWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMC 235
Query: 431 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 490
+ G+ +A+ L ++ + + L+ +YN +I I + + + M +R P V
Sbjct: 236 KSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVA 295
Query: 491 NYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 550
++T+I ++ M A + EM + GC P+ TY CL F +++
Sbjct: 296 THNTIIKLLCEDG------------RMRDAYRMLDEMPKRGCQPDSITYMCL---FSRLE 340
Query: 551 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
LF M R G+ P + TY +L+ + + G
Sbjct: 341 KPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERWG 375
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/398 (18%), Positives = 153/398 (38%), Gaps = 36/398 (9%)
Query: 100 SLNWKIAREKKFGSWVETH-GFSHSVNYFRIIIHTFAMAGMHLEV---FALLRDIVGYCK 155
S +W+ A E F +WVE GF H+ F +I G + E +AL+ ++G +
Sbjct: 58 SNDWQKALE--FFNWVERESGFRHTTETFNRVIDIL---GKYFEFEISWALINRMIGNTE 112
Query: 156 CDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFL 215
+P+H + F ++ K + + +++ A + + L N +
Sbjct: 113 S------------VPNH--VTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSFYNLV 158
Query: 216 LK-CLXXXXXXXXXXXXXXXLMETG-PLPNIHTYTIMM----SCGDIRLAAEILGKIYRS 269
C ++ G + N + +++ G E K+
Sbjct: 159 DALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTE 218
Query: 270 GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEA 329
G + +Y Y+ +C+ G A KL +++ + L+ +N VI V
Sbjct: 219 GVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFG 278
Query: 330 LEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL 389
+ V EM+ P+V ++N ++ C+ G + +P + Y L
Sbjct: 279 IRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLF-- 336
Query: 390 CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQG 449
++L+ + L ++ M+++ +RP ++R R G + L + + E G
Sbjct: 337 --SRLEKPS---EILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESG 391
Query: 450 INLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 487
+ +YN +I + ++ MA E M++R + P
Sbjct: 392 DTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 124/311 (39%), Gaps = 25/311 (8%)
Query: 291 VDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF-PDVYSYN 349
V K V+ + C HCF + + + LEV M+ R + PD Y+
Sbjct: 85 VKTLDKYVKVVRC------DHCF-LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYS 137
Query: 350 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI---LLCKNKLKGQQLYDKSLEV 406
L++ KKG +P Y +LI L ++K K + L+
Sbjct: 138 KLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDK 197
Query: 407 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 466
+ + +PN + N +LR + G+ + L +D ++ + Y++N ++ K
Sbjct: 198 MKGIER--CQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGK 255
Query: 467 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQE 526
K ++ RM P ++ ++ LI + K+Q FE +E+ F+
Sbjct: 256 NGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQE-FEKMEQ-----------TFKS 303
Query: 527 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 586
+ R P L T+ +I + K ID A +F +M P +TY +I Y G
Sbjct: 304 LMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGS 363
Query: 587 IGEKNKLFGEM 597
+ ++F E+
Sbjct: 364 VSRAREIFEEV 374
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 109/263 (41%), Gaps = 16/263 (6%)
Query: 273 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 332
P VVTY +R + G VD + L + L + + FN V+ + + G + E V
Sbjct: 206 PNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAV 265
Query: 333 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 392
L M+S+ PD+ ++N+L++++ KK + + KP++ + S+I+
Sbjct: 266 LTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMII---- 321
Query: 393 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 452
++ DK+ V+ M P+ I ++ ++ G A + E+ E L
Sbjct: 322 NYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVL 381
Query: 453 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 512
+ N ++ + C+ A +L V P Y L + K +M E++
Sbjct: 382 KASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKA----DMKEQV 437
Query: 513 FTREMNVACALFQEMSRIGCLPN 535
L ++M + G +PN
Sbjct: 438 --------QILMKKMEKDGIVPN 452
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 9/145 (6%)
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRE 516
Y+++I ++ K+ +MA+ L M P Y+ LI+ + + +E++
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKV---- 191
Query: 517 MNVACALFQEMSRIG-CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYT 575
+M I C PN+ TY L+ F + +D LF ++ + PDV T+
Sbjct: 192 ----RGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFN 247
Query: 576 VLIAWYHKHGRIGEKNKLFGEMKAN 600
++ Y K+G I E + M++N
Sbjct: 248 GVMDAYGKNGMIKEMEAVLTRMRSN 272
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 126/292 (43%), Gaps = 17/292 (5%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
F VI + G + EA+EV ++ + R P Y+ N LL +K
Sbjct: 111 FRDVIAAYGFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQ-SLELVPEILVK 169
Query: 373 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR- 431
C++ + T IL+ G+ D + E+ M Q+++ + + + +L C+
Sbjct: 170 ACRMGVRLEESTFGILIDALCRIGE--VDCATELVRYMSQDSVIVDPRLYSRLLSSVCKH 227
Query: 432 -EGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 490
+ + + LED + + Y ++ + + K + ++ +M V P +V
Sbjct: 228 KDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLV 287
Query: 491 NYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 550
Y+ ++ G ++ + A LF E+ +G P++YTY I+G CK +
Sbjct: 288 CYTIVLQGVIADE------------DYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQN 335
Query: 551 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
I+ A ++ M + G P+VVTY +LI K G + L+ EM+ N +
Sbjct: 336 DIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGV 387
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 93/243 (38%), Gaps = 41/243 (16%)
Query: 256 IRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVR-----------KLHCK 304
+ L EIL K R G T+G I LC G VD A +LVR +L+ +
Sbjct: 160 LELVPEILVKACRMGVRLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSR 219
Query: 305 L-----HPLNSHCFNA---------------------VIHGFCQRGAVNEALEVLEEMKS 338
L +S CF+ V+ + G E + VL +MK
Sbjct: 220 LLSSVCKHKDSSCFDVIGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKC 279
Query: 339 SRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQ 398
R PD+ Y ++L D + P + Y I N L Q
Sbjct: 280 DRVEPDLVCYTIVLQGVIADEDYPKADKLFDELLLLGLAPDVYTYNVYI----NGLCKQN 335
Query: 399 LYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYN 458
+ +L++ +SM + PN + N +++ + G A TL ++ G+N N ++++
Sbjct: 336 DIEGALKMMSSMNKLGSEPNVVTYNILIKALVKAGDLSRAKTLWKEMETNGVNRNSHTFD 395
Query: 459 EII 461
+I
Sbjct: 396 IMI 398
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/400 (19%), Positives = 149/400 (37%), Gaps = 38/400 (9%)
Query: 113 SWVETHGFSHSVNYFRIIIHTFAMAGM---------HLEVF-------ALLRDIVGYCKC 156
S + H + +R +I T A + HLEV ++ RD++
Sbjct: 61 SSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAYGF 120
Query: 157 DDSFEQ-FSTLLDLPHH----SVLVFNVLIKVFASNSM-LEHAHQVFVSAKNVGLELHIR 210
E+ +P+ S N L+ V LE ++ V A +G+ L
Sbjct: 121 SGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEES 180
Query: 211 SCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMS---------CGDIRLAAE 261
+ L+ L + + + + Y+ ++S C D+ E
Sbjct: 181 TFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLE 240
Query: 262 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 321
L K S P + Y +R L E G ++ ++ C + C+ V+ G
Sbjct: 241 DLRKTRFS---PGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVI 297
Query: 322 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 381
+A ++ +E+ PDVY+YN+ +N CK+ D+ +P++V
Sbjct: 298 ADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVV 357
Query: 382 NYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 441
Y LI K +K L ++ ++ M N + N+ + ++ + + A L
Sbjct: 358 TYNILI---KALVKAGDL-SRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGL 413
Query: 442 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRML 481
LE+ + + E+I +C++ A+EL+ ++
Sbjct: 414 LEEAFNMNVFVKSSRIEEVISRLCEKGLMDQAVELLAHLV 453
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 107/276 (38%), Gaps = 53/276 (19%)
Query: 308 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVX--XXX 365
L F +I C+ G V+ A E++ M D Y+ LL++ CK D
Sbjct: 177 LEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVI 236
Query: 366 XXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHI 425
+ P + +YT ++ +G+++ + V N M + + P+ ++C I
Sbjct: 237 GYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEV----VSVLNQMKCDRVEPD-LVCYTI 291
Query: 426 LRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNV 485
+ QG+ I E YPK A +L +L +
Sbjct: 292 VL--------------------QGV-------------IADEDYPK-ADKLFDELLLLGL 317
Query: 486 LPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDG 545
P V Y+ I+G K+ ++ A + M+++G PN+ TY LI
Sbjct: 318 APDVYTYNVYINGLCKQN------------DIEGALKMMSSMNKLGSEPNVVTYNILIKA 365
Query: 546 FCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWY 581
K + A L+ EM+ G+ + T+ ++I+ Y
Sbjct: 366 LVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAY 401
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 124/296 (41%), Gaps = 29/296 (9%)
Query: 311 HCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXX 370
H +I + G + +A ++ +EM DV +N LL + K G++
Sbjct: 152 HVVTGLIQMYFSCGGLGDARKMFDEM----LVKDVNVWNALLAGYGKVGEMDEARSLLEM 207
Query: 371 XXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHC 430
C ++ V++T +I + + ++EV+ ML + P+ + +L
Sbjct: 208 MP-CWVRNE-VSWTCVISGYAKSGRASE----AIEVFQRMLMENVEPDEVTLLAVLSACA 261
Query: 431 REGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 490
G + +G+N N +I M K AL++ + +RNV V
Sbjct: 262 DLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNV----V 317
Query: 491 NYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 550
++T+I+G A E A A+F M + G PN T+ ++ +
Sbjct: 318 TWTTIIAGLATHGHGAE------------ALAMFNRMVKAGVRPNDVTFIAILSACSHVG 365
Query: 551 YIDLATQLFDEMKRK-GIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM--KANCIL 603
++DL +LF+ M+ K GI P++ Y +I + G++ E +++ M KAN +
Sbjct: 366 WVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAI 421
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 85/181 (46%), Gaps = 14/181 (7%)
Query: 399 LYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ-GINLNQYSY 457
L D S++ M+ I+PN N ++ REG+ + + E+ G + N YSY
Sbjct: 226 LDDVSVDEAKKMI-GKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSY 284
Query: 458 NEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREM 517
N ++ C A ++ M R V+ +V Y+T+I G SNFE+V+
Sbjct: 285 NVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLC---SNFEVVK------- 334
Query: 518 NVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 577
A LF++M G TY L++G+CK +D ++ EMKRKG D +T L
Sbjct: 335 --AKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEAL 392
Query: 578 I 578
+
Sbjct: 393 V 393
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/333 (19%), Positives = 131/333 (39%), Gaps = 31/333 (9%)
Query: 175 LVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXX 234
VF++LIK + ++ A V ++ G+ I +CN L+ +
Sbjct: 163 FVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSR------------- 209
Query: 235 LMETGPLPNIHTYTIMMSCGDIRL--AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 292
G Y + D+ + A +++GKI P T+ + + G +
Sbjct: 210 --RRGASNGYKMYREVFGLDDVSVDEAKKMIGKI-----KPNATTFNSMMVSFYREGETE 262
Query: 293 VAHKLVRKLHCKLH-PLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNML 351
+ ++ R++ ++ N + +N ++ +C RG ++EA +V EEMK D+ +YN +
Sbjct: 263 MVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTM 322
Query: 352 LNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSML 411
+ C +V I+ + + Y L+ N D L VY M
Sbjct: 323 IGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLV----NGYCKAGDVDSGLVVYREMK 378
Query: 412 QNAIRPNTIICNHILRVHC--REGQ-FREALTLLED-FHEQGINLNQYSYNEIIHMICKE 467
+ + + ++ C R+GQ EA +++D E ++ Y ++ +C++
Sbjct: 379 RKGFEADGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCED 438
Query: 468 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 500
AL + M+ + P Y I G+
Sbjct: 439 GKMDRALNIQAEMVGKGFKPSQETYRAFIDGYG 471
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/213 (20%), Positives = 101/213 (47%), Gaps = 28/213 (13%)
Query: 401 DKSLEVYNSMLQNAIRPNT--IICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYN 458
D+ L+V+ S++++ R + + + +++ + A+ ++ +GIN + N
Sbjct: 142 DRVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCN 201
Query: 459 EIIHMICKE--------------SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS 504
+I + + ++++ +M+ + + P +++++ F +E
Sbjct: 202 ALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGK-IKPNATTFNSMMVSFYREGE 260
Query: 505 NFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 564
EMVER++ REM +GC PN+Y+Y L++ +C + A ++++EMK
Sbjct: 261 T-EMVERIW-REME---------EEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKV 309
Query: 565 KGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
+G+ D+V Y +I + + + +LF +M
Sbjct: 310 RGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDM 342
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 112/264 (42%), Gaps = 24/264 (9%)
Query: 289 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSS-RTFPDVYS 347
G DV+ +K+ K+ P N+ FN+++ F + G + EM+ P+VYS
Sbjct: 225 GLDDVSVDEAKKMIGKIKP-NATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYS 283
Query: 348 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYD--KSL 404
YN+L+ A+C +G + + IV Y ++I LC N ++ K+
Sbjct: 284 YNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSN-------FEVVKAK 336
Query: 405 EVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
E++ M I + H++ +C+ G L + + +G + + ++ +
Sbjct: 337 ELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGL 396
Query: 465 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEM-VERLFTR-EMNVACA 522
C + + +E +V + + F ++ +E+ V+RL +M+ A
Sbjct: 397 CDDRDGQRVVEA----------ADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALN 446
Query: 523 LFQEMSRIGCLPNLYTYTCLIDGF 546
+ EM G P+ TY IDG+
Sbjct: 447 IQAEMVGKGFKPSQETYRAFIDGY 470
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 129/319 (40%), Gaps = 20/319 (6%)
Query: 289 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF-PDVYS 347
G A KL L L+ F+ V+ + + G++ EA VLE M + PDVY
Sbjct: 572 GEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYL 631
Query: 348 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVY 407
+ +L + K I + Y +I C L +L +
Sbjct: 632 FRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSG----TF 687
Query: 408 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK- 466
M++ PNT+ N +L V+ + F++ L G+ ++ SYN II K
Sbjct: 688 EEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKN 746
Query: 467 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQE 526
+ Y M+ + M + Y+TL+ + K+ ++M ++ +
Sbjct: 747 KDYTNMS-SAIKNMQFDGFSVSLEAYNTLLDAYGKD------------KQMEKFRSILKR 793
Query: 527 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 586
M + P+ YTY +I+ + + +ID + E+K G+ PD+ +Y LI Y G
Sbjct: 794 MKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGM 853
Query: 587 IGEKNKLFGEMKANCILLD 605
+ E L EM+ I+ D
Sbjct: 854 VEEAVGLVKEMRGRNIIPD 872
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 122/312 (39%), Gaps = 55/312 (17%)
Query: 276 VTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNS--HCFNAVIHGFCQRGAVNEALEVL 333
V Y +R L D A L+++L C H FN VI+ ++G V A +
Sbjct: 175 VAYSLILRVLGRREEWDRAEDLIKEL-CGFHEFQKSYQVFNTVIYACTKKGNVKLASKWF 233
Query: 334 EEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNK 393
M P+V + ML+ + K +V I Y+S+I + +
Sbjct: 234 HMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESA-YSSMITIY-TR 291
Query: 394 LKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLN 453
L+ LYDK+ EV + M Q+ +R + L +L + +QG
Sbjct: 292 LR---LYDKAEEVIDLMKQDRVRL----------------KLENWLVMLNAYSQQG---- 328
Query: 454 QYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLF 513
++A ++ M P ++ Y+TLI+G+ K +F
Sbjct: 329 ---------------KMELAESILVSMEAAGFSPNIIAYNTLITGYGK----------IF 363
Query: 514 TREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVT 573
+M A LF + IG P+ +Y +I+G+ + D + A + E+KR G P+
Sbjct: 364 --KMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFN 421
Query: 574 YTVLIAWYHKHG 585
LI K+G
Sbjct: 422 LFTLINLQAKYG 433
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 88/443 (19%), Positives = 177/443 (39%), Gaps = 75/443 (16%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXX 232
+++ +N LI + +E A +F N+GLE S +++
Sbjct: 348 NIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYY 407
Query: 233 XXLMETGPLPN-IHTYTIM---MSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCEC 288
L G PN + +T++ GD A + + + G + + G ++ +
Sbjct: 408 QELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSIL-GIILQAYEKV 466
Query: 289 GYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 348
G +DV +++ LN F++++ + + G V++ L +L E K + + + Y
Sbjct: 467 GKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLY 526
Query: 349 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYN 408
++L+ C K S QL D ++++YN
Sbjct: 527 HLLI---------------------CSCKES-----------------GQLTD-AVKIYN 547
Query: 409 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 468
+++ N I + ++ ++ G+F EA L + G+ L++ ++ ++ M K
Sbjct: 548 HKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAG 607
Query: 469 YPKMA---LELMPRMLKRNVLPGVVNYSTLISGFAK--------------EQSNFEMVER 511
+ A LE+M +++++P V + ++ + K +S +
Sbjct: 608 SLEEACSVLEIMDE--QKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQE 665
Query: 512 LFTREMNVACA----------LFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDE 561
++ +N CA F+EM R G PN T+ L+D + K +LF
Sbjct: 666 MYNCVIN-CCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLL 724
Query: 562 MKRKGIFPDVVTYTVLIAWYHKH 584
KR G+ DV++Y +IA Y K+
Sbjct: 725 AKRHGVV-DVISYNTIIAAYGKN 746
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 13/181 (7%)
Query: 344 DVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKS 403
DV SYN ++ A+ K D IK + S+ L N L DK
Sbjct: 732 DVISYNTIIAAYGKNKDYTNMS--------SAIKNMQFDGFSVSLEAYNTLLDAYGKDKQ 783
Query: 404 LEVYNSMLQNAIR----PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 459
+E + S+L+ + P+ N ++ ++ +G E +L++ E G+ + SYN
Sbjct: 784 MEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNT 843
Query: 460 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE-RLFTREMN 518
+I + A+ L+ M RN++P V Y+ L++ + E ++ L+ ++M
Sbjct: 844 LIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIKWSLWMKQMG 903
Query: 519 V 519
+
Sbjct: 904 I 904
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/192 (20%), Positives = 84/192 (43%), Gaps = 13/192 (6%)
Query: 407 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 466
++ ML+ +RPN ++ ++ + EA + GI + + +Y+ +I + +
Sbjct: 233 FHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGI-VCESAYSSMITIYTR 291
Query: 467 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQE 526
A E++ M + V + N+ +++ ++++ +M +A ++
Sbjct: 292 LRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQG------------KMELAESILVS 339
Query: 527 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGR 586
M G PN+ Y LI G+ KI ++ A LF + G+ PD +Y +I + +
Sbjct: 340 MEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADN 399
Query: 587 IGEKNKLFGEMK 598
E + E+K
Sbjct: 400 YEEAKHYYQELK 411
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 142/364 (39%), Gaps = 21/364 (5%)
Query: 239 GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
G P++ TI M +R A E+ + G + ++ +R LCE +V A
Sbjct: 181 GVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAA 240
Query: 295 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 354
+ + P +S +N +I G+ + G V E +VL+EM S PD SY+ L+
Sbjct: 241 KSVFNAKKGNI-PFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEG 299
Query: 355 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 414
+ G + P Y ++I N + + +D+S+ Y ML
Sbjct: 300 LGRTGRINDSVEIFDNIKHKGNVPDANVYNAMIC---NFISARD-FDESMRYYRRMLDEE 355
Query: 415 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 474
PN + ++ + + +AL + E+ +G+ + +C P A+
Sbjct: 356 CEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAM 415
Query: 475 ELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLP 534
+ + K Y L+ K S F L ++ EM G
Sbjct: 416 VIYQKSRKAGCRISESAYKLLL----KRLSRFGKCGMLLN--------VWDEMQESGYPS 463
Query: 535 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
++ Y ++DG C I +++ A + +E RKG P+ Y+ L + + KLF
Sbjct: 464 DVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLF 523
Query: 595 GEMK 598
++K
Sbjct: 524 LKIK 527
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/305 (18%), Positives = 125/305 (40%), Gaps = 16/305 (5%)
Query: 277 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEM 336
+Y I G + G V+ K+++++ + ++ +I G + G +N+++E+ + +
Sbjct: 257 SYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNI 316
Query: 337 KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKG 396
K PD YN ++ F D + +P++ Y+ L+ +KG
Sbjct: 317 KHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLV---SGLIKG 373
Query: 397 QQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYS 456
+++ D +LE++ ML + P T + L+ C G A+ + + + G +++ +
Sbjct: 374 RKVSD-ALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESA 432
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRE 516
Y ++ + + M L + M + V Y ++ G
Sbjct: 433 YKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLC------------IIGH 480
Query: 517 MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTV 576
+ A + +E R G PN + Y+ L + +LA +LF ++K+ + ++
Sbjct: 481 LENAVLVMEEAMRKGFCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENARSFWR 540
Query: 577 LIAWY 581
W+
Sbjct: 541 SNGWH 545
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 21/189 (11%)
Query: 394 LKGQQLYDKSLEVYNSMLQNAIRPN----TIICNHILRVHCREGQFREALTLLEDFHEQG 449
L ++L+ ++V M+ + P+ TI + +RVH R A+ L E+ G
Sbjct: 161 LGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVH----YVRRAIELFEESESFG 216
Query: 450 INLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV 509
+ + S+N ++ +C+ S+ A + K N+ +Y+ +ISG++K EM
Sbjct: 217 VKCSTESFNALLRCLCERSHVSAAKSVF-NAKKGNIPFDSCSYNIMISGWSKLGEVEEME 275
Query: 510 ERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFP 569
+ + +EM G P+ +Y+ LI+G + I+ + ++FD +K KG P
Sbjct: 276 K------------VLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVP 323
Query: 570 DVVTYTVLI 578
D Y +I
Sbjct: 324 DANVYNAMI 332
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/300 (19%), Positives = 108/300 (36%), Gaps = 52/300 (17%)
Query: 270 GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEA 329
G V +Y +R L +++ + C+ + C + F + V A
Sbjct: 146 GVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRA 205
Query: 330 LEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL 389
+E+ EE +S S+N LL C++ V
Sbjct: 206 IELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVF--------------------- 244
Query: 390 CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQG 449
N KG +D YN M+ + G+ E +L++ E G
Sbjct: 245 --NAKKGNIPFDSC--SYNIMISG---------------WSKLGEVEEMEKVLKEMVESG 285
Query: 450 INLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV 509
+ SY+ +I + + ++E+ + + +P Y+ +I F + +F+
Sbjct: 286 FGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISAR-DFDES 344
Query: 510 ERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFP 569
R + R ++ C PNL TY+ L+ G K + A ++F+EM +G+ P
Sbjct: 345 MRYYRRMLDEECE-----------PNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLP 393
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/289 (21%), Positives = 123/289 (42%), Gaps = 44/289 (15%)
Query: 254 GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCF 313
GD+ +A ++ ++ G P V+TY + I G C G +D A +L +++ LNS +
Sbjct: 179 GDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTY 238
Query: 314 NAVIHGFCQRGAVNEALEVLEEMKSSR----TFPDVYSYNMLLNAFCKKGDVXXXXXXXX 369
+ ++ G C+ G + ALE+L EM+ P+ +Y +++ AFC+K V
Sbjct: 239 SRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCEKRRVEEALLVLD 298
Query: 370 XXXXCQIKPSIVNYTSLI---------------LLCK-NKLKGQQL-------------- 399
P+ V LI L+ K KL G L
Sbjct: 299 RMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRM 358
Query: 400 --YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSY 457
++++ +++ ML +RP+ + C+H+ R C ++ + L ++ ++ + + +
Sbjct: 359 KRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCFLLYQEIEKKDV---KSTI 415
Query: 458 NEIIHMI-----CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAK 501
+ IH + C++ A +L ML + + V + +I K
Sbjct: 416 DSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIEALKK 464
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 93/250 (37%), Gaps = 56/250 (22%)
Query: 322 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 381
Q +EAL VL + D +YN+++ F KGD+ + P ++
Sbjct: 142 QANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVI 201
Query: 382 NYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTL 441
YTS+I +C G+ +A L
Sbjct: 202 TYTSMI---------------------------------------NGYCNAGKIDDAWRL 222
Query: 442 LEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN----VLPGVVNYSTLIS 497
++ + LN +Y+ I+ +CK + ALEL+ M K + + P V Y+ +I
Sbjct: 223 AKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQ 282
Query: 498 GFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY-IDLAT 556
F ++ R + A + M GC+PN T LI G + D + +
Sbjct: 283 AFCEK------------RRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALS 330
Query: 557 QLFDEMKRKG 566
+L D++ + G
Sbjct: 331 KLIDKLVKLG 340
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 8/180 (4%)
Query: 399 LYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYN 458
L D++L V + + +T+ N ++R+ +G A L+++ G+ + +Y
Sbjct: 145 LADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYT 204
Query: 459 EIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMN 518
+I+ C A L M K + + V YS ++ G K +E L E
Sbjct: 205 SMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKE 264
Query: 519 VACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 578
L PN TYT +I FC+ ++ A + D M +G P+ VT VLI
Sbjct: 265 DGGGLIS--------PNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLI 316
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 12/158 (7%)
Query: 441 LLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 500
++E + ++ +N + ++ + + + AL ++ + + NV V Y+ +I FA
Sbjct: 117 VIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFA 176
Query: 501 KEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 560
+ ++N+A L +EM +G P++ TYT +I+G+C ID A +L
Sbjct: 177 DKG------------DLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAWRLAK 224
Query: 561 EMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
EM + + VTY+ ++ K G + +L EM+
Sbjct: 225 EMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEME 262
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 115/257 (44%), Gaps = 19/257 (7%)
Query: 243 NIHTYTIMMS-CGDIRLAAE---ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLV 298
N+ T I+++ C LA E +L K V Y IR + G +++A L+
Sbjct: 129 NVKTMRIVLTLCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLI 188
Query: 299 RKLHC-KLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 357
+++ C L+P + + ++I+G+C G +++A + +EM + +Y+ +L CK
Sbjct: 189 KEMDCVGLYP-DVITYTSMINGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCK 247
Query: 358 KGDVXXXXXXXXXXXXCQ----IKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQ 412
GD+ I P+ V YT +I C+ ++ +++L V + M
Sbjct: 248 SGDMERALELLAEMEKEDGGGLISPNAVTYTLVIQAFCE-----KRRVEEALLVLDRMGN 302
Query: 413 NAIRPNTIICNHILRVHCREGQFREALTLLED--FHEQGINLNQYSYNEIIHMICKESYP 470
PN + +++ + +AL+ L D G++L++ + + +I + +
Sbjct: 303 RGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLGGVSLSECFSSATVSLIRMKRWE 362
Query: 471 KMALELMPRMLKRNVLP 487
+ A ++ ML R V P
Sbjct: 363 E-AEKIFRLMLVRGVRP 378
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 9/211 (4%)
Query: 242 PNIHTYTIMMSCGDIRLAAEILGKIYRSGG-NPTVVTYGTYIRGLCECGYVDVAHKLVRK 300
P++ T+ I++S AE + + G P VVTY + I C+ ++ A+KL+ K
Sbjct: 212 PDLQTFNILLSGWKSSEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDK 271
Query: 301 LHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGD 360
+ + + + VI G G ++A EVL+EMK +PDV +YN + FC
Sbjct: 272 MREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARR 331
Query: 361 VXXXXXXXXXXXXCQIKPSIVNYTSL--ILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPN 418
+ + P+ Y +L N L +S E+Y ML N PN
Sbjct: 332 LGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDL------GRSWELYVRMLGNECLPN 385
Query: 419 TIICNHILRVHCREGQFREALTLLEDFHEQG 449
T C ++++ R + A+ L ED +G
Sbjct: 386 TQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 69/153 (45%), Gaps = 12/153 (7%)
Query: 448 QGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFE 507
+G+ + +YN +I + CK+ + A +L+ +M + P V+ Y+T+I G
Sbjct: 240 KGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLG------- 292
Query: 508 MVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 567
+ + A + +EM GC P++ Y I FC + A +L DEM +KG+
Sbjct: 293 -----LIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGL 347
Query: 568 FPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 600
P+ TY + +G +L+ M N
Sbjct: 348 SPNATTYNLFFRVLSLANDLGRSWELYVRMLGN 380
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 113/260 (43%), Gaps = 22/260 (8%)
Query: 308 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 367
++ CFNA++ CQ ++ +A V +K PD+ ++N+LL+ + +
Sbjct: 178 FDTACFNALLRTLCQEKSMTDARNVYHSLKHQFQ-PDLQTFNILLSGWKSSEEAEAFFEE 236
Query: 368 XXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHIL 426
+KP +V Y SLI + CK++ +K+ ++ + M + P+ I ++
Sbjct: 237 MKGKG---LKPDVVTYNSLIDVYCKDR-----EIEKAYKLIDKMREEEETPDVITYTTVI 288
Query: 427 RVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVL 486
GQ +A +L++ E G + +YN I C A +L+ M+K+ +
Sbjct: 289 GGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLS 348
Query: 487 PGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGF 546
P Y+ + ++ + L+ M CLPN + LI F
Sbjct: 349 PNATTYNLFFRVLS------------LANDLGRSWELYVRMLGNECLPNTQSCMFLIKMF 396
Query: 547 CKIDYIDLATQLFDEMKRKG 566
+ + +D+A +L+++M KG
Sbjct: 397 KRHEKVDMAMRLWEDMVVKG 416
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 102/236 (43%), Gaps = 9/236 (3%)
Query: 278 YGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMK 337
+ +R LC+ + A + L + P + FN ++ G+ + EA EEMK
Sbjct: 183 FNALLRTLCQEKSMTDARNVYHSLKHQFQP-DLQTFNILLSGW---KSSEEAEAFFEEMK 238
Query: 338 SSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQ 397
PDV +YN L++ +CK ++ + P ++ YT++I L GQ
Sbjct: 239 GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVI--GGLGLIGQ 296
Query: 398 QLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSY 457
DK+ EV M + P+ N +R C + +A L+++ ++G++ N +Y
Sbjct: 297 P--DKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTY 354
Query: 458 NEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLF 513
N ++ + + EL RML LP + LI F K +M RL+
Sbjct: 355 NLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMF-KRHEKVDMAMRLW 409
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 480 MLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTY 539
M + + P VV Y++LI + K+ RE+ A L +M P++ TY
Sbjct: 237 MKGKGLKPDVVTYNSLIDVYCKD------------REIEKAYKLIDKMREEEETPDVITY 284
Query: 540 TCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
T +I G I D A ++ EMK G +PDV Y I + R+G+ +KL EM
Sbjct: 285 TTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEM 342
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 16/142 (11%)
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRE 516
+N ++ +C+E A + LK P + ++ L+SG+ +
Sbjct: 183 FNALLRTLCQEKSMTDARNVY-HSLKHQFQPDLQTFNILLSGW---------------KS 226
Query: 517 MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTV 576
A A F+EM G P++ TY LID +CK I+ A +L D+M+ + PDV+TYT
Sbjct: 227 SEEAEAFFEEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTT 286
Query: 577 LIAWYHKHGRIGEKNKLFGEMK 598
+I G+ + ++ EMK
Sbjct: 287 VIGGLGLIGQPDKAREVLKEMK 308
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/412 (21%), Positives = 163/412 (39%), Gaps = 34/412 (8%)
Query: 107 REKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTL 166
R+ K+G+ ++ HGF + II T+ + +F D+ K + + E +
Sbjct: 142 RQAKYGALLQLHGFINQAGIAPNII-TYNL------IFQAYLDVR---KPEIALEHYKLF 191
Query: 167 LD-LP-HHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXX 224
+D P + S+ F +L+K SN LE A ++ G + ++L+
Sbjct: 192 IDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSD 251
Query: 225 XXXXXXXXXXLMET--GPLPNIHTYTIMMSCGDIRLAAEILGKIYRS--GGNPTV----V 276
L E G + + Y +M ++ + + Y G N V +
Sbjct: 252 ADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAM 311
Query: 277 TYGTYIRGLCECGYVDVAHKLVRKLHCKLHP-----LNSHCFNAVIHGFCQRGAVNEALE 331
Y + L E G D A KL + + +P +N FN +++G+C G EA+E
Sbjct: 312 AYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAME 371
Query: 332 VLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCK 391
V +M + PD S+N L+N C + +KP Y L+ C
Sbjct: 372 VFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCF 431
Query: 392 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 451
+ K D+ Y +M+++ +RPN + N + + G+ +A + D +
Sbjct: 432 KEGK----IDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF-DMMVSKLK 486
Query: 452 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ 503
++ +Y I+ + + L+++ ML + V S + F KE+
Sbjct: 487 MDDEAYKFIMRALSEAGRLDEMLKIVDEMLDDD----TVRVSEELQEFVKEE 534
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/366 (21%), Positives = 146/366 (39%), Gaps = 46/366 (12%)
Query: 264 GKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKL----HPLNSH--CFNAVI 317
G I ++G P ++TY + Y+DV + H KL PLN F ++
Sbjct: 154 GFINQAGIAPNIITYNLIFQA-----YLDVRKPEIALEHYKLFIDNAPLNPSIATFRILV 208
Query: 318 HGFCQRGAVNEALEVLEEM--KSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ 375
G + +A+E+ E+M K P VYSY M+ G V +
Sbjct: 209 KGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMM-------GCVKNSDADGVLKLYQE 261
Query: 376 IKPSIVNYTSLILLCKNKLKG---QQLYDKSLEVYNSML--QNAIRPNTIICNHILRVHC 430
+K + + ++ +KG +++ +++E Y + + +R + + N++L
Sbjct: 262 LKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALS 321
Query: 431 REGQFREALTLLEDFHEQ-------GINLNQYSYNEIIHMICKESYPKMALELMPRMLKR 483
G+F EAL L + ++ +NL ++N +++ C + A+E+ +M
Sbjct: 322 ENGKFDEALKLFDAVKKEHNPPRHLAVNLG--TFNVMVNGYCAGGKFEEAMEVFRQMGDF 379
Query: 484 NVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLI 543
P ++++ L++ + E A L+ EM P+ YTY L+
Sbjct: 380 KCSPDTLSFNNLMNQLCDNELLAE------------AEKLYGEMEEKNVKPDEYTYGLLM 427
Query: 544 DGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 603
D K ID + M + P++ Y L K G++ + F M + +
Sbjct: 428 DTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKM 487
Query: 604 LDDGIK 609
D+ K
Sbjct: 488 DDEAYK 493
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 144/334 (43%), Gaps = 51/334 (15%)
Query: 266 IYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGA 325
IY S P V I LC+ G + A RKL L + + VI G+ + G
Sbjct: 37 IYSSSSRPRVPQPEWLIGELCKVGKIAEA----RKLFDGLPERDVVTWTHVITGYIKLGD 92
Query: 326 VNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTS 385
+ EA E+ + + S + +V ++ +++ + + + + ++V++ +
Sbjct: 93 MREARELFDRVDSRK---NVVTWTAMVSGYLRSKQLSIAEMLFQEMP----ERNVVSWNT 145
Query: 386 LILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 445
+I + DK+LE+++ M + N + N +++ + G+ EA+ L E
Sbjct: 146 MI----DGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEAMNLFERM 197
Query: 446 HEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSN 505
+ + S+ ++ + K A L M +RN +++++ +I+G+A+
Sbjct: 198 PRRDV----VSWTAMVDGLAKNGKVDEARRLFDCMPERN----IISWNAMITGYAQNNRI 249
Query: 506 FE-------MVERLFT------------REMNVACALFQEMSRIGCLPNLYTYTCLIDGF 546
E M ER F REMN AC LF M N+ ++T +I G+
Sbjct: 250 DEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPE----KNVISWTTMITGY 305
Query: 547 CKIDYIDLATQLFDEMKRKG-IFPDVVTYTVLIA 579
+ + A +F +M R G + P+V TY +++
Sbjct: 306 VENKENEEALNVFSKMLRDGSVKPNVGTYVSILS 339
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/351 (19%), Positives = 151/351 (43%), Gaps = 44/351 (12%)
Query: 245 HTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCK 304
H T + GD+R A E+ ++ VVT+ + G + +A L +++ +
Sbjct: 82 HVITGYIKLGDMREARELFDRV---DSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPER 138
Query: 305 LHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXX 364
N +N +I G+ Q G +++ALE+ +EM ++ S+N ++ A ++G +
Sbjct: 139 ----NVVSWNTMIDGYAQSGRIDKALELFDEMPER----NIVSWNSMVKALVQRGRIDEA 190
Query: 365 XXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNH 424
+ +V++T+++ + L D++ +++ M + N I N
Sbjct: 191 MNLFERMP----RRDVVSWTAMV----DGLAKNGKVDEARRLFDCMPER----NIISWNA 238
Query: 425 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 484
++ + + + EA L + E+ S+N +I + A L RM ++N
Sbjct: 239 MITGYAQNNRIDEADQLFQVMPERDF----ASWNTMITGFIRNREMNKACGLFDRMPEKN 294
Query: 485 VLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCL-PNLYTYTCLI 543
V++++T+I+G+ + + N E A +F +M R G + PN+ TY ++
Sbjct: 295 ----VISWTTMITGYVENKENEE------------ALNVFSKMLRDGSVKPNVGTYVSIL 338
Query: 544 DGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
+ + Q+ + + + + + L+ Y K G + K+F
Sbjct: 339 SACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMF 389
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 30/200 (15%)
Query: 401 DKSLEVYN---SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSY 457
D+S++++N S+ ++ RP ++ C+ G+ EA L + E+ + ++
Sbjct: 25 DRSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDV----VTW 80
Query: 458 NEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREM 517
+I K + A EL R+ R VV ++ ++SG+ L ++++
Sbjct: 81 THVITGYIKLGDMREARELFDRVDSR---KNVVTWTAMVSGY------------LRSKQL 125
Query: 518 NVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVL 577
++A LFQEM N+ ++ +IDG+ + ID A +LFDEM + I V++ +
Sbjct: 126 SIAEMLFQEMPE----RNVVSWNTMIDGYAQSGRIDKALELFDEMPERNI----VSWNSM 177
Query: 578 IAWYHKHGRIGEKNKLFGEM 597
+ + GRI E LF M
Sbjct: 178 VKALVQRGRIDEAMNLFERM 197
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/385 (18%), Positives = 164/385 (42%), Gaps = 48/385 (12%)
Query: 168 DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXX 227
++P +V+ +N +I +A + ++ A ++F E +I S N ++K L
Sbjct: 134 EMPERNVVSWNTMIDGYAQSGRIDKALELFDEMP----ERNIVSWNSMVKALVQRGRIDE 189
Query: 228 XXXXXXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE 287
L E P ++ ++T M+ + +++ ++++ I G +
Sbjct: 190 AMN----LFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQ 245
Query: 288 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 347
+D A +L + + + + +N +I GF + +N+A + + M +V S
Sbjct: 246 NNRIDEADQLFQVMPER----DFASWNTMITGFIRNREMNKACGLFDRMPEK----NVIS 297
Query: 348 YNMLLNAFCK-KGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNK---LKGQQLYDKS 403
+ ++ + + K + +KP++ Y S++ C + ++GQQ++
Sbjct: 298 WTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIH--- 354
Query: 404 LEVYNSMLQNAI-RPNTIICNHILRVHCREGQFREALTLLEDFHEQGI--NLNQYSYNEI 460
++ ++ + N I+ + +L ++ + G+ A + ++ G+ + S+N +
Sbjct: 355 -----QLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDN----GLVCQRDLISWNSM 405
Query: 461 IHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVA 520
I + + K A+E+ +M K P V Y L+ FA S+ +VE+
Sbjct: 406 IAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLL--FA--CSHAGLVEK--------G 453
Query: 521 CALFQEMSRIGCLP-NLYTYTCLID 544
F+++ R LP YTCL+D
Sbjct: 454 MEFFKDLVRDESLPLREEHYTCLVD 478
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 93/197 (47%), Gaps = 25/197 (12%)
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
++ M ++ + +T N I+ C+ G+F EA + + G+ + +YN M+
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYN----MMI 56
Query: 466 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQ 525
+ S A +L M++R ++P + Y+++I G K+ + R+++ +C+
Sbjct: 57 RFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQ------ARKVSKSCS--- 107
Query: 526 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
T+ LI+G+CK + LF EM R+GI +V+TYT LI + + G
Sbjct: 108 ------------TFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVG 155
Query: 586 RIGEKNKLFGEMKANCI 602
+F EM +N +
Sbjct: 156 DFNTALDIFQEMVSNGV 172
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 99/240 (41%), Gaps = 64/240 (26%)
Query: 308 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 367
+++ +N +IHG C+ G +EA + + S PDV +YNM+
Sbjct: 12 MDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMM---------------- 55
Query: 368 XXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 427
+ ++SL ++ ++Y M++ + P+TI N ++
Sbjct: 56 -------------IRFSSL--------------GRAEKLYAEMIRRGLVPDTITYNSMIH 88
Query: 428 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 487
C++ + +A + ++ + ++N +I+ CK + K + L M +R ++
Sbjct: 89 GLCKQNKLAQA---------RKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVA 139
Query: 488 GVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 547
V+ Y+TLI GF + + N A +FQEM G + T+ ++ C
Sbjct: 140 NVITYTTLIHGFRQ------------VGDFNTALDIFQEMVSNGVYSSSITFRDILPQLC 187
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 66/153 (43%), Gaps = 26/153 (16%)
Query: 235 LMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
L+ +G P++ TY +M+ + A ++ ++ R G P +TY + I GLC+ + A
Sbjct: 40 LLISGLQPDVQTYNMMIRFSSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQA 99
Query: 295 HKLVRKLHCKLHPLNSHC--------------------------FNAVIHGFCQRGAVNE 328
K+ + +N +C + +IHGF Q G N
Sbjct: 100 RKVSKSCSTFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNT 159
Query: 329 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDV 361
AL++ +EM S+ + ++ +L C + ++
Sbjct: 160 ALDIFQEMVSNGVYSSSITFRDILPQLCSRKEL 192
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 105/516 (20%), Positives = 181/516 (35%), Gaps = 90/516 (17%)
Query: 111 FGSWVETH-GFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFEQFSTLLDL 169
F +W G+SH + I + +++ + AL + + + LLD
Sbjct: 68 FFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSAMDALFKQV----------KSNKILLDS 117
Query: 170 PHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXX 229
V+ LI + A V A + G E+H CN LL L
Sbjct: 118 S-----VYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLAGLT--------- 163
Query: 230 XXXXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECG 289
S G A ++ K+ G + + +G YI C
Sbjct: 164 ----------------------SDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSS 201
Query: 290 YVDVAHKLVRKLHCKLHPLNSHCFNAVI-HGFCQRGAVNEALEVLEEMKSSRTFPDVYSY 348
+ +LV ++ +N +I H C+ +A +LEE+++ PD +Y
Sbjct: 202 ETNQLLRLVDEVKKANLNINGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAY 261
Query: 349 NMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-------LCKNKLKGQQLYD 401
++ AF G++ + P +Y + IL L + K + +
Sbjct: 262 RVIAEAFVVTGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVS 321
Query: 402 KSLEVYNSMLQ------NAIRPNTII-----------------CNHILRVHCREGQFREA 438
+ N +L +A+ P++ + + + + CR +
Sbjct: 322 GKFPMDNDILDALIGSVSAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHL 381
Query: 439 LTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISG 498
+ E +G SY+ +I +CK + + + M K + P V Y+ LI
Sbjct: 382 IKAYELLSSKGYFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEA 441
Query: 499 FAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQL 558
K EM+ A L+ EM GC NL TY LI + + + +L
Sbjct: 442 CCKA----EMI--------RPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRL 489
Query: 559 FDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
FD+M +GI PD Y LI K +I ++F
Sbjct: 490 FDKMLERGIEPDETIYMSLIEGLCKETKIEAAMEVF 525
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/340 (21%), Positives = 127/340 (37%), Gaps = 50/340 (14%)
Query: 154 CKCDDSFEQFSTLLDLPH----HSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHI 209
CKC + F L +L + + + V+ + F L V + +G+
Sbjct: 234 CKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVVLKKKRKLGVA--P 291
Query: 210 RSCN---FLLKCLXXXXXXXXXXXXXXXLMETGPLPN--IHTYTIMMSCGDIRLAAEILG 264
RS + F+L + + P+ N + +S D A E L
Sbjct: 292 RSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDILDALIGSVSAVDPDSAVEFLV 351
Query: 265 KIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRG 324
+ +G P + T + LC D K L K + ++ +I C+ G
Sbjct: 352 YMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQSYSLMISFLCKAG 411
Query: 325 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYT 384
V E+ L+EMK PDV YN L+ A CK I+P+
Sbjct: 412 RVRESYTALQEMKKEGLAPDVSLYNALIEACCKAE---------------MIRPA----- 451
Query: 385 SLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLED 444
++L+D+ M + N N ++R EG+ E+L L +
Sbjct: 452 ------------KKLWDE-------MFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDK 492
Query: 445 FHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 484
E+GI ++ Y +I +CKE+ + A+E+ + ++R+
Sbjct: 493 MLERGIEPDETIYMSLIEGLCKETKIEAAMEVFRKCMERD 532
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 89/188 (47%), Gaps = 13/188 (6%)
Query: 401 DKSLEVYNSMLQN-AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 459
D++++ + + + I P+ + N +++ CR+G + L++ E+ + G + S+N
Sbjct: 174 DEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNT 233
Query: 460 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNV 519
++ + + M +N+ P + +Y++ + G + + FT +N
Sbjct: 234 LLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK--------FTDALN- 284
Query: 520 ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 579
L M G P+++TY LI + + ++ + ++EMK KG+ PD VTY +LI
Sbjct: 285 ---LIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIP 341
Query: 580 WYHKHGRI 587
K G +
Sbjct: 342 LLCKKGDL 349
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 127/291 (43%), Gaps = 26/291 (8%)
Query: 288 CGYVDVAHKL---VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF-P 343
G + AHKL + +L+C+ FNA++ + ++EA++ +E+ P
Sbjct: 135 SGMAEHAHKLFDEMPELNCER---TVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITP 191
Query: 344 DVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKS 403
D+ +YN ++ A C+KG + +P ++++ +L+ + ++L+ +
Sbjct: 192 DLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLL----EEFYRRELFVEG 247
Query: 404 LEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHM 463
+++ M + PN N +R R +F +AL L++ +GI+ + ++YN +I
Sbjct: 248 DRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITA 307
Query: 464 ICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACAL 523
++ + ++ M ++ + P V Y LI K+ +++ A +
Sbjct: 308 YRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKG------------DLDRAVEV 355
Query: 524 FQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIF---PDV 571
+E + L Y +++ ID ATQL K + F PD+
Sbjct: 356 SEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKNGKLQSYFRYLPDL 406
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/327 (21%), Positives = 130/327 (39%), Gaps = 21/327 (6%)
Query: 100 SLNWKIAREKKFGSWVETHGFSHSVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDS 159
S + K ++ K VE S FR + G++ LR+ + D+
Sbjct: 56 SNDAKDSKNSKLTQKVEKFKRSCESESFRQV------HGLYSAFIRRLREAKKFSTIDEV 109
Query: 160 FEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCL 219
Q+ D V +++ ++ + M EHAH++F + E ++S N LL
Sbjct: 110 L-QYQKKFDDIKSEDFVIRIML-LYGYSGMAEHAHKLFDEMPELNCERTVKSFNALLSAY 167
Query: 220 XXXXXXXXXXXXXXXLMET-GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPT 274
L E G P++ TY M+ G + I ++ ++G P
Sbjct: 168 VNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPD 227
Query: 275 VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 334
++++ T + ++ + K N +N+ + G + +AL +++
Sbjct: 228 LISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLID 287
Query: 335 EMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNK 393
MK+ PDV++YN L+ A+ ++ + P V Y LI LLCK
Sbjct: 288 VMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCK-- 345
Query: 394 LKGQQLYDKSLEVYNSMLQNAI--RPN 418
KG D+++EV +++ + RPN
Sbjct: 346 -KGD--LDRAVEVSEEAIKHKLLSRPN 369
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 80/191 (41%), Gaps = 27/191 (14%)
Query: 423 NHILRVHCREGQFREALTLLEDFHEQ-GINLNQYSYNEIIHMICKESYPKMALELMPRML 481
N +L + + EA+ ++ E+ GI + +YN +I +C++ L + +
Sbjct: 161 NALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELE 220
Query: 482 KRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCL-------P 534
K P +++++TL+ E + RE LF E RI L P
Sbjct: 221 KNGFEPDLISFNTLL-------------EEFYRRE------LFVEGDRIWDLMKSKNLSP 261
Query: 535 NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
N+ +Y + G + A L D MK +GI PDV TY LI Y + E K +
Sbjct: 262 NIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCY 321
Query: 595 GEMKANCILLD 605
EMK + D
Sbjct: 322 NEMKEKGLTPD 332
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 79/340 (23%), Positives = 143/340 (42%), Gaps = 39/340 (11%)
Query: 265 KIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRG 324
K++ + V Y + + GL CG ++ A +L R + +S + A+I G Q G
Sbjct: 195 KVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-----KDSVSWAAMIKGLAQNG 249
Query: 325 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYT 384
EA+E EMK D Y + +L A G + + I +
Sbjct: 250 LAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGS 309
Query: 385 SLI-LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLE 443
+LI + CK K Y K+ V++ M Q N + ++ + + G+ EA+ +
Sbjct: 310 ALIDMYCKCKC---LHYAKT--VFDRMKQK----NVVSWTAMVVGYGQTGRAEEAVKIFL 360
Query: 444 DFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYST----LISGF 499
D GI+ + Y+ + I S +LE + + + G+++Y T L++ +
Sbjct: 361 DMQRSGIDPDHYTLGQAISACANVS----SLEEGSQFHGKAITSGLIHYVTVSNSLVTLY 416
Query: 500 AKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLF 559
K + + RLF EMNV A+ ++T ++ + + QLF
Sbjct: 417 GK-CGDIDDSTRLFN-EMNVRDAV--------------SWTAMVSAYAQFGRAVETIQLF 460
Query: 560 DEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKA 599
D+M + G+ PD VT T +I+ + G + + + F M +
Sbjct: 461 DKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 102/490 (20%), Positives = 195/490 (39%), Gaps = 47/490 (9%)
Query: 123 SVNYFRIIIHTFAMAGMHLEVFALLRDIVGYCKCDDSFE----QFSTLLDLPHHSVLVFN 178
++ RII G+H +AL + ++ +C FE S + ++L++N
Sbjct: 45 TLQSLRIIHAQMIKIGLHNTNYALSK-LIEFCILSPHFEGLPYAISVFKTIQEPNLLIWN 103
Query: 179 VLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMET 238
+ + A +S A +++V ++GL + + F+LK +++
Sbjct: 104 TMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKL 163
Query: 239 GPLPN--IHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHK 296
G + +HT I M + RL E K++ + VV+Y I+G GY++ A K
Sbjct: 164 GCDLDLYVHTSLISMYVQNGRL--EDAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQK 221
Query: 297 LVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 356
L ++ K + +NA+I G+ + G EALE+ ++M + PD + +++A
Sbjct: 222 LFDEIPVK----DVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277
Query: 357 KKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDK--SLEVYNSMLQNA 414
+ G + ++ +LI LY K LE + +
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALI----------DLYSKCGELETACGLFERL 327
Query: 415 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 474
+ I N ++ + ++EAL L ++ G N + I+ +
Sbjct: 328 PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR 387
Query: 475 ELMPRMLKRNVLPGVVNYS----TLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI 530
+ + KR L GV N S +LI +AK + E ++F ++
Sbjct: 388 WIHVYIDKR--LKGVTNASSLRTSLIDMYAK-CGDIEAAHQVFNSILH------------ 432
Query: 531 GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEK 590
+L ++ +I GF D + LF M++ GI PD +T+ L++ G +
Sbjct: 433 ---KSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLG 489
Query: 591 NKLFGEMKAN 600
+F M +
Sbjct: 490 RHIFRTMTQD 499
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 84/198 (42%), Gaps = 20/198 (10%)
Query: 409 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKES 468
S+ + PN +I N + R H AL L G+ N Y++ ++ K
Sbjct: 89 SVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSK 148
Query: 469 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMS 528
K ++ +LK + +++LIS + + E ++F + +
Sbjct: 149 AFKEGQQIHGHVLKLGCDLDLYVHTSLISMYV-QNGRLEDAHKVFDKSPH---------- 197
Query: 529 RIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIG 588
++ +YT LI G+ YI+ A +LFDE+ K DVV++ +I+ Y + G
Sbjct: 198 -----RDVVSYTALIKGYASRGYIENAQKLFDEIPVK----DVVSWNAMISGYAETGNYK 248
Query: 589 EKNKLFGEMKANCILLDD 606
E +LF +M + D+
Sbjct: 249 EALELFKDMMKTNVRPDE 266
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 139/373 (37%), Gaps = 82/373 (21%)
Query: 250 MMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLC--------------------ECG 289
M+S G I G ++ + YG+ I GLC CG
Sbjct: 260 MLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCG 319
Query: 290 YVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 349
+++ A R++ ++ ++ +N +I G G +EA+ V +M+SS PD S
Sbjct: 320 FLNSA----RRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLR 375
Query: 350 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNS 409
LL A Q KP ++ + +++++
Sbjct: 376 SLLCA--------------------QTKPMALS-------------------QGMQIHSY 396
Query: 410 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 469
+++ + +CN +L ++ L EDF N + S+N I+ +
Sbjct: 397 IIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRN---NADSVSWNTILTACLQHEQ 453
Query: 470 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSR 529
P L L ML P + L+ G E S+ ++ ++ + +
Sbjct: 454 PVEMLRLFKLMLVSECEPDHITMGNLLRGCV-EISSLKLGSQVHCYSL-----------K 501
Query: 530 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 589
G P + LID + K + A ++FD M + DVV+++ LI Y + G E
Sbjct: 502 TGLAPEQFIKNGLIDMYAKCGSLGQARRIFDSMDNR----DVVSWSTLIVGYAQSGFGEE 557
Query: 590 KNKLFGEMKANCI 602
LF EMK+ I
Sbjct: 558 ALILFKEMKSAGI 570
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 119/286 (41%), Gaps = 35/286 (12%)
Query: 299 RKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK 358
RK+ ++ N + +I G+ + +E L + M++ T P+ +++ L ++
Sbjct: 148 RKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEE 207
Query: 359 G------DVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQ 412
G V + S++N L L C N K + L+DK+ EV
Sbjct: 208 GVGGRGLQVHTVVVKNGLDKTIPVSNSLIN---LYLKCGNVRKARILFDKT-EV------ 257
Query: 413 NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 472
+ + N ++ + G EAL + + L++ S+ +I K+
Sbjct: 258 ----KSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVI---------KL 304
Query: 473 ALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGC 532
L + VV Y L F + MV M A LF+E IGC
Sbjct: 305 CANLKELRFTEQLHCSVVKYGFL---FDQNIRTALMVAYSKCTAMLDALRLFKE---IGC 358
Query: 533 LPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 578
+ N+ ++T +I GF + D + A LF EMKRKG+ P+ TY+V++
Sbjct: 359 VGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVIL 404
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 150/354 (42%), Gaps = 45/354 (12%)
Query: 235 LMETGPLPNIHTYTIMMS----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY 290
L + P N+ ++T M+S C + A E+L + R P V TY + +R C G
Sbjct: 118 LFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRS-CN-GM 175
Query: 291 VDVAHKLVRKLHCKL--HPLNSHCF--NAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 346
DV R LHC + L S F +A+I F + G +AL V +EM + D
Sbjct: 176 SDV-----RMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTG----DAI 226
Query: 347 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEV 406
+N ++ F + TS++ C G L + ++
Sbjct: 227 VWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACT----GLALLELGMQA 282
Query: 407 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 466
+ +++ + I+ N ++ ++C+ G +AL + E+ + +++ +I + +
Sbjct: 283 HVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDV----ITWSTMISGLAQ 336
Query: 467 ESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQE 526
Y + AL+L RM P NY T++ G S+ ++E + F+
Sbjct: 337 NGYSQEALKLFERMKSSGTKP---NYITIV-GVLFACSHAGLLEDGWY--------YFRS 384
Query: 527 MSRI-GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 579
M ++ G P Y C+ID K +D A +L +EM+ + PD VT+ L+
Sbjct: 385 MKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECE---PDAVTWRTLLG 435
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/346 (18%), Positives = 145/346 (41%), Gaps = 33/346 (9%)
Query: 255 DIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFN 314
D+ A + + + G TY I+ V + + R L+ H N
Sbjct: 41 DLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVN 100
Query: 315 AVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXC 374
+I+ + + +N+A ++ ++M +V S+ +++A+ K
Sbjct: 101 VLINMYVKFNLLNDAHQLFDQMPQR----NVISWTTMISAYSKCKIHQKALELLVLMLRD 156
Query: 375 QIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQ 434
++P++ Y+S++ C + L+ +++ + + + + ++ V + G+
Sbjct: 157 NVRPNVYTYSSVLRSCNGMSDVRMLH-------CGIIKEGLESDVFVRSALIDVFAKLGE 209
Query: 435 FREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYST 494
+AL++ ++ + + +N II + S +ALEL RM +
Sbjct: 210 PEDALSVFDEM----VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKR------------ 253
Query: 495 LISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDL 554
+GF EQ+ V R T + + + + +L L+D +CK ++
Sbjct: 254 --AGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLED 311
Query: 555 ATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 600
A ++F++MK + DV+T++ +I+ ++G E KLF MK++
Sbjct: 312 ALRVFNQMKER----DVITWSTMISGLAQNGYSQEALKLFERMKSS 353
>AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 |
chr1:3363535-3366276 FORWARD LENGTH=913
Length = 913
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 156/393 (39%), Gaps = 45/393 (11%)
Query: 241 LPNIHTYTIMMSC----GDIRLAAEILGKIYRSGG-NPTVVTYGTYIRGLCECGYVDVAH 295
+PN+ +Y +++ G++ A E+ I + P+ VTY +GL + G + A
Sbjct: 213 VPNVVSYNQIINAHCDEGNVDEALEVYRHILANAPFAPSSVTYRHLTKGLVQAGRIGDAA 272
Query: 296 KLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAF 355
L+R++ K +S +N +I G+ G ++A+E +E+KS T D + +
Sbjct: 273 SLLREMLSKGQAADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYW 332
Query: 356 CKKGDVXXXXXXXXXXXXCQIK--PSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQN 413
+KG+ + + P N + L K D++ ++N ML N
Sbjct: 333 FEKGNDKEAMESYRSLLDKKFRMHPPTGNVLLEVFLKFGK------KDEAWALFNEMLDN 386
Query: 414 AIRPNTIICNH----ILRVHC-REGQFREALTLLEDFHEQGIN----LNQYSYNEIIHMI 464
PN + N I+ C + G+F EA+ + + + ++ Y I+
Sbjct: 387 HAPPNILSVNSDTVGIMVNECFKMGEFSEAINTFKKVGSKVTSKPFVMDYLGYCNIVTRF 446
Query: 465 CKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ---SNFEMVERLFTREMNV-- 519
C++ A + R++ ++ +I + K + +M++R+ + V
Sbjct: 447 CEQGMLTEAERFFAEGVSRSLPADAPSHRAMIDAYLKAERIDDAVKMLDRMVDVNLRVVA 506
Query: 520 --ACALFQEMSRIGCL----------------PNLYTYTCLIDGFCKIDYIDLATQLFDE 561
+F E+ + G L P+ Y ++ G C D +D A + E
Sbjct: 507 DFGARVFGELIKNGKLTESAEVLTKMGEREPKPDPSIYDVVVRGLCDGDALDQAKDIVGE 566
Query: 562 MKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
M R + V +I + K GR E K+
Sbjct: 567 MIRHNVGVTTVLREFIIEVFEKAGRREEIEKIL 599
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 74/172 (43%), Gaps = 15/172 (8%)
Query: 415 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQG-INLNQYSYNEIIHMICKESYPKMA 473
RP CN I+ R ++ E+++L + F +Q I N SYN+II+ C E A
Sbjct: 176 TRPTVFTCNAIIAAMYRAKRYSESISLFQYFFKQSNIVPNVVSYNQIINAHCDEGNVDEA 235
Query: 474 LELMPRMLKRNVL-PGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGC 532
LE+ +L P V Y L G + + A +L +EM G
Sbjct: 236 LEVYRHILANAPFAPSSVTYRHLTKGLVQ------------AGRIGDAASLLREMLSKGQ 283
Query: 533 LPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK-GIFPDVVTYTVLIAWYHK 583
+ Y LI G+ + D A + FDE+K K ++ +V T + W+ K
Sbjct: 284 AADSTVYNNLIRGYLDLGDFDKAVEFFDELKSKCTVYDGIVNATFMEYWFEK 335
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 79/397 (19%), Positives = 151/397 (38%), Gaps = 39/397 (9%)
Query: 173 SVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLK--CLXXXXXXXXXXX 230
++ V N L+ V + + L + +V+ + + + + + S N LLK CL
Sbjct: 301 NIYVINSLMNVNSHD--LGYTLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIY 358
Query: 231 XXXXLMETGPLPNIHTYT---IMMSCGDIRL---AAEILGKIYRSGGNPTVVTYGTYIRG 284
ME+ L + +T I+ D ++ A ++ + G P T+ + I
Sbjct: 359 KEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISA 418
Query: 285 LCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPD 344
G V+ A+ L ++ NS CFN ++H + + A + + K S
Sbjct: 419 CANAGLVEQANHLFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWKGSSVNES 478
Query: 345 VYSYNMLLNAFCKKGDV-------------XXXXXXXXXXXXCQIKPSIVNYTSLILLCK 391
+Y+ +++ ++ C KP+ Y L+ C
Sbjct: 479 LYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQASKRFC-FKPTTATYNILLKACG 537
Query: 392 NKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGIN 451
Y + E+ + M + PN I + ++ + G A+ +L H G
Sbjct: 538 TD------YYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAVRILRTMHSAGTR 591
Query: 452 LNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVER 511
+ +Y I + + K+A L M + + P V Y+TL+ +K S E+ +
Sbjct: 592 PDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKARSKYGSLLEVRQC 651
Query: 512 LFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 548
L A++Q+M G PN + LI+ +C+
Sbjct: 652 L---------AIYQDMRNAGYKPNDHFLKELIEEWCE 679
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/292 (22%), Positives = 120/292 (41%), Gaps = 14/292 (4%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEE---MKSSRTFP-DVYSYNMLLNAFCKKGDVXXXXXXX 368
+N ++ C G V+ A ++ +E M+SS D ++Y ++ F
Sbjct: 338 YNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVK 397
Query: 369 XXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRV 428
+ P+ ++SLI C N L +++ ++ ML + PN+ C +IL
Sbjct: 398 DDMKSVGVTPNTHTWSSLISACANA----GLVEQANHLFEEMLASGCEPNSQ-CFNILLH 452
Query: 429 HCREG-QFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMP-RMLKRNVL 486
C E Q+ A L + + +G ++N+ Y + I + S P + P ++ RN
Sbjct: 453 ACVEACQYDRAFRLFQSW--KGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSN 510
Query: 487 PGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGF 546
+ S F + + ++ + + L EM +G PN T++ LID
Sbjct: 511 SPYIQASKRFC-FKPTTATYNILLKACGTDYYRGKELMDEMKSLGLSPNQITWSTLIDMC 569
Query: 547 CKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
++ A ++ M G PDVV YT I ++ + LF EM+
Sbjct: 570 GGSGDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMR 621
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 105/260 (40%), Gaps = 30/260 (11%)
Query: 316 VIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ 375
+IHGF ++G + + E K P++Y +++ GD
Sbjct: 238 IIHGFGKKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIYEDLLKEN 297
Query: 376 IKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQF 435
IKP+I SL+ + + L +L+VY +M + + N +L+ C G+
Sbjct: 298 IKPNIYVINSLMNVNSHDLG------YTLKVYKNMQILDVTADMTSYNILLKTCCLAGR- 350
Query: 436 REALTLLEDFHEQG--------INLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 487
+ L +D +++ + L+ ++Y II + K AL++ M V P
Sbjct: 351 ---VDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTP 407
Query: 488 GVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFC 547
+S+LIS A N +VE+ A LF+EM GC PN + L+
Sbjct: 408 NTHTWSSLISACA----NAGLVEQ--------ANHLFEEMLASGCEPNSQCFNILLHACV 455
Query: 548 KIDYIDLATQLFDEMKRKGI 567
+ D A +LF K +
Sbjct: 456 EACQYDRAFRLFQSWKGSSV 475
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 95/232 (40%), Gaps = 22/232 (9%)
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
+++ F KKGD+ P++ ++I +C L G Y KS +Y +
Sbjct: 238 IIHGFGKKGDMVSVMTAYEACKQILDTPNMYICRTMIDVCG--LCGD--YVKSRYIYEDL 293
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
L+ I+PN + N ++ V+ + + L + ++ + + SYN ++ C
Sbjct: 294 LKENIKPNIYVINSLMNVNSHDLGY--TLKVYKNMQILDVTADMTSYNILLKTCCLAGRV 351
Query: 471 KMALEL---MPRMLKRNVLP-GVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQE 526
+A ++ RM +L Y T+I FA + A + +
Sbjct: 352 DLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFAD------------AKMWKWALKVKDD 399
Query: 527 MSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 578
M +G PN +T++ LI ++ A LF+EM G P+ + +L+
Sbjct: 400 MKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLASGCEPNSQCFNILL 451
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 90/204 (44%), Gaps = 12/204 (5%)
Query: 239 GPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVV----TYGTYIRGLCECGYVDVA 294
G NI T+ M+ C R E L + + +V+ +Y I G G V+ A
Sbjct: 241 GVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEA 300
Query: 295 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 354
+LV +H K + S+ +N +++G+ + G V + +E+ EM S P+ +Y +L+N
Sbjct: 301 ERLVLMMHDKKLRVESYLYNLIMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNG 360
Query: 355 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 414
CK G V + + Y++L C + DKSLEV M+++
Sbjct: 361 LCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSEECYR----VGMIDKSLEVVAEMIRDG 416
Query: 415 IRPNTIIC----NHILRVHCREGQ 434
P IC + + V+ +E Q
Sbjct: 417 FIPGATICERLADSLFEVNRKEAQ 440
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 85/184 (46%), Gaps = 15/184 (8%)
Query: 425 ILRVHCREGQFREALTLLEDFH-EQGINLNQYSYNEIIHMICKESYPKMALELMPRML-K 482
++ V C G+ A L+E+ +G+ N ++ +I C + + L+L+ +++ K
Sbjct: 216 VVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIG-CCVKRWDFEELDLVLKLMEK 274
Query: 483 RNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCL 542
+V+ + +Y LI GF E ERL + + R+ Y Y +
Sbjct: 275 ESVMLDLDSYKVLIDGFTS-YGKVEEAERL-------VLMMHDKKLRVES----YLYNLI 322
Query: 543 IDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCI 602
++G+ + ++ +L+ EM +G+ P+ TY VL+ K G++ E E++ N
Sbjct: 323 MNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEF 382
Query: 603 LLDD 606
+D+
Sbjct: 383 EIDE 386
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/267 (20%), Positives = 118/267 (44%), Gaps = 17/267 (6%)
Query: 331 EVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLC 390
E+LEE K R +++ + K G K S++++ +L+
Sbjct: 95 EILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALL--- 151
Query: 391 KNKLKGQQLYDKSLEVYNSMLQN-AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQG 449
+ + + +D E++N + +I+P+ + N +++ C + EA+ LL++ +G
Sbjct: 152 -SAYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKG 210
Query: 450 INLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMV 509
+ + ++N ++ + ++ E+ +M+++NV + Y+ + G A E + E+V
Sbjct: 211 LKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELV 270
Query: 510 ERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFP 569
LF E+ G P+++++ +I G +D A + E+ + G P
Sbjct: 271 N------------LFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRP 318
Query: 570 DVVTYTVLIAWYHKHGRIGEKNKLFGE 596
D T+ +L+ K G +LF E
Sbjct: 319 DKATFALLLPAMCKAGDFESAIELFKE 345
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 136/333 (40%), Gaps = 23/333 (6%)
Query: 275 VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNA-VIHGFCQRGAVNEALEVL 333
+ Y +R L + +++ + K ++ F A +I + + G A +V
Sbjct: 74 IAVYDRTVRRLVAAKRLHYVEEILEE-QKKYRDMSKEGFAARIISLYGKAGMFENAQKVF 132
Query: 334 EEMKSSRTFPDVYSYNMLLNAF--CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLC 390
EEM + V S+N LL+A+ KK DV IKP IV+Y +LI LC
Sbjct: 133 EEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGK-LSIKPDIVSYNTLIKALC 191
Query: 391 KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 450
+ + +++ + + + ++P+ + N +L +GQF + E+ +
Sbjct: 192 E-----KDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNV 246
Query: 451 NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVE 510
++ +YN + + E+ K + L + + P V +++ +I G E
Sbjct: 247 AIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEG------- 299
Query: 511 RLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPD 570
+M+ A A ++E+ + G P+ T+ L+ CK + A +LF E K
Sbjct: 300 -----KMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLVG 354
Query: 571 VVTYTVLIAWYHKHGRIGEKNKLFGEMKANCIL 603
T L+ K + E ++ K N L
Sbjct: 355 QTTLQQLVDELVKGSKREEAEEIVKIAKTNDFL 387
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 70/146 (47%), Gaps = 11/146 (7%)
Query: 460 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNV 519
II + K + A ++ M R+ V++++ L+S + + F++VE LF
Sbjct: 115 IISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAY-RLSKKFDVVEELFN----- 168
Query: 520 ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 579
+ ++ P++ +Y LI C+ D + A L DE++ KG+ PD+VT+ L+
Sbjct: 169 -----ELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLL 223
Query: 580 WYHKHGRIGEKNKLFGEMKANCILLD 605
+ G+ +++ +M + +D
Sbjct: 224 SSYLKGQFELGEEIWAKMVEKNVAID 249
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 85/205 (41%), Gaps = 4/205 (1%)
Query: 273 PTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEV 332
P +V+Y T I+ LCE + A L+ ++ K + FN ++ +G E+
Sbjct: 178 PDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEI 237
Query: 333 LEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 392
+M D+ +YN L + +KP + ++ ++I N
Sbjct: 238 WAKMVEKNVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSIN 297
Query: 393 KLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINL 452
+ K D++ Y ++++ RP+ +L C+ G F A+ L ++ + +
Sbjct: 298 EGK----MDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIELFKETFSKRYLV 353
Query: 453 NQYSYNEIIHMICKESYPKMALELM 477
Q + +++ + K S + A E++
Sbjct: 354 GQTTLQQLVDELVKGSKREEAEEIV 378
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/387 (21%), Positives = 151/387 (39%), Gaps = 73/387 (18%)
Query: 239 GPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
G PN H +SC GDI+ A + + R N T TY ++ + E + A
Sbjct: 137 GLQPNAHACNSFLSCLLRNGDIQKAFTVF-EFMRKKENVTGHTYSLMLKAVAEVKGCESA 195
Query: 295 HKLVRKLHCKLHPLNSHCFNAVIH----GFCQR-GAVNEALEVLEEMKSSRTFPDVYSYN 349
++ R+L + P CF+ V++ C R V E + MK +Y+
Sbjct: 196 LRMFREL--EREPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEITYS 253
Query: 350 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNS 409
+L++ F + G +I ++I C + K +D +L+++ S
Sbjct: 254 LLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEK----WDLALKIFQS 309
Query: 410 MLQNAIRPNTIICNHILRVHCREGQ----------------------------------- 434
ML+ ++PN + CN ++ + G+
Sbjct: 310 MLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYSVLKSLGHKPDEYTWNALLTALYKANR 369
Query: 435 FREALTLLEDFHEQGI-NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYS 493
+ + L L + + + LN+Y YN + K Y + A++L+ M + +Y+
Sbjct: 370 YEDVLQLFDMIRSENLCCLNEYLYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYN 429
Query: 494 TLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYID 553
+IS K +R+ VA +++ M++ C PN +TY L+ C
Sbjct: 430 LVISACEK------------SRKSKVALLVYEHMAQRDCKPNTFTYLSLVRS-C------ 470
Query: 554 LATQLFDEMKR--KGIFPDVVTYTVLI 578
+ L+DE++ K + PDV Y I
Sbjct: 471 IWGSLWDEVEDILKKVEPDVSLYNAAI 497
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 126/332 (37%), Gaps = 36/332 (10%)
Query: 275 VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 334
VT+ ++ C+ G +D A +R L ++ C + EA ++L+
Sbjct: 251 AVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLD 310
Query: 335 EMKSSRTFPDVYSYNMLLNAFCKKG---DVXXXXXXXXXXXXCQIKPSIVNYTSLI--LL 389
E+K T +YN+ + A K G + C+++ + Y S++ LL
Sbjct: 311 EIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELE--VFRYNSMVFQLL 368
Query: 390 CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQG 449
+N L G +YD + M+ + PN N L C+ G EAL L E G
Sbjct: 369 KENNLDG--VYD----ILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIG 422
Query: 450 INLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF---AKEQSNF 506
SYN +IH +C + A +++ + R G +STL + K
Sbjct: 423 FAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMAR 482
Query: 507 EMV----ERLFTREMNVACALFQEMSRIGCLPN----------------LYTYTCLIDGF 546
E+V ER + C + + +G + + +T LI G
Sbjct: 483 ELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGS 542
Query: 547 CKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 578
+ D+A +L M+ KG P Y +I
Sbjct: 543 ITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVI 574
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/319 (20%), Positives = 122/319 (38%), Gaps = 22/319 (6%)
Query: 265 KIYRS----GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGF 320
++YRS G PT ++Y I LC V+ A+ +++ + H L F+ + +
Sbjct: 413 ELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNAL 472
Query: 321 CQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSI 380
C +G + A E++ P + +++A C G V + S
Sbjct: 473 CWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTSF 532
Query: 381 VNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR-EGQFREAL 439
+TSLI ++G D + ++ M + P + ++++ C E +
Sbjct: 533 KMFTSLIYGSITLMRG----DIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFF 588
Query: 440 TLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGF 499
T L F +YN I PK+A + M + + P V + ++ +
Sbjct: 589 TTLLKFQLSLWEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSY 648
Query: 500 AKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLF 559
K + ++ A F ++ G Y +I G CK + +D A
Sbjct: 649 LKNE------------KIADALHFFHDLREQGKTKK-RLYQVMIVGLCKANKLDDAMHFL 695
Query: 560 DEMKRKGIFPDVVTYTVLI 578
+EMK +G+ P + Y V I
Sbjct: 696 EEMKGEGLQPSIECYEVNI 714
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 79/189 (41%), Gaps = 12/189 (6%)
Query: 410 MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 469
M + I+PN+ ++ E + E +L ++G+N+ +YN I +CK
Sbjct: 213 MERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKK 272
Query: 470 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSR 529
K A L+ ML + P V YS LI GF E +FE ++LF + M
Sbjct: 273 SKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNED-DFEEAKKLF-----------KIMVN 320
Query: 530 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 589
GC P+ Y LI CK + A L E K P L+ K ++ E
Sbjct: 321 RGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEE 380
Query: 590 KNKLFGEMK 598
+L G++K
Sbjct: 381 AKELIGQVK 389
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 101/256 (39%), Gaps = 45/256 (17%)
Query: 270 GGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEA 329
G P + TY I+ CE G ++ +V ++ K NS F +I GF +E
Sbjct: 182 GIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEV 241
Query: 330 LEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL 389
+VL MK V +YN+ + + CK+
Sbjct: 242 GKVLAMMKDRGVNIGVSTYNIRIQSLCKR------------------------------- 270
Query: 390 CKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQG 449
K + + L D ML ++PNT+ +H++ C E F EA L + +G
Sbjct: 271 -KKSKEAKALLD-------GMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRG 322
Query: 450 INLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFE-- 507
+ Y +I+ +CK + AL L +++N +P +L++G AK+ E
Sbjct: 323 CKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAK 382
Query: 508 ----MVERLFTREMNV 519
V+ FTR + +
Sbjct: 383 ELIGQVKEKFTRNVEL 398
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 78/187 (41%), Gaps = 13/187 (6%)
Query: 400 YDKSLEVYNSMLQN-AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYN 458
Y ++ VY M + I P+ N +++V C G + +++ + +GI N S+
Sbjct: 167 YKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFG 226
Query: 459 EIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMN 518
+I E +++ M R V GV Y+ I K + + E
Sbjct: 227 LMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKE----------- 275
Query: 519 VACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 578
A AL M G PN TY+ LI GFC D + A +LF M +G PD Y LI
Sbjct: 276 -AKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLI 334
Query: 579 AWYHKHG 585
+ K G
Sbjct: 335 YYLCKGG 341
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 114/286 (39%), Gaps = 12/286 (4%)
Query: 181 IKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLL-KCLXXXXXXXXXXXXXXXLMETG 239
I ++A +ML+H+ +VF + + ++S N LL CL G
Sbjct: 123 IVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYG 182
Query: 240 PLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAH 295
P++ TY M+ G + I+ ++ R G P ++G I G D
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 296 KLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAF 355
K++ + + + +N I C+R EA +L+ M S+ P+ +Y+ L++ F
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 356 CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLI-LLCKNKLKGQQLYDKSLEVYNSMLQNA 414
C + D KP Y +LI LCK G ++ +L + ++
Sbjct: 303 CNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKG---GD--FETALSLCKESMEKN 357
Query: 415 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEI 460
P+ I ++ ++ + EA L+ E+ N +NE+
Sbjct: 358 WVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEK-FTRNVELWNEV 402
>AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4013166-4014630 REVERSE
LENGTH=367
Length = 367
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 88/191 (46%), Gaps = 8/191 (4%)
Query: 287 ECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 346
+C Y+ L++++ P N +I F + +++ L +L+EMK PDV
Sbjct: 157 DCTYL---TSLLKEISESSLPYRLIVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVI 213
Query: 347 SYNMLLNAFCKKGDVXXXX-XXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLE 405
+YN +L+ + G V C + +I+ Y +++ N ++ +D L
Sbjct: 214 TYNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVL----NGMRKACRFDMCLV 269
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
+YN M+Q I P+ + ++ R G +E+L L ++ ++ I + Y Y +I +
Sbjct: 270 IYNEMVQCGIEPDLLSYTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLK 329
Query: 466 KESYPKMALEL 476
K + AL+L
Sbjct: 330 KSGDFQSALQL 340
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 13/180 (7%)
Query: 420 IICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPR 479
I+ N I+ Q + L +L++ E + +YN ++ ++ + L ++
Sbjct: 178 IVMNRIIFAFAETRQIDKVLMILKEMKEWECKPDVITYNSVLDILGRAGLVNEILGVLST 237
Query: 480 MLKR-NVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYT 538
M + +V ++ Y+T+++G K F+M ++ EM + G P+L +
Sbjct: 238 MKEDCSVSVNIITYNTVLNGMRK-ACRFDM-----------CLVIYNEMVQCGIEPDLLS 285
Query: 539 YTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
YT +ID + + + +LFDEMK++ I P V Y LI K G +L E+K
Sbjct: 286 YTAVIDSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKKSGDFQSALQLSDELK 345
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 5/134 (3%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFP-DVYSYNMLLNAFCKKGDVXXXXXXXXXX 371
+N+V+ + G VNE L VL MK + ++ +YN +LN K
Sbjct: 215 YNSVLDILGRAGLVNEILGVLSTMKEDCSVSVNIITYNTVLNGMRKACRFDMCLVIYNEM 274
Query: 372 XXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 431
C I+P +++YT++I + L +SL +++ M Q IRP+ + ++ +
Sbjct: 275 VQCGIEPDLLSYTAVI----DSLGRSGNVKESLRLFDEMKQRQIRPSVYVYRALIDCLKK 330
Query: 432 EGQFREALTLLEDF 445
G F+ AL L ++
Sbjct: 331 SGDFQSALQLSDEL 344
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 111/277 (40%), Gaps = 11/277 (3%)
Query: 180 LIKVFASNSMLEHAHQVFVSA-KNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMET 238
+I+ + N ++ A ++F K +G + + N LL L ++
Sbjct: 152 IIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRK 211
Query: 239 GPLPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
G P+ TY I++ S G ++ A E L ++ R G NP I GL GY++ A
Sbjct: 212 GLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESA 271
Query: 295 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 354
++V K+ + FN +I + G V +E+ D+ +Y L+ A
Sbjct: 272 KEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPA 331
Query: 355 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKLKGQQLYDKSLEVYNSMLQN 413
K G + KP Y +I +C+N + +D + ++ M
Sbjct: 332 VSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGM-----FDDAFSFFSDMKVK 386
Query: 414 AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGI 450
A PN + ++ + R G+F +A L + E G+
Sbjct: 387 AHPPNRPVYTMLITMCGRGGKFVDAANYLVEMTEMGL 423
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 85/205 (41%), Gaps = 4/205 (1%)
Query: 259 AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIH 318
A ++ ++ R G P TY + G C G + A + + ++ + + + +I
Sbjct: 201 AYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIE 260
Query: 319 GFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKP 378
G G + A E++ +M PD+ ++N+L+ A K G+V +
Sbjct: 261 GLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCV 320
Query: 379 SIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREA 438
I Y +LI K D++ + N+ +++ +P + I++ CR G F +A
Sbjct: 321 DIDTYKTLIPAVSKIGK----IDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDA 376
Query: 439 LTLLEDFHEQGINLNQYSYNEIIHM 463
+ D + N+ Y +I M
Sbjct: 377 FSFFSDMKVKAHPPNRPVYTMLITM 401
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 12/131 (9%)
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRE 516
YN ++H +C A L+ RM+++ + P Y+ L++G+ +
Sbjct: 185 YNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCS------------AGK 232
Query: 517 MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTV 576
M A EMSR G P LI+G Y++ A ++ +M + G PD+ T+ +
Sbjct: 233 MKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNI 292
Query: 577 LIAWYHKHGRI 587
LI K G +
Sbjct: 293 LIEAISKSGEV 303
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 89/223 (39%), Gaps = 23/223 (10%)
Query: 398 QLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSY 457
+++ + + M++ ++P+ ++ C G+ +EA L++ +G N
Sbjct: 196 KMFHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGR 255
Query: 458 NEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTR-- 515
+ +I + Y + A E++ +M K +P + ++ LI +K +E +T
Sbjct: 256 DLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACK 315
Query: 516 -----EMNVACALFQEMSRIGCLPNLYT----------------YTCLIDGFCKIDYIDL 554
+++ L +S+IG + + Y +I G C+ D
Sbjct: 316 LGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDD 375
Query: 555 ATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
A F +MK K P+ YT+LI + G+ + EM
Sbjct: 376 AFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAANYLVEM 418
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 157/373 (42%), Gaps = 78/373 (20%)
Query: 275 VVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE 334
V++ I G C+ G VD A L RK+ K +S A++ G + ++EA VL
Sbjct: 167 AVSWSAMITGFCQNGEVDSAVVLFRKMPVK----DSSPLCALVAGLIKNERLSEAAWVLG 222
Query: 335 EMKS--SRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKN 392
+ S S VY+YN L+ + ++G Q++ + + + LC +
Sbjct: 223 QYGSLVSGREDLVYAYNTLIVGYGQRG---------------QVEAARCLFDQIPDLCGD 267
Query: 393 KLKGQ--QLYDKSLEVYNSMLQNAIR----------------PNTIICNHILRVHCREGQ 434
G+ + + K++ +NSM++ ++ +TI N ++ + +
Sbjct: 268 DHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSR 327
Query: 435 FREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMA-LELMPRMLKRNVLPGVVNYS 493
+A L + N + +S+N ++ Y + +EL ++ V+++
Sbjct: 328 MEDAFALFSEMP----NRDAHSWNMMV-----SGYASVGNVELARHYFEKTPEKHTVSWN 378
Query: 494 TLISGFAKEQSNFEMVERLFTREMN---------------------VACALFQEMSRI-- 530
++I+ + K + E V+ LF R MN V L +M +I
Sbjct: 379 SIIAAYEKNKDYKEAVD-LFIR-MNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVV 436
Query: 531 -GCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 589
+P++ + LI + + I + ++FDEMK K +V+T+ +I Y HG E
Sbjct: 437 KTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLK---REVITWNAMIGGYAFHGNASE 493
Query: 590 KNKLFGEMKANCI 602
LFG MK+N I
Sbjct: 494 ALNLFGSMKSNGI 506
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 151/372 (40%), Gaps = 58/372 (15%)
Query: 243 NIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLH 302
N T+ M+S R K++ VVT+ T I G CG + + RKL
Sbjct: 70 NTVTWNTMISGYVKRREMNQARKLFDVMPKRDVVTWNTMISGYVSCGGIRFLEE-ARKLF 128
Query: 303 CKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVX 362
++ +S +N +I G+ + + EAL + E+M + S++ ++ FC+ G+V
Sbjct: 129 DEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMPER----NAVSWSAMITGFCQNGEVD 184
Query: 363 XXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKS--LEVYNSMLQNAIRPNTI 420
K + + + L L +K ++L + + L Y S++ R + +
Sbjct: 185 SAVVLFR-------KMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSG--REDLV 235
Query: 421 ICNHILRV-HCREGQFREALTLLE------------DFHEQGINLNQYSYNEIIHMICKE 467
+ L V + + GQ A L + +F E+ N S+N +I K
Sbjct: 236 YAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCK-NVVSWNSMIKAYLKV 294
Query: 468 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEM 527
A L +M R+ ++++T+I G+ + M A ALF EM
Sbjct: 295 GDVVSARLLFDQMKDRD----TISWNTMIDGY------------VHVSRMEDAFALFSEM 338
Query: 528 SRIGCLPN--LYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
PN +++ ++ G+ + ++LA F++ K V++ +IA Y K+
Sbjct: 339 ------PNRDAHSWNMMVSGYASVGNVELARHYFEKTPEK----HTVSWNSIIAAYEKNK 388
Query: 586 RIGEKNKLFGEM 597
E LF M
Sbjct: 389 DYKEAVDLFIRM 400
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 116/287 (40%), Gaps = 21/287 (7%)
Query: 150 IVGYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHI 209
I GY + F+ ++P+ +N+++ +AS +E A F E H
Sbjct: 319 IDGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTP----EKHT 374
Query: 210 RSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCG----DIRLAAEILGK 265
S N ++ + G P+ HT T ++S ++RL + + +
Sbjct: 375 VSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQ-MHQ 433
Query: 266 IYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGA 325
I P V + I CG + + ++ ++ K + +NA+I G+ G
Sbjct: 434 IVVKTVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVI---TWNAMIGGYAFHGN 490
Query: 326 VNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXC-QIKPSIVNYT 384
+EAL + MKS+ +P ++ +LNA G V +I+P + +Y+
Sbjct: 491 ASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYS 550
Query: 385 SLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR 431
SL+ N GQ +++++ + SM P+ + +L CR
Sbjct: 551 SLV----NVTSGQGQFEEAMYIITSM---PFEPDKTVWGALLDA-CR 589
>AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: COG4 transport (InterPro:IPR013167),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Pentatricopeptide
repeat (PPR) superfamily protein (TAIR:AT5G46100.1); Has
26268 Blast hits to 8959 proteins in 289 species: Archae
- 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants -
25350; Viruses - 0; Other Eukaryotes - 446 (source: NCBI
BLink). | chr4:573098-577243 REVERSE LENGTH=1110
Length = 1110
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 17/193 (8%)
Query: 398 QLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCR-EGQFREALTLLEDFHEQGINLNQYS 456
+L +K L + ML+ P N IL V G ++A L + G+ N S
Sbjct: 133 KLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRS 192
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRE 516
YN ++ C +A +L +ML+R+V+P V +Y LI GF ++ +
Sbjct: 193 YNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKG------------Q 240
Query: 517 MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTV 576
+N A L +M G +P+ LI G C D + +EM KG P
Sbjct: 241 VNGAMELLDDMLNKGFVPD----RTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNC 296
Query: 577 LIAWYHKHGRIGE 589
L+ + G++ E
Sbjct: 297 LVKGFCSFGKVEE 309
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 12/182 (6%)
Query: 289 GYVDVAHKLVRKLHCKLHPL--NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVY 346
GY+ A +L + +LH + N+ +N ++ FC ++ A ++ +M PDV
Sbjct: 169 GYLQKAFELFKS--SRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVD 226
Query: 347 SYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEV 406
SY +L+ FC+KG V P + T + LC Q ++D+ +
Sbjct: 227 SYKILIQGFCRKGQVNGAMELLDDMLNKGFVP---DRTLIGGLCD-----QGMFDEGKKY 278
Query: 407 YNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICK 466
M+ P+ + N +++ C G+ EA ++E + G L+ ++ +I +IC
Sbjct: 279 LEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICN 338
Query: 467 ES 468
E
Sbjct: 339 ED 340
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 12/178 (6%)
Query: 170 PHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXX 229
P H + +VL+ + L+ A ++F S++ G+ + RS N L++
Sbjct: 154 PKHLNRILDVLV---SHRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAY 210
Query: 230 XXXXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGL 285
++E +P++ +Y I++ G + A E+L + G P T I GL
Sbjct: 211 QLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPD----RTLIGGL 266
Query: 286 CECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLE-EMKSSRTF 342
C+ G D K + ++ K + N ++ GFC G V EA +V+E MK+ T
Sbjct: 267 CDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETL 324
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 520 ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIA 579
A LF+ G +PN +Y L+ FC D + +A QLF +M + + PDV +Y +LI
Sbjct: 174 AFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQ 233
Query: 580 WYHKHGRIGEKNKLFGEM 597
+ + G++ +L +M
Sbjct: 234 GFCRKGQVNGAMELLDDM 251
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 97/471 (20%), Positives = 183/471 (38%), Gaps = 56/471 (11%)
Query: 138 GMHLEVFALLRDIVGYCKCD--DSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQ 195
G +VF I Y KC S L LP +++ + ++ +A N A +
Sbjct: 149 GFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALE 208
Query: 196 VFVSAKNVGLE---LHIRSCNFLLKCLXXXXXXXXXXXXXXXL-METGPLPNIHTYTIMM 251
+F + + ++ + + S CL + +E P I T+
Sbjct: 209 IFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYA 268
Query: 252 SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGY----VDVAHKLVRKLHCKLHP 307
CG + A + K+ +P ++ + I G + GY +D+ H+++ K + P
Sbjct: 269 KCGQVATAKILFDKM----KSPNLILWNAMISGYAKNGYAREAIDMFHEMINK---DVRP 321
Query: 308 LNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXX 367
++ + I Q G++ +A + E + S DV+ + L++ F K G V
Sbjct: 322 -DTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLV 380
Query: 368 XXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLE---VYNSMLQNAIRPNTIICNH 424
+ +V ++++I+ G L+ ++ E +Y +M + + PN +
Sbjct: 381 FDRT----LDRDVVVWSAMIV-------GYGLHGRAREAISLYRAMERGGVHPNDVTFLG 429
Query: 425 ILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRN 484
+L G RE + IN Q Y +I ++ + + A E++ M
Sbjct: 430 LLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCM---P 486
Query: 485 VLPGVVNYSTLISGFAKEQSNFEMVE----RLFTREMNVACALFQEMSRIGCLPNLYTYT 540
V PGV + L+S K+ + E+ E +LF+ + + Q L NLY
Sbjct: 487 VQPGVTVWGALLSA-CKKHRHVELGEYAAQQLFSIDPSNTGHYVQ-------LSNLYAAA 538
Query: 541 CLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKN 591
L D ++ MK KG+ DV V + + R+G+K+
Sbjct: 539 RLWDRVAEVRV---------RMKEKGLNKDVGCSWVEVRGRLEAFRVGDKS 580
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/343 (20%), Positives = 131/343 (38%), Gaps = 61/343 (17%)
Query: 264 GKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQR 323
+++R G + V I +C + A + L + S + A++ + Q
Sbjct: 143 AQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVS--WTAIVSAYAQN 200
Query: 324 GAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNY 383
G EALE+ +M+ PD + +LNAF
Sbjct: 201 GEPMEALEIFSQMRKMDVKPDWVALVSVLNAFT--------------------------- 233
Query: 384 TSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLE 443
C LK +S+ + I P+ +I + + C GQ A L +
Sbjct: 234 ------CLQDLK----QGRSIHASVVKMGLEIEPDLLISLNTMYAKC--GQVATAKILFD 281
Query: 444 DFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQ 503
+ L +N +I K Y + A+++ M+ ++V P ++ ++ IS A+
Sbjct: 282 KMKSPNLIL----WNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 504 SNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMK 563
S + A ++++ + R +++ + LID F K ++ A +FD
Sbjct: 338 S------------LEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFD--- 382
Query: 564 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 606
+ + DVV ++ +I Y HGR E L+ M+ + +D
Sbjct: 383 -RTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPND 424
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 88/176 (50%), Gaps = 6/176 (3%)
Query: 290 YVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYN 349
Y+ L +++ ++ N +I + + V+EA+ V +EM + P+ Y+Y+
Sbjct: 203 YLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYS 262
Query: 350 MLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTS-LILLCKNKLKGQQLYDKSLEVYN 408
L+ C+KG V Q+K + N + ++L+C L ++ D+++EV
Sbjct: 263 YLVKGVCEKGRVGQGLGFYKEM---QVKGMVPNGSCYMVLICS--LSMERRLDEAVEVVY 317
Query: 409 SMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMI 464
ML N++ P+ + N +L CR G+ EAL ++E++ ++ + + +Y ++ +
Sbjct: 318 DMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMDEV 373
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 51/107 (47%)
Query: 253 CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHC 312
C ++ A + ++ G P TY ++G+CE G V +++ K N C
Sbjct: 236 CLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSC 295
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKG 359
+ +I ++EA+EV+ +M ++ PD+ +YN +L C+ G
Sbjct: 296 YMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLTELCRGG 342
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 59/130 (45%), Gaps = 12/130 (9%)
Query: 476 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPN 535
L +M V+P + +I +AK E++ A +F+EM+ G PN
Sbjct: 210 LTKQMKSNGVIPDTFVLNMIIKAYAK------------CLEVDEAIRVFKEMALYGSEPN 257
Query: 536 LYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFG 595
YTY+ L+ G C+ + + EM+ KG+ P+ Y VLI R+ E ++
Sbjct: 258 AYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVY 317
Query: 596 EMKANCILLD 605
+M AN + D
Sbjct: 318 DMLANSLSPD 327
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 131/330 (39%), Gaps = 42/330 (12%)
Query: 265 KIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRG 324
+ +RSG T I + G + A ++ ++ + P+ +NA+I G+ +RG
Sbjct: 107 QFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPV----WNAMITGYQRRG 162
Query: 325 AVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ-IKPSIVNY 383
+ A+E+ + M +V S+ +++ F + G+ + +KP+ +
Sbjct: 163 DMKAAMELFDSMPRK----NVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITV 218
Query: 384 TSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLE 443
S++ C N G+ + LE Y +N N +CN + ++ + G A L
Sbjct: 219 VSVLPACANL--GELEIGRRLEGYAR--ENGFFDNIYVCNATIEMYSKCGMIDVAKRL-- 272
Query: 444 DFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISG----- 498
F E G N S+N +I + AL L +ML+ P V + L+
Sbjct: 273 -FEELGNQRNLCSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGG 331
Query: 499 -FAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 557
K Q F+ +E E+ +I P L Y C+ID ++ + A
Sbjct: 332 MVVKGQELFKSME---------------EVHKIS--PKLEHYGCMIDLLGRVGKLQEAYD 374
Query: 558 LFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 587
L M K PD V + L+ HG +
Sbjct: 375 LIKTMPMK---PDAVVWGTLLGACSFHGNV 401
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/377 (19%), Positives = 160/377 (42%), Gaps = 43/377 (11%)
Query: 239 GPL-PNIHTYTIMMS-----CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVD 292
GP+ P+ +++T ++ CG +I G +SG V T + GY +
Sbjct: 134 GPVFPDKYSFTFVLKACAAFCG-FEEGRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFE 192
Query: 293 VAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLL 352
+A K++ ++ + ++ +N+++ + ++G V+EA + +EM+ +V S+N ++
Sbjct: 193 IARKVLDRMPVR----DAVSWNSLLSAYLEKGLVDEARALFDEMEER----NVESWNFMI 244
Query: 353 NAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQ 412
+ + G V +V++ +++ + Y++ LEV+N ML
Sbjct: 245 SGYAAAGLVKEAKEVFDSMPV----RDVVSWNAMVTAYAH----VGCYNEVLEVFNKMLD 296
Query: 413 NAI-RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK 471
++ +P+ +L G + + + GI + + ++ M K
Sbjct: 297 DSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKID 356
Query: 472 MALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIG 531
ALE+ KR+ V ++++IS + + +E +F EM G
Sbjct: 357 KALEVFRATSKRD----VSTWNSIISDLSVHGLGKDALE------------IFSEMVYEG 400
Query: 532 CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR-KGIFPDVVTYTVLIAWYHKHGRIGEK 590
PN T+ ++ + +D A +LF+ M + P + Y ++ + G+I E
Sbjct: 401 FKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEA 460
Query: 591 NKLFGEMKAN--CILLD 605
+L E+ A+ ILL+
Sbjct: 461 EELVNEIPADEASILLE 477
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 145/355 (40%), Gaps = 71/355 (20%)
Query: 253 CGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHC 312
C ++ ++ +I R + + I L C ++A VR + P N H
Sbjct: 29 CANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLA---VRVFNQVQEP-NVHL 84
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
N++I Q +A V EM+ F D ++Y LL A
Sbjct: 85 CNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKA------------------ 126
Query: 373 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 432
C GQ ++N + + + + + N ++ + R
Sbjct: 127 -CS--------------------GQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYSRC 165
Query: 433 GQF--REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVV 490
G R+A+ L E E+ + S+N ++ + K + A L M +R+ ++
Sbjct: 166 GGLGVRDAMKLFEKMSER----DTVSWNSMLGGLVKAGELRDARRLFDEMPQRD----LI 217
Query: 491 NYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKID 550
+++T++ G+A+ REM+ A LF++M N +++ ++ G+ K
Sbjct: 218 SWNTMLDGYAR------------CREMSKAFELFEKMPE----RNTVSWSTMVMGYSKAG 261
Query: 551 YIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLD 605
+++A +FD+M +VVT+T++IA Y + G + E ++L +M A+ + D
Sbjct: 262 DMEMARVMFDKMPLPA--KNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFD 314
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/344 (15%), Positives = 142/344 (41%), Gaps = 44/344 (12%)
Query: 250 MMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLN 309
++ G++R A + ++ + ++++ T + G C + A +L K+ + N
Sbjct: 195 LVKAGELRDARRLFDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPER----N 246
Query: 310 SHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXX 369
+ ++ ++ G+ + G + A + ++M +V ++ +++ + +KG +
Sbjct: 247 TVSWSTMVMGYSKAGDMEMARVMFDKMPLPAK--NVVTWTIIIAGYAEKGLLKEADRLVD 304
Query: 370 XXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVH 429
+K S++ C L + +++ + ++ + N + N +L ++
Sbjct: 305 QMVASGLKFDAAAVISILAACTE----SGLLSLGMRIHSILKRSNLGSNAYVLNALLDMY 360
Query: 430 CREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGV 489
+ G ++A + D ++ + S+N ++H + + K A+EL RM + + P
Sbjct: 361 AKCGNLKKAFDVFNDIPKKDL----VSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDK 416
Query: 490 VNYSTLI-----SGFAKEQSNFEMVERLFTREMNVACALFQEMSRI-GCLPNLYTYTCLI 543
V + ++ +G E ++ F M ++ +P + Y CL+
Sbjct: 417 VTFIAVLCSCNHAGLIDEGIDY-----------------FYSMEKVYDLVPQVEHYGCLV 459
Query: 544 DGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRI 587
D ++ + A ++ M + P+VV + L+ H +
Sbjct: 460 DLLGRVGRLKEAIKVVQTMPME---PNVVIWGALLGACRMHNEV 500
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/386 (20%), Positives = 162/386 (41%), Gaps = 41/386 (10%)
Query: 240 PLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAH 295
P ++ ++ ++SC G+ A E+ G++ SG P V+ I +++
Sbjct: 169 PERDVASWNTVISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGK 228
Query: 296 KLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAF 355
++ RK K L+ + +A++ + + + A EV ++M + ++N ++ +
Sbjct: 229 EIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREVFQKMPR----KSLVAWNSMIKGY 284
Query: 356 CKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLC---KNKLKGQQLYDKSLEVYNSMLQ 412
KGD +PS TS+++ C +N L G+ ++ V S++
Sbjct: 285 VAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGY---VIRSVVN 341
Query: 413 NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 472
I N + + L C E E + F + ++ + S+N +I
Sbjct: 342 ADIYVNCSLID--LYFKCGEANLAETV-----FSKTQKDVAE-SWNVMISSYISVGNWFK 393
Query: 473 ALELMPRMLKRNVLPGVVNYSTLISGFAK--------------EQSNFEMVERLFTR--E 516
A+E+ +M+ V P VV +++++ ++ +S E E L + +
Sbjct: 394 AVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLD 453
Query: 517 MNVACALFQEMSRI-GCLP--NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVT 573
M C +E RI +P ++ ++T +I + A FDEM++ G+ PD VT
Sbjct: 454 MYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVT 513
Query: 574 YTVLIAWYHKHGRIGEKNKLFGEMKA 599
+++ G I E K F +M++
Sbjct: 514 LLAVLSACGHAGLIDEGLKFFSQMRS 539
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 120/290 (41%), Gaps = 29/290 (10%)
Query: 309 NSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXX 368
+S +N++I G QR ++EA E+ E+M D+ S+ ++ F KG++
Sbjct: 340 DSVSWNSLITGLVQRKQISEAYELFEKMPG----KDMVSWTDMIKGFSGKGEISKCVELF 395
Query: 369 XXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRV 428
+ + +T++I + Y+++L ++ MLQ + PN+ + +L
Sbjct: 396 GMMP----EKDNITWTAMI----SAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSA 447
Query: 429 HCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPG 488
E L + + I + N ++ M CK A ++ + + P
Sbjct: 448 TASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE----PN 503
Query: 489 VVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 548
+V+Y+T+ISG++ F ++ A LF + G PN T+ L+
Sbjct: 504 IVSYNTMISGYSYNG---------FGKK---ALKLFSMLESSGKEPNGVTFLALLSACVH 551
Query: 549 IDYIDLATQLFDEMKRK-GIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
+ Y+DL + F MK I P Y ++ + G + + + L M
Sbjct: 552 VGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLDDASNLISTM 601
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 139/354 (39%), Gaps = 76/354 (21%)
Query: 242 PNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKL 297
P+ HTY ++ + D+RL I + RSG + + + CG V A+K+
Sbjct: 119 PDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKV 178
Query: 298 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 357
K+ K + +N+VI+GF + G EAL + EM S PD ++ LL+A K
Sbjct: 179 FDKMPEK----DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAK 234
Query: 358 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 417
G +L L K + VY M++ +
Sbjct: 235 IG-------------------------ALTL------------GKRVHVY--MIKVGLTR 255
Query: 418 NTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELM 477
N N +L ++ R G+ EA TL ++ ++ N S+ +I + + K A+EL
Sbjct: 256 NLHSSNVLLDLYARCGRVEEAKTLFDEM----VDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 478 PRMLK-RNVLPGVVNYSTLI-----SGFAKEQSNFEMVERLFTREMNVACALFQEMSRIG 531
M +LP + + ++ G KE FE R+ +E +I
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHCGMVKE--GFEYFRRM------------REEYKIE 357
Query: 532 CLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
P + + C++D + + A + M + P+VV + L+ HG
Sbjct: 358 --PRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQ---PNVVIWRTLLGACTVHG 406
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 82/198 (41%), Gaps = 12/198 (6%)
Query: 262 ILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFC 321
+L ++ + G P+ VTYG + + C ++ H+ RK+ P N+ + +++
Sbjct: 615 VLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSIP-NALAYRVLVNTLW 673
Query: 322 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIV 381
+ G +EA+ +E+M+S Y L C G KP +V
Sbjct: 674 KEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKKICRVANKPLVV 733
Query: 382 NYTSLILLC---KNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREA 438
YT LI C N ++D+ ++ PN + CN +L+ + + G F EA
Sbjct: 734 TYTGLIQACVDSGNIKNAAYIFDQ--------MKKVCSPNLVTCNIMLKAYLQGGLFEEA 785
Query: 439 LTLLEDFHEQGINLNQYS 456
L + E G ++ S
Sbjct: 786 RELFQKMSEDGNHIKNSS 803
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/297 (20%), Positives = 114/297 (38%), Gaps = 51/297 (17%)
Query: 312 CFNAVIHGFCQRGAVNEALEVLEEMKSS---------------RTFPDVYSYNMLLNAFC 356
+ ++ Q G + E V++ M+S R PDV YN +LNA
Sbjct: 545 AYRSIAVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACV 604
Query: 357 KKGDVXXXXXXXXXXXXCQIKPSIVNYT---SLILLCKNKLKGQQLYDKSLEVYNSMLQN 413
++ KPS V Y ++L C+ Y+ E + M ++
Sbjct: 605 QRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEK-------YNLVHEFFRKMQKS 657
Query: 414 AIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMA 473
+I PN + ++ +EG+ EA+ +ED +GI + Y ++ +C
Sbjct: 658 SI-PNALAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEG 716
Query: 474 LELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCL 533
L ++ ++ + P VV Y+ LI + + A +F +M ++ C
Sbjct: 717 LNMLKKICRVANKPLVVTYTGLIQACVDSGN------------IKNAAYIFDQMKKV-CS 763
Query: 534 PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKG------------IFPDVVTYTVLI 578
PNL T ++ + + + A +LF +M G + PD T+ ++
Sbjct: 764 PNLVTCNIMLKAYLQGGLFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTML 820
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/337 (21%), Positives = 143/337 (42%), Gaps = 18/337 (5%)
Query: 199 SAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTI----MMSCG 254
S K++G LH + N++L+ L L + + T++I ++ G
Sbjct: 93 SCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLRKENRAMDKQTFSIVAETLVKVG 152
Query: 255 DIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFN 314
A I + + T I LC G+V A ++ + +
Sbjct: 153 KEEDAIGIFKILDKFSCPQDGFTVTAIISALCSRGHVKRALGVMHHHKDVISGNELSVYR 212
Query: 315 AVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKK-------GDVXXXXXX 367
+++ G+ + V EA V+++MKS+ PD++ +N LL C++ G V
Sbjct: 213 SLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNI 272
Query: 368 XXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILR 427
+I+P+ ++Y +++L C + + + +S ++ M ++ P+T ++R
Sbjct: 273 MLEMRSYKIQPTSMSY-NILLSCLGRTRRVR---ESCQILEQMKRSGCDPDTGSYYFVVR 328
Query: 428 VHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLP 487
V G+F + ++++ E+G + Y ++I ++C AL+L +M KR+ +
Sbjct: 329 VLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKM-KRSSVG 387
Query: 488 GVVN-YSTLISGFAKEQSNFEMVERLFTREMNVACAL 523
G Y LI K NFE L+ +++ L
Sbjct: 388 GYGQVYDLLIPKLCK-GGNFEKGRELWEEALSIDVTL 423
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 82/193 (42%), Gaps = 19/193 (9%)
Query: 436 REALTLLEDFHEQGINLNQYSYNEIIHMICKESYPK-------MALELMPRMLKRNVLPG 488
+EA +++D GI + + +N ++ +C+ + + AL +M M + P
Sbjct: 225 KEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPT 284
Query: 489 VVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCK 548
++Y+ L+S + TR + +C + ++M R GC P+ +Y ++
Sbjct: 285 SMSYNILLSCLGR------------TRRVRESCQILEQMKRSGCDPDTGSYYFVVRVLYL 332
Query: 549 IDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDDGI 608
Q+ DEM +G P+ Y LI R+ +LF +MK + + +
Sbjct: 333 TGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLCGVERVNFALQLFEKMKRSSVGGYGQV 392
Query: 609 KKLQDPKLVQFMN 621
L PKL + N
Sbjct: 393 YDLLIPKLCKGGN 405
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 127/304 (41%), Gaps = 42/304 (13%)
Query: 286 CECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDV 345
C+C + A R+L ++ N FN++I G+ Q G +A+E+ E + + D
Sbjct: 93 CKCRELGFA----RQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDK 148
Query: 346 YSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL---CKNKLKGQQLYDK 402
++Y L ++ D+ + + LI + C + L+D+
Sbjct: 149 FTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDR 208
Query: 403 SLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIH 462
E ++ + N++I ++ R G E L LL H G+NL Y+ ++
Sbjct: 209 CDE------RDQVSWNSLISGYV-----RVGAAEEPLNLLAKMHRDGLNLTTYALGSVLK 257
Query: 463 MIC---KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNV 519
C E + + + + K + +V + L+ +AK S +
Sbjct: 258 ACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGS------------LKE 305
Query: 520 ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI-DLAT----QLFDEMKRKGIFPDVVTY 574
A LF M N+ TY +I GF ++D I D A+ +LF +M+R+G+ P T+
Sbjct: 306 AIKLFSLMPS----KNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTF 361
Query: 575 TVLI 578
+V++
Sbjct: 362 SVVL 365
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 95/489 (19%), Positives = 184/489 (37%), Gaps = 83/489 (16%)
Query: 141 LEVFALLRDIV--GYCKCDDSFEQFSTLLDLPHHSVLVFNVLIKVFASNSMLEHAHQVFV 198
LE+ A L +++ Y KC +P+ +++ + L+ + N++ + A ++F
Sbjct: 280 LEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFT 339
Query: 199 SAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXXXXXLMETGPLPNIHTYTIMMSCGDIRL 258
S GL+ + +C+ +L L G +H YTI + G+
Sbjct: 340 SMSKFGLKPDMYACSSILTSC-------------ASLHALGFGTQVHAYTIKANLGNDSY 386
Query: 259 AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIH 318
L +Y C+C D RK+ + FNA+I
Sbjct: 387 VTNSLIDMYAK----------------CDC-LTD-----ARKVFDIFAAADVVLFNAMIE 424
Query: 319 GFCQRGA---VNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQ 375
G+ + G ++EAL + +M+ P + ++ LL A +
Sbjct: 425 GYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYG 484
Query: 376 IKPSIVNYTSLILLCKN-------KLKGQQLYDKSLEVYNSMLQNAIRP-------NTII 421
+ I ++LI + N +L ++ K L ++NSM ++ N +
Sbjct: 485 LNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFL 544
Query: 422 CNHILRVHCREGQFREALT---------LLEDFH----EQGINLNQYSYNEIIHMICKES 468
+ R E F +T L ++FH ++G+ N Y N ++ M K
Sbjct: 545 ELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCG 604
Query: 469 YPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMS 528
P+ A + R+ VV ++++IS +A E A + ++M
Sbjct: 605 SPEDAHKAFDSAASRD----VVCWNSVISSYANHG------------EGKKALQMLEKMM 648
Query: 529 RIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIG 588
G PN T+ ++ ++ + F+ M R GI P+ Y +++ + GR+
Sbjct: 649 SEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLN 708
Query: 589 EKNKLFGEM 597
+ +L +M
Sbjct: 709 KARELIEKM 717
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 118/282 (41%), Gaps = 22/282 (7%)
Query: 239 GPLPNIHTY-TIMMSCGDIRL---AAEILGKIYRSGGNPTVVTYGTYIRGLCECGYVDVA 294
G +P+ T+ T++ +CG++R EI GK+ +G VV + + +CG V A
Sbjct: 260 GLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREA 319
Query: 295 HKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNA 354
++ + K NS ++A++ G+CQ G +A+E+ EM+ D+Y + +L A
Sbjct: 320 RQVFNGMSKK----NSVSWSALLGGYCQNGEHEKAIEIFREMEE----KDLYCFGTVLKA 371
Query: 355 FCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNA 414
V +++ ++LI L D + VY+ M +
Sbjct: 372 CAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGK----SGCIDSASRVYSKM---S 424
Query: 415 IRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMAL 474
IR N I N +L + G+ EA++ D ++GI + S+ I+
Sbjct: 425 IR-NMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGR 483
Query: 475 ELMPRMLKR-NVLPGVVNYSTLISGFAKEQSNFEMVERLFTR 515
M K + PG +YS +I + FE E L R
Sbjct: 484 NYFVLMAKSYGIKPGTEHYSCMIDLLGR-AGLFEEAENLLER 524
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/316 (18%), Positives = 126/316 (39%), Gaps = 42/316 (13%)
Query: 310 SHCFNAVI--HGFCQRGAVNEALEVL-----EEMKSSRTF-----PDVYSYNMLLNAFCK 357
CF+ V+ HGF ++ L L E + + R F PDV + +L+AF K
Sbjct: 182 GRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSK 241
Query: 358 KGDVXXXXXXXXXXXXCQ-IKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIR 416
+ + P + +++ C N + +Q E++ ++ N I
Sbjct: 242 NDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQ----GKEIHGKLITNGIG 297
Query: 417 PNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALEL 476
N ++ + +L ++ + G REA + ++ N S++ ++ C+ + A+E+
Sbjct: 298 SNVVVESSLLDMYGKCGSVREARQVFNGMSKK----NSVSWSALLGGYCQNGEHEKAIEI 353
Query: 477 MPRMLKRN------VLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI 530
M +++ VL + + G ++ + + V R + V AL +
Sbjct: 354 FREMEEKDLYCFGTVLKACAGLAAVRLG---KEIHGQYVRRGCFGNVIVESALIDLYGKS 410
Query: 531 GCLP------------NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLI 578
GC+ N+ T+ ++ + + A F++M +KGI PD +++ ++
Sbjct: 411 GCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAIL 470
Query: 579 AWYHKHGRIGEKNKLF 594
G + E F
Sbjct: 471 TACGHTGMVDEGRNYF 486
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/324 (19%), Positives = 130/324 (40%), Gaps = 45/324 (13%)
Query: 297 LVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFC 356
LV + C L + + C G+V++ +V + M+ V S+ L+ +
Sbjct: 300 LVDDVECSLVDMYAKC--------SADGSVDDCRKVFDRMEDH----SVMSWTALITGYM 347
Query: 357 KKGDVXXXXXXXXXXXXCQ--IKPSIVNYTSLILLCKNKLKGQQLYDKSL--EVYNSMLQ 412
K ++ Q ++P+ ++S C N L D + +V +
Sbjct: 348 KNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGN------LSDPRVGKQVLGQAFK 401
Query: 413 NAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKM 472
+ N+ + N ++ + + + +A E E+ N SYN + C+ +
Sbjct: 402 RGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEK----NLVSYNTFLDGTCRNLNFEQ 457
Query: 473 ALELMPRMLKRNVLPGVVNYSTLISGFAK-------EQSNFEMVERLFTREMNVACALFQ 525
A +L+ + +R + +++L+SG A EQ + ++V+ + V AL
Sbjct: 458 AFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALIS 517
Query: 526 EMSRIGCLP------------NLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVT 573
S+ G + N+ ++T +I GF K + + F++M +G+ P+ VT
Sbjct: 518 MYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVT 577
Query: 574 YTVLIAWYHKHGRIGEKNKLFGEM 597
Y +++ G + E + F M
Sbjct: 578 YVAILSACSHVGLVSEGWRHFNSM 601
>AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:744026-746407 REVERSE
LENGTH=793
Length = 793
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 135/336 (40%), Gaps = 28/336 (8%)
Query: 272 NPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPL---NSHCFNAVIHGFCQRGAVNE 328
PT Y + E G + K + K + P+ NS N VI+ G +++
Sbjct: 456 QPTEEIYVKLAKAFLESGKMKELAKFLLKAEHEDSPVSSDNSMLIN-VINACISLGMLDQ 514
Query: 329 ALEVLEEMKSS--RTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSL 386
A ++L+EM+ + RT VYS LL A+C I+ Y +L
Sbjct: 515 AHDLLDEMRMAGVRTGSSVYSS--LLKAYCNTNQTREVTSLLRDAQKAGIQLDSSCYEAL 572
Query: 387 IL--LCKNKLKGQQLYDKSLEVYNSMLQNAI-RPNTIICNHILRVHCREGQFREAL--TL 441
I + +N G +L V+ M + I R +L+ C EG L L
Sbjct: 573 IQSQVIQNDTHG------ALNVFKEMKEAKILRGGNQKFEKLLK-GC-EGNAEAGLMSKL 624
Query: 442 LEDFHE-QGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFA 500
L + E Q ++ + +N +IH K+ + A + + RM P + ++++G+A
Sbjct: 625 LREIREVQSLDAGVHDWNNVIHFFSKKGLMQDAEKALKRMRSLGHSPNAQTFHSMVTGYA 684
Query: 501 KEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 560
S + V L+ EM A M L + YT + GF A ++ +
Sbjct: 685 AIGSKYTEVTELWG-EMKSIAAATSSMKFDQELLDAVLYTFVRGGF-----FSRANEVVE 738
Query: 561 EMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGE 596
M++K +F D Y +L YHK G+ K+ E
Sbjct: 739 MMEKKNMFVDKYKYRMLFLKYHKTAYKGKAPKVQSE 774
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 89/455 (19%), Positives = 163/455 (35%), Gaps = 125/455 (27%)
Query: 168 DLPHHSVLVFNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXX 227
++ V+ +N +I + SN + E VFV G+E+ + +
Sbjct: 255 EMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLAT---------------- 298
Query: 228 XXXXXXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTY-----GTYI 282
++ C D RL + LG+ S G + T +
Sbjct: 299 ------------------IVSVFAGCADSRLIS--LGRAVHSIGVKACFSREDRFCNTLL 338
Query: 283 RGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF 342
+CG +D A + R++ + + + ++I G+ + G EA+++ EEM+
Sbjct: 339 DMYSKCGDLDSAKAVFREMSDR----SVVSYTSMIAGYAREGLAGEAVKLFEEMEEE--- 391
Query: 343 PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDK 402
I P + T+++ C +L D+
Sbjct: 392 --------------------------------GISPDVYTVTAVLNCCAR----YRLLDE 415
Query: 403 SLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIH 462
V+ + +N + + + N ++ ++ + G +EA + + + I S+N II
Sbjct: 416 GKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI----ISWNTIIG 471
Query: 463 MICKESYPKMALELMPRMLKRN-----------VLPGVVNYSTLISGFAKEQSNFEMVER 511
K Y AL L +L+ VLP + S G +E + M
Sbjct: 472 GYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKG--REIHGYIM--- 526
Query: 512 LFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDV 571
R G + + L+D + K + LA LFD++ K D+
Sbjct: 527 -----------------RNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK----DL 565
Query: 572 VTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 606
V++TV+IA Y HG E LF +M+ I D+
Sbjct: 566 VSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADE 600
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 139/358 (38%), Gaps = 43/358 (12%)
Query: 238 TGPLPNIHTYTIMMS-CGDIRLAAEILGKIYRS-----GGNPTVVTYGTYIRGLCECGYV 291
G PN T+ ++S CGD +E LG + G + V GT I G+ Y
Sbjct: 65 AGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNHVMVGTAIIGM----YS 120
Query: 292 DVAH-KLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNM 350
K R + + NS +N +I G+ + G V+ A ++ ++M D+ S+
Sbjct: 121 KRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPER----DLISWTA 176
Query: 351 LLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSM 410
++N F KKG +KP V + + C N L V+ +
Sbjct: 177 MINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTN----LGALSFGLWVHRYV 232
Query: 411 LQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYP 470
L + N + N ++ ++CR G A + + ++ + S+N +I
Sbjct: 233 LSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTV----VSWNSVIVGFAANGNA 288
Query: 471 KMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMS-- 528
+L +M ++ P V ++ ++ S+ +VE FQ M
Sbjct: 289 HESLVYFRKMQEKGFKPDAVTFTGALTAC----SHVGLVEE--------GLRYFQIMKCD 336
Query: 529 -RIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
RI P + Y CL+D + + ++ A +L M K P+ V L+A HG
Sbjct: 337 YRIS--PRIEHYGCLVDLYSRAGRLEDALKLVQSMPMK---PNEVVIGSLLAACSNHG 389
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 97/472 (20%), Positives = 185/472 (39%), Gaps = 81/472 (17%)
Query: 169 LPHHSVLVFNVLIKVFASNSMLEHAHQVF----VSAKNVGLELHIRSCNFL--LKCLXXX 222
+P V+ N L+ + N E A ++F SA + L +++C L LKC
Sbjct: 150 MPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITLTTVLKACAELEALKCGKQI 209
Query: 223 XXXXXXXXXXXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYRSGGNPTVVTYGTYI 282
L N++ CGD+R+A+ +L +I P + I
Sbjct: 210 HAQILIGGVECDSKMNSSLVNVYA-----KCGDLRMASYMLEQIRE----PDDHSLSALI 260
Query: 283 RGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTF 342
G CG V+ + L + + L +N++I G+ EAL + EM++ T
Sbjct: 261 SGYANCGRVNESRGLFDRKSNRCVIL----WNSMISGYIANNMKMEALVLFNEMRN-ETR 315
Query: 343 PDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL---CKNKLKGQQL 399
D + ++NA G + + IV ++L+ + C + ++ +L
Sbjct: 316 EDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKL 375
Query: 400 YDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNE 459
+ + +E Y+ TI+ N +++V+ G+ +A + E + + S+N
Sbjct: 376 FSE-VESYD----------TILLNSMIKVYFSCGRIDDAKRVFERIENKSL----ISWNS 420
Query: 460 IIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNV 519
+ + + LE +M K ++ V+ S++IS A S+ E+ E++F R
Sbjct: 421 MTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACAS-ISSLELGEQVFAR---- 475
Query: 520 ACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK-------------- 565
+ +G + + LID +CK +++ ++FD M +
Sbjct: 476 -------ATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYAT 528
Query: 566 -----------------GIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 600
GI P +T+ V++ + G + E KLF MK +
Sbjct: 529 NGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVD 580
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/314 (19%), Positives = 133/314 (42%), Gaps = 30/314 (9%)
Query: 300 KLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKG 359
K+ ++H N + +N ++ G+ + G + A V + M DV S+N ++ + + G
Sbjct: 103 KVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPER----DVVSWNTMVIGYAQDG 158
Query: 360 DVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNT 419
++ IK + ++ L+ C +K +QL + + + +L N
Sbjct: 159 NLHEALWFYKEFRRSGIKFNEFSFAGLLTAC---VKSRQL-QLNRQAHGQVLVAGFLSNV 214
Query: 420 IICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPR 479
++ I+ + + GQ A ++ + I++ + +I K + A +L
Sbjct: 215 VLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHI----WTTLISGYAKLGDMEAAEKLFCE 270
Query: 480 MLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTY 539
M ++N V+++ LI+G+ ++ S N A LF++M +G P +T+
Sbjct: 271 MPEKNP----VSWTALIAGYVRQGSG------------NRALDLFRKMIALGVKPEQFTF 314
Query: 540 TCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFG--EM 597
+ + I + ++ M R + P+ + + LI Y K G + ++F +
Sbjct: 315 SSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDD 374
Query: 598 KANCILLDDGIKKL 611
K +C+ + I L
Sbjct: 375 KHDCVFWNTMISAL 388
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 92/207 (44%), Gaps = 39/207 (18%)
Query: 416 RPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALE 475
RPNT++ NH++ ++ + G+ +A + + H + N YS+N ++ K A
Sbjct: 79 RPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR----NLYSWNNMVSGYVKSGMLVRARV 134
Query: 476 LMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGC--- 532
+ M +R+ VV+++T++ G+A++ + E + F +E + F E S G
Sbjct: 135 VFDSMPERD----VVSWNTMVIGYAQDGNLHEAL--WFYKEFRRSGIKFNEFSFAGLLTA 188
Query: 533 ----------------------LPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPD 570
L N+ +ID + K ++ A + FDEM K D
Sbjct: 189 CVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVK----D 244
Query: 571 VVTYTVLIAWYHKHGRIGEKNKLFGEM 597
+ +T LI+ Y K G + KLF EM
Sbjct: 245 IHIWTTLISGYAKLGDMEAAEKLFCEM 271
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 98/463 (21%), Positives = 177/463 (38%), Gaps = 55/463 (11%)
Query: 173 SVLV-FNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLKCLXXXXXXXXXXXX 231
SVLV I A + + A QVF EL + N +L
Sbjct: 2 SVLVRLTSKIASLAKSGRIASARQVFDGMP----ELDTVAWNTMLTSYSRLGLHQEAIAL 57
Query: 232 XXXLMETGPLPNIHTYTIMMSC----GDIRLAAEILGKIYRSGGNPTVVTYGTYIRGLCE 287
L + P+ +++T ++S G+++ +I + RSG ++ + I +
Sbjct: 58 FTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGK 117
Query: 288 CGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYS 347
C A+K+ R + C + C +++ + AL+V EM F +
Sbjct: 118 CSDTLSANKVFRDMCCDSRNEVTWC--SLLFAYMNAEQFEAALDVFVEMPKRVAF----A 171
Query: 348 YNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVY 407
+N++++ G + + KP ++SL+ C +Y + V+
Sbjct: 172 WNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSAD-SSNVVYGRM--VH 228
Query: 408 NSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKE 467
ML+N N +L + + G +A+ LE L Q S+N II K
Sbjct: 229 AVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEV----LTQVSWNSIIDACMKI 284
Query: 468 SYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNV-------- 519
+ ALE+ ++N +V ++T+I+G+ + + E R F M
Sbjct: 285 GETEKALEVFHLAPEKN----IVTWTTMITGYGR-NGDGEQALRFFVEMMKSGVDSDHFA 339
Query: 520 ------AC---ALFQEMSRI-GCLPN------LYTYTCLIDGFCKIDYIDLATQLFDEMK 563
AC AL I GCL + Y L++ + K I A + F ++
Sbjct: 340 YGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIA 399
Query: 564 RKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKANCILLDD 606
K D+V++ ++ + HG + KL+ M A+ I D+
Sbjct: 400 NK----DLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDN 438
>AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17292479-17293717 REVERSE
LENGTH=412
Length = 412
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/266 (21%), Positives = 107/266 (40%), Gaps = 50/266 (18%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
++ +I + Q N A+ E+M T S+N LLNA
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNA------------------ 146
Query: 373 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 432
C L KN K QL+D+ + YN ++ P+ I +++ +C
Sbjct: 147 -C-------------LHSKNFDKVPQLFDEIPQRYNKII-----PDKISYGILIKSYCDS 187
Query: 433 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 492
G +A+ ++ +G+ + ++ I+ + K+ ++A L M+K+ Y
Sbjct: 188 GTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAY 247
Query: 493 STLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYI 552
+ I KE ER+ L +EMS +G P+ +Y L+ +C+ +
Sbjct: 248 NVRIMSAQKESP-----ERV--------KELIEEMSSMGLKPDTISYNYLMTAYCERGML 294
Query: 553 DLATQLFDEMKRKGIFPDVVTYTVLI 578
D A ++++ ++ P+ T+ LI
Sbjct: 295 DEAKKVYEGLEGNNCAPNAATFRTLI 320
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 102/242 (42%), Gaps = 20/242 (8%)
Query: 177 FNVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSCNFLLK-CLXXXXXXXXXXXXXXXL 235
++ LI+ + SM HA + F G S N LL CL L
Sbjct: 105 YSTLIRSYGQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQ-----L 159
Query: 236 METGP------LPNIHTYTIMM----SCGDIRLAAEILGKIYRSGGNPTVVTYGTYIRGL 285
+ P +P+ +Y I++ G A EI+ ++ G T + + T + L
Sbjct: 160 FDEIPQRYNKIIPDKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSL 219
Query: 286 CECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDV 345
+ G ++VA L ++ K L++ +N I Q+ + E++EEM S PD
Sbjct: 220 YKKGELEVADNLWNEMVKKGCELDNAAYNVRIMS-AQKESPERVKELIEEMSSMGLKPDT 278
Query: 346 YSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL-LCKNKL--KGQQLYDK 402
SYN L+ A+C++G + P+ + +LI LC ++L +G ++ K
Sbjct: 279 ISYNYLMTAYCERGMLDEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKK 338
Query: 403 SL 404
S+
Sbjct: 339 SV 340
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/208 (21%), Positives = 92/208 (44%), Gaps = 16/208 (7%)
Query: 396 GQ-QLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ--GINL 452
GQ +++ ++ + M Q + + N +L F + L ++ ++ I
Sbjct: 113 GQASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIP 172
Query: 453 NQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERL 512
++ SY +I C P+ A+E+M +M + + + ++T++S K+
Sbjct: 173 DKISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKG--------- 223
Query: 513 FTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVV 572
E+ VA L+ EM + GC + Y I K + + +L +EM G+ PD +
Sbjct: 224 ---ELEVADNLWNEMVKKGCELDNAAYNVRIMSAQK-ESPERVKELIEEMSSMGLKPDTI 279
Query: 573 TYTVLIAWYHKHGRIGEKNKLFGEMKAN 600
+Y L+ Y + G + E K++ ++ N
Sbjct: 280 SYNYLMTAYCERGMLDEAKKVYEGLEGN 307
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 84/187 (44%), Gaps = 6/187 (3%)
Query: 263 LGKIYRSGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQ 322
+ K+Y G P + TY IR LCE G ++ +V ++ K + F +I GF +
Sbjct: 172 MPKMY--GIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYK 229
Query: 323 RGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVN 382
+E +V+ M V +YN+++ CK+ C+++P+ V
Sbjct: 230 EEKFDEVRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVT 289
Query: 383 YTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLL 442
Y+ LI + ++ D+++ ++ M+ N +P++ ++ C+ G F AL L
Sbjct: 290 YSLLI----HGFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILC 345
Query: 443 EDFHEQG 449
+ E+
Sbjct: 346 RESMEKN 352
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 399 LYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQ-FREA-LTLLEDFHEQGINLNQYS 456
+ D+S++ + ++ Q I P T+ + L C + ++EA LE GI + +
Sbjct: 126 MLDRSIQTFRNLEQYEI-PRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLET 184
Query: 457 YNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTRE 516
YN +I ++C+ + ++ M ++ + P ++ +I GF KE+ F+ V ++ R
Sbjct: 185 YNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEE-KFDEVRKVM-RM 242
Query: 517 MN-----VACALFQEMSRIGCL----------------------PNLYTYTCLIDGFCKI 549
M+ V A + M I CL PN TY+ LI GFC
Sbjct: 243 MDEFGVHVGVATYNIM--IQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSE 300
Query: 550 DYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
+ +D A LF+ M G PD Y LI K G
Sbjct: 301 ENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGG 336
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 94/203 (46%), Gaps = 20/203 (9%)
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
++ + L+N + ++ + ++ ++ + GQ + A + E+ ++ + +N +I+ C
Sbjct: 148 LHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYC 207
Query: 466 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQ 525
+ MA L M +RN ++STLI G+ + E+N A LF+
Sbjct: 208 RAKDMHMATTLFRSMPERNS----GSWSTLIKGYVD------------SGELNRAKQLFE 251
Query: 526 EMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
M N+ ++T LI+GF + + A + EM KG+ P+ T +++ K G
Sbjct: 252 LMPE----KNVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSG 307
Query: 586 RIGEKNKLFGEMKANCILLDDGI 608
+G ++ G + N I LD I
Sbjct: 308 ALGSGIRIHGYILDNGIKLDRAI 330
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/453 (17%), Positives = 163/453 (35%), Gaps = 79/453 (17%)
Query: 164 STLLDLPHHSVLVF-----------NVLIKVFASNSMLEHAHQVFVSAKNVGLELHIRSC 212
S+LL P +S+ +F N LI+ N+ E + + F+ +G++ +
Sbjct: 70 SSLLKSPDYSLSIFRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTF 129
Query: 213 NFLLKCLXXXX----XXXXXXXXXXXLMETGPLPNIHTYTIMMSCGDIRLAAEILGKIYR 268
F+LK ++ + + G ++ A ++ +
Sbjct: 130 PFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPD 189
Query: 269 SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 328
+++ + I G C + +A L R + + NS ++ +I G+ G +N
Sbjct: 190 RIKKESILIWNVLINGYCRAKDMHMATTLFRSMPER----NSGSWSTLIKGYVDSGELNR 245
Query: 329 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLIL 388
A ++ E M +V S+ L+N F + GD
Sbjct: 246 AKQLFELMPEK----NVVSWTTLINGFSQTGD---------------------------- 273
Query: 389 LCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQ 448
Y+ ++ Y ML+ ++PN +L + G + + +
Sbjct: 274 -----------YETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDN 322
Query: 449 GINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEM 508
GI L++ ++ M K A + M +++L +++ +I G+A
Sbjct: 323 GIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDIL----SWTAMIQGWA-------- 370
Query: 509 VERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK-GI 567
V F + A F++M G P+ + ++ +DL FD M+ I
Sbjct: 371 VHGRFHQ----AIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAI 426
Query: 568 FPDVVTYTVLIAWYHKHGRIGEKNKLFGEMKAN 600
P + Y +++ + G++ E ++L M N
Sbjct: 427 EPTLKHYVLVVDLLGRAGKLNEAHELVENMPIN 459
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 130/310 (41%), Gaps = 37/310 (11%)
Query: 298 VRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCK 357
RK+ L + FNA+I G+ +EAL ++++MK PDV ++N L++ F
Sbjct: 171 ARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH 230
Query: 358 KGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRP 417
+ KP +V++TS+I + + ++ +D + ML + + P
Sbjct: 231 MRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFD----AFKQMLTHGLYP 286
Query: 418 N--TII-----CNHILRV-HCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESY 469
N TII C + + H +E +T LED + + + ++ M K +
Sbjct: 287 NSATIITLLPACTTLAYMKHGKEIHGYSVVTGLED--------HGFVRSALLDMYGKCGF 338
Query: 470 PKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSR 529
A+ L + K+ V ++++I +A N + ++ A LF +M
Sbjct: 339 ISEAMILFRKTPKKT----TVTFNSMIFCYA----NHGLADK--------AVELFDQMEA 382
Query: 530 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRK-GIFPDVVTYTVLIAWYHKHGRIG 588
G + T+T ++ DL LF M+ K I P + Y ++ + G++
Sbjct: 383 TGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLV 442
Query: 589 EKNKLFGEMK 598
E ++ M+
Sbjct: 443 EAYEMIKAMR 452
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 116/287 (40%), Gaps = 61/287 (21%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
+N +I G+ Q G +AL ++ EM ++ PD ++ + +L F + DV
Sbjct: 210 YNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDV----------- 258
Query: 373 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 432
+KG+ E++ +++ I + I + ++ ++ +
Sbjct: 259 ---------------------IKGK-------EIHGYVIRKGIDSDVYIGSSLVDMYAKS 290
Query: 433 GQFREALTLLEDFH-EQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVN 491
+ ++ + + GI S+N ++ + AL L +M+ V PG V
Sbjct: 291 ARIEDSERVFSRLYCRDGI-----SWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVA 345
Query: 492 YSTLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDY 551
+S++I A + +++ L + R G N++ + L+D + K
Sbjct: 346 FSSVIPACAHLAT------------LHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGN 393
Query: 552 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
I A ++FD M D V++T +I + HG E LF EMK
Sbjct: 394 IKAARKIFDRMN----VLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 434 QFREALTLLEDFHEQGI-NLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 492
Q+ +AL + + EQ + +Y +++ ++ K P A +L ML+ + P V Y
Sbjct: 103 QWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELY 162
Query: 493 STLISGFAKEQSNFEMVERLFTREMNVACALFQEMSRI-GCLPNLYTYTCLIDGFCKIDY 551
+ L++ + + SN ++ A ++ +M C P+++TY+ L+
Sbjct: 163 TALLAAYTR--SNL----------IDDAFSILDKMKSFPQCQPDVFTYSTLLKACVDASQ 210
Query: 552 IDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLFGEM 597
DL L+ EM + I P+ VT ++++ Y + GR + K+ +M
Sbjct: 211 FDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDM 256
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/200 (20%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 386 LILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDF 445
L+LL K+ GQ +++ ++++ ML+ + P + +L + R +A ++L+
Sbjct: 131 LVLLGKS---GQP--NRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKM 185
Query: 446 HE-QGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS 504
+ ++Y+ ++ S + L M +R + P V + ++SG+ +
Sbjct: 186 KSFPQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGR-VG 244
Query: 505 NFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKR 564
F+ +E++ + +M V+ A C P+++T ++ F + ID+ +++ +
Sbjct: 245 RFDQMEKVLS-DMLVSTA---------CKPDVWTMNIILSVFGNMGKIDMMESWYEKFRN 294
Query: 565 KGIFPDVVTYTVLIAWYHKH 584
GI P+ T+ +LI Y K
Sbjct: 295 FGIEPETRTFNILIGSYGKK 314
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 103/268 (38%), Gaps = 22/268 (8%)
Query: 322 QRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKG---DVXXXXXXXXXXXXCQIKP 378
+ G N A ++ +EM P V Y LL A+ + D CQ P
Sbjct: 136 KSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQ--P 193
Query: 379 SIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREA 438
+ Y++L+ C + + +D +Y M + I PNT+ N +L + R G+F +
Sbjct: 194 DVFTYSTLLKACVDASQ----FDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQM 249
Query: 439 LTLLED-FHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLIS 497
+L D + ++ N I+ + M + + P ++ LI
Sbjct: 250 EKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIG 309
Query: 498 GFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQ 557
+ K+ R++ + ++ + M ++ TY +I+ F +
Sbjct: 310 SYGKK--------RMYDK----MSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMEL 357
Query: 558 LFDEMKRKGIFPDVVTYTVLIAWYHKHG 585
FD+M+ +G+ D T+ LI Y G
Sbjct: 358 TFDQMRSEGMKADTKTFCCLINGYANAG 385
>AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4962293-4965976 FORWARD
LENGTH=1227
Length = 1227
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 117/294 (39%), Gaps = 29/294 (9%)
Query: 281 YIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSR 340
++ L G+ +AH +V++L + + +N +I G C + A +L+EM +
Sbjct: 710 FVEKLTVLGFSCIAHSVVKRLEGEGCIVEQEVYNHLIKGLCTEKKDSAAFAILDEMLDKK 769
Query: 341 TFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILLCKNKLKGQQLY 400
P + S ML+ C+ QI S V+Y +KG L
Sbjct: 770 HIPSLGSCLMLIPRLCRANKAGTAFNLAE-----QIDSSYVHYAL--------IKGLSLA 816
Query: 401 DKSLEVYNS---MLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSY 457
K L+ N ML N + I N + + +C+ + + +L + I + SY
Sbjct: 817 GKMLDAENQLRIMLSNGLSSYNKIYNVMFQGYCKGNNWMKVEEVLGLMVRKNIICSVKSY 876
Query: 458 NEIIHMICKESYPKMALELMPRMLKRNVLP-GVVNYSTLISGFAKEQSNFEMVERLFTRE 516
E + +C E A+ L +L P GV+ Y+ LI + +++ E+ + L
Sbjct: 877 REYVRKMCLEPQSLSAISLKEFLLLGESNPGGVIIYNMLIFYMFRAKNHLEVNKVLL--- 933
Query: 517 MNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPD 570
EM G LP+ T+ L+ G+ + + M KG+ P+
Sbjct: 934 ---------EMQGRGVLPDETTFNFLVHGYSSSADYSSSLRYLSAMISKGMKPN 978
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/336 (17%), Positives = 133/336 (39%), Gaps = 52/336 (15%)
Query: 282 IRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNEALEVLEEMKSSRT 341
+R CGY +VAH++ ++ + + +N++I G+ + G +A+ + +M
Sbjct: 134 VRLYASCGYAEVAHEVFDRMSKR--DSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGV 191
Query: 342 FPDVYSYNMLLNAFCKKGDVXXXXXXXXXXXXCQIKPSIVNYTSLILL---CKNKLKGQQ 398
PD +++ +L A G V + +L+++ C + +K +
Sbjct: 192 KPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARN 251
Query: 399 LYD------------------------KSLEVYNSMLQNAIRPNTIICNHILRVHCREGQ 434
++D ++L+++ M+QN I P+ + + +L R
Sbjct: 252 VFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLS 308
Query: 435 FREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYST 494
F+ L +G+ N +I + K A + +ML+R+ V+++
Sbjct: 309 FKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQMLERD----TVSWNA 364
Query: 495 LISGFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDL 554
+IS +K + + F++M R P+ T+ ++ ++
Sbjct: 365 IISAHSKNSNGLK---------------YFEQMHRANAKPDGITFVSVLSLCANTGMVED 409
Query: 555 ATQLFDEMKRK-GIFPDVVTYTVLIAWYHKHGRIGE 589
+LF M ++ GI P + Y ++ Y + G + E
Sbjct: 410 GERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEE 445
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/376 (21%), Positives = 143/376 (38%), Gaps = 52/376 (13%)
Query: 269 SGGNPTVVTYGTYIRGLCECGYVDVAHKLVRKLHCKLHPLNSHCFNAVIHGFCQRGAVNE 328
SG + G+ CG + A K+ ++ K + +A++ + ++G + E
Sbjct: 145 SGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDK----DVVTCSALLCAYARKGCLEE 200
Query: 329 ALEVLEEMKSSRTFPDVYSYNMLLNAFCKKG----------DVXXXXXXXXXXXXCQIKP 378
+ +L EM+SS ++ S+N +L+ F + G + + P
Sbjct: 201 VVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLP 260
Query: 379 SI-----VNYTSLI---LLCKNKLKGQ-------QLYDKSLEVYN--SMLQNAIRPNTII 421
S+ +N LI ++ + LK + +Y KS VY S+ +
Sbjct: 261 SVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGV 320
Query: 422 CNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRML 481
CN + R G +AL + E F EQ + LN S+ II + ALEL M
Sbjct: 321 CNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQ 380
Query: 482 KRNVLPGVVNYSTLIS--------GFAKEQSNFEMVERLFTREMNVACALFQEMSRIGCL 533
V P V +++ G + F + L ++V AL ++ G +
Sbjct: 381 VAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDN-VHVGSALIDMYAKCGRI 439
Query: 534 ------------PNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWY 581
NL + L++GF +F+ + R + PD +++T L++
Sbjct: 440 NLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSAC 499
Query: 582 HKHGRIGEKNKLFGEM 597
+ G E K F M
Sbjct: 500 GQVGLTDEGWKYFKMM 515
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 93/211 (44%), Gaps = 18/211 (8%)
Query: 388 LLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHE 447
LLC KG ++ + + + M + I N + N IL R G +EA+ + + H
Sbjct: 188 LLCAYARKG--CLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHH 245
Query: 448 QGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQSNFE 507
G +Q + + ++ + M + ++K+ +L S +I + K +
Sbjct: 246 LGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYG 305
Query: 508 MVERLFTREMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGI 567
++ LF + F+ M C N Y I G + +D A ++F+ K + +
Sbjct: 306 IIS-LFNQ--------FEMMEAGVC--NAY-----ITGLSRNGLVDKALEMFELFKEQTM 349
Query: 568 FPDVVTYTVLIAWYHKHGRIGEKNKLFGEMK 598
+VV++T +IA ++G+ E +LF EM+
Sbjct: 350 ELNVVSWTSIIAGCAQNGKDIEALELFREMQ 380
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/214 (21%), Positives = 86/214 (40%), Gaps = 26/214 (12%)
Query: 406 VYNSMLQNAIRPNTIICNHILRVHCREGQFREALTLLEDFHEQGINLNQYSYNEIIHMIC 465
+ M QN I P+ + ++ ++ + G F A E+ G+ ++ Y +I
Sbjct: 406 ILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYV 465
Query: 466 KESYPKMALELMPRMLKRNVLPGVVNYSTLISGFAKEQS-------------------NF 506
PK+ LM M + + Y L+ +A+ +F
Sbjct: 466 NAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSF 525
Query: 507 EMVERLFTR------EMNVACALFQEMSRIGCLPNLYTYTCLIDGFCKIDYIDLATQLFD 560
E LF +++ A + F EM ++G P+ L+ + + +D A +L
Sbjct: 526 EAYS-LFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLL 584
Query: 561 EMKRKGIFPDVVTYTVLIAWYHKHGRIGEKNKLF 594
++++ GI V+TYTVL+ W G I E +L
Sbjct: 585 QLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLL 618
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 122/311 (39%), Gaps = 68/311 (21%)
Query: 313 FNAVIHGFCQRGAVNEALEVLEEMKSSRTFPDVYSYNMLLNAFCKKGDVXXXXXXXXXXX 372
+ ++I G C+ G EAL+V +MK
Sbjct: 442 WGSLISGLCKNGKFKEALKVFGDMKDDDD------------------------------- 470
Query: 373 XCQIKPSIVNYTSLILLCKNKLKGQQLYDKSLEVYNSMLQNAIRPNTIICNHILRVHCRE 432
+KP TS+ C G + L+V+ SM++ + N + + ++ ++ +
Sbjct: 471 --SLKPDSDIMTSVTNACA----GLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKC 524
Query: 433 GQFREALTLLEDFHEQGINLNQYSYNEIIHMICKESYPKMALELMPRMLKRNVLPGVVNY 492
G AL + + N ++N +I + + P+++++L ML + + P V+
Sbjct: 525 GLPEMALKVFTSMSTE----NMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSI 580
Query: 493 STLI------SGFAKEQSNFEMVERLFTR----------EMNVACA-------LFQEMSR 529
++++ + K +S RL +M V C +F++M
Sbjct: 581 TSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQH 640
Query: 530 IGCLPNLYTYTCLIDGFCKIDYIDLATQLFDEMKRKGIFPDVVTYTVLIAWYHKHGRIGE 589
+L T+ +I G+ A LFDEMK+ G PD VT+ LI+ + G + E
Sbjct: 641 ----KSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEE 696
Query: 590 KNKLFGEMKAN 600
+F MK +
Sbjct: 697 GKNIFEFMKQD 707