Miyakogusa Predicted Gene

Lj3g3v0323310.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0323310.1 Non Chatacterized Hit- tr|K4BMX8|K4BMX8_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,39.1,2e-18,seg,NULL,CUFF.40509.1
         (139 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G13898.1 | Symbols:  | unknown protein; LOCATED IN: endomembr...    69   7e-13
AT2G30370.1 | Symbols: CHAL, EPFL6 | allergen-related | chr2:129...    51   2e-07
AT4G37810.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    51   3e-07
AT2G30370.2 | Symbols: CHAL, EPFL6 | allergen-related | chr2:129...    50   4e-07

>AT3G13898.1 | Symbols:  | unknown protein; LOCATED IN: endomembrane
           system; BEST Arabidopsis thaliana protein match is:
           unknown protein (TAIR:AT5G10310.1). |
           chr3:4584011-4584334 FORWARD LENGTH=107
          Length = 107

 Score = 69.3 bits (168), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 35/69 (50%), Positives = 39/69 (56%), Gaps = 6/69 (8%)

Query: 66  TERMKEEAYYDRRIGSSPPSCEHKCYGCTPCEAIQVPSTXXXXXXXXXXXLGIQYANYEP 125
            E  +E     RRIGS PPSCE KCYGC PCEAIQ P+            L   YANY+P
Sbjct: 44  NENKEEIVKRRRRIGSKPPSCEKKCYGCEPCEAIQFPTI------SSIPHLSPHYANYQP 97

Query: 126 ESWKCKCGP 134
           E W+C C P
Sbjct: 98  EGWRCHCPP 106


>AT2G30370.1 | Symbols: CHAL, EPFL6 | allergen-related |
           chr2:12940577-12942167 REVERSE LENGTH=230
          Length = 230

 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 12/79 (15%)

Query: 63  EKMTERMKEEAYYD--RRIGSSPPSCEHKCYGCTPCEAIQVPSTXXXXXXXXXXXLGIQY 120
            K+ +R KE       R +GSSPP C  KC  CTPC+ + VP                  
Sbjct: 162 RKIGDRSKEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVT---------- 211

Query: 121 ANYEPESWKCKCGPSFYSP 139
           A Y PE+W+CKCG   Y P
Sbjct: 212 AEYYPEAWRCKCGNKLYMP 230


>AT4G37810.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: endomembrane
           system; BEST Arabidopsis thaliana protein match is:
           unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits
           to 149 proteins in 15 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr4:17780970-17781544 FORWARD LENGTH=128
          Length = 128

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 30/76 (39%), Positives = 34/76 (44%), Gaps = 15/76 (19%)

Query: 79  IGSSPPSCEH-KCYGCTPCEAIQVPST--------------XXXXXXXXXXXLGIQYANY 123
           IGS PP CE  +C  C  CEAIQVP+                           G    NY
Sbjct: 53  IGSRPPRCERVRCRSCGHCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNY 112

Query: 124 EPESWKCKCGPSFYSP 139
           +P SWKCKCG S Y+P
Sbjct: 113 KPMSWKCKCGNSIYNP 128


>AT2G30370.2 | Symbols: CHAL, EPFL6 | allergen-related |
           chr2:12940577-12942167 REVERSE LENGTH=156
          Length = 156

 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 37/79 (46%), Gaps = 12/79 (15%)

Query: 63  EKMTERMKEEAYYD--RRIGSSPPSCEHKCYGCTPCEAIQVPSTXXXXXXXXXXXLGIQY 120
            K+ +R KE       R +GSSPP C  KC  CTPC+ + VP                  
Sbjct: 88  RKIGDRSKEAELRRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVT---------- 137

Query: 121 ANYEPESWKCKCGPSFYSP 139
           A Y PE+W+CKCG   Y P
Sbjct: 138 AEYYPEAWRCKCGNKLYMP 156