Miyakogusa Predicted Gene

Lj3g3v0336700.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0336700.1 tr|G7IS24|G7IS24_MEDTR Threonine synthase
OS=Medicago truncatula GN=MTR_2g099510 PE=4 SV=1,84.14,0,thrC:
threonine synthase,Threonine synthase-like; PALP,Tryptophan synthase
beta subunit-like PLP-dep,CUFF.40632.1
         (527 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G29840.1 | Symbols: MTO2, TS | Pyridoxal-5'-phosphate-depende...   846   0.0  
AT1G72810.1 | Symbols:  | Pyridoxal-5'-phosphate-dependent enzym...   830   0.0  

>AT4G29840.1 | Symbols: MTO2, TS | Pyridoxal-5'-phosphate-dependent
           enzyme family protein | chr4:14599434-14601014 REVERSE
           LENGTH=526
          Length = 526

 Score =  846 bits (2186), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 401/460 (87%), Positives = 430/460 (93%), Gaps = 2/460 (0%)

Query: 62  IRDEARRKKISTGDRHLFSAKYVPFNADPSSTESYSLDEVVYRSQSGGLLDVQHDIAALK 121
           IRDEARR +  +   + FSAKYVPFNA P STESYSLDE+VYRS+SGGLLDV+HD+ ALK
Sbjct: 64  IRDEARRNR--SNAVNPFSAKYVPFNAAPGSTESYSLDEIVYRSRSGGLLDVEHDMEALK 121

Query: 122 AFDGEHWRNLFDSRVGKTTWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFWAERFGK 181
            FDG +WR+LFDSRVGK+TWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFWAERFGK
Sbjct: 122 RFDGAYWRDLFDSRVGKSTWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFWAERFGK 181

Query: 182 RFVDMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVIGVGCASTGDTSAALSA 241
           +F+ MNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKM RPV+GVGCASTGDTSAALSA
Sbjct: 182 QFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMKRPVVGVGCASTGDTSAALSA 241

Query: 242 YCASAGIPSIVFLPANRISIAQLVQPIANGAFVLSIDTDFDGCMHLIREVTAELPIYLAN 301
           YCASAGIPSIVFLPAN+IS+AQLVQPIANGAFVLSIDTDFDGCM LIRE+TAELPIYLAN
Sbjct: 242 YCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDTDFDGCMKLIREITAELPIYLAN 301

Query: 302 SLNSLRLEGQKTAAIEILQQFDWQVPDWVIIPGGNLGNIYAFYKGFQMCKELGLVDKIPR 361
           SLNSLRLEGQKTAAIEILQQFDWQVPDWVI+PGGNLGNIYAFYKGF+MC+ELGLVD+IPR
Sbjct: 302 SLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAFYKGFKMCQELGLVDRIPR 361

Query: 362 LVCAQAANANPLYTYFKSGWKEFQPMTAKTTFASAIQIGDPVSIDRAVLALKNSNGIVEE 421
           +VCAQAANANPLY ++KSGWK+F+PMTA TTFASAIQIGDPVSIDRAV ALK  NGIVEE
Sbjct: 362 MVCAQAANANPLYLHYKSGWKDFKPMTASTTFASAIQIGDPVSIDRAVYALKKCNGIVEE 421

Query: 422 ATEEELMDAMAQADSTGMFACPHTGVALAALFKLRNSGVIKPTDRTVVVSTAHGLKFTQS 481
           ATEEELMDAMAQADSTGMF CPHTGVAL ALFKLRN GVI PTDRTVVVSTAHGLKFTQS
Sbjct: 422 ATEEELMDAMAQADSTGMFICPHTGVALTALFKLRNQGVIAPTDRTVVVSTAHGLKFTQS 481

Query: 482 KIDYHSGHIKDMACQFANPPLQVKADFGSVMDVLKKYLKS 521
           KIDYHS  I DMAC+F+NPP+ VKADFG+VMDVLK YL S
Sbjct: 482 KIDYHSNAIPDMACRFSNPPVDVKADFGAVMDVLKSYLGS 521


>AT1G72810.1 | Symbols:  | Pyridoxal-5'-phosphate-dependent enzyme
           family protein | chr1:27398760-27400393 REVERSE
           LENGTH=516
          Length = 516

 Score =  830 bits (2144), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/461 (86%), Positives = 425/461 (92%), Gaps = 4/461 (0%)

Query: 62  IRDEARRKKISTGDRHLFSAKYVPFNADPSSTESYSLDEVVYRSQSGGLLDVQHDIAALK 121
           IRDEARR+     +    SA+YVPFNA PSSTESYSLDE+VYRSQSG LLDVQHD AALK
Sbjct: 56  IRDEARRRPHQLQN---LSARYVPFNAPPSSTESYSLDEIVYRSQSGALLDVQHDFAALK 112

Query: 122 AFDGEHWRNLFDSRVGKTTWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFWAERFGK 181
            +DGE WRNLFDSRVGKT WPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFWAERFGK
Sbjct: 113 RYDGEFWRNLFDSRVGKTNWPYGSGVWSKKEWVLPEIDDDDIVSAFEGNSNLFWAERFGK 172

Query: 182 RFVDMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKMNRPVIGVGCASTGDTSAALSA 241
           +++ MNDLWVKHCGISHTGSFKDLGM+VLVSQVNRLRKMN+PVIGVGCASTGDTSAALSA
Sbjct: 173 QYLQMNDLWVKHCGISHTGSFKDLGMSVLVSQVNRLRKMNKPVIGVGCASTGDTSAALSA 232

Query: 242 YCASAGIPSIVFLPANRISIAQLVQPIANGAFVLSIDTDFDGCMHLIREVTAELPIYLAN 301
           YCASAGIPSIVFLPA++IS+AQLVQPIANGAFVLSIDTDFDGCMHLIREVTAELPIYLAN
Sbjct: 233 YCASAGIPSIVFLPADKISMAQLVQPIANGAFVLSIDTDFDGCMHLIREVTAELPIYLAN 292

Query: 302 SLNSLRLEGQKTAAIEILQQFDWQVPDWVIIPGGNLGNIYAFYKGFQMCKELGLVDKIPR 361
           SLNSLRLEGQKTAAIEILQQF+WQVPDWVI+PGGNLGNIYAFYKGF MCKELGLVD+IPR
Sbjct: 293 SLNSLRLEGQKTAAIEILQQFNWQVPDWVIVPGGNLGNIYAFYKGFHMCKELGLVDRIPR 352

Query: 362 LVCAQAANANPLYTYFKSGWKE-FQPMTAKTTFASAIQIGDPVSIDRAVLALKNSNGIVE 420
           LVCAQAANANPLY ++KSG+KE F P+ A TTFASAIQIGDPVSIDRAV ALK SNGIVE
Sbjct: 353 LVCAQAANANPLYLHYKSGFKEDFNPLKANTTFASAIQIGDPVSIDRAVYALKKSNGIVE 412

Query: 421 EATEEELMDAMAQADSTGMFACPHTGVALAALFKLRNSGVIKPTDRTVVVSTAHGLKFTQ 480
           EATEEELMDA A ADSTGMF CPHTGVAL AL KLR SGVI   DRTVVVSTAHGLKFTQ
Sbjct: 413 EATEEELMDATALADSTGMFICPHTGVALTALMKLRKSGVIGANDRTVVVSTAHGLKFTQ 472

Query: 481 SKIDYHSGHIKDMACQFANPPLQVKADFGSVMDVLKKYLKS 521
           SKIDYHS +IK+MAC+ ANPP++VKA FGSVMDVLK+YLKS
Sbjct: 473 SKIDYHSKNIKEMACRLANPPVKVKAKFGSVMDVLKEYLKS 513