Miyakogusa Predicted Gene

Lj3g3v0338910.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0338910.1 tr|G7IS24|G7IS24_MEDTR Threonine synthase
OS=Medicago truncatula GN=MTR_2g099510 PE=4 SV=1,91.23,0,Tryptophan
synthase beta subunit-like PLP-dependent enzymes,Tryptophan synthase
beta subunit-like PL,NODE_32551_length_1834_cov_198.504913.path2.1
         (342 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G29840.1 | Symbols: MTO2, TS | Pyridoxal-5'-phosphate-depende...   624   e-179
AT1G72810.1 | Symbols:  | Pyridoxal-5'-phosphate-dependent enzym...   603   e-173

>AT4G29840.1 | Symbols: MTO2, TS | Pyridoxal-5'-phosphate-dependent
           enzyme family protein | chr4:14599434-14601014 REVERSE
           LENGTH=526
          Length = 526

 Score =  624 bits (1610), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 296/336 (88%), Positives = 313/336 (93%)

Query: 1   MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVIGVGCASTGDTSAALSAYCAS 60
           MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKM RPV+GVGCASTGDTSAALSAYCAS
Sbjct: 186 MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSAYCAS 245

Query: 61  AGIPSIVFLPANRISIAQLVQPIANGAFVLSIDTDFDGCMNLIREVTAEHPIYLANSLNS 120
           AGIPSIVFLPAN+IS+AQLVQPIANGAFVLSIDTDFDGCM LIRE+TAE PIYLANSLNS
Sbjct: 246 AGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTDFDGCMKLIREITAELPIYLANSLNS 305

Query: 121 LRLEGQKNAAIEILQQFDWQVPDWVIIPGGNLGNIYAFYKGFQMCKELGLVDKIPRLVCA 180
           LRLEGQK AAIEILQQFDWQVPDWVI+PGGNLGNIYAFYKGF+MC+ELGLVD+IPR+VCA
Sbjct: 306 LRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKMCQELGLVDRIPRMVCA 365

Query: 181 QAANANPLYTYFKSGWKEVQPMTAKKNFASAIQNGDPVSIDRAVLALKNSNGIVEEATEE 240
           QAANANPLY ++KSGWK+ +PMTA   FASAIQ GDPVSIDRAV ALK  NGIVEEATEE
Sbjct: 366 QAANANPLYLHYKSGWKDFKPMTASTTFASAIQIGDPVSIDRAVYALKKCNGIVEEATEE 425

Query: 241 ELMDAMAQADSTGMFACPHTGVALAALFKLRNSGVIKPTDRTVVVSTAHGLKFTQSKIDY 300
           ELMDAMAQADSTGMF CPHTGVAL ALFKLRN GVI PTDRTVVVSTAHGLKFTQSKIDY
Sbjct: 426 ELMDAMAQADSTGMFICPHTGVALTALFKLRNQGVIAPTDRTVVVSTAHGLKFTQSKIDY 485

Query: 301 HSGHIKDMACQFANPPLQVKADFGSVMDVLKKYLKS 336
           HS  I DMAC+F+NPP+ VKADFG+VMDVLK YL S
Sbjct: 486 HSNAIPDMACRFSNPPVDVKADFGAVMDVLKSYLGS 521


>AT1G72810.1 | Symbols:  | Pyridoxal-5'-phosphate-dependent enzyme
           family protein | chr1:27398760-27400393 REVERSE
           LENGTH=516
          Length = 516

 Score =  603 bits (1554), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 292/337 (86%), Positives = 311/337 (92%), Gaps = 1/337 (0%)

Query: 1   MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVIGVGCASTGDTSAALSAYCAS 60
           MNDLWVKHCGISHTGSFKDLGM+VLVSQVNRLRKMN+PVIGVGCASTGDTSAALSAYCAS
Sbjct: 177 MNDLWVKHCGISHTGSFKDLGMSVLVSQVNRLRKMNKPVIGVGCASTGDTSAALSAYCAS 236

Query: 61  AGIPSIVFLPANRISIAQLVQPIANGAFVLSIDTDFDGCMNLIREVTAEHPIYLANSLNS 120
           AGIPSIVFLPA++IS+AQLVQPIANGAFVLSIDTDFDGCM+LIREVTAE PIYLANSLNS
Sbjct: 237 AGIPSIVFLPADKISMAQLVQPIANGAFVLSIDTDFDGCMHLIREVTAELPIYLANSLNS 296

Query: 121 LRLEGQKNAAIEILQQFDWQVPDWVIIPGGNLGNIYAFYKGFQMCKELGLVDKIPRLVCA 180
           LRLEGQK AAIEILQQF+WQVPDWVI+PGGNLGNIYAFYKGF MCKELGLVD+IPRLVCA
Sbjct: 297 LRLEGQKTAAIEILQQFNWQVPDWVIVPGGNLGNIYAFYKGFHMCKELGLVDRIPRLVCA 356

Query: 181 QAANANPLYTYFKSGWKE-VQPMTAKKNFASAIQNGDPVSIDRAVLALKNSNGIVEEATE 239
           QAANANPLY ++KSG+KE   P+ A   FASAIQ GDPVSIDRAV ALK SNGIVEEATE
Sbjct: 357 QAANANPLYLHYKSGFKEDFNPLKANTTFASAIQIGDPVSIDRAVYALKKSNGIVEEATE 416

Query: 240 EELMDAMAQADSTGMFACPHTGVALAALFKLRNSGVIKPTDRTVVVSTAHGLKFTQSKID 299
           EELMDA A ADSTGMF CPHTGVAL AL KLR SGVI   DRTVVVSTAHGLKFTQSKID
Sbjct: 417 EELMDATALADSTGMFICPHTGVALTALMKLRKSGVIGANDRTVVVSTAHGLKFTQSKID 476

Query: 300 YHSGHIKDMACQFANPPLQVKADFGSVMDVLKKYLKS 336
           YHS +IK+MAC+ ANPP++VKA FGSVMDVLK+YLKS
Sbjct: 477 YHSKNIKEMACRLANPPVKVKAKFGSVMDVLKEYLKS 513