Miyakogusa Predicted Gene
- Lj3g3v0323560.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0323560.1 Non Chatacterized Hit- tr|I1KG92|I1KG92_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57656 PE,59.18,0,"Winged
helix" DNA-binding domain,NULL; Homeodomain-like,Homeodomain-like;
HTH_MYB,Myb domain; H15,H,CUFF.40534.1
(285 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G72740.2 | Symbols: | Homeodomain-like/winged-helix DNA-bind... 194 5e-50
AT1G72740.1 | Symbols: | Homeodomain-like/winged-helix DNA-bind... 189 3e-48
AT1G17520.1 | Symbols: | Homeodomain-like/winged-helix DNA-bind... 180 8e-46
AT1G49950.1 | Symbols: TRB1, ATTRB1 | telomere repeat binding fa... 117 6e-27
AT1G49950.2 | Symbols: TRB1, ATTRB1 | telomere repeat binding fa... 117 6e-27
AT1G49950.3 | Symbols: TRB1, ATTRB1 | telomere repeat binding fa... 117 6e-27
AT3G49850.1 | Symbols: TRB3, ATTRB3, TBP2 | telomere repeat bind... 107 9e-24
AT5G67580.2 | Symbols: TRB2, ATTRB2, TBP3, ATTBP3 | Homeodomain-... 107 9e-24
AT5G67580.1 | Symbols: TRB2, ATTRB2, TBP3, ATTBP3 | Homeodomain-... 107 9e-24
AT1G54260.1 | Symbols: | winged-helix DNA-binding transcription... 82 5e-16
AT1G54240.1 | Symbols: | winged-helix DNA-binding transcription... 61 9e-10
AT2G30620.2 | Symbols: | winged-helix DNA-binding transcription... 56 3e-08
AT1G17460.1 | Symbols: TRFL3 | TRF-like 3 | chr1:5999519-6002546... 56 3e-08
AT2G18050.1 | Symbols: HIS1-3 | histone H1-3 | chr2:7846095-7846... 56 3e-08
AT1G17460.2 | Symbols: TRFL3 | TRF-like 3 | chr1:5999519-6002546... 56 4e-08
AT2G30620.1 | Symbols: | winged-helix DNA-binding transcription... 55 4e-08
AT1G72650.2 | Symbols: TRFL6 | TRF-like 6 | chr1:27350253-273534... 54 2e-07
AT1G72650.1 | Symbols: TRFL6 | TRF-like 6 | chr1:27350253-273534... 54 2e-07
AT2G18050.2 | Symbols: HIS1-3 | histone H1-3 | chr2:7846254-7846... 52 5e-07
AT1G54230.1 | Symbols: | Winged helix-turn-helix transcription ... 51 1e-06
>AT1G72740.2 | Symbols: | Homeodomain-like/winged-helix DNA-binding
family protein | chr1:27380499-27382687 REVERSE
LENGTH=281
Length = 281
Score = 194 bits (493), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 169/289 (58%), Gaps = 12/289 (4%)
Query: 1 MGNQKQKWTAEEEDALHRGVQKYGAGKWKNILKDPEFAPSLTSRSNIDLKDKWRNLNVVT 60
MGNQK KWTAEEE+AL G++K+G GKWKNIL+DPEFA L RSNIDLKDKWRNL+V
Sbjct: 1 MGNQKLKWTAEEEEALLAGIRKHGPGKWKNILRDPEFADQLIHRSNIDLKDKWRNLSVPP 60
Query: 61 G-QGSNIKSRTSKPKLTAPSTPVPNQQNATPSVQNVATPKVPTPSQNSAEK---DHEAKV 116
G Q K+R +K K TP + +A + + T P + + D K
Sbjct: 61 GTQSLTNKARPAKVKEEG-DTPAADANDAVTIPRPIPTIPPPPGRRTLPSELIPDENTKN 119
Query: 117 PPRYNAMIFEALSSIKDADGSDMNAIVSFIEQKHTNTLHQNFRKALGARLRKLVHQGKLE 176
PRY+ +IFEALS++ D +GSD+++I FIE +H + NFR+ L RLR+L Q KLE
Sbjct: 120 APRYDGVIFEALSALADGNGSDVSSIYHFIEPRH--EVPPNFRRILSTRLRRLAAQSKLE 177
Query: 177 KVQNCYKIKKDTPSGPRLPSPKSPVPEQKDLRPQQSPTSSFVTCNEIIKXXXXXXXXXXX 236
K+QN YKI PSG ++ PK P++ + +Q+ + ++I+
Sbjct: 178 KIQNFYKIPD--PSGTKIGVPK---PKETHTKLRQANNQTSADSQQMIEEAAITAACKVV 232
Query: 237 XXENKSFLAAEAMREVERISRLAEDTVSTLQLVKEIYEKCSRGEIVLLA 285
ENK +A A E E+++++AE+ L + E++E CS GE +LLA
Sbjct: 233 EAENKIDVAKLAAEEFEKMTKIAEENRKLLVIATEMHELCSCGETMLLA 281
>AT1G72740.1 | Symbols: | Homeodomain-like/winged-helix DNA-binding
family protein | chr1:27380499-27382687 REVERSE
LENGTH=287
Length = 287
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 121/295 (41%), Positives = 169/295 (57%), Gaps = 18/295 (6%)
Query: 1 MGNQKQKWTAEEEDALHRGVQKYGAGKWKNILKDPEFAPSLTSRSNIDLKDKWRNLNVVT 60
MGNQK KWTAEEE+AL G++K+G GKWKNIL+DPEFA L RSNIDLKDKWRNL+V
Sbjct: 1 MGNQKLKWTAEEEEALLAGIRKHGPGKWKNILRDPEFADQLIHRSNIDLKDKWRNLSVPP 60
Query: 61 G-QGSNIKSRTSKPKLTAPSTPVPNQQNATPSVQNVATPKVPTPSQNSAEK---DHEAKV 116
G Q K+R +K K TP + +A + + T P + + D K
Sbjct: 61 GTQSLTNKARPAKVKEEG-DTPAADANDAVTIPRPIPTIPPPPGRRTLPSELIPDENTKN 119
Query: 117 PPRYNAMIFEALSSIKDADGSDMNAIVSFIEQKHTNTLHQNFRKALGARLRKLVHQGKLE 176
PRY+ +IFEALS++ D +GSD+++I FIE +H + NFR+ L RLR+L Q KLE
Sbjct: 120 APRYDGVIFEALSALADGNGSDVSSIYHFIEPRH--EVPPNFRRILSTRLRRLAAQSKLE 177
Query: 177 KV------QNCYKIKKDTPSGPRLPSPKSPVPEQKDLRPQQSPTSSFVTCNEIIKXXXXX 230
KV QN YKI PSG ++ PK P++ + +Q+ + ++I+
Sbjct: 178 KVSTFKSIQNFYKIPD--PSGTKIGVPK---PKETHTKLRQANNQTSADSQQMIEEAAIT 232
Query: 231 XXXXXXXXENKSFLAAEAMREVERISRLAEDTVSTLQLVKEIYEKCSRGEIVLLA 285
ENK +A A E E+++++AE+ L + E++E CS GE +LLA
Sbjct: 233 AACKVVEAENKIDVAKLAAEEFEKMTKIAEENRKLLVIATEMHELCSCGETMLLA 287
>AT1G17520.1 | Symbols: | Homeodomain-like/winged-helix DNA-binding
family protein | chr1:6024959-6027224 REVERSE LENGTH=296
Length = 296
Score = 180 bits (457), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 126/300 (42%), Positives = 174/300 (58%), Gaps = 21/300 (7%)
Query: 1 MGNQKQKWTAEEEDALHRGVQKYGAGKWKNILKDPEFAPSLTSRSNIDLKDKWRNLNVVT 60
MGNQK KWTAEEE+AL GV+K+G GKWKNIL+DPE A L+SRSNIDLKDKWRNL+V
Sbjct: 1 MGNQKLKWTAEEEEALLAGVRKHGPGKWKNILRDPELAEQLSSRSNIDLKDKWRNLSVAP 60
Query: 61 G-QGSNIKSRTSKPKLTAPSTPVPNQQN-ATPSVQNVATPKVPTPSQNSAEKDHEA---- 114
G QGS K RT K K A TP+ ++P P S++ +
Sbjct: 61 GIQGSKDKIRTPKIKAAAFHLAAAAAAAIVTPTHSGHSSPVATLPRSGSSDLSIDDSFNI 120
Query: 115 ----KVPPRYNAMIFEALSSIKDADGSDMNAIVSFIEQKHTNTLHQNFRKALGARLRKLV 170
K PRY+ MIFEALS++ DA+GSD++AI +FIEQ+ + NFR+ L +RLR+L
Sbjct: 121 VVDPKNAPRYDGMIFEALSNLTDANGSDVSAIFNFIEQRQ--EVPPNFRRMLSSRLRRLA 178
Query: 171 HQGKLEKV------QNCYKIKKDTPSGPRLPSPKSPVPEQKDLRPQQSPTSSFVTCNEII 224
QGKLEKV QN YK+ D R +P P++ + + +Q S + ++ I
Sbjct: 179 AQGKLEKVSHLKSTQNFYKM-NDNSLVQR--TPHVARPKESNTKSRQQTNSQGPSISQQI 235
Query: 225 KXXXXXXXXXXXXXENKSFLAAEAMREVERISRLAEDTVSTLQLVKEIYEKCSRGEIVLL 284
ENK ++ A E+ER+ +LAE+ L + +E++E+CS+G+I+ L
Sbjct: 236 VEASITAAYKLVEVENKLDVSKGAAEEIERLMKLAEEADEMLVIAREMHEECSQGKIMYL 295
>AT1G49950.1 | Symbols: TRB1, ATTRB1 | telomere repeat binding
factor 1 | chr1:18494439-18496713 REVERSE LENGTH=300
Length = 300
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 115/205 (56%), Gaps = 33/205 (16%)
Query: 1 MGNQKQKWTAEEEDALHRGVQKYGAGKWKNILKDPEFAPSLTSRSNIDLKDKWRNLNVVT 60
MG KQKWT EEE AL GV K+G GKW+ ILKDPEF+ L RSN+DLKDKWRN++V+
Sbjct: 1 MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMA 60
Query: 61 -GQGSNIKSRTSKPKLTAPSTPVPNQQNATPSVQNVATPKVPTPSQNSAEKDHEAKV--- 116
G GS KSR + + + +P Q+ + ++ N S S E++ +A
Sbjct: 61 NGWGSREKSRLAVKR----TFSLPKQEENSLALTN---------SLQSDEENVDATSGLQ 107
Query: 117 ----PP------RYNAMIFEALSSIKDADGSDMNAIVSFIEQKHTNTLHQ--NFRKALGA 164
PP R +++I EA++++K+ G + I ++IE ++ H +F++ L
Sbjct: 108 VSSNPPPRRPNVRLDSLIMEAIATLKEPGGCNKTTIGAYIEDQY----HAPPDFKRLLST 163
Query: 165 RLRKLVHQGKLEKVQNCYKIKKDTP 189
+L+ L GKL KV+ Y+I TP
Sbjct: 164 KLKYLTSCGKLVKVKRKYRIPNSTP 188
>AT1G49950.2 | Symbols: TRB1, ATTRB1 | telomere repeat binding
factor 1 | chr1:18494439-18496713 REVERSE LENGTH=300
Length = 300
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 115/205 (56%), Gaps = 33/205 (16%)
Query: 1 MGNQKQKWTAEEEDALHRGVQKYGAGKWKNILKDPEFAPSLTSRSNIDLKDKWRNLNVVT 60
MG KQKWT EEE AL GV K+G GKW+ ILKDPEF+ L RSN+DLKDKWRN++V+
Sbjct: 1 MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMA 60
Query: 61 -GQGSNIKSRTSKPKLTAPSTPVPNQQNATPSVQNVATPKVPTPSQNSAEKDHEAKV--- 116
G GS KSR + + + +P Q+ + ++ N S S E++ +A
Sbjct: 61 NGWGSREKSRLAVKR----TFSLPKQEENSLALTN---------SLQSDEENVDATSGLQ 107
Query: 117 ----PP------RYNAMIFEALSSIKDADGSDMNAIVSFIEQKHTNTLHQ--NFRKALGA 164
PP R +++I EA++++K+ G + I ++IE ++ H +F++ L
Sbjct: 108 VSSNPPPRRPNVRLDSLIMEAIATLKEPGGCNKTTIGAYIEDQY----HAPPDFKRLLST 163
Query: 165 RLRKLVHQGKLEKVQNCYKIKKDTP 189
+L+ L GKL KV+ Y+I TP
Sbjct: 164 KLKYLTSCGKLVKVKRKYRIPNSTP 188
>AT1G49950.3 | Symbols: TRB1, ATTRB1 | telomere repeat binding
factor 1 | chr1:18494439-18496713 REVERSE LENGTH=300
Length = 300
Score = 117 bits (294), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/205 (37%), Positives = 115/205 (56%), Gaps = 33/205 (16%)
Query: 1 MGNQKQKWTAEEEDALHRGVQKYGAGKWKNILKDPEFAPSLTSRSNIDLKDKWRNLNVVT 60
MG KQKWT EEE AL GV K+G GKW+ ILKDPEF+ L RSN+DLKDKWRN++V+
Sbjct: 1 MGAPKQKWTQEEESALKSGVIKHGPGKWRTILKDPEFSGVLYLRSNVDLKDKWRNMSVMA 60
Query: 61 -GQGSNIKSRTSKPKLTAPSTPVPNQQNATPSVQNVATPKVPTPSQNSAEKDHEAKV--- 116
G GS KSR + + + +P Q+ + ++ N S S E++ +A
Sbjct: 61 NGWGSREKSRLAVKR----TFSLPKQEENSLALTN---------SLQSDEENVDATSGLQ 107
Query: 117 ----PP------RYNAMIFEALSSIKDADGSDMNAIVSFIEQKHTNTLHQ--NFRKALGA 164
PP R +++I EA++++K+ G + I ++IE ++ H +F++ L
Sbjct: 108 VSSNPPPRRPNVRLDSLIMEAIATLKEPGGCNKTTIGAYIEDQY----HAPPDFKRLLST 163
Query: 165 RLRKLVHQGKLEKVQNCYKIKKDTP 189
+L+ L GKL KV+ Y+I TP
Sbjct: 164 KLKYLTSCGKLVKVKRKYRIPNSTP 188
>AT3G49850.1 | Symbols: TRB3, ATTRB3, TBP2 | telomere repeat binding
factor 3 | chr3:18489451-18490731 FORWARD LENGTH=295
Length = 295
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 109/202 (53%), Gaps = 29/202 (14%)
Query: 1 MGNQKQKWTAEEEDALHRGVQKYGAGKWKNILKDPEFAPSLTSRSNIDLKDKWRNLNVVT 60
MG K KWT EEE AL GV K+G GKW+ IL DP ++ L SRSN+DLKDKWRN++V
Sbjct: 1 MGAPKLKWTPEEETALKAGVLKHGTGKWRTILSDPVYSTILKSRSNVDLKDKWRNISVTA 60
Query: 61 GQGSNIKSRTSKPKLTAPSTPVPNQQ---NATP-SVQNVATPKV-------PTPSQNSAE 109
GS K KL TP+ + NAT ++ ++A V P+P S E
Sbjct: 61 LWGSR-----KKAKLALKRTPLSGSRQDDNATAITIVSLANGDVGGQQIDAPSPPAGSCE 115
Query: 110 KDHEAKVPPR----YNAMIFEALSSIKDADGSDMNAIVSFIEQKHTNTLHQNFRKALGAR 165
PPR + +I EA++S+K G D +I+ +IE+ + + ++ + +R
Sbjct: 116 -------PPRPSTSVDKIILEAITSLKRPFGPDGKSILMYIEENF--KMQPDMKRLVTSR 166
Query: 166 LRKLVHQGKLEKVQNCYKIKKD 187
L+ L + G L K ++ Y+I ++
Sbjct: 167 LKYLTNVGTLVKKKHKYRISQN 188
>AT5G67580.2 | Symbols: TRB2, ATTRB2, TBP3, ATTBP3 |
Homeodomain-like/winged-helix DNA-binding family protein
| chr5:26955843-26957073 REVERSE LENGTH=299
Length = 299
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 105/205 (51%), Gaps = 10/205 (4%)
Query: 1 MGNQKQKWTAEEEDALHRGVQKYGAGKWKNILKDPEFAPSLTSRSNIDLKDKWRNLNVVT 60
MG KQKWT EEE AL GV K+G GKW+ IL D EF+ L SRSN+DLKDKWRN++V
Sbjct: 1 MGAPKQKWTPEEEAALKAGVLKHGTGKWRTILSDTEFSLILKSRSNVDLKDKWRNISVTA 60
Query: 61 GQGSNIKSRTSKPKLTAPSTPVPNQQNATPSV------QNVATPKVPTPSQNSAEKDHEA 114
GS K++ + K T P T + A V + S
Sbjct: 61 LWGSRKKAKLA-LKRTPPGTKQDDNNTALTIVALTNDDERAKPTSPGGSGGGSPRTCASK 119
Query: 115 KVPPRYNAMIFEALSSIKDADGSDMNAIVSFIEQKHTNTLHQNFRKALGARLRKLVHQGK 174
+ + +IFEA++++++ GSD +I +IE+ N ++ + RL+ L G
Sbjct: 120 RSITSLDKIIFEAITNLRELRGSDRTSIFLYIEENFKTP--PNMKRHVAVRLKHLSSNGT 177
Query: 175 LEKVQNCYKIKKD-TPSGPRLPSPK 198
L K+++ Y+ + P+G R +P+
Sbjct: 178 LVKIKHKYRFSSNFIPAGARQKAPQ 202
>AT5G67580.1 | Symbols: TRB2, ATTRB2, TBP3, ATTBP3 |
Homeodomain-like/winged-helix DNA-binding family protein
| chr5:26955843-26957073 REVERSE LENGTH=299
Length = 299
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 105/205 (51%), Gaps = 10/205 (4%)
Query: 1 MGNQKQKWTAEEEDALHRGVQKYGAGKWKNILKDPEFAPSLTSRSNIDLKDKWRNLNVVT 60
MG KQKWT EEE AL GV K+G GKW+ IL D EF+ L SRSN+DLKDKWRN++V
Sbjct: 1 MGAPKQKWTPEEEAALKAGVLKHGTGKWRTILSDTEFSLILKSRSNVDLKDKWRNISVTA 60
Query: 61 GQGSNIKSRTSKPKLTAPSTPVPNQQNATPSV------QNVATPKVPTPSQNSAEKDHEA 114
GS K++ + K T P T + A V + S
Sbjct: 61 LWGSRKKAKLA-LKRTPPGTKQDDNNTALTIVALTNDDERAKPTSPGGSGGGSPRTCASK 119
Query: 115 KVPPRYNAMIFEALSSIKDADGSDMNAIVSFIEQKHTNTLHQNFRKALGARLRKLVHQGK 174
+ + +IFEA++++++ GSD +I +IE+ N ++ + RL+ L G
Sbjct: 120 RSITSLDKIIFEAITNLRELRGSDRTSIFLYIEENFKTP--PNMKRHVAVRLKHLSSNGT 177
Query: 175 LEKVQNCYKIKKD-TPSGPRLPSPK 198
L K+++ Y+ + P+G R +P+
Sbjct: 178 LVKIKHKYRFSSNFIPAGARQKAPQ 202
>AT1G54260.1 | Symbols: | winged-helix DNA-binding transcription
factor family protein | chr1:20257340-20259176 FORWARD
LENGTH=197
Length = 197
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 101/197 (51%), Gaps = 36/197 (18%)
Query: 119 RYNAMIFEALSSIKDADGSDMNAIVSFIEQKHTNTLHQNFRKALGARLRKLVHQGKLEKV 178
RY+AM+FEA+S+I D +GS++ I+ FIE +H + QNF+K L L LV Q KL+KV
Sbjct: 6 RYDAMVFEAVSTINDENGSNLKEILRFIEGQH--EVPQNFKKLLSYSLGILVSQDKLKKV 63
Query: 179 QNCYKIK-------------KDTPSGPRLPSPKSPVPEQKDLRPQQSPTSSFVTC----- 220
+N YKI KD+ P LP+ EQ+D R S +
Sbjct: 64 RNRYKISVTKAIKPTLTLRPKDSTKPPELPNWYE---EQQDFRMFLSECLIILVSQGKLE 120
Query: 221 ------------NEIIKXXXXXXXXXXXXXENKSFLAAEAMREVERISRLAEDTVSTLQL 268
N++++ +NK +AAEA+ E ER+ +L E++ + LQL
Sbjct: 121 KVLDRYKISELENKVLEVAPEVVAMKLAESDNKRLIAAEAVEEEERMHKLVEESHTMLQL 180
Query: 269 VKEIYEKCSRG-EIVLL 284
EI+++C+ G E+VLL
Sbjct: 181 CLEIHQQCALGQEVVLL 197
>AT1G54240.1 | Symbols: | winged-helix DNA-binding transcription
factor family protein | chr1:20253088-20254494 FORWARD
LENGTH=229
Length = 229
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 88/174 (50%), Gaps = 12/174 (6%)
Query: 121 NAMIFEALSSI-KDADGSDMNAIVSFIEQKHTNTLHQNFRKALGARLRKLVHQGKLEKVQ 179
+ +IF+AL ++ ++ +G D++AI +FI+++ N L ++FR+ L +LR LV +G++ KV
Sbjct: 57 DELIFQALETVYENHNGLDVDAIFTFIKER--NELQEDFRERLENQLRYLVSEGQVYKVG 114
Query: 180 NCYKIKKDTPSGPRLPSPKSPVPEQKD------LRPQQSPTS--SFVTCNEIIKXXXXXX 231
N YKI + P + S E D + Q +P++ SF +
Sbjct: 115 NLYKIPRGVFDTPVVSVGDSNQRETMDPEDSTGTKAQDTPSTCASFAPPTTEVDPRIIAL 174
Query: 232 XXXXXXXENKSFLAAEAMREVERISRLAE-DTVSTLQLVKEIYEKCSRGEIVLL 284
E+ A EA ++ ++L + ++ TLQL EI +C+ GE + L
Sbjct: 175 AKEVAEAEHLELEAKEAYELADKHAQLLKLESNITLQLAVEILNRCANGEKIFL 228
>AT2G30620.2 | Symbols: | winged-helix DNA-binding transcription
factor family protein | chr2:13045360-13046267 FORWARD
LENGTH=202
Length = 202
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 55/103 (53%), Gaps = 9/103 (8%)
Query: 118 PRYNAMIFEALSSIKDADGSDMNAIVSFIEQKHTNTLHQNFRKALGARLRKLVHQGKLEK 177
P Y MI +A+ ++K+ GS AI FIE+KH +L FRK L L++LV KL K
Sbjct: 63 PTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKH-KSLPPTFRKLLLVNLKRLVASEKLVK 121
Query: 178 VQNCYKIKKDTPSGPRLPSPKSPVPEQKD----LRPQQSPTSS 216
V+ +KI PS +PK P +K +P+ S TS+
Sbjct: 122 VKASFKI----PSARSAATPKPAAPVKKKATVVAKPKASRTST 160
>AT1G17460.1 | Symbols: TRFL3 | TRF-like 3 | chr1:5999519-6002546
FORWARD LENGTH=604
Length = 604
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 8 WTAEEEDALHRGVQKYGAGKWKNILKDPEFAPSLTSRSNIDLKDKWRNL 56
WT E + L GV KYG GKW I K F+P T R+ +DLKDKWRNL
Sbjct: 499 WTISEVEKLVEGVSKYGVGKWTEI-KKLSFSP-YTHRTTVDLKDKWRNL 545
>AT2G18050.1 | Symbols: HIS1-3 | histone H1-3 | chr2:7846095-7846670
FORWARD LENGTH=167
Length = 167
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 102 TPSQNSAEKDHEAKVPPRYNAMIFEALSSIKDADGSDMNAIVSFIEQKHTNTLHQNFRKA 161
TP+ K PP Y MI EAL +K+ +GS AI IE+KH + L ++FRK
Sbjct: 10 TPAAKKPRKPKTTTHPP-YFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKT 68
Query: 162 LGARLRKLVHQGKLEKVQNCYKI 184
L +L+ V +GKL K++ YK+
Sbjct: 69 LSLQLKNSVAKGKLVKIRASYKL 91
>AT1G17460.2 | Symbols: TRFL3 | TRF-like 3 | chr1:5999519-6002546
FORWARD LENGTH=624
Length = 624
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 8 WTAEEEDALHRGVQKYGAGKWKNILKDPEFAPSLTSRSNIDLKDKWRNL 56
WT E + L GV KYG GKW I K F+P T R+ +DLKDKWRNL
Sbjct: 519 WTISEVEKLVEGVSKYGVGKWTEI-KKLSFSP-YTHRTTVDLKDKWRNL 565
>AT2G30620.1 | Symbols: | winged-helix DNA-binding transcription
factor family protein | chr2:13045360-13046267 FORWARD
LENGTH=273
Length = 273
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 118 PRYNAMIFEALSSIKDADGSDMNAIVSFIEQKHTNTLHQNFRKALGARLRKLVHQGKLEK 177
P Y MI +A+ ++K+ GS AI FIE+KH +L FRK L L++LV KL K
Sbjct: 63 PTYEEMIKDAIVTLKERTGSSQYAIQKFIEEKH-KSLPPTFRKLLLVNLKRLVASEKLVK 121
Query: 178 VQNCYKIKKDTPSGPRLPSPKSPVPEQK 205
V+ +KI PS +PK P +K
Sbjct: 122 VKASFKI----PSARSAATPKPAAPVKK 145
>AT1G72650.2 | Symbols: TRFL6 | TRF-like 6 | chr1:27350253-27353483
FORWARD LENGTH=630
Length = 630
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 8 WTAEEEDALHRGVQKYGAGKWKNILKDPEFAPSLTSRSNIDLKDKWRNL 56
WT E L GV KYGAGKW I K S + R+++DLKDKWRNL
Sbjct: 543 WTLSEIAKLVEGVSKYGAGKWSEIKK--HLFSSHSYRTSVDLKDKWRNL 589
>AT1G72650.1 | Symbols: TRFL6 | TRF-like 6 | chr1:27350253-27353483
FORWARD LENGTH=624
Length = 624
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 8 WTAEEEDALHRGVQKYGAGKWKNILKDPEFAPSLTSRSNIDLKDKWRNL 56
WT E L GV KYGAGKW I K S + R+++DLKDKWRNL
Sbjct: 537 WTLSEIAKLVEGVSKYGAGKWSEIKK--HLFSSHSYRTSVDLKDKWRNL 583
>AT2G18050.2 | Symbols: HIS1-3 | histone H1-3 | chr2:7846254-7846670
FORWARD LENGTH=138
Length = 138
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 123 MIFEALSSIKDADGSDMNAIVSFIEQKHTNTLHQNFRKALGARLRKLVHQGKLEKVQNCY 182
MI EAL +K+ +GS AI IE+KH + L ++FRK L +L+ V +GKL K++ Y
Sbjct: 1 MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASY 60
Query: 183 KI 184
K+
Sbjct: 61 KL 62
>AT1G54230.1 | Symbols: | Winged helix-turn-helix transcription
repressor DNA-binding | chr1:20250954-20252151 FORWARD
LENGTH=232
Length = 232
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Query: 123 MIFEALSSIKD---ADGSDMNAIVSFIEQKHTNTLHQNFRKALGARLRKLVHQGKLEKVQ 179
M+FEALS+I D G D++ I F ++ + N R+ L + KLV + K+EKV
Sbjct: 19 MVFEALSTIDDEHDGTGRDVDGIFKFNNDRYV--IPDNSRERLRGEVEKLVAERKIEKVG 76
Query: 180 NCYKIKKDTPSGPRLPSPKSPVPEQKDLRPQQSPTSSFVTCNEIIKXXXXXXXXXXXXXE 239
N Y + +P + P + PQ+ P + V E
Sbjct: 77 NRYMMM--------MPQ-RVPATREDSTTPQRDPQAEAVA-------------KLVAETE 114
Query: 240 NKSFLAAEAMREVERISRLAEDTVSTLQLVKEIYEKCSRGEIVLLA 285
+ F A EA +R S + L+L EI +C+ G+++ L
Sbjct: 115 HLEFQAKEAQELADRYSLMLNSECIILELAVEILNRCANGQMIFLC 160