Miyakogusa Predicted Gene

Lj3g3v0335680.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0335680.1 tr|G7IS30|G7IS30_MEDTR Lipoxygenase OS=Medicago
truncatula GN=MTR_2g099570 PE=3 SV=1,78.18,0,Lipoxygenase homology 2
(beta barrel) domain,Lipoxygenase, LH2; Lipoxigenase,Lipoxygenase,
C-termina,gene.g45129.t1.1
         (373 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G55020.1 | Symbols: LOX1, ATLOX1 | lipoxygenase 1 | chr1:2052...   391   e-109
AT3G22400.1 | Symbols: LOX5 | PLAT/LH2 domain-containing lipoxyg...   325   4e-89
AT1G17420.1 | Symbols: LOX3 | lipoxygenase 3 | chr1:5977512-5981...   220   1e-57
AT1G72520.1 | Symbols: LOX4 | PLAT/LH2 domain-containing lipoxyg...   215   4e-56
AT3G45140.1 | Symbols: LOX2, ATLOX2 | lipoxygenase 2 | chr3:1652...   190   1e-48
AT1G67560.1 | Symbols: LOX6 | PLAT/LH2 domain-containing lipoxyg...   171   6e-43

>AT1G55020.1 | Symbols: LOX1, ATLOX1 | lipoxygenase 1 |
           chr1:20525798-20530143 FORWARD LENGTH=859
          Length = 859

 Score =  391 bits (1005), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 209/420 (49%), Positives = 269/420 (64%), Gaps = 68/420 (16%)

Query: 6   QKIKGTVVLMRKNVLDINSLTSVGGVIGSGLDILGSTVDNLTAFLGRSVSLQLISSTKAD 65
           +K+KGTVVLM+KNVLD N             D   S +D L  FLG  ++L+L+SS   D
Sbjct: 19  KKVKGTVVLMKKNVLDFN-------------DFNASFLDRLHEFLGNKITLRLVSSDVTD 65

Query: 66  G----------------VITSLPTLGAGQSAFKIHFEWDDDFGIPGAFYIKNFMQTEFFL 109
                             IT++ +L AG+SAFK+ F+++ DFG PGAF I+N   +EF L
Sbjct: 66  SENGSKGKLGKAAHLEDWITTITSLTAGESAFKVTFDYETDFGYPGAFLIRNSHFSEFLL 125

Query: 110 VSLILEDIPNHGTIYFVCNSWIYNAKHFKNDRIFFANTPYLPSETPAPLAQYREEELKNL 169
            SL LED+P HG ++++CNSWIY AKH+  DR+FF+N  YLP ETPA L +YREEEL +L
Sbjct: 126 KSLTLEDVPGHGRVHYICNSWIYPAKHYTTDRVFFSNKTYLPHETPATLLKYREEELVSL 185

Query: 170 RGDGTGERKEWERIYDYDVYNDLGDPDK---------------------------DPNSE 202
           RG G GE KEW+R+YDY  YNDLG P K                           DP +E
Sbjct: 186 RGTGEGELKEWDRVYDYAYYNDLGVPPKNPRPVLGGTQEYPYPRRGRTGRKPTKEDPQTE 245

Query: 203 SR-----TSDIYLPRDEAFGHLKSSDFLVYGLKSVSQDVVPALQSVFFDLNFTPNEFDSF 257
           SR     + DIY+PRDE FGHLK SDFL Y LK+++Q + PAL++VF D   TP EFDSF
Sbjct: 246 SRLPITSSLDIYVPRDERFGHLKMSDFLAYALKAIAQFIQPALEAVFDD---TPKEFDSF 302

Query: 258 DEVHGLYDGGIKLPTNVL----SKISPLPVLKEVFRTDGEQALKFPPPKVVQATKSAWMT 313
           ++V  +Y+ GI LP   L     K  PL +LKE+FRTDG++ LKFP P+V++  K+AW T
Sbjct: 303 EDVLKIYEEGIDLPNQALIDSIVKNIPLEMLKEIFRTDGQKFLKFPVPQVIKEDKTAWRT 362

Query: 314 DEEFAREMLAGVNPNVIRCLKVFPPPSKLDSQVYGDHTSKITKEHLEPNLEGLTVDQMFQ 373
           DEEFAREMLAG+NP VI+ LK FPP SKLDS+ YG+  S ITK H+E NL+GLTV++  +
Sbjct: 363 DEEFAREMLAGLNPVVIQLLKEFPPKSKLDSESYGNQNSTITKSHIEHNLDGLTVEEALE 422


>AT3G22400.1 | Symbols: LOX5 | PLAT/LH2 domain-containing
           lipoxygenase family protein | chr3:7927011-7931167
           FORWARD LENGTH=886
          Length = 886

 Score =  325 bits (832), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 186/427 (43%), Positives = 249/427 (58%), Gaps = 76/427 (17%)

Query: 7   KIKGTVVLMRKNVLDINSLTSVGGVIGSGLDILGSTVDNLTAFLGRSVSLQLISSTKADG 66
           KI+G VV+M+KN+LD               D++ S +D +   LGR VSL LISS + D 
Sbjct: 34  KIEGEVVVMKKNLLDFK-------------DVMASLLDRVNELLGRRVSLHLISSHQPDP 80

Query: 67  V----------------ITSLPT-LGAGQSAFKIHFEWDDDFGIPGAFYIKNFMQTEFFL 109
                            +T + T + A ++AF + F+WD+  G P AF IKN   ++F+L
Sbjct: 81  ANEKRGRLGKAAHLEKWVTKIKTSVTAEETAFGVTFDWDESMGPPAAFVIKNHHHSQFYL 140

Query: 110 VSLILEDIPN----HGTIYFVCNSWIYNAKHFKNDRIFFANTPYLPSETPAPLAQYREEE 165
            SL L   P+       I+F+CNSWIY    +++DR+FF+N  YLPSETP  + + REEE
Sbjct: 141 KSLTLRGFPDGEGGATAIHFICNSWIYPNHRYRSDRVFFSNKAYLPSETPELIKELREEE 200

Query: 166 LKNLRGDGTG-ERKEWERIYDYDVYNDLGDPDK--------------------------- 197
           LKNLRG+  G E KEW+R+YDY  YNDLG PDK                           
Sbjct: 201 LKNLRGNEKGGEFKEWDRVYDYAYYNDLGAPDKGPDSVRPVLGGSPELPYPRRGKTGRKS 260

Query: 198 ---DPNSESRTS----DIYLPRDEAFGHLKSSDFLVYGLKSVSQDVVPALQSVFFDLNFT 250
              DP SESR +    +IY+PRDE F H+K SDFL Y LKSV+Q +VP + SV    + T
Sbjct: 261 TKSDPKSESRLALLNLNIYVPRDERFSHVKFSDFLAYALKSVTQVLVPEIASV---CDKT 317

Query: 251 PNEFDSFDEVHGLYDGGIKLPT-NVLSKIS---PLPVLKEVFRTDGEQALKFPPPKVVQA 306
            NEFDSF++V  LYDG IKL   + +SK+    P  + +E+ R DGE+ LK+P P +++ 
Sbjct: 318 INEFDSFEDVFHLYDGSIKLANGHTISKLRDVIPWEMFRELVRNDGERFLKYPLPDILKE 377

Query: 307 TKSAWMTDEEFAREMLAGVNPNVIRCLKVFPPPSKLDSQVYGDHTSKITKEHLEPNLEGL 366
           ++SAW TDEEFAREMLAG+NP VI  L+ FPP S LDS  YG+  S I  EH+E N+ GL
Sbjct: 378 SRSAWRTDEEFAREMLAGLNPVVISRLQEFPPKSCLDSAKYGNQHSSIRTEHIESNMNGL 437

Query: 367 TVDQMFQ 373
            V +  +
Sbjct: 438 NVQEALE 444


>AT1G17420.1 | Symbols: LOX3 | lipoxygenase 3 | chr1:5977512-5981384
           FORWARD LENGTH=919
          Length = 919

 Score =  220 bits (560), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 139/389 (35%), Positives = 207/389 (53%), Gaps = 58/389 (14%)

Query: 37  DILGSTVDNLTAF---LGRSVSLQLISS---------TKADGVITSLPTLGAGQSAFKIH 84
           D+  + V +L AF   +GR++ L+LIS+          K++  +    +  +   A ++H
Sbjct: 99  DLKETLVKHLDAFADKIGRNIVLELISTQLDPKTKLPKKSNAAVLKDWSKKSKTKAERVH 158

Query: 85  ----FEWDDDFGIPGAFYIKNFMQTEFFLVSLILEDIPNHGTIYFVCNSWIYNAKHFKND 140
               F  D  FG PGA  + N  Q EFFL S+ +E     G ++F CNSW+ + K   + 
Sbjct: 159 YTAEFTVDAAFGSPGAITVMNKHQKEFFLESITIEGF-ALGPVHFPCNSWVQSQKDHPDK 217

Query: 141 RIFFANTPYLPSETPAPLAQYREEELKNLRGDGTGERKEWERIYDYDVYNDLGDPDK--- 197
           RIFF N PYLP+ETP+ L   RE+ELKNLRGDG+G RK  +RIYD+DVYNDLG+PDK   
Sbjct: 218 RIFFTNQPYLPNETPSGLRVLREKELKNLRGDGSGVRKLSDRIYDFDVYNDLGNPDKSSE 277

Query: 198 --------------------------DPNSESRTSD---IYLPRDEAFGHLKSSDFLVYG 228
                                     D ++ESR      +Y+PRDE F   K   F    
Sbjct: 278 LSRPKLGGKEVPYPRRCRTGRQSTVSDKDAESRVEKPLPMYVPRDEQFEESKQDTFAAGR 337

Query: 229 LKSVSQDVVPALQSVFFDLNFTPNEFDSFDEVHGLYDGGIKLPTNV---LSKISPLP-VL 284
           LK+V   ++P+L++     +    +F  F E+  LY  G+ L       + K  PLP V+
Sbjct: 338 LKAVLHHLIPSLKA-----SIVAEDFADFGEIDRLYKEGLLLKLGFQDDIFKKFPLPKVV 392

Query: 285 KEVFRTDGEQALKFPPPKVVQATKSAWMTDEEFAREMLAGVNPNVIRCLKVFPPPSKLDS 344
            +  +   +  LK+  PK++   K+AW+ D+EFAR+ +AG+NP  I  +K FPP S LD 
Sbjct: 393 VDTLQESTKGLLKYDTPKILSKDKNAWLRDDEFARQAIAGINPVNIERVKTFPPVSNLDP 452

Query: 345 QVYGDHTSKITKEHLEPNLEGLTVDQMFQ 373
           ++YG   S +T +H+  +L+G +V Q  +
Sbjct: 453 KIYGPQHSALTDDHIIGHLDGFSVQQALE 481


>AT1G72520.1 | Symbols: LOX4 | PLAT/LH2 domain-containing
           lipoxygenase family protein | chr1:27308611-27312589
           FORWARD LENGTH=926
          Length = 926

 Score =  215 bits (547), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 135/386 (34%), Positives = 199/386 (51%), Gaps = 55/386 (14%)

Query: 37  DILGSTVDNLTAFLGRSVSLQLISST---------KADGVITSLPTLGAGQSAFKIH--- 84
           + L   +D  T  +GR+V L+L+S+          K+   +    +  +   A ++H   
Sbjct: 108 ETLVKHLDAFTDKIGRNVVLELMSTQVDPKTNEPKKSKAAVLKDWSKKSNSKAERVHYTA 167

Query: 85  -FEWDDDFGIPGAFYIKNFMQTEFFLVSLILEDIPNHGTIYFVCNSWIYNAKHFKNDRIF 143
            F  D  FG PGA  + N  Q EFFL S+ +E     G ++F CNSW+ + K   + RI 
Sbjct: 168 EFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFAC-GPVHFPCNSWVQSQKDHPSKRIL 226

Query: 144 FANTPYLPSETPAPLAQYREEELKNLRGDGTGERKEWERIYDYDVYNDLGDPD------- 196
           F N PYLPSETP+ L   RE+EL+NLRG+G GERK  +RIYDYDVYND+G+PD       
Sbjct: 227 FTNQPYLPSETPSGLRTLREKELENLRGNGKGERKLSDRIYDYDVYNDIGNPDISRELAR 286

Query: 197 ----------------------KDPNSESRTSD---IYLPRDEAFGHLKSSDFLVYGLKS 231
                                  D  SE R      +Y+PRDE F   K + F    LK+
Sbjct: 287 PTLGGREFPYPRRCRTGRSSTDTDMMSERRVEKPLPMYVPRDEQFEESKQNTFAACRLKA 346

Query: 232 VSQDVVPALQSVFFDLNFTPNEFDSFDEVHGLYDGGIKLPTNV---LSKISPLPVLKEVF 288
           V  +++P+L++     +    +F +F E+  LY  G+ L       + K  PLP +    
Sbjct: 347 VLHNLIPSLKA-----SILAEDFANFGEIDSLYKEGLLLKLGFQDDMFKKFPLPKIVTTL 401

Query: 289 RTDGEQALKFPPPKVVQATKSAWMTDEEFAREMLAGVNPNVIRCLKVFPPPSKLDSQVYG 348
           +   E  L++  PK+V   K AW+ D+EFAR+ +AG+NP  I  +  +PP S LD ++YG
Sbjct: 402 QKSSEGLLRYDTPKIVSKDKYAWLRDDEFARQAIAGINPVNIERVTSYPPVSNLDPEIYG 461

Query: 349 DHT-SKITKEHLEPNLEGLTVDQMFQ 373
               S +T++H+   L+GLTV Q  +
Sbjct: 462 PGLHSALTEDHIIGQLDGLTVQQALE 487


>AT3G45140.1 | Symbols: LOX2, ATLOX2 | lipoxygenase 2 |
           chr3:16525437-16529233 FORWARD LENGTH=896
          Length = 896

 Score =  190 bits (483), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/374 (35%), Positives = 196/374 (52%), Gaps = 54/374 (14%)

Query: 43  VDNLTAFLGRSVSLQLISSTKADGVIT-----SLPTLGAGQSAFKIHFEWDDDFGIPGAF 97
           +D++    GRS+ ++LIS+ K D  IT           A    ++  FE  +DFG  GA 
Sbjct: 95  LDDIADIRGRSLLVELISA-KTDQRITVEDYAQRVWAEAPDEKYECEFEMPEDFGPVGAI 153

Query: 98  YIKNFMQTEFFLVSLILEDIPNHGTIYFVCNSWIYNAKHFKNDRIFFANTPYLPSETPAP 157
            I+N    + FL  + L+ +P  G+I F C SW+         RIFF++  YLPS+TP P
Sbjct: 154 KIQNQYHRQLFLKGVELK-LPG-GSITFTCESWVAPKSVDPTKRIFFSDKSYLPSQTPEP 211

Query: 158 LAQYREEELKNLRG---DGTGERKEWERIYDYDVYNDLGDPDKDP--------------- 199
           L +YR+EEL+ L+G   +  GE  ++ERIYDYDVYND+GDPD DP               
Sbjct: 212 LKKYRKEELETLQGKNREEVGEFTKFERIYDYDVYNDVGDPDNDPELARPVIGGLTHPYP 271

Query: 200 --------------NSESRTS-DIYLPRDEAFGHLKSSDFLVYGLKSVSQDVVPALQSVF 244
                         +SE R   + Y+PRDE F   K + F    + +    + P ++SV 
Sbjct: 272 RRCKTGRKPCETDPSSEQRYGGEFYVPRDEEFSTAKGTSFTGKAVLAALPSIFPQIESVL 331

Query: 245 FDLNFTPNE-FDSFDEVHGLYDGGIKLPTNVLSKISPLPVLKEVFRTDGEQA---LKFPP 300
                +P E F  F  +  L++ GI+LP +       LP+L  + +  GE     L+F  
Sbjct: 332 L----SPQEPFPHFKAIQNLFEEGIQLPKDA----GLLPLLPRIIKALGEAQDDILQFDA 383

Query: 301 PKVVQATKSAWMTDEEFAREMLAGVNPNVIRCLKVFPPPSKLDSQVYGDHTSKITKEHLE 360
           P ++   + +W+ D+EFAR+ LAG+NP  I+ ++ +P  SKLD  VYGD TS IT E +E
Sbjct: 384 PVLINRDRFSWLRDDEFARQTLAGLNPYSIQLVEEWPLISKLDPAVYGDPTSLITWEIVE 443

Query: 361 PNLEG-LTVDQMFQ 373
             ++G +TVD+  +
Sbjct: 444 REVKGNMTVDEALK 457


>AT1G67560.1 | Symbols: LOX6 | PLAT/LH2 domain-containing
           lipoxygenase family protein | chr1:25319926-25324117
           FORWARD LENGTH=917
          Length = 917

 Score =  171 bits (434), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 112/325 (34%), Positives = 158/325 (48%), Gaps = 51/325 (15%)

Query: 90  DFGIPGAFYIKNFMQTEFFLVSLILEDIPNHGTIYFVCNSWIYNAKHFKNDRIFFANTPY 149
           +FG PGA  + N + TE  L  +I+ED  +  TI F  N+WI++       RI F + P 
Sbjct: 163 NFGKPGAILVTNLLSTEICLSEIIIED--STDTILFPANTWIHSKNDNPQARIIFRSQPC 220

Query: 150 LPSETPAPLAQYREEELKNLRGDGTGERKEWERIYDYDVYNDLGDP-------------- 195
           LPSETP  + + RE++L ++RGDG GERK  ERIYDYDVYNDLGDP              
Sbjct: 221 LPSETPDGIKELREKDLVSVRGDGKGERKPHERIYDYDVYNDLGDPRKTERVRPVLGVPE 280

Query: 196 --------------DKDPNSESR---TSDIYLPRDEAFGHLKSSDFLVYGLKSVSQDVVP 238
                          KDP  ESR     + Y+PRDE F  +K   F     K++  ++VP
Sbjct: 281 TPYPRRCRTGRPLVSKDPPCESRGKEKEEFYVPRDEVFEEIKRDTFRAGRFKALFHNLVP 340

Query: 239 ALQSVFFDLNFTPNEFDSFDEVHGLYDGGIKLPTNVLSKISP--------LPVLKEVFRT 290
           ++ +   +L+     F  F ++  LY   I     VL    P        +         
Sbjct: 341 SIAAALSNLDIP---FTCFSDIDNLYKSNI-----VLGHTEPKDTGLGGFIGGFMNGILN 392

Query: 291 DGEQALKFPPPKVVQATKSAWMTDEEFAREMLAGVNPNVIRCLKVFPPPSKLDSQVYGDH 350
             E  LK+  P V++  + AW+ D EF R+ LAGVNP  I  LK  P  S LD  +YG  
Sbjct: 393 VTETLLKYDTPAVIKWDRFAWLRDNEFGRQALAGVNPVNIELLKELPIRSNLDPALYGPQ 452

Query: 351 TSKITKEHLEPNLE--GLTVDQMFQ 373
            S +T+E +   +E  G T+++  +
Sbjct: 453 ESVLTEEIIAREVEHYGTTIEKALE 477