Miyakogusa Predicted Gene

Lj3g3v0370440.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0370440.1 Non Chatacterized Hit- tr|A5C639|A5C639_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,49.49,1e-17,DUF936,Protein of unknown function DUF936, plant;
FAMILY NOT NAMED,NULL,CUFF.40844.1
         (199 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08760.1 | Symbols:  | Plant protein of unknown function (DUF...   155   2e-38
AT3G14170.1 | Symbols:  | Plant protein of unknown function (DUF...    54   5e-08
AT4G13370.1 | Symbols:  | Plant protein of unknown function (DUF...    50   7e-07

>AT1G08760.1 | Symbols:  | Plant protein of unknown function
           (DUF936) | chr1:2805478-2808409 FORWARD LENGTH=748
          Length = 748

 Score =  155 bits (392), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/194 (49%), Positives = 127/194 (65%), Gaps = 24/194 (12%)

Query: 16  PDYERSKLEEALKLKSERQKHASSWVQAALATNLSSFAVFTREPQSSKLPASSNSQNQKT 75
           PD E ++ EEA+K  SE+QK A+SWVQAAL TNLS F+V++   + +KL AS        
Sbjct: 508 PDNEENRSEEAIKAASEKQKLAASWVQAALVTNLSPFSVYSS--KQAKLAASR------- 558

Query: 76  LMGNQPMLVLHNSSSEDSSSKVPG--KTRQPLYSKHASQGATRKPGDGSANRHKQLV--- 130
              ++P+++L  S   +SSSK  G  + +  + SK  +QG  RK  + S+++    V   
Sbjct: 559 ---SKPVIILE-SPGNNSSSKTRGNIQNKPTIGSKLVAQGMIRKHRENSSSQKATSVAGS 614

Query: 131 -QPPLPEWVRGNGLDEVVNLAEMLQLQSRDWFVGFVERFLDID----GDNTLSDNGQIAG 185
             PPL  WV+GNGL+E  +LAE LQ+ S+DWF+GFVERFLD D       +LSDNGQIAG
Sbjct: 615 ESPPL-NWVKGNGLNEATDLAEKLQMVSQDWFLGFVERFLDADVITSSSLSLSDNGQIAG 673

Query: 186 MLSQLKSVNDWLDE 199
           MLSQLKSVNDWLDE
Sbjct: 674 MLSQLKSVNDWLDE 687


>AT3G14170.1 | Symbols:  | Plant protein of unknown function
           (DUF936) | chr3:4696115-4697989 REVERSE LENGTH=505
          Length = 505

 Score = 54.3 bits (129), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 20/99 (20%)

Query: 114 ATRKPGDGSANRHKQLVQPPLPEWVRGNGLDEVVNLAEMLQLQSRDWFVGFVERFLDIDG 173
           AT KP        K L +    EWV+GNG +E+  L   L+ ++R WF+ F+E  LD   
Sbjct: 374 ATMKPS-------KALTEAEKLEWVKGNGTEEIKELTNTLKRETRSWFLKFLEDALDTGL 426

Query: 174 DNTLSD-------------NGQIAGMLSQLKSVNDWLDE 199
             T+ +             +  IA  LSQLK  N+WL++
Sbjct: 427 HATVPEKKGKTKGARLAEPDNHIAETLSQLKQANEWLEK 465


>AT4G13370.1 | Symbols:  | Plant protein of unknown function
           (DUF936) | chr4:7777916-7780334 REVERSE LENGTH=673
          Length = 673

 Score = 50.4 bits (119), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 137 WVRGNGLDEVVNLAEMLQLQSRDWFVGFVERFLDIDGDNTLS-DNGQIAGMLSQLKSVND 195
           W   +GL E    A  LQ + + WF+ FVE  LD       S D   IA +LSQLK VN+
Sbjct: 570 WTDLDGLKETAKFAVNLQSEMQVWFIEFVEESLDNKNAAKRSLDGSSIAAVLSQLKQVNE 629

Query: 196 WLD 198
           WLD
Sbjct: 630 WLD 632