Miyakogusa Predicted Gene
- Lj3g3v0381570.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0381570.1 Non Chatacterized Hit- tr|B9FFW3|B9FFW3_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,33.03,1e-17,B-Box-type zinc finger,Zinc finger, B-box;
zf-B_box,Zinc finger, B-box; FAMILY NOT NAMED,NULL; ZF_BB,CUFF.40590.1
(270 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G06040.1 | Symbols: STO | B-box zinc finger family protein | ... 266 1e-71
AT2G31380.1 | Symbols: STH | salt tolerance homologue | chr2:133... 254 4e-68
AT1G06040.2 | Symbols: STO | B-box zinc finger family protein | ... 196 1e-50
AT1G78600.1 | Symbols: LZF1, STH3, DBB3 | light-regulated zinc f... 143 1e-34
AT1G78600.2 | Symbols: LZF1 | light-regulated zinc finger protei... 142 2e-34
AT1G75540.1 | Symbols: STH2 | salt tolerance homolog2 | chr1:283... 128 4e-30
AT4G10240.1 | Symbols: | B-box zinc finger family protein | chr... 122 2e-28
AT4G39070.1 | Symbols: | B-box zinc finger family protein | chr... 122 3e-28
AT2G21320.1 | Symbols: | B-box zinc finger family protein | chr... 94 9e-20
AT4G38960.1 | Symbols: | B-box type zinc finger family protein ... 92 3e-19
AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 | chr2:105... 82 4e-16
AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 | chr5:517... 81 8e-16
AT2G24790.2 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 | chr2:105... 80 1e-15
AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 | chr5:858... 77 1e-14
AT3G02380.1 | Symbols: COL2, ATCOL2 | CONSTANS-like 2 | chr3:487... 75 4e-14
AT5G15840.1 | Symbols: CO, FG | B-box type zinc finger protein w... 73 2e-13
AT4G38960.3 | Symbols: | B-box type zinc finger family protein ... 72 4e-13
AT5G15840.2 | Symbols: CO, FG | B-box type zinc finger protein w... 72 5e-13
AT2G47890.1 | Symbols: | B-box type zinc finger protein with CC... 69 4e-12
AT2G33500.2 | Symbols: | B-box type zinc finger protein with CC... 68 7e-12
AT2G33500.1 | Symbols: | B-box type zinc finger protein with CC... 68 7e-12
AT1G28050.1 | Symbols: | B-box type zinc finger protein with CC... 67 1e-11
AT2G47890.2 | Symbols: | B-box type zinc finger protein with CC... 67 2e-11
AT1G68190.1 | Symbols: | B-box zinc finger family protein | chr... 65 4e-11
AT3G07650.4 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 65 5e-11
AT3G07650.3 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 65 5e-11
AT3G07650.2 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 65 5e-11
AT3G07650.1 | Symbols: COL9 | CONSTANS-like 9 | chr3:2442494-244... 65 5e-11
AT5G48250.1 | Symbols: | B-box type zinc finger protein with CC... 62 4e-10
AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 | chr5:233... 62 4e-10
AT3G21880.1 | Symbols: | B-box type zinc finger protein with CC... 60 2e-09
AT4G15250.1 | Symbols: | B-box type zinc finger protein with CC... 57 9e-09
AT1G68520.1 | Symbols: | B-box type zinc finger protein with CC... 52 4e-07
AT1G25440.1 | Symbols: | B-box type zinc finger protein with CC... 51 8e-07
AT1G73870.1 | Symbols: | B-box type zinc finger protein with CC... 51 8e-07
AT4G38960.2 | Symbols: | B-box type zinc finger family protein ... 51 9e-07
>AT1G06040.1 | Symbols: STO | B-box zinc finger family protein |
chr1:1828662-1829659 REVERSE LENGTH=248
Length = 248
Score = 266 bits (680), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 154/273 (56%), Positives = 183/273 (67%), Gaps = 28/273 (10%)
Query: 1 MKIQCDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDIC 60
MKIQCD CEKAPATVICCADEAALC QCD+EIHAANKLASKHQRL L SLS K P+CDIC
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60
Query: 61 QEKTAFIFCVEDRALFCQDCDEPIHAPGSISANHQRFLATGIKVA-GSSKCTKDDEKSHL 119
QEK AFIFCVEDRAL C+DCDE IH S SANHQRFLATGIKVA S+ C+K+ EK+
Sbjct: 61 QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQP 120
Query: 120 EPPS--RNASKISAKIPPQQVPNFTEKIPPQQVPNFTEKVPPQQVPNFTSSWAVDDLLDM 177
EP + + A++I AK QQ + P +P WAVDD
Sbjct: 121 EPSNNQQKANQIPAKSTSQQQQQPSSATP---LP-----------------WAVDDFF-- 158
Query: 178 ELSSFDSPDKYAQKDSLQFGELEWLADDGLFGDQFSQEALAAAEVPQLPATYTSSNVASY 237
S +S DK Q D L GEL+W +D G FGDQ + +AL AAEVP+L ++ +V SY
Sbjct: 159 HFSDIESTDKKGQLD-LGAGELDWFSDMGFFGDQINDKALPAAEVPELSVSHL-GHVHSY 216
Query: 238 RTSKSPMSNKKARIEVLHYDEDDDEYFTVPNLG 270
+ KS +S+KK R E YD+DD+E+F VP+LG
Sbjct: 217 KPMKSNVSHKKPRFET-RYDDDDEEHFIVPDLG 248
>AT2G31380.1 | Symbols: STH | salt tolerance homologue |
chr2:13382150-13383302 FORWARD LENGTH=238
Length = 238
Score = 254 bits (650), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 143/271 (52%), Positives = 176/271 (64%), Gaps = 34/271 (12%)
Query: 1 MKIQCDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDIC 60
MKIQCD CEKAPAT+ICCADEAALCA+CDVE+HAANKLASKHQRL L+SLS K P CDIC
Sbjct: 1 MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSLSTKFPPCDIC 60
Query: 61 QEKTAFIFCVEDRALFCQDCDEPIHAPGSISANHQRFLATGIKVA-GSSKCTKDDEKSHL 119
EK AFIFCVEDRAL C+DCDE HAP + SANHQRFLATGI+VA S+ C ++ EK+H
Sbjct: 61 LEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQRFLATGIRVALSSTSCNQEVEKNHF 120
Query: 120 EPPSRNASKISAKIPPQQVPNFTEKIPPQQVPNFTEKVPPQQVPNFTSSWAVDDLLDMEL 179
+P +++ S PP Q P + WA D+
Sbjct: 121 DP----SNQQSLSKPPTQQPAAPSPL-----------------------WATDEFFSY-- 151
Query: 180 SSFDSPDKYAQKDSLQFGELEWLADDGLFGDQFSQEALAAAEVPQLPATYTSSNVASYRT 239
S D +K +K+ L GEL+WLA+ GLFGDQ QEAL AEVP+L ++ + + R
Sbjct: 152 SDLDCSNK--EKEQLDLGELDWLAEMGLFGDQPDQEALPVAEVPELSFSHLAHAHSYNRP 209
Query: 240 SKSPMSNKKARIEVLHYDEDDDEYFTVPNLG 270
KS + NKK R+E YD D++E+F VP+LG
Sbjct: 210 MKSNVPNKKQRLEY-RYD-DEEEHFLVPDLG 238
>AT1G06040.2 | Symbols: STO | B-box zinc finger family protein |
chr1:1828957-1829659 REVERSE LENGTH=177
Length = 177
Score = 196 bits (499), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/198 (57%), Positives = 130/198 (65%), Gaps = 25/198 (12%)
Query: 1 MKIQCDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDIC 60
MKIQCD CEKAPATVICCADEAALC QCD+EIHAANKLASKHQRL L SLS K P+CDIC
Sbjct: 1 MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60
Query: 61 QEKTAFIFCVEDRALFCQDCDEPIHAPGSISANHQRFLATGIKVA-GSSKCTKDDEKSHL 119
QEK AFIFCVEDRAL C+DCDE IH S SANHQRFLATGIKVA S+ C+K+ EK+
Sbjct: 61 QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQP 120
Query: 120 EPPS--RNASKISAKIPPQQVPNFTEKIPPQQVPNFTEKVPPQQVPNFTSSWAVDDLLDM 177
EP + + A++I AK QQ + P +P WAVDD
Sbjct: 121 EPSNNQQKANQIPAKSTSQQQQQPSSATP---LP-----------------WAVDDFF-- 158
Query: 178 ELSSFDSPDKYAQKDSLQ 195
S +S DK + +Q
Sbjct: 159 HFSDIESTDKVVMRIEIQ 176
>AT1G78600.1 | Symbols: LZF1, STH3, DBB3 | light-regulated zinc
finger protein 1 | chr1:29567370-29568662 FORWARD
LENGTH=299
Length = 299
Score = 143 bits (360), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 69/117 (58%), Positives = 82/117 (70%)
Query: 1 MKIQCDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDIC 60
MKIQC+ CE A ATV+CCADEAALC CD +IHAANKLA KHQR+ L + ++ +PKCDIC
Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60
Query: 61 QEKTAFIFCVEDRALFCQDCDEPIHAPGSISANHQRFLATGIKVAGSSKCTKDDEKS 117
QE + F FC++DRAL C+ CD IH + HQRFL TGIKV S T KS
Sbjct: 61 QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPSTKS 117
>AT1G78600.2 | Symbols: LZF1 | light-regulated zinc finger protein 1
| chr1:29567370-29568662 FORWARD LENGTH=319
Length = 319
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 65/105 (61%), Positives = 78/105 (74%)
Query: 1 MKIQCDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDIC 60
MKIQC+ CE A ATV+CCADEAALC CD +IHAANKLA KHQR+ L + ++ +PKCDIC
Sbjct: 1 MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60
Query: 61 QEKTAFIFCVEDRALFCQDCDEPIHAPGSISANHQRFLATGIKVA 105
QE + F FC++DRAL C+ CD IH + HQRFL TGIKV
Sbjct: 61 QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVG 105
>AT1G75540.1 | Symbols: STH2 | salt tolerance homolog2 |
chr1:28366059-28367398 FORWARD LENGTH=331
Length = 331
Score = 128 bits (322), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 62/115 (53%), Positives = 78/115 (67%), Gaps = 3/115 (2%)
Query: 1 MKIQCDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQR--LLLESLSN-KLPKC 57
MKI+CD C+K A+V C ADEA+LC CD ++H ANKLASKH R LL S SN P C
Sbjct: 1 MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60
Query: 58 DICQEKTAFIFCVEDRALFCQDCDEPIHAPGSISANHQRFLATGIKVAGSSKCTK 112
DICQ+K A +FC +DRA+ C+DCD IHA + H RFL TG+K++ +S K
Sbjct: 61 DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYK 115
>AT4G10240.1 | Symbols: | B-box zinc finger family protein |
chr4:6368967-6369526 REVERSE LENGTH=162
Length = 162
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 77/114 (67%), Gaps = 10/114 (8%)
Query: 1 MKIQCDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLE------SLSNKL 54
MKIQC+ CEKA A V+CC+DEA LC CD+++H ANKL +H R+ L+ + ++
Sbjct: 1 MKIQCEVCEKAEAEVLCCSDEAVLCKPCDIKVHEANKLFQRHHRVALQKDAASATTASGA 60
Query: 55 PKCDICQEKTAFIFCVEDRALFCQDCDEPIHAPGSISANHQRFLATGIKVAGSS 108
P CDICQE+ + FC+EDRA+ C DCDE IH S HQRFL +G++V+ S
Sbjct: 61 PLCDICQERKGYFFCLEDRAMLCNDCDEAIHTCNS----HQRFLLSGVQVSDQS 110
>AT4G39070.1 | Symbols: | B-box zinc finger family protein |
chr4:18205061-18206421 REVERSE LENGTH=242
Length = 242
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 58/108 (53%), Positives = 71/108 (65%), Gaps = 1/108 (0%)
Query: 1 MKIQCDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNK-LPKCDI 59
MKI C C+K A+V CCADEAALC CD +H ANKLA KH R L S + K P CDI
Sbjct: 1 MKIWCAVCDKEEASVFCCADEAALCNGCDRHVHFANKLAGKHLRFSLTSPTFKDAPLCDI 60
Query: 60 CQEKTAFIFCVEDRALFCQDCDEPIHAPGSISANHQRFLATGIKVAGS 107
C E+ A +FC EDRA+ C++CD PIH + H RFL TG+K++ S
Sbjct: 61 CGERRALLFCQEDRAILCRECDIPIHQANEHTKKHNRFLLTGVKISAS 108
>AT2G21320.1 | Symbols: | B-box zinc finger family protein |
chr2:9126502-9127652 FORWARD LENGTH=172
Length = 172
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 1 MKIQCDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDIC 60
M+I CDACE A A V C ADEAALC CD ++H NKLAS+H R+ L SN P CDIC
Sbjct: 1 MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNA-PSCDIC 59
Query: 61 QEKTAFIFCVEDRALFCQDCDEPIHAPGSISANHQRFL 98
+ AF +C D + C CD +H G + H+RFL
Sbjct: 60 ENAPAFFYCEIDGSSLCLQCDMVVHVGGKRT--HRRFL 95
>AT4G38960.1 | Symbols: | B-box type zinc finger family protein |
chr4:18161576-18163045 FORWARD LENGTH=183
Length = 183
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 1 MKIQCDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDIC 60
M+I CDACE A A + C ADEAALC CD ++H NKLAS+H R+ L SN P CDIC
Sbjct: 1 MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPSNA-PCCDIC 59
Query: 61 QEKTAFIFCVEDRALFCQDCDEPIHAPGSISANHQRFL 98
+ AF +C D + C CD +H G + H RFL
Sbjct: 60 ENAPAFFYCEIDGSSLCLQCDMVVHVGGKRT--HGRFL 95
>AT2G24790.1 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 |
chr2:10566959-10567946 FORWARD LENGTH=294
Length = 294
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 5 CDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDICQEKT 64
CD+C+ AT+ C AD A LC CD +IH ANKLAS+H+R+ L C++C++
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL---------CEVCEQAP 58
Query: 65 AFIFCVEDRALFCQDCDEPIHAPGSISANHQR 96
A + C D A C CD IH+ +S H+R
Sbjct: 59 AHVTCKADAAALCVTCDRDIHSANPLSRRHER 90
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%)
Query: 5 CDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRL 45
C+ CE+APA V C AD AALC CD +IH+AN L+ +H+R+
Sbjct: 51 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERV 91
>AT5G15850.1 | Symbols: COL1, ATCOL1 | CONSTANS-like 1 |
chr5:5176297-5177473 REVERSE LENGTH=355
Length = 355
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 5 CDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDICQEKT 64
CD C A TV C AD A LC+ CD ++HAAN+LAS+H+R+ + C C+
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRV---------CQSCERAP 62
Query: 65 AFIFCVEDRALFCQDCDEPIHAPGSISANHQR 96
A FC D A C CD IH+ ++ HQR
Sbjct: 63 AAFFCKADAASLCTTCDSEIHSANPLARRHQR 94
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 5 CDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRL 45
C +CE+APA C AD A+LC CD EIH+AN LA +HQR+
Sbjct: 55 CQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRV 95
>AT2G24790.2 | Symbols: COL3, ATCOL3 | CONSTANS-like 3 |
chr2:10566959-10567621 FORWARD LENGTH=220
Length = 220
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 9/92 (9%)
Query: 5 CDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDICQEKT 64
CD+C+ AT+ C AD A LC CD +IH ANKLAS+H+R+ L C++C++
Sbjct: 8 CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWL---------CEVCEQAP 58
Query: 65 AFIFCVEDRALFCQDCDEPIHAPGSISANHQR 96
A + C D A C CD IH+ +S H+R
Sbjct: 59 AHVTCKADAAALCVTCDRDIHSANPLSRRHER 90
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%)
Query: 5 CDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRL 45
C+ CE+APA V C AD AALC CD +IH+AN L+ +H+R+
Sbjct: 51 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERV 91
>AT5G24930.1 | Symbols: ATCOL4, COL4 | CONSTANS-like 4 |
chr5:8589325-8590949 FORWARD LENGTH=406
Length = 406
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 9/96 (9%)
Query: 5 CDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDICQEKT 64
CD+C+ A A + C D A LC CD ++HAANKLAS+H R+ + C++C++
Sbjct: 50 CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWM---------CEVCEQAP 100
Query: 65 AFIFCVEDRALFCQDCDEPIHAPGSISANHQRFLAT 100
A + C D A C CD IH+ ++ H+R T
Sbjct: 101 AHVTCKADAAALCVTCDRDIHSANPLARRHERVPVT 136
>AT3G02380.1 | Symbols: COL2, ATCOL2 | CONSTANS-like 2 |
chr3:487438-488624 REVERSE LENGTH=347
Length = 347
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 47/92 (51%), Gaps = 9/92 (9%)
Query: 5 CDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDICQEKT 64
CD C A TV C AD A LC CD +HAAN++AS+H+R+ + C C+
Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRV---------CQSCESAP 66
Query: 65 AFIFCVEDRALFCQDCDEPIHAPGSISANHQR 96
A C D A C CD IH+ ++ HQR
Sbjct: 67 AAFLCKADAASLCTACDAEIHSANPLARRHQR 98
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%)
Query: 5 CDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLS 51
C +CE APA +C AD A+LC CD EIH+AN LA +HQR+ + LS
Sbjct: 59 CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLS 105
>AT5G15840.1 | Symbols: CO, FG | B-box type zinc finger protein with
CCT domain | chr5:5171343-5172697 REVERSE LENGTH=373
Length = 373
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 5 CDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDICQEKT 64
CD C TV C AD A LC CD ++H+AN++AS+H+R+ + C+ C+
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV---------CESCERAP 70
Query: 65 AFIFCVEDRALFCQDCDEPIHAPGSISANHQR---FLATGIKVAGSSKCTKDDEKSHLEP 121
A C D A C CD +H+ ++ HQR +G + + EK+ +P
Sbjct: 71 AAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTTHHQSEKTMTDP 130
Query: 122 PSR 124
R
Sbjct: 131 EKR 133
>AT4G38960.3 | Symbols: | B-box type zinc finger family protein |
chr4:18161576-18163045 FORWARD LENGTH=226
Length = 226
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 59/141 (41%), Gaps = 46/141 (32%)
Query: 1 MKIQCDACEKAPATVICCADEAALCAQCD------------------------------- 29
M+I CDACE A A + C ADEAALC CD
Sbjct: 1 MRILCDACENAAAIIFCAADEAALCRPCDEKALHMRLDISKCSESVKRVQIVETSSLIWW 60
Query: 30 ------------VEIHAANKLASKHQRLLLESLSNKLPKCDICQEKTAFIFCVEDRALFC 77
+ +H NKLAS+H R+ L SN P CDIC+ AF +C D + C
Sbjct: 61 IKMGTFCLQSLHLVVHMCNKLASRHVRVGLAEPSNA-PCCDICENAPAFFYCEIDGSSLC 119
Query: 78 QDCDEPIHAPGSISANHQRFL 98
CD +H G + H RFL
Sbjct: 120 LQCDMVVHVGGKRT--HGRFL 138
>AT5G15840.2 | Symbols: CO, FG | B-box type zinc finger protein with
CCT domain | chr5:5171873-5172697 REVERSE LENGTH=274
Length = 274
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 5 CDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDICQEKT 64
CD C TV C AD A LC CD ++H+AN++AS+H+R+ + C+ C+
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRV---------CESCERAP 70
Query: 65 AFIFCVEDRALFCQDCDEPIHAPGSISANHQR---FLATGIKVAGSSKCTKDDEKSHLEP 121
A C D A C CD +H+ ++ HQR +G + + EK+ +P
Sbjct: 71 AAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPISGNSFSSMTTTHHQSEKTMTDP 130
Query: 122 PSR 124
R
Sbjct: 131 EKR 133
>AT2G47890.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:19608245-19609476 FORWARD LENGTH=332
Length = 332
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 5 CDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDICQEKT 64
CD C+ + A V C AD A LC CD ++H AN+L +KH R LL CD C E
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL---------CDSCNESP 63
Query: 65 AFIFCVEDRALFCQDCDEPIHAPGS 89
+ +FC +R++ CQ+CD H S
Sbjct: 64 SSLFCETERSVLCQNCDWQHHTASS 88
>AT2G33500.2 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:14188159-14190046 REVERSE LENGTH=401
Length = 401
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 3 IQCDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDICQE 62
+ C+ C + A + C AD A LC CD +H+AN L+ KH R + CD C +
Sbjct: 10 VACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQI---------CDNCSK 60
Query: 63 KTAFIFCVEDRALFCQDCDEPIHAPGSISANHQRFLATGI 102
+ + C D + CQ+CD +H S SA H+R G
Sbjct: 61 EPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGF 100
>AT2G33500.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:14188159-14190046 REVERSE LENGTH=402
Length = 402
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 49/100 (49%), Gaps = 9/100 (9%)
Query: 3 IQCDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDICQE 62
+ C+ C + A + C AD A LC CD +H+AN L+ KH R + CD C +
Sbjct: 10 VACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQI---------CDNCSK 60
Query: 63 KTAFIFCVEDRALFCQDCDEPIHAPGSISANHQRFLATGI 102
+ + C D + CQ+CD +H S SA H+R G
Sbjct: 61 EPVSVRCFTDNLVLCQECDWDVHGSCSSSATHERSAVEGF 100
>AT1G28050.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:9775768-9777657 REVERSE LENGTH=433
Length = 433
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 2 KIQCDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDICQ 61
++ CD C + A + C AD A LC CD ++H AN L+ KH R + CD C
Sbjct: 6 RVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQI---------CDNCG 56
Query: 62 EKTAFIFCVEDRALFCQDCDEPIHAPGSISANHQRFLATGI 102
+ + C D + CQ+CD +H S+S H R G
Sbjct: 57 NEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVRSAVEGF 97
>AT2G47890.2 | Symbols: | B-box type zinc finger protein with CCT
domain | chr2:19608245-19609036 FORWARD LENGTH=237
Length = 237
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 5 CDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDICQEKT 64
CD C+ + A V C AD A LC CD ++H AN+L +KH R LL CD C E
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLL---------CDSCNESP 63
Query: 65 AFIFCVEDRALFCQDCDEPIHAPGS 89
+ +FC +R++ CQ+CD H S
Sbjct: 64 SSLFCETERSVLCQNCDWQHHTASS 88
>AT1G68190.1 | Symbols: | B-box zinc finger family protein |
chr1:25559384-25561004 FORWARD LENGTH=356
Length = 356
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 1 MKIQCDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDIC 60
M+ C+ C+ A V C AD A LC CD ++H+AN L+ +H R +L CD C
Sbjct: 10 MERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVL---------CDSC 60
Query: 61 QEKTAFIFCVEDRALFCQDCDEPIHAPGSISANHQR 96
+ + + C + + C C++ H G S+ H+R
Sbjct: 61 KNQPCVVRCFDHKMFLCHGCNDKFHGGG--SSEHRR 94
>AT3G07650.4 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 1 MKIQCDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDIC 60
M CD C + + V C +D A LC CD +H+AN L+ +H R L+ C+ C
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV---------CERC 51
Query: 61 QEKTAFIFCVEDRALFCQDCDEPIH 85
+ A + CVE+R CQ+CD H
Sbjct: 52 NAQPATVRCVEERVSLCQNCDWSGH 76
>AT3G07650.3 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 1 MKIQCDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDIC 60
M CD C + + V C +D A LC CD +H+AN L+ +H R L+ C+ C
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV---------CERC 51
Query: 61 QEKTAFIFCVEDRALFCQDCDEPIH 85
+ A + CVE+R CQ+CD H
Sbjct: 52 NAQPATVRCVEERVSLCQNCDWSGH 76
>AT3G07650.2 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 1 MKIQCDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDIC 60
M CD C + + V C +D A LC CD +H+AN L+ +H R L+ C+ C
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV---------CERC 51
Query: 61 QEKTAFIFCVEDRALFCQDCDEPIH 85
+ A + CVE+R CQ+CD H
Sbjct: 52 NAQPATVRCVEERVSLCQNCDWSGH 76
>AT3G07650.1 | Symbols: COL9 | CONSTANS-like 9 |
chr3:2442494-2443901 FORWARD LENGTH=372
Length = 372
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 1 MKIQCDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDIC 60
M CD C + + V C +D A LC CD +H+AN L+ +H R L+ C+ C
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLV---------CERC 51
Query: 61 QEKTAFIFCVEDRALFCQDCDEPIH 85
+ A + CVE+R CQ+CD H
Sbjct: 52 NAQPATVRCVEERVSLCQNCDWSGH 76
>AT5G48250.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr5:19561719-19563113 REVERSE LENGTH=373
Length = 373
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 10/97 (10%)
Query: 1 MKIQCDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDIC 60
M CD C + + V C +D A LC CD +H+AN L+ +H R L+ C+ C
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLV---------CERC 51
Query: 61 QEKTAFIFCVEDRALFCQDCDEPIH-APGSISANHQR 96
+ A + C ++R CQ+CD H S + +H +
Sbjct: 52 NAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSHHK 88
>AT5G57660.1 | Symbols: ATCOL5, COL5 | CONSTANS-like 5 |
chr5:23355573-23356729 FORWARD LENGTH=355
Length = 355
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 13/92 (14%)
Query: 5 CDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDICQEKT 64
CDAC+ A V C D A LC CD IH+ ++H+R+ + C++C++
Sbjct: 22 CDACKSVTAAVFCRVDSAFLCIACDTRIHSF----TRHERVWV---------CEVCEQAP 68
Query: 65 AFIFCVEDRALFCQDCDEPIHAPGSISANHQR 96
A + C D A C CD IH+ +++ H+R
Sbjct: 69 AAVTCKADAAALCVSCDADIHSANPLASRHER 100
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 35/46 (76%)
Query: 5 CDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESL 50
C+ CE+APA V C AD AALC CD +IH+AN LAS+H+R+ +E+
Sbjct: 61 CEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERVPVETF 106
>AT3G21880.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr3:7706748-7708093 FORWARD LENGTH=364
Length = 364
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 1 MKIQCDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDIC 60
M+ +CD C + A + C +D A LC CDV +H+AN L+ +H R L+ C+ C
Sbjct: 1 MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLI---------CEKC 51
Query: 61 QEKTAFIFCVEDRALFCQDC 80
+ A I C++++ +CQ C
Sbjct: 52 FSQPAAIRCLDEKVSYCQGC 71
>AT4G15250.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr4:8709942-8711106 REVERSE LENGTH=330
Length = 330
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 1 MKIQCDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLSNKLPKCDIC 60
M+ +CD C A + C +D A LC CDV +H+AN L+ +H R LL C+ C
Sbjct: 1 MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLL---------CEKC 51
Query: 61 QEKTAFIFCVEDRALFCQDC 80
+ + C+ + CQ C
Sbjct: 52 SLQPTAVHCMNENVSLCQGC 71
>AT1G68520.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:25709331-25710749 REVERSE LENGTH=406
Length = 406
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 5 CDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLS 51
CD+C K A C AD+A LC CD +H+AN LA +H+R+ L+S S
Sbjct: 17 CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSAS 63
>AT1G25440.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:8933939-8935284 REVERSE LENGTH=417
Length = 417
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 5 CDACEKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLS 51
CD+C K A C AD+A LC CD +H+AN LA +H+R+ L++ S
Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRLKTAS 63
>AT1G73870.1 | Symbols: | B-box type zinc finger protein with CCT
domain | chr1:27779214-27780522 FORWARD LENGTH=392
Length = 392
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 5 CDAC-EKAPATVICCADEAALCAQCDVEIHAANKLASKHQRLLLESLS 51
CDAC +++ A+ C AD+A LC CD IH+AN LA +H+R+ L+S S
Sbjct: 22 CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRLQSSS 69
>AT4G38960.2 | Symbols: | B-box type zinc finger family protein |
chr4:18162300-18163045 FORWARD LENGTH=150
Length = 150
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 36 NKLASKHQRLLLESLSNKLPKCDICQEKTAFIFCVEDRALFCQDCDEPIHAPGSISANHQ 95
NKLAS+H R+ L SN P CDIC+ AF +C D + C CD +H G + H
Sbjct: 3 NKLASRHVRVGLAEPSNA-PCCDICENAPAFFYCEIDGSSLCLQCDMVVHVGGKRT--HG 59
Query: 96 RFL 98
RFL
Sbjct: 60 RFL 62