Miyakogusa Predicted Gene
- Lj3g3v0381580.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0381580.1 Non Chatacterized Hit- tr|D8QSZ4|D8QSZ4_SELML
Putative uncharacterized protein OS=Selaginella
moelle,30.1,4e-17,seg,NULL,CUFF.40593.1
(265 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G59490.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 273 1e-73
AT3G59490.1 | Symbols: | unknown protein; Has 30 Blast hits to ... 252 2e-67
>AT3G59490.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; Has
30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
2996 (source: NCBI BLink). | chr3:21984660-21986262
REVERSE LENGTH=293
Length = 293
Score = 273 bits (697), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 139/263 (52%), Positives = 175/263 (66%), Gaps = 10/263 (3%)
Query: 3 MEASELDEAMKVLDSCLSLINWRLKPYSKRRLQLDILALCTRMRPVVMVDYGGIMPXXXX 62
ME +E ++ L SCLS I WRLK SKRRL++D+LALCT MRPVVM+DYGG MP
Sbjct: 1 MEVPSSEELLQFLSSCLSQIKWRLKSNSKRRLEIDVLALCTGMRPVVMIDYGGKMPELQN 60
Query: 63 XXXXXXXXAHKESPIFEHIRVMVIQDMIYLIHATELAHYVTSCLNSQPKLLFVDLEHDPP 122
+ P+F+ ++VMVI+DMIYLI+ L +V+S L+S+P+L F+DLE DPP
Sbjct: 61 RLLSLLELIREGLPVFKDLKVMVIEDMIYLINVRSLPKFVSSSLDSEPELFFIDLEQDPP 120
Query: 123 KLITQIEESQLAMQFVSIQKQFLTVFSSEGITDPSPSQEAKCVDDANXXXXXXXXXXTDC 182
K++TQ +ES L MQ SIQK +FSS D S + +D+AN C
Sbjct: 121 KMVTQSKESNLGMQLRSIQK----LFSSTFPLDDSNTDTTTVLDEANSSQTSL------C 170
Query: 183 IDLSNFLDNTDVIVPTLNGWLLGYPVVYLFGKEHIADAIYNLSTKYLHIFQVFVCRNSTL 242
IDLS L +T V +PTLNGWLL YPVVYLFG +HI +AIYNLSTK L +F+V VCRN T
Sbjct: 171 IDLSCCLQDTKVTIPTLNGWLLDYPVVYLFGTDHIEEAIYNLSTKSLRLFKVLVCRNGTT 230
Query: 243 KKGTQAEELLSFTVPYDLSMRGS 265
+K + EEL SF+VPYDLSM GS
Sbjct: 231 EKDSHLEELTSFSVPYDLSMEGS 253
>AT3G59490.1 | Symbols: | unknown protein; Has 30 Blast hits to 30
proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink). |
chr3:21984802-21986262 REVERSE LENGTH=243
Length = 243
Score = 252 bits (644), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/251 (51%), Positives = 164/251 (65%), Gaps = 10/251 (3%)
Query: 3 MEASELDEAMKVLDSCLSLINWRLKPYSKRRLQLDILALCTRMRPVVMVDYGGIMPXXXX 62
ME +E ++ L SCLS I WRLK SKRRL++D+LALCT MRPVVM+DYGG MP
Sbjct: 1 MEVPSSEELLQFLSSCLSQIKWRLKSNSKRRLEIDVLALCTGMRPVVMIDYGGKMPELQN 60
Query: 63 XXXXXXXXAHKESPIFEHIRVMVIQDMIYLIHATELAHYVTSCLNSQPKLLFVDLEHDPP 122
+ P+F+ ++VMVI+DMIYLI+ L +V+S L+S+P+L F+DLE DPP
Sbjct: 61 RLLSLLELIREGLPVFKDLKVMVIEDMIYLINVRSLPKFVSSSLDSEPELFFIDLEQDPP 120
Query: 123 KLITQIEESQLAMQFVSIQKQFLTVFSSEGITDPSPSQEAKCVDDANXXXXXXXXXXTDC 182
K++TQ +ES L MQ SIQK +FSS D S + +D+AN C
Sbjct: 121 KMVTQSKESNLGMQLRSIQK----LFSSTFPLDDSNTDTTTVLDEANSSQTSL------C 170
Query: 183 IDLSNFLDNTDVIVPTLNGWLLGYPVVYLFGKEHIADAIYNLSTKYLHIFQVFVCRNSTL 242
IDLS L +T V +PTLNGWLL YPVVYLFG +HI +AIYNLSTK L +F+V VCRN T
Sbjct: 171 IDLSCCLQDTKVTIPTLNGWLLDYPVVYLFGTDHIEEAIYNLSTKSLRLFKVLVCRNGTT 230
Query: 243 KKGTQAEELLS 253
+K + EEL S
Sbjct: 231 EKDSHLEELTS 241