Miyakogusa Predicted Gene
- Lj3g3v0323180.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0323180.2 Non Chatacterized Hit- tr|I1LAS6|I1LAS6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,33.2,2e-18,A Receptor
for Ubiquitination Targets,F-box domain, cyclin-like; seg,NULL; no
description,NULL; FBOX,CUFF.40499.2
(442 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G60400.1 | Symbols: | F-box/RNI-like superfamily protein | c... 80 3e-15
AT5G53840.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 76 5e-14
AT1G16930.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 76 6e-14
AT1G78760.1 | Symbols: | F-box/RNI-like superfamily protein | c... 71 1e-12
AT1G69630.1 | Symbols: | F-box/RNI-like superfamily protein | c... 71 1e-12
AT4G00315.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 71 1e-12
AT1G51370.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 70 2e-12
AT1G55660.2 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 70 3e-12
AT1G55660.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 70 3e-12
AT1G51370.3 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 69 5e-12
AT1G51370.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 69 5e-12
AT1G78840.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 67 2e-11
AT5G22720.1 | Symbols: | F-box/RNI-like superfamily protein | c... 66 5e-11
AT5G22720.2 | Symbols: | F-box/RNI-like superfamily protein | c... 66 5e-11
AT5G53635.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 65 9e-11
AT5G56420.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 64 2e-10
AT5G56420.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 64 2e-10
AT4G10400.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 64 3e-10
AT4G10400.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 64 3e-10
AT2G42730.1 | Symbols: | F-box family protein | chr2:17787454-1... 63 3e-10
AT3G58860.1 | Symbols: | F-box/RNI-like superfamily protein | c... 63 3e-10
AT2G42730.2 | Symbols: | F-box family protein | chr2:17789606-1... 62 6e-10
AT1G66300.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 62 7e-10
AT1G13570.1 | Symbols: | F-box/RNI-like superfamily protein | c... 62 7e-10
AT4G09920.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 62 1e-09
AT1G80470.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 62 1e-09
AT1G32375.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 61 1e-09
AT1G26890.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 61 1e-09
AT4G15060.1 | Symbols: | CONTAINS InterPro DOMAIN/s: FBD (Inter... 61 2e-09
AT3G26922.1 | Symbols: | F-box/RNI-like superfamily protein | c... 61 2e-09
AT5G56370.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 60 3e-09
AT5G56370.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 60 3e-09
AT1G13780.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 60 3e-09
AT5G18780.2 | Symbols: | F-box/RNI-like superfamily protein | c... 60 4e-09
AT5G18780.1 | Symbols: | F-box/RNI-like superfamily protein | c... 60 4e-09
AT5G22610.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 59 5e-09
AT2G26860.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 59 5e-09
AT4G00160.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 59 6e-09
AT2G26860.2 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 59 6e-09
AT4G03220.1 | Symbols: | Protein with RNI-like/FBD-like domains... 59 6e-09
AT1G58310.1 | Symbols: | F-box/RNI-like superfamily protein | c... 59 6e-09
AT3G59000.1 | Symbols: | F-box/RNI-like superfamily protein | c... 59 7e-09
AT5G22670.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 59 8e-09
AT1G66320.1 | Symbols: | F-box/RNI-like superfamily protein | c... 59 1e-08
AT5G38570.1 | Symbols: | F-box/RNI-like superfamily protein | c... 58 1e-08
AT5G44950.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 57 2e-08
AT5G53640.1 | Symbols: | CONTAINS InterPro DOMAIN/s: F-box doma... 57 2e-08
AT5G02920.1 | Symbols: | F-box/RNI-like superfamily protein | c... 57 2e-08
AT5G27750.1 | Symbols: | F-box/FBD-like domains containing prot... 57 3e-08
AT5G54820.1 | Symbols: | F-box/RNI-like superfamily protein | c... 57 3e-08
AT1G66310.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 57 3e-08
AT2G04230.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 57 3e-08
AT2G26030.3 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 56 4e-08
AT2G26030.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 56 4e-08
AT3G58880.1 | Symbols: | F-box/RNI-like superfamily protein | c... 56 4e-08
AT3G50710.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 56 4e-08
AT5G02930.1 | Symbols: | F-box/RNI-like superfamily protein | c... 56 5e-08
AT5G50270.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 56 6e-08
AT5G56440.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 55 7e-08
AT4G14103.2 | Symbols: | F-box/RNI-like superfamily protein | c... 55 1e-07
AT4G13985.1 | Symbols: FBD1 | FBD-associated F-box protein | chr... 55 1e-07
AT3G51530.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 55 1e-07
AT5G60610.1 | Symbols: | F-box/RNI-like superfamily protein | c... 55 1e-07
AT5G56820.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 55 1e-07
AT5G02910.2 | Symbols: | F-box/RNI-like superfamily protein | c... 55 1e-07
AT5G38565.1 | Symbols: | F-box/FBD-like domains containing prot... 55 1e-07
AT3G58980.1 | Symbols: | F-box family protein | chr3:21794445-2... 55 1e-07
AT5G02910.1 | Symbols: | F-box/RNI-like superfamily protein | c... 55 1e-07
AT4G14103.1 | Symbols: | F-box/RNI-like superfamily protein | c... 55 1e-07
AT3G59200.1 | Symbols: | F-box/RNI-like superfamily protein | c... 55 1e-07
AT3G49030.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 54 2e-07
AT3G49030.2 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 54 2e-07
AT3G52670.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 54 2e-07
AT3G58960.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 2e-07
AT3G18150.1 | Symbols: | RNI-like superfamily protein | chr3:62... 54 2e-07
AT5G41840.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 2e-07
AT3G59250.1 | Symbols: | F-box/RNI-like superfamily protein | c... 54 2e-07
AT5G25850.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 2e-07
AT1G22000.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 54 2e-07
AT5G44980.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 2e-07
AT3G59240.1 | Symbols: | RNI-like superfamily protein | chr3:21... 54 3e-07
AT5G56380.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 54 3e-07
AT3G49040.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 4e-07
AT1G66290.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 4e-07
AT3G62440.1 | Symbols: | F-box/RNI-like superfamily protein | c... 53 4e-07
AT3G59000.2 | Symbols: | F-box/RNI-like superfamily protein | c... 53 5e-07
AT1G78750.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 6e-07
AT3G59160.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 6e-07
AT1G32020.1 | Symbols: | F-box family protein | chr1:11512552-1... 52 7e-07
AT3G58900.3 | Symbols: | F-box/RNI-like superfamily protein | c... 52 8e-07
AT3G58900.2 | Symbols: | F-box/RNI-like superfamily protein | c... 52 9e-07
AT3G58900.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 9e-07
AT3G58900.4 | Symbols: | F-box/RNI-like superfamily protein | c... 52 9e-07
AT1G49610.1 | Symbols: | F-box family protein | chr1:18361679-1... 52 9e-07
AT5G44940.1 | Symbols: | F-box/RNI-like superfamily protein | c... 52 1e-06
AT4G26340.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 52 1e-06
AT5G38390.1 | Symbols: | F-box/RNI-like superfamily protein | c... 51 1e-06
AT5G02700.1 | Symbols: | F-box/RNI-like superfamily protein | c... 51 1e-06
AT3G59230.1 | Symbols: | RNI-like superfamily protein | chr3:21... 51 1e-06
AT3G28410.1 | Symbols: | F-box/RNI-like superfamily protein | c... 51 1e-06
AT1G67390.1 | Symbols: | F-box family protein | chr1:25244690-2... 51 1e-06
AT5G18770.1 | Symbols: | F-box/FBD-like domains containing prot... 51 1e-06
AT4G26350.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 51 1e-06
AT5G44960.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 51 2e-06
AT4G14096.1 | Symbols: | F-box/RNI-like superfamily protein | c... 51 2e-06
AT5G56810.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 51 2e-06
AT2G39415.1 | Symbols: | F-box family protein | chr2:16458607-1... 51 2e-06
AT3G59170.1 | Symbols: | F-box/RNI-like superfamily protein | c... 51 2e-06
AT1G56400.1 | Symbols: | F-box family protein | chr1:21111805-2... 51 2e-06
AT3G44060.1 | Symbols: | F-box/RNI-like superfamily protein | c... 51 2e-06
AT3G59190.1 | Symbols: | F-box/RNI-like superfamily protein | c... 51 2e-06
AT1G60410.1 | Symbols: | F-box family protein | chr1:22259129-2... 50 2e-06
AT4G22280.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 2e-06
AT4G22280.2 | Symbols: | F-box/RNI-like superfamily protein | c... 50 2e-06
AT4G13960.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 3e-06
AT3G52680.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 3e-06
AT3G52680.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 50 3e-06
AT5G44490.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 50 3e-06
AT3G59150.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 4e-06
AT3G58920.1 | Symbols: | F-box/RNI-like superfamily protein | c... 50 4e-06
AT3G44810.1 | Symbols: | F-box family protein | chr3:16358496-1... 49 5e-06
AT5G38590.2 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 49 5e-06
AT5G22730.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 49 5e-06
AT5G38590.1 | Symbols: | F-box/RNI-like/FBD-like domains-contai... 49 5e-06
AT5G22660.2 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 49 6e-06
AT5G22660.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich... 49 7e-06
AT1G55030.1 | Symbols: | RNI-like superfamily protein | chr1:20... 49 7e-06
AT5G56560.1 | Symbols: | FBD, F-box and Leucine Rich Repeat dom... 49 8e-06
>AT1G60400.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:22254405-22255798 FORWARD LENGTH=403
Length = 403
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 88/180 (48%), Gaps = 10/180 (5%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRFV 115
DR LPE ++ ILS + TKD++RT VLSK WR LW+ VP L + FP + F+ F+
Sbjct: 14 DRLSALPEHLLCRILSELSTKDSVRTSVLSKHWRNLWLHVPVLELETSDFPDNLVFREFI 73
Query: 116 -LWVLSHRDSSCVKVLIYYRFGVDYATD-QYLLDKVIEYVALHGVEEIRINLKAKTSGSP 173
+V ++ I+Y V + D +++D V++ V ++ +
Sbjct: 74 DRFVGFDKEIDLKSFDIFYDVNVLWYDDFLWMIDDVVK----RRVCDLMVTNNPYVVNEK 129
Query: 174 PVKLPLSLFNCKSLNKLELKGCHPTNVSSPHGCRSVEMPHSEQLSMHPATADNANSLASL 233
VK+P+SL++C +L L L N+ S C +P + L +H D + L +L
Sbjct: 130 LVKMPISLYSCATLVNLNLSFVAMNNLPSESVC----LPRVKTLYLHGVKLDGDSILGTL 185
>AT5G53840.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:21859148-21860672
REVERSE LENGTH=444
Length = 444
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 47 ENSEAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFP 106
+ S ++R LP+ ++ ILS + TKDA+RT +LS RWR LW VP L+F+S+
Sbjct: 9 KGSSQGSEEERLSQLPDHLICVILSHLSTKDAVRTSILSTRWRNLWQLVPVLDFDSRELR 68
Query: 107 RLVEFKRFV-LWVLSHRDSSC--VKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRI 163
EF F + H+DS ++V IY G Y L I+ V H ++ I I
Sbjct: 69 SFSEFVSFAGSFFYLHKDSYIQKLRVCIYDLAG------NYYLTSWIDLVTRHRIQHIDI 122
Query: 164 NLKAKTSGSPPVKLPLSLFNCKSLNKLELKGCHPTNV 200
++ SG + PLSL+ C +L L+L NV
Sbjct: 123 SV-FTCSGFGVI--PLSLYTCDTLVHLKLSRVTMVNV 156
>AT1G16930.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:5789987-5791534
FORWARD LENGTH=449
Length = 449
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 83/159 (52%), Gaps = 10/159 (6%)
Query: 50 EAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLV 109
E + DR NLP+S++ ILS + TK+++ T VLSKRWR LW+ VP L+ +S +FP
Sbjct: 9 EKQRNSDRISNLPDSLLCQILSDLSTKESVCTSVLSKRWRNLWLHVPVLDLDSNNFPDDD 68
Query: 110 EFKRFVLWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYV-ALHGVEEIRINLKAK 168
F FV L + ++ RF + Y +++ + ++ A+ N+ +
Sbjct: 69 VFVSFVNRFLGSENEQHLE-----RFKLIYEVNEHDASRFKSWINAVIKRRVCHFNVHNE 123
Query: 169 TSGSPP-VKLPLSLFNCKSLNKLELKGC---HPTNVSSP 203
VK+PLSL++C+ L L+L HP +VS P
Sbjct: 124 VDDDDELVKMPLSLYSCERLVNLQLYRVALDHPESVSLP 162
>AT1G78760.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:29615174-29616738 REVERSE LENGTH=452
Length = 452
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 76/147 (51%), Gaps = 4/147 (2%)
Query: 47 ENSEAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFP 106
E +DR NLPES++ I+ + TKD +++ VLSKRWR LW VP LN F
Sbjct: 7 EKRARRSEEDRLSNLPESLICQIMLNIPTKDVVKSSVLSKRWRNLWRYVPGLNVEYNQFL 66
Query: 107 RLVEFKRFVLWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRI-NL 165
F FV L+ SC + +R D ++ + V ++ + +++++ ++
Sbjct: 67 DYNAFVSFVDRFLALDRESCFQ---SFRLRYDCDEEERTISNVKRWINIVVDQKLKVLDV 123
Query: 166 KAKTSGSPPVKLPLSLFNCKSLNKLEL 192
T G+ V++P S++ C+SL L+L
Sbjct: 124 LDYTWGNEEVQIPPSVYTCESLVSLKL 150
>AT1G69630.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:26191640-26193174 REVERSE LENGTH=451
Length = 451
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 6/159 (3%)
Query: 49 SEAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRL 108
++ ++ D LP+ ++ +L + TKD ++T VLS+RWR LW VP L+ ++ F
Sbjct: 11 AKGSDEVDWISKLPDCLLCEVLLNLPTKDVVKTSVLSRRWRNLWKHVPGLDLDNTDFQEF 70
Query: 109 VEFKRFVLWVLSHRDSSCV-KVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKA 167
F FV L S + K ++ Y +Y D +L+ + I + V+ I++
Sbjct: 71 NTFLSFVDSFLDFNSESFLQKFILKYDCDDEYDPDIFLIGRWINTIVTRKVQ--HIDVLD 128
Query: 168 KTSGSPPVKLPLSLFNCKSLNKLELKG---CHPTNVSSP 203
+ GS V+LP S++ C+SL L+L G P VS P
Sbjct: 129 DSYGSWEVQLPSSIYTCESLVSLKLCGLTLASPEFVSLP 167
>AT4G00315.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:137404-138888 FORWARD
LENGTH=441
Length = 441
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 91/184 (49%), Gaps = 15/184 (8%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCL--NFNSKSFPRLVEFKR 113
D+ LP+ +++ +LS + TKDA+RT +LS RW+ LWM +P L +F S R
Sbjct: 2 DKTSQLPDELLVKVLSFLPTKDAVRTSLLSMRWKSLWMWLPKLEYDFRHYSVSEGQGLAR 61
Query: 114 FV-LWVLSHRDSSCVKVLIYYRFGVDYAT---DQYLLDKVIEYVALHGVEEIRINLKAKT 169
F+ L +L H+ + + + R+G + D YL +A+H ++LK T
Sbjct: 62 FITLSLLGHKAPAIESLSLKLRYGAIGSIKPEDIYLWVS----LAVHDSNVRELSLKLCT 117
Query: 170 SGSPPVKLPLSLFNCKSLNKLELKGCHPTNVSSPHGCRSVEMPHSEQLSMHPATADNANS 229
P KLP SL+ CKS+ L+LK +V R V +P + L + T + +S
Sbjct: 118 FAERPTKLPKSLYKCKSIVILKLKDEILVDVP-----RKVCLPSLKTLFLGRVTYSDEDS 172
Query: 230 LASL 233
L L
Sbjct: 173 LHRL 176
>AT1G51370.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:19045615-19046748
FORWARD LENGTH=346
Length = 346
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 50 EAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLV 109
+ + +DR LPE ++ IL + TKD++RT LS +WRYLW SVP L+ + +
Sbjct: 13 KVSHEEDRISQLPEPLISEILFHLSTKDSVRTSALSTKWRYLWQSVPGLDLDPYASSNTN 72
Query: 110 EFKRFV-LWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAK 168
FV + SHRDS K+ R + Y D+Y L I+ ++ + ++
Sbjct: 73 TIVSFVESFFDSHRDSWIRKL----RLDLGYHHDKYDLMSWIDAATTRRIQHLDVHCFHD 128
Query: 169 TSGSPPVKLPLSLFNCKSLNKLELKGCHPTN 199
K+PLS++ C +L L L+ TN
Sbjct: 129 N------KIPLSIYTCTTLVHLRLRWAVLTN 153
>AT1G55660.2 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr1:20800694-20801788
FORWARD LENGTH=364
Length = 364
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 40 ASTPQNIENSEAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCL- 98
ST +N+E D+ LP+ +++ +LS + TKDA+ T +LS RW+ LWM +P L
Sbjct: 39 TSTKRNVEI--VKNLMDKISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWLPKLE 96
Query: 99 -NFNSKSFPRLVEFKRFVLWVLS-HRDSSCVKVLIYYRFGVDYAT---DQYLLDKVIEYV 153
NF S RF+ L H+ + + + +R+G + D YL +
Sbjct: 97 YNFRHYSVSEGQGLARFITSSLRVHKAPAIESLSLKFRYGAIGSIKPKDIYLWVS----L 152
Query: 154 ALHGVEEIRINLKAKTSGSPPVKLPLSLFNCKSLNKLELKGCHPTNVSSPHGCRSVEMPH 213
A+H ++LK P KLP SL CKS+ L+LK +V R V +P
Sbjct: 153 AVHVSNVRELSLKLFNFAELPTKLPKSLCKCKSIVILKLKDEILVDVP-----RKVCLPS 207
Query: 214 SEQLSMHPATADNANSLASL 233
+ L + T +ANSL L
Sbjct: 208 LKTLFLGRVTYSDANSLHRL 227
>AT1G55660.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr1:20800694-20802340
FORWARD LENGTH=492
Length = 492
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 40 ASTPQNIENSEAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCL- 98
ST +N+E D+ LP+ +++ +LS + TKDA+ T +LS RW+ LWM +P L
Sbjct: 39 TSTKRNVEI--VKNLMDKISQLPDELLVKVLSFLSTKDAVSTSILSMRWKSLWMWLPKLE 96
Query: 99 -NFNSKSFPRLVEFKRFVLWVLS-HRDSSCVKVLIYYRFGVDYAT---DQYLLDKVIEYV 153
NF S RF+ L H+ + + + +R+G + D YL +
Sbjct: 97 YNFRHYSVSEGQGLARFITSSLRVHKAPAIESLSLKFRYGAIGSIKPKDIYLWVS----L 152
Query: 154 ALHGVEEIRINLKAKTSGSPPVKLPLSLFNCKSLNKLELKGCHPTNVSSPHGCRSVEMPH 213
A+H ++LK P KLP SL CKS+ L+LK +V R V +P
Sbjct: 153 AVHVSNVRELSLKLFNFAELPTKLPKSLCKCKSIVILKLKDEILVDVP-----RKVCLPS 207
Query: 214 SEQLSMHPATADNANSLASL 233
+ L + T +ANSL L
Sbjct: 208 LKTLFLGRVTYSDANSLHRL 227
>AT1G51370.3 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:19045615-19047141
FORWARD LENGTH=413
Length = 413
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 50 EAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLV 109
+ + +DR LPE ++ IL + TKD++RT LS +WRYLW SVP L+ + +
Sbjct: 13 KVSHEEDRISQLPEPLISEILFHLSTKDSVRTSALSTKWRYLWQSVPGLDLDPYASSNTN 72
Query: 110 EFKRFV-LWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAK 168
FV + SHRDS K+ R + Y D+Y L I+ ++ + ++
Sbjct: 73 TIVSFVESFFDSHRDSWIRKL----RLDLGYHHDKYDLMSWIDAATTRRIQHLDVHCFHD 128
Query: 169 TSGSPPVKLPLSLFNCKSLNKLELKGCHPTN 199
K+PLS++ C +L L L+ TN
Sbjct: 129 N------KIPLSIYTCTTLVHLRLRWAVLTN 153
>AT1G51370.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:19045615-19047141
FORWARD LENGTH=435
Length = 435
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 50 EAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLV 109
+ + +DR LPE ++ IL + TKD++RT LS +WRYLW SVP L+ + +
Sbjct: 13 KVSHEEDRISQLPEPLISEILFHLSTKDSVRTSALSTKWRYLWQSVPGLDLDPYASSNTN 72
Query: 110 EFKRFV-LWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAK 168
FV + SHRDS K+ R + Y D+Y L I+ ++ + ++
Sbjct: 73 TIVSFVESFFDSHRDSWIRKL----RLDLGYHHDKYDLMSWIDAATTRRIQHLDVHCFHD 128
Query: 169 TSGSPPVKLPLSLFNCKSLNKLELKGCHPTN 199
K+PLS++ C +L L L+ TN
Sbjct: 129 N------KIPLSIYTCTTLVHLRLRWAVLTN 153
>AT1G78840.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:29639290-29640817
REVERSE LENGTH=439
Length = 439
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 109/257 (42%), Gaps = 27/257 (10%)
Query: 61 LPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRFVLWVLS 120
LP+ V+ IL + TKD+++T +LS RWRY+W VP L+ N +F R K FV L
Sbjct: 11 LPDHVLHEILLKLATKDSVKTSILSTRWRYIWQRVPGLDLNQTNF-RYKGLKGFVNRFLD 69
Query: 121 HRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAKTSGSPPVKLPLS 180
S + L G Y T+ L +K ++ V GV+ + + P+KLP S
Sbjct: 70 LDKKSLIYQLKLEFDGRKYETEGSLFNKWVDSVVTRGVQHL-------VNNYCPIKLPGS 122
Query: 181 LFNCKSLNKLELKGCHPTNVSSPHGCRSVEMPHSEQLSMHPATADNANSLASLPEXXXXX 240
+ C++L L+L + SV +P E + + + +L L
Sbjct: 123 ISMCETLVHLKLVEVGIDSFD------SVSLPRLETMHLLSVWFSSEAALERLISSSPVL 176
Query: 241 XXXXXXXXXXXXCYTGNEVLDPFVNCVNLKDLHL----SEMSFKSQLIPRDFVISAPRLS 296
EV+ V L L + ++ + L VI APRL
Sbjct: 177 QVLYIEKVWNV------EVIR--VRSQTLYSLRMRIWKRDLDWNKDLTKIGLVIDAPRLK 228
Query: 297 NLTLMCNRFKCKLVVNA 313
+L L +RFK LV+N+
Sbjct: 229 SLNLQIHRFK-DLVLNS 244
>AT5G22720.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:7547797-7551174 REVERSE LENGTH=642
Length = 642
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 33 MKKSKLQASTPQNIENSEAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLW 92
M+++K++ + + S A+ +D LP+S++ IL ++TK A+ T VLSKRWR LW
Sbjct: 1 MEETKVKRTCLERTVCSSKAK-EDLISQLPDSLITQILFYLQTKKAVTTSVLSKRWRSLW 59
Query: 93 MSVPCLNFNSKSFPRLVEFKRFVLWVL--SHRDSSCV-KVLIYYRFGVDYATDQYLLDKV 149
+S P L S F F FV L S C+ K+ + R G DQ + +
Sbjct: 60 LSTPGLVLISNDFTDYNAFVSFVDKFLGFSREQKLCLHKLKLSIRKG---ENDQDCVTRW 116
Query: 150 IEYVALHGVEEIRINLKAKTSGSPPVKLPLSLFNCKSLNKLELKGCHPTNVSSPHGC--- 206
I++VA ++ + + + V +PLSL++C+SL L L H C
Sbjct: 117 IDFVATPKLKHLDVEIGPTRCECFEV-IPLSLYSCESLLYLRLN----------HVCLGK 165
Query: 207 -RSVEMPHSEQLSMHPATADNANSLASL 233
SV +P + +S+ N L SL
Sbjct: 166 FESVSLPCLKTMSLEQNIYANEADLESL 193
>AT5G22720.2 | Symbols: | F-box/RNI-like superfamily protein |
chr5:7547797-7551174 REVERSE LENGTH=675
Length = 675
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 98/208 (47%), Gaps = 22/208 (10%)
Query: 33 MKKSKLQASTPQNIENSEAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLW 92
M+++K++ + + S A+ +D LP+S++ IL ++TK A+ T VLSKRWR LW
Sbjct: 1 MEETKVKRTCLERTVCSSKAK-EDLISQLPDSLITQILFYLQTKKAVTTSVLSKRWRSLW 59
Query: 93 MSVPCLNFNSKSFPRLVEFKRFVLWVL--SHRDSSCV-KVLIYYRFGVDYATDQYLLDKV 149
+S P L S F F FV L S C+ K+ + R G DQ + +
Sbjct: 60 LSTPGLVLISNDFTDYNAFVSFVDKFLGFSREQKLCLHKLKLSIRKG---ENDQDCVTRW 116
Query: 150 IEYVALHGVEEIRINLKAKTSGSPPVKLPLSLFNCKSLNKLELKGCHPTNVSSPHGC--- 206
I++VA ++ + + + V +PLSL++C+SL L L H C
Sbjct: 117 IDFVATPKLKHLDVEIGPTRCECFEV-IPLSLYSCESLLYLRLN----------HVCLGK 165
Query: 207 -RSVEMPHSEQLSMHPATADNANSLASL 233
SV +P + +S+ N L SL
Sbjct: 166 FESVSLPCLKTMSLEQNIYANEADLESL 193
>AT5G53635.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:21785999-21787444
REVERSE LENGTH=426
Length = 426
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 65/135 (48%), Gaps = 6/135 (4%)
Query: 60 NLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRFVLWVL 119
LP+ ++ HILS + KD + T VLS RWR LW+ +PCL NS FP F F
Sbjct: 4 QLPDPLICHILSHLPIKDLVTTRVLSTRWRSLWLWLPCLELNSLYFPDFNAFVSFGDKFF 63
Query: 120 SHRDSSCVKVLIYYRFGVDYATDQ-YLLDKVIEYVALHGVEEIRIN-LKAKTSGSPPVKL 177
SC+ Y +G D D L I+ ++ + + L AK ++
Sbjct: 64 DSNRVSCINKFKLYIYGYDVGVDDPSYLTSWIDAAVKCKIQHLHVQCLPAKYI----YEM 119
Query: 178 PLSLFNCKSLNKLEL 192
PLSL+ C++L L+L
Sbjct: 120 PLSLYICETLVYLKL 134
>AT5G56420.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22850863-22852334
REVERSE LENGTH=422
Length = 422
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 13/145 (8%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSK----SFPRLVE 110
+DR LP+ +L ILS + TKD + T +LSKRWR+LW VP LN++ + + PR
Sbjct: 5 RDRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNYDLRLHDNTCPR--- 61
Query: 111 FKRFVLWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAK-T 169
F +FV R K + + + +K + GV+ L
Sbjct: 62 FSQFV-----DRSLLLHKAPTLESLNIKIGSICFTAEKDVGVWVRIGVDRFVRELSVSYC 116
Query: 170 SGSPPVKLPLSLFNCKSLNKLELKG 194
SG P++LP LF C +L L+L+
Sbjct: 117 SGEEPIRLPKCLFTCSTLAVLKLEN 141
>AT5G56420.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22850863-22852334
REVERSE LENGTH=422
Length = 422
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 69/145 (47%), Gaps = 13/145 (8%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSK----SFPRLVE 110
+DR LP+ +L ILS + TKD + T +LSKRWR+LW VP LN++ + + PR
Sbjct: 5 RDRLSQLPDDFLLQILSWLPTKDVLVTSLLSKRWRFLWTLVPRLNYDLRLHDNTCPR--- 61
Query: 111 FKRFVLWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAK-T 169
F +FV R K + + + +K + GV+ L
Sbjct: 62 FSQFV-----DRSLLLHKAPTLESLNIKIGSICFTAEKDVGVWVRIGVDRFVRELSVSYC 116
Query: 170 SGSPPVKLPLSLFNCKSLNKLELKG 194
SG P++LP LF C +L L+L+
Sbjct: 117 SGEEPIRLPKCLFTCSTLAVLKLEN 141
>AT4G10400.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:6446335-6447715
REVERSE LENGTH=409
Length = 409
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRFV 115
DR LP+ V++ ILS + TK A+ T +LSKRW +LWM + L F SK + EFKR
Sbjct: 2 DRISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRYSE-SEFKRLQ 60
Query: 116 LWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIR-INLKAKTSGSPP 174
++ R+ + + F + + + + + +V + IR + + + G
Sbjct: 61 CFL--DRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIRELKIYSSHYGEKQ 118
Query: 175 VKLPLSLFNCKSLNKLELKG 194
LP SL+ CKSL L+L G
Sbjct: 119 NILPSSLYTCKSLVILKLDG 138
>AT4G10400.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:6446335-6447715
REVERSE LENGTH=409
Length = 409
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRFV 115
DR LP+ V++ ILS + TK A+ T +LSKRW +LWM + L F SK + EFKR
Sbjct: 2 DRISGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRYSE-SEFKRLQ 60
Query: 116 LWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIR-INLKAKTSGSPP 174
++ R+ + + F + + + + + +V + IR + + + G
Sbjct: 61 CFL--DRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIRELKIYSSHYGEKQ 118
Query: 175 VKLPLSLFNCKSLNKLELKG 194
LP SL+ CKSL L+L G
Sbjct: 119 NILPSSLYTCKSLVILKLDG 138
>AT2G42730.1 | Symbols: | F-box family protein |
chr2:17787454-17791218 REVERSE LENGTH=737
Length = 737
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 80/151 (52%), Gaps = 17/151 (11%)
Query: 54 SQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSK-SFPRL---- 108
++D LP+ V+ ILSL+ TK+A+ T VLSKRW+ +++ V L+ + + S P+
Sbjct: 3 AKDVISRLPDEVLGRILSLISTKEAVSTSVLSKRWKNMFVLVSNLDIDDRQSVPKTKQNR 62
Query: 109 VEFKR----FVLWVL-SHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIR- 162
+E R FV +L + R SS K+ + GV TD + I V HGV ++
Sbjct: 63 IEIHRNYMAFVDKLLDTQRGSSIKKLTLKSHVGVRGGTDSSRIQSWICNVLDHGVMDLDV 122
Query: 163 -INLKAKTSGSPPVKLPLSLFNCKSLNKLEL 192
I LK K SPPV P +F K+L KL +
Sbjct: 123 FITLKGK---SPPV--PAMIFKSKTLVKLRV 148
>AT3G58860.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21763742-21765306 REVERSE LENGTH=457
Length = 457
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 14/140 (10%)
Query: 52 AESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEF 111
+E D F LP+ V+ HILS + TK+A T VL+K+WRYL+ VP L+FN F E
Sbjct: 3 SEKMDLFSKLPDEVISHILSSLPTKEAASTSVLAKKWRYLFAFVPSLDFNDSDFLHPQEG 62
Query: 112 KR-----------FVLWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEE 160
KR FV VL+ + +S +K + V D +D+ I V GV
Sbjct: 63 KREKDGILRSFMDFVDRVLALQGASPIK---KFSLNVKTGVDPDRVDRWICNVLQRGVSH 119
Query: 161 IRINLKAKTSGSPPVKLPLS 180
+ + + + S P ++ +S
Sbjct: 120 LALFMDFEEEYSLPYEISVS 139
>AT2G42730.2 | Symbols: | F-box family protein |
chr2:17789606-17791218 REVERSE LENGTH=457
Length = 457
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 80/151 (52%), Gaps = 17/151 (11%)
Query: 54 SQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSK-SFPRL---- 108
++D LP+ V+ ILSL+ TK+A+ T VLSKRW+ +++ V L+ + + S P+
Sbjct: 3 AKDVISRLPDEVLGRILSLISTKEAVSTSVLSKRWKNMFVLVSNLDIDDRQSVPKTKQNR 62
Query: 109 VEFKR----FVLWVL-SHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIR- 162
+E R FV +L + R SS K+ + GV TD + I V HGV ++
Sbjct: 63 IEIHRNYMAFVDKLLDTQRGSSIKKLTLKSHVGVRGGTDSSRIQSWICNVLDHGVMDLDV 122
Query: 163 -INLKAKTSGSPPVKLPLSLFNCKSLNKLEL 192
I LK K SPPV P +F K+L KL +
Sbjct: 123 FITLKGK---SPPV--PAMIFKSKTLVKLRV 148
>AT1G66300.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:24716497-24718050
REVERSE LENGTH=456
Length = 456
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 48 NSEAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPR 107
+ ++ D +LPES++ H+L + TKD I+ CVLS +WRYLW VP L+ + F
Sbjct: 21 DKKSGYEVDWVRDLPESLICHVLLNLSTKDVIKNCVLSTKWRYLWRYVPGLDLDCSDF-- 78
Query: 108 LVEFKRFVLWVLSHRDSSCVKVLIYYRFGV------DYATDQYLLDKVIEYVALHGVEEI 161
E+ FV +V ++ L ++ G D T + + I V V+ +
Sbjct: 79 -TEYNTFVSFVDRFLSTNTESYLNKFKLGFDCDLVGDEETGNAQMARWINDVVKRKVQHL 137
Query: 162 RINLKAKTSGSPPVKLPLSLFNCKSLNKLELKG 194
+ A +++P ++ CKSL L+L G
Sbjct: 138 DLEWGA-------LEIPPIVYVCKSLVSLKLCG 163
>AT1G13570.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:4642528-4643930 REVERSE LENGTH=416
Length = 416
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 77/152 (50%), Gaps = 18/152 (11%)
Query: 52 AESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSK----SFPR 107
ES D +LP+S++ +IL+ + +DAIRT VLS +WRY W ++ L F+ K S R
Sbjct: 2 GESPDFISDLPQSIIENILTRLSIRDAIRTSVLSSKWRYKWSTLTDLVFDEKCVSPSNDR 61
Query: 108 LV---EFKRFVLWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRIN 164
V RF+ VL K ++ + + +D+ + +++ +G++E+ +
Sbjct: 62 CVVETNLVRFITGVLLLHQGPIHK----FQLSTSFKQCRPDIDQWLLFLSRNGIKELVLK 117
Query: 165 LKAKTSGSPPVKLPLSLFNCKSLNKLELKGCH 196
L G ++P LFNC L LEL CH
Sbjct: 118 L-----GEGEFRVPACLFNCLKLTCLEL--CH 142
>AT4G09920.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr4:6224691-6225905
FORWARD LENGTH=316
Length = 316
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 4/140 (2%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRFV 115
DR LP+ V++ ILS + TK A+ T +LSKRW +LWM + L F SK + EFKR
Sbjct: 2 DRIIGLPDEVLVKILSFVPTKVAVSTSILSKRWEFLWMWLTKLKFGSKRYSE-SEFKR-- 58
Query: 116 LWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIR-INLKAKTSGSPP 174
L R+ + + F + + + + + +V + IR + + + G
Sbjct: 59 LQCFLDRNLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIRELKIYSSHYGEKQ 118
Query: 175 VKLPLSLFNCKSLNKLELKG 194
LP SL+ CKSL L+L G
Sbjct: 119 NILPSSLYTCKSLVILKLDG 138
>AT1G80470.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:30256185-30257916
FORWARD LENGTH=481
Length = 481
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 84/168 (50%), Gaps = 5/168 (2%)
Query: 25 GFEGSGPPMKKSKLQASTPQNIENSEAAESQDRFDNLPESVVLHILSLMETKDAIRTCVL 84
G G P + + + P +++ S+ ES D L + ++L ILS + T++++ T +
Sbjct: 3 GGRGKRPNSAEEEGTMAEP-SVKKSKLTES-DWISGLADDLLLQILSKVPTRESVFTSRM 60
Query: 85 SKRWRYLWMSVPCLNFNSKSFPRLVEFKRFVLWVLSHRDSSCVKVLIYYRFGVDYATDQY 144
SKRWR LW VP L+ +S FP + + F L D + + + V+ D
Sbjct: 61 SKRWRNLWRHVPALDLDSSKFPHESDLEDFFDSFLQF-DGNLKIERFKWIYNVEEHCDPE 119
Query: 145 LLDKVIEYVALHGVEEIRINLKAKTSGSPPVKLPLSLFNCKSLNKLEL 192
+ + I++V G++++ I K V++P+SL++C +L L L
Sbjct: 120 FVSR-IDHVVKRGLKDLTILSKVNIEDD-SVRMPVSLYSCATLVNLTL 165
>AT1G32375.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:11679230-11680679
FORWARD LENGTH=422
Length = 422
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 7/132 (5%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNF-NSKSFPRLVEFKRF 114
D+ LPE++++ ILSL+ KD + T VLSKRW++LWM VP L + +S F RF
Sbjct: 2 DKLSQLPEALLVRILSLLSAKDVVSTMVLSKRWQFLWMLVPKLIYDDSYQAIEYGSFSRF 61
Query: 115 VLWVLSHRDSSCVKVLIYYRFGVDY--ATDQYLLDKVIEYVALHGVEEIRINLKAKTSGS 172
V + D+ + L +++ G D + K E L E+ I + S +
Sbjct: 62 VDRSFTLHDAQVLDTL-HFKLGKTSCGTGDIRVWIKTAEKSCLR---ELIIEIDKSNSDN 117
Query: 173 PPVKLPLSLFNC 184
V LP SL+ C
Sbjct: 118 SSVVLPRSLYTC 129
>AT1G26890.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr1:9317589-9319078
FORWARD LENGTH=419
Length = 419
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 47 ENSEAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNF---NSK 103
E ++ R P ++L IL + TK+A+ T +LSKRWRY+W VP L F +S+
Sbjct: 29 ETESCQINETRICAFPNDLLLQILHHVPTKEAVATSILSKRWRYVWPMVPRLEFKEDDSE 88
Query: 104 SFPRLVEFKRFVLWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRI 163
S +E K L DS V++ + VD K +E V GV+E+
Sbjct: 89 SVGWFIE-KSLQLHKAPKLDSLVVELGPHCPVDVDVG-------KWVENVVNRGVKELDF 140
Query: 164 NLKAKTSGSPPVKLPLSLFNCKSLNKLELKGCHPTNVSSP 203
NL + P P L+ C +L L L NVSSP
Sbjct: 141 NL---LWTAEPTGFPKCLYTCNTLVDLSLSNKILVNVSSP 177
>AT4G15060.1 | Symbols: | CONTAINS InterPro DOMAIN/s: FBD
(InterPro:IPR013596), F-box domain, Skp2-like
(InterPro:IPR022364), FBD-like (InterPro:IPR006566),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is: FBD, F-box and
Leucine Rich Repeat domains containing protein
(TAIR:AT1G55660.1); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses -
0; Other Eukaryotes - 2996 (source: NCBI BLink). |
chr4:8599035-8601761 FORWARD LENGTH=539
Length = 539
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 8/180 (4%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVE--FKR 113
D+ LP+ +++ +L + TK A+ T +LSKRW +LWM +P L +++ ++ E +
Sbjct: 172 DKISRLPDDLLVKVLLFLPTKIAVSTSILSKRWEFLWMWLPKLEYHNTNYSASEEQRLRS 231
Query: 114 FVLWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAKTSGSP 173
F+ L + ++ L +F + + + + I V E+ INL
Sbjct: 232 FINLNLQLHRAPIIESL-RLKFSLGRSIKPQNIKQWIIIAVFRCVRELSINLFPLYCIEN 290
Query: 174 PVKLPLSLFNCKSLNKLELKGCHPTNVSSPHGCRSVEMPHSEQLSMHPATADNANSLASL 233
P KLP SL+ KSL L+LK +V R +P + L + T ++NSL L
Sbjct: 291 PAKLPSSLYISKSLVILKLKDQILVDVP-----RMAYLPSLKYLLLKRVTYKDSNSLHQL 345
>AT3G26922.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:9922858-9923891 FORWARD LENGTH=306
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 54 SQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKR 113
++DR +LPE+++L ILS++ KD + T VLSK WR LW VP L F+ ++ E
Sbjct: 12 NEDRISDLPEALLLQILSMLPVKDVVTTSVLSKPWRSLWKLVPTLKFDYENNQSEDETYS 71
Query: 114 FVL--WVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAKTSG 171
++ +LS++ + + +RFG + + V ++ + +R + S
Sbjct: 72 EIVCRLLLSNKAPFLESLHLGFRFGECRSVE------VGMWIGIAYARHVRDLVLHVESV 125
Query: 172 SPPVKLPLSLFNCKSLNKLELKGCHPTNVSSPHGCRSV 209
P L+NC++L L L+ +V SP +S+
Sbjct: 126 KGSFIFPTGLYNCETLESLTLRSWVLVDVPSPACLKSL 163
>AT5G56370.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22836200-22837619
REVERSE LENGTH=421
Length = 421
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 4/160 (2%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRFV 115
D LP+ +L ILSL+ TKD + T VLSKRWRYLW VP L ++ + + FV
Sbjct: 2 DSISLLPDDFLLRILSLLPTKDVLNTSVLSKRWRYLWKLVPKLQYS--LIDKNADHGTFV 59
Query: 116 LWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAKTSGSPPV 175
+V S VL + + + + G+ E ++ + + P
Sbjct: 60 RFVDRSLLLSMAPVLESLHLKLGRQCSEVDIGFWVRIAVEKGLCE--LDFDYEHYKTEPC 117
Query: 176 KLPLSLFNCKSLNKLELKGCHPTNVSSPHGCRSVEMPHSE 215
+LP SLF C +L L+LK +V P + ++ H E
Sbjct: 118 RLPQSLFTCGTLTVLKLKNVSLKDVQFPVCFKLLKTLHLE 157
>AT5G56370.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22836200-22837619
REVERSE LENGTH=421
Length = 421
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 4/160 (2%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRFV 115
D LP+ +L ILSL+ TKD + T VLSKRWRYLW VP L ++ + + FV
Sbjct: 2 DSISLLPDDFLLRILSLLPTKDVLNTSVLSKRWRYLWKLVPKLQYS--LIDKNADHGTFV 59
Query: 116 LWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAKTSGSPPV 175
+V S VL + + + + G+ E ++ + + P
Sbjct: 60 RFVDRSLLLSMAPVLESLHLKLGRQCSEVDIGFWVRIAVEKGLCE--LDFDYEHYKTEPC 117
Query: 176 KLPLSLFNCKSLNKLELKGCHPTNVSSPHGCRSVEMPHSE 215
+LP SLF C +L L+LK +V P + ++ H E
Sbjct: 118 RLPQSLFTCGTLTVLKLKNVSLKDVQFPVCFKLLKTLHLE 157
>AT1G13780.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:4724681-4726314
FORWARD LENGTH=456
Length = 456
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 83/154 (53%), Gaps = 27/154 (17%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFP-------RL 108
DR LPES++ IL + TK +++T VLS RW+ LW++VP L+ N + FP L
Sbjct: 10 DRISELPESLISQILLHLPTKASVKTSVLSTRWKNLWLNVPGLDLNCRDFPFQNNNEKLL 69
Query: 109 VEF-KRFVLWVLSHRDSSCVKVLIYYRFGVDYATDQYLL--DKVIEYVALHGVEEIRINL 165
++F RF L + S ++ +F VDY+ D+ + D++ + ++ G+ + +
Sbjct: 70 IDFIDRF----LQFNNESRLQ-----KFKVDYSRDKIIKFSDRIGDAIS-RGIRVLDVES 119
Query: 166 KAKTSGS------PPVK-LPLSLFNCKSLNKLEL 192
+ P ++ +PL+L++CK+L L+L
Sbjct: 120 NTYYRDADDCIDYPCIEFMPLNLYSCKTLVSLKL 153
>AT5G18780.2 | Symbols: | F-box/RNI-like superfamily protein |
chr5:6264610-6266097 FORWARD LENGTH=441
Length = 441
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 52 AESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSF 105
+DR LPE ++ HILS + TKD++RT VLS RWR LW+ VP L+ + F
Sbjct: 7 GSGEDRISILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWLWVPRLDLDKSDF 60
>AT5G18780.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:6264610-6266097 FORWARD LENGTH=441
Length = 441
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 52 AESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSF 105
+DR LPE ++ HILS + TKD++RT VLS RWR LW+ VP L+ + F
Sbjct: 7 GSGEDRISILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWLWVPRLDLDKSDF 60
>AT5G22610.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:7515217-7516916
FORWARD LENGTH=472
Length = 472
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 44 QNIENSEAAES---QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNF 100
+NIE E +D LPE ++ ILS + TKD +RT VLSKRW+ +W+ +P L+
Sbjct: 3 ENIEKRICVEQLAIEDLISKLPEVLLSQILSYLPTKDIVRTSVLSKRWKSVWLLIPGLDL 62
Query: 101 NSKSFPRLVEFKRFV 115
+S FP F F+
Sbjct: 63 DSSEFPHYDTFVDFM 77
>AT2G26860.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr2:11452196-11453584
REVERSE LENGTH=405
Length = 405
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 83/184 (45%), Gaps = 15/184 (8%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRFV 115
DR LP+ +++ IL + TK+ + T +LSKRW +LW+ VP L F + + + F+
Sbjct: 2 DRISGLPDELLVEILHCLPTKEVVSTSILSKRWEFLWLWVPKLTFVMNHYESDLPIQDFI 61
Query: 116 LWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVAL---HGVEEIRINLKAKTSGS 172
++ +K + F + + + + + +V V E+ IN +
Sbjct: 62 -----TKNLRLLKPQVIESFHLQCFSSSFKPEDIKHWVVTTISRRVRELIINYCDLSWLD 116
Query: 173 PPV---KLPLSLFNCKSLNKLELKGCHPTNVSSPHGCRSVEMPHSEQLSMHPATADNANS 229
PV LP SL+ C SL L+L G H V P R+V +P + L + N S
Sbjct: 117 KPVVLLDLPNSLYTCTSLVTLKLIG-HSIIVDVP---RTVSLPCLKTLELDSVAYSNEES 172
Query: 230 LASL 233
L L
Sbjct: 173 LRLL 176
>AT4G00160.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:63465-65365 FORWARD
LENGTH=453
Length = 453
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 19/173 (10%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEF--- 111
+DR LP+++++ ILS + TK + T V SK+WR LW VP L F+S+ + ++
Sbjct: 15 KDRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLEFDSEDYDDKEQYTFS 74
Query: 112 ----KRFVLWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIR--INL 165
K F LSH K + F +++ +++ + +V + +R + +
Sbjct: 75 EIVCKSF----LSH------KAPVLESFRLEFESEKVDPVDIGLWVGIAFSRHLRELVLV 124
Query: 166 KAKTSGSPPVKLPLSLFNCKSLNKLELKGCHPTNVSSPHGCRSVEMPHSEQLS 218
A T K P SL C +L L L ++SSP +S+ H E +S
Sbjct: 125 AADTGTGTAFKFPSSLCTCNTLETLRLVLLILVDISSPVVMKSLRTLHLELVS 177
>AT2G26860.2 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr2:11452421-11453584
REVERSE LENGTH=355
Length = 355
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 83/185 (44%), Gaps = 15/185 (8%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRF 114
DR LP+ +++ IL + TK+ + T +LSKRW +LW+ VP L F + + + F
Sbjct: 1 MDRISGLPDELLVEILHCLPTKEVVSTSILSKRWEFLWLWVPKLTFVMNHYESDLPIQDF 60
Query: 115 VLWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVAL---HGVEEIRINLKAKTSG 171
+ ++ +K + F + + + + + +V V E+ IN +
Sbjct: 61 I-----TKNLRLLKPQVIESFHLQCFSSSFKPEDIKHWVVTTISRRVRELIINYCDLSWL 115
Query: 172 SPPV---KLPLSLFNCKSLNKLELKGCHPTNVSSPHGCRSVEMPHSEQLSMHPATADNAN 228
PV LP SL+ C SL L+L G H V P R+V +P + L + N
Sbjct: 116 DKPVVLLDLPNSLYTCTSLVTLKLIG-HSIIVDVP---RTVSLPCLKTLELDSVAYSNEE 171
Query: 229 SLASL 233
SL L
Sbjct: 172 SLRLL 176
>AT4G03220.1 | Symbols: | Protein with RNI-like/FBD-like domains |
chr4:1417472-1419148 FORWARD LENGTH=498
Length = 498
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 66/120 (55%), Gaps = 14/120 (11%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNF-------NSKSFPRL 108
DR NLP+S+ IL L+ K A + +LSKRWR L++S+P L+F N KSF
Sbjct: 24 DRISNLPDSLNHQILLLLPLKSAAQASLLSKRWRSLFLSLPDLDFTSINDLKNPKSFSSN 83
Query: 109 VEFKRFVLWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAK 168
+K VL + SHRDS+ ++ L +R V + + L+ +I H V+++ I + K
Sbjct: 84 SIYK--VLSLRSHRDSNNLRSL-RFRVPVTFTS----LNSLIRLAVTHQVQDLDIEVTTK 136
>AT1G58310.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:21631947-21633642 FORWARD LENGTH=505
Length = 505
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 72/154 (46%), Gaps = 29/154 (18%)
Query: 52 AESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRL--- 108
S+D LP+S++ HILS + TK+A T VL+K+WRYL+ SVP L+F+ RL
Sbjct: 4 GRSRDIISGLPDSLLCHILSFLNTKEAASTSVLAKKWRYLFASVPNLDFDDSVHLRLGKR 63
Query: 109 ---------------------VEFKRFVLWVLSHRDSSCV-KVLIYYRFGVDYATDQYLL 146
F FV VL +D+S + K + R VD +
Sbjct: 64 NPAVSGEDYLKMINERSDQLSTSFMDFVDQVLRLQDNSPLHKFSLKIRDCVDIVRIICWI 123
Query: 147 DKVIEYVALHGVEEIRINLKAKTSGSPPVKLPLS 180
KV+E GV ++ +++ K S P K+ LS
Sbjct: 124 LKVLE----RGVSDLELDMHLKWKSSLPSKIFLS 153
>AT3G59000.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21799757-21801536 FORWARD LENGTH=491
Length = 491
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 76/152 (50%), Gaps = 17/152 (11%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSF-------PRL 108
DR +LP+ ++ HILS + TK+A T +LSKRWRYL VP L F+ F P
Sbjct: 2 DRVGSLPDELLSHILSFLTTKEAALTSLLSKRWRYLIAFVPNLAFDDIVFLHPEEGKPER 61
Query: 109 VE----FKRFVLWVLSHRDSSCVKVL-IYYRFGVDYATDQYLLDKVIEYVALHGVEEIRI 163
E F FV VL+ + S +K + R GVD +D+ +D I V GV E+ +
Sbjct: 62 DEIRQSFMDFVDRVLALQAESPIKKFSLKCRIGVD--SDR--VDGWISNVLNRGVSELDL 117
Query: 164 NLKAKTSGSPPVKLPLSLFNCKSLNKLELKGC 195
+ + +L F K+L KLE+ GC
Sbjct: 118 LIILGMTMEDSYRLSPKGFASKTLVKLEI-GC 148
>AT5G22670.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:7538192-7539685
REVERSE LENGTH=443
Length = 443
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 87/196 (44%), Gaps = 21/196 (10%)
Query: 46 IENSEAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSF 105
+ SQD LP+ ++ ILS + TK A+RT VLSKRW+ +SVP L FN F
Sbjct: 1 MSTKRGVTSQDSISLLPDDLLCRILSNLPTKVAVRTSVLSKRWKRFSLSVPLLEFNVSEF 60
Query: 106 PRLVEFKRFVLWVLSHRDSSCVKVLIYYRFGVDYATDQY---LLDKVIEYVALHGVEEIR 162
EF R V L +C+ ++ + + Q+ L + I V+ +
Sbjct: 61 HGYYEFARVVHGFLDTSRETCI-----HKLKLAFEKKQHDRSYLTQWIHNAVKRKVQHLD 115
Query: 163 INLKAKTSGSPPVKLPLSLFNCKSLNKLELKGCHPTNVSSPHGCRSVEMPHSEQL----S 218
I + S +P SL+ C++L L L NVS P V +P + + +
Sbjct: 116 I---GRWSYLGQELIPHSLYTCETLVSLRLH-----NVSLP-DFDHVSLPRLKTMHLIDN 166
Query: 219 MHPATADNANSLASLP 234
++P A N ++S P
Sbjct: 167 IYPNDALLENLISSCP 182
>AT1G66320.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:24727041-24728614 REVERSE LENGTH=457
Length = 457
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 10/165 (6%)
Query: 39 QASTPQNIENSEAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCL 98
++S P++ + + E +LPES++ +L + TKD ++T V+S WR+LW VP L
Sbjct: 13 RSSFPESSDKNSGDEGDWVRRDLPESLLFQVLLNIPTKDLVKTSVVSPEWRHLWRCVPGL 72
Query: 99 NFNSKSFPRLVEFKRFVLWVLS-HRDSSC--VKVLIYYRFGVDYATDQYLLDKVIEYVAL 155
+ + F + F+ LS +R+SS K+ IY D T+ + + I +
Sbjct: 73 DLDEADFTQFDTLVSFIDSFLSINRESSLNKFKLRIYCNHDRDKETNNAHMARWISAIVE 132
Query: 156 HGVEEIRINLKAKTSGSPPVKLPLSLFNCKSLNKLELKGCHPTNV 200
V+ + + PV++P L+ C+SL L L G N+
Sbjct: 133 QNVQHVDLTWL-------PVEVPPILYLCESLVTLRLCGVVLANL 170
>AT5G38570.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:15449279-15450601 REVERSE LENGTH=379
Length = 379
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 85/186 (45%), Gaps = 22/186 (11%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNS--KSFPRLVEFKR 113
D + LP+ +++ ILS + T A+ TCVLSKRW +LWM +P L F S S P +V+F
Sbjct: 2 DNINGLPDDLLVKILSFVPTYVAVSTCVLSKRWEFLWMWLPNLEFVSPWDSRPGIVDFIN 61
Query: 114 FVLWVLSHRDSSCVKVLI-----------YYRFGVDYATDQYLLDKVIEYVALHGVEEIR 162
L + HR ++ I Y + ++ A Y+ + I+Y H +I
Sbjct: 62 KKLPI--HRAPVIERLCIHINSNPHIKPEYIKRWIEIAVSHYVRELQIDY---HSKTKIT 116
Query: 163 INLKAKTSGSPPVKLPLSLFNCKSLNKLELKGCHPTNVSSPHGCRSVEMPHSEQLSMHPA 222
+ L+A++ L + C L L L+ C N+ +V +P + LS+
Sbjct: 117 LQLEAESYFIDGKYLQQLISGCPVLEDLSLRFCCNDNLRE----FTVIIPSLQSLSLFLF 172
Query: 223 TADNAN 228
N N
Sbjct: 173 GNSNLN 178
>AT5G44950.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:18151665-18153164
FORWARD LENGTH=438
Length = 438
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 85/191 (44%), Gaps = 40/191 (20%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFP-------- 106
+DR LP+ ++ HIL + +++IRT VLS RWR LW+ VP L+ N FP
Sbjct: 3 RDRISELPDGLLNHILMYLHIEESIRTSVLSSRWRKLWLKVPGLDVNVHDFPADGNLFES 62
Query: 107 ---RLVEFKRFVLWVLSHRDSSCVKVLIYYRFGVDYATD-QYLLDKVIEYVAL---HGVE 159
+ +E R L F ++Y ++ YL+D+ + ++A G++
Sbjct: 63 LMDKFLEVNRGRL----------------QNFKLNYESNLYYLMDRFVPWIATVVDRGIQ 106
Query: 160 EIRINLKAKTSGSPPVKLPLSLFN-CKSLNKLELKGCHPTNVSSPHGCRS---VEMPHSE 215
+L + PP + N CKS + LK + + +P S +++ H E
Sbjct: 107 ----HLDVTATDCPPWTIDFMPANICKSKTLVSLKLVN-VGLDTPKFVVSLPCLKIMHLE 161
Query: 216 QLSMHPATADN 226
+ P A+N
Sbjct: 162 DIFYSPLIAEN 172
>AT5G53640.1 | Symbols: | CONTAINS InterPro DOMAIN/s: F-box domain,
cyclin-like (InterPro:IPR001810), FBD
(InterPro:IPR013596), FBD-like (InterPro:IPR006566),
F-box domain, Skp2-like (InterPro:IPR022364),
Leucine-rich repeat 2 (InterPro:IPR013101); BEST
Arabidopsis thaliana protein match is:
F-box/RNI-like/FBD-like domains-containing protein
(TAIR:AT5G53635.1); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes
- 339 (source: NCBI BLink). | chr5:21788311-21790690
REVERSE LENGTH=517
Length = 517
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 14/160 (8%)
Query: 34 KKSKLQASTPQNIENSEAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWM 93
KKSK S N E DR ES++ IL+ + TKD ++T VLS RWR LW+
Sbjct: 5 KKSKQACSKGLNQRLKE-----DRISQFYESLLCQILNYLPTKDVVKTSVLSTRWRSLWL 59
Query: 94 SVPCLNFNSKSFPRLVEFKRFVLWVLSHRDSSCVKVLIYYRFGV-DYATDQYLLDKVIEY 152
VP L +S+ F +F FV + + DS+ V + + + + D + L I+
Sbjct: 60 LVPSLELDSRDFS---DFNTFVSFCDRYFDSNRVLCINKLKLTISENEEDGFYLKSWIDA 116
Query: 153 VALHGVEEIRINLKAKTSGSPPVKLPLSLFNCKSLNKLEL 192
A ++ + + + K+ +L+ C++L L L
Sbjct: 117 AAKRKIQHLDVQFLPQFH-----KIHFNLYKCEALVSLRL 151
>AT5G02920.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:680541-681317 FORWARD LENGTH=258
Length = 258
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 66/145 (45%), Gaps = 16/145 (11%)
Query: 53 ESQDRFDNLPESVVLHILSLM-ETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSF-PRLVE 110
S D NLP+ ++ HILS + ET IRT VLSKRWR++W P L+F P+L+
Sbjct: 25 RSSDSISNLPDEILHHILSFIPETNLVIRTSVLSKRWRHVWSKTPHLSFEWLMVSPKLIN 84
Query: 111 FKRFVLWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAKTS 170
K + S S + Y+ + + IE+ H V+ NL S
Sbjct: 85 -KTLASYTASKITS--------FHLCTSYSYEAGHVHSSIEFAMSHNVD----NLSLAFS 131
Query: 171 GSPPV-KLPLSLFNCKSLNKLELKG 194
PP K P + SL ++EL+
Sbjct: 132 SFPPCNKFPDFFYTSSSLKRVELRS 156
>AT5G27750.1 | Symbols: | F-box/FBD-like domains containing protein
| chr5:9828430-9829981 FORWARD LENGTH=459
Length = 459
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFP 106
DR LPES++ IL + TKD+++T VLS RW+ LW++VP L+ FP
Sbjct: 5 DRISELPESLITQILLCLPTKDSVKTSVLSTRWKNLWLNVPGLDLTCSDFP 55
>AT5G54820.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:22269859-22271777 FORWARD LENGTH=472
Length = 472
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 31/183 (16%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSK----------S 104
QDR +LP+ +++ I+S + K+ +RT VLSKRWRYL + L+F
Sbjct: 6 QDRLSSLPDILLIMIISFLPLKECVRTSVLSKRWRYLCLETTNLSFKESDYVNPDITDAE 65
Query: 105 FPRLVEFKRFVL----WV--LSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGV 158
+ R+V ++ F WV H+ ++ + G + D+ +D +IEY V
Sbjct: 66 YSRIVAYRSFFCSVDKWVSITQHQVVESFEICFSHLVGFE---DK--IDALIEYAVSTRV 120
Query: 159 EEIRINLKA---KTSGSPPVK-----LPLSLFNCKSLNKLELKGCH--PTNVSSPHGCRS 208
+ + ++L +++G + LP S+++ +L L++ GC P+ +P RS
Sbjct: 121 KNLVVDLSNPSWRSNGDISYRHFMYTLPKSVYSLTTLESLKIYGCKFDPSKFVNPVLLRS 180
Query: 209 VEM 211
+ +
Sbjct: 181 LSI 183
>AT1G66310.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr1:24722971-24724475
REVERSE LENGTH=442
Length = 442
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 73/157 (46%), Gaps = 13/157 (8%)
Query: 50 EAAESQDRFD---NLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFP 106
A +S D D +LPES++ HIL + TKD ++T VLS +WR LW VP L+ +S F
Sbjct: 10 RAKQSDDEVDWLRDLPESLLCHILLNLPTKDVVKTSVLSSKWRNLWRLVPGLDLDSSDFT 69
Query: 107 RLVEFKRFVLWVLS-HRDSSC--VKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRI 163
F F+ +S H D K+ + D ++ + + I V V + +
Sbjct: 70 ENNTFVSFIDRFMSFHSDLYLKKFKLRFFCNLNGDEVSENAHIARWINDVVKRKVHNLDL 129
Query: 164 NLKAKTSGSPPVKLPLSLFNCKSLNKLELKGCHPTNV 200
A V++P L+ C SL L+L G N+
Sbjct: 130 TWGA-------VEIPPILYLCNSLVSLKLCGVTLPNL 159
>AT2G04230.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr2:1447025-1448678
REVERSE LENGTH=448
Length = 448
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 38/53 (71%)
Query: 54 SQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFP 106
++DR +LP++++L ILS + T++AI T VLSKRWR LW +P L F+S P
Sbjct: 11 NEDRISDLPDALLLQILSSLPTENAIATSVLSKRWRSLWTMLPKLKFDSNFNP 63
>AT2G26030.3 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr2:11091505-11093000
REVERSE LENGTH=442
Length = 442
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFP 106
DR LP+S++ +LS + T D+++T VLSKRW +LW+ VP L+ FP
Sbjct: 4 DRICELPDSLLTQVLSYLPTIDSVKTSVLSKRWEFLWLRVPVLDLKVSDFP 54
>AT2G26030.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr2:11091505-11093000
REVERSE LENGTH=442
Length = 442
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFP 106
DR LP+S++ +LS + T D+++T VLSKRW +LW+ VP L+ FP
Sbjct: 4 DRICELPDSLLTQVLSYLPTIDSVKTSVLSKRWEFLWLRVPVLDLKVSDFP 54
>AT3G58880.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21768485-21770167 REVERSE LENGTH=454
Length = 454
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 54/116 (46%), Gaps = 24/116 (20%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRFV 115
D +LP+ ++ HILSL+ TK+A T +LSKRWRYL VP L F+ +F E K+
Sbjct: 3 DLVSSLPDDLLGHILSLLTTKEAALTSILSKRWRYLIAFVPYLEFDDSAFLNPEEGKQ-- 60
Query: 116 LWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIR-INLKAKTS 170
T Q +D V +ALHG IR +LK KT
Sbjct: 61 ---------------------TREGTRQSFIDFVDRVLALHGDSPIRKFSLKCKTG 95
>AT3G50710.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:18845199-18846673
REVERSE LENGTH=427
Length = 427
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 1/146 (0%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRFV 115
DR NL + ++L I+S + TKD + T +LSKRW++LWM VP L F+ + + RF+
Sbjct: 2 DRISNLSDDLLLKIVSSLPTKDVVVTMLLSKRWKFLWMMVPKLRFDDEFELEPSYYGRFL 61
Query: 116 LWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRI-NLKAKTSGSPP 174
+V + +VL +F V + I + + E+ I + +
Sbjct: 62 KYVDKSMVLNRAQVLETVKFNVGPCCSSEDIATWIRIGMVRNMRELEISHCEGYFREHRS 121
Query: 175 VKLPLSLFNCKSLNKLELKGCHPTNV 200
+KLP SL+ + L L+L NV
Sbjct: 122 IKLPKSLYTYEKLEVLKLASTVVLNV 147
>AT5G02930.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:682577-684480 FORWARD LENGTH=469
Length = 469
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNS-KSFPRLVEFKRF 114
D +LP++V+ HI S + T+ AIRT VLSKRWR++W P L+F K P+L+
Sbjct: 28 DSISDLPDAVLQHIFSYIPTELAIRTSVLSKRWRHVWSETPHLSFEWLKVSPKLINKT-- 85
Query: 115 VLWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAKTSGSPP 174
+ S+ S + R+ Y D + ++ IE+ H V+++ + + SP
Sbjct: 86 ---LASYTASKIKSFHLCTRYS--YEADTHHVNSSIEFAMSHNVDDLSLAFR---RCSPF 137
Query: 175 VKLPLSLFNCKSLNKLELK 193
+ SL ++EL+
Sbjct: 138 YNFDDCFYTNSSLKRVELR 156
>AT5G50270.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:20457487-20458873
FORWARD LENGTH=381
Length = 381
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 9/152 (5%)
Query: 56 DRFDNLP-ESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLV--EFK 112
DR LP E ++ + L KD + T VLSKRW++LWM VP L ++ S+ L +F
Sbjct: 2 DRISGLPDELLLRVLSLLPNVKDVVVTMVLSKRWQFLWMMVPKLVYDD-SYQNLEYGKFS 60
Query: 113 RFVLWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAKTSGS 172
RFV L R + ++ L +++ G + + I + E+ I + TS S
Sbjct: 61 RFVDRSLFMRKAPGIETL-HFKLGQNCGNGD--IQWWIRAASKFCFRELIIEINCSTSAS 117
Query: 173 PPVKLPLSLFN-CKSLNKLELKGCHPTNVSSP 203
P + LP SL+ C+ L L+LK +VSSP
Sbjct: 118 PSI-LPRSLYTECRMLVTLKLKKAVLVDVSSP 148
>AT5G56440.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22855742-22857117
REVERSE LENGTH=430
Length = 430
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 9/140 (6%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFK--R 113
DR LP+ VV ILS + TK + T +LSKRWRYLW VP L++ S ++ R
Sbjct: 2 DRISLLPDDVVFKILSFVPTKVVVSTNLLSKRWRYLWKHVPKLDYRDPSLVDTEHWRASR 61
Query: 114 FV-LWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAKTSGS 172
FV ++L H VL + ++ I V + I ++G
Sbjct: 62 FVDKFLLLHE----APVLETLHLSLSRNCPPSDIETWISVAISRRVRNLHIYRYIPSTG- 116
Query: 173 PPVKLPLSLFNCKSLNKLEL 192
P++LP SL+ C++L L L
Sbjct: 117 -PIRLPRSLYTCETLVSLYL 135
>AT4G14103.2 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8126948-8128590 FORWARD LENGTH=443
Length = 443
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 50 EAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSF--PR 107
+ + S+D +LP+ + HILS + TK+A T VLSK+WRYL+ VP L+ + + P
Sbjct: 2 DLSGSRDVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPE 61
Query: 108 -----LVEFKRFVLWVLSHRDSSCV-KVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEI 161
F FV VL+ + +S + K + G+D ++ V+E GV ++
Sbjct: 62 NETEISTSFMDFVDRVLALQGNSPLHKFSLKIGDGIDPVRIIPWINNVLE----RGVSDL 117
Query: 162 RINLKAKTSGSPPVKLPLSLFNCKSLNKLELK-GCHPT 198
++L ++ LP ++ CK+L L+L+ G +PT
Sbjct: 118 DLHLNLESE----FLLPSQVYLCKTLVWLKLRFGLYPT 151
>AT4G13985.1 | Symbols: FBD1 | FBD-associated F-box protein |
chr4:8080118-8081669 REVERSE LENGTH=459
Length = 459
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 75/174 (43%), Gaps = 17/174 (9%)
Query: 38 LQASTPQNIENSEAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVP- 96
++ + + + DR NLP+ ++ IL + TKD ++ VLS+RWR +W VP
Sbjct: 1 MEEDRESRVSAKPSGDRVDRLRNLPDCLLFKILLNLPTKDVVKLSVLSRRWRNVWRYVPG 60
Query: 97 ----CLNFNSKSFPRLVEFKR---FVLWVLSHRDSSCVKVLIYYRFGVDYATDQYL---- 145
C +F + + EF FV L SC++ ++ V++ D L
Sbjct: 61 LDLECGDFMVREYYDSSEFNALLGFVYRFLGFNSESCLQ---KFKLTVNWYDDVQLETVH 117
Query: 146 LDKVIEYVALHGVEEIRINLKAKTSGSPPVKLPLSLFNCKSLNKLELKGCHPTN 199
+ V V+ + I KT G V +P ++F C SL L L + N
Sbjct: 118 FTEWFNAVVKRKVQHLHI--LDKTWGRDEVVIPPTVFTCGSLISLNLYDVYLPN 169
>AT3G51530.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19112873-19114497
REVERSE LENGTH=455
Length = 455
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 126/304 (41%), Gaps = 47/304 (15%)
Query: 26 FEGSGPPMKKSKLQASTPQNIENSEAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLS 85
F + P M++ + P + S+DR LPE ++L ILS + TK I T VLS
Sbjct: 7 FSAAKPLMEQGGKSSRKPGFM-------SEDRISELPEVLLLQILSSLPTKLVISTSVLS 59
Query: 86 KRWRYLWMSVPCLNFNSKSFPRLVEFKRFVLW-VLSHR----DSSCVKV-----LIYYRF 135
KRW LW V L F S + +F V +LSH+ +S +KV +Y
Sbjct: 60 KRWLSLWKMVQRLEFESSR--NIYDFAENVTRSLLSHKAPVLESLHLKVGDQFDGVYVGV 117
Query: 136 GVDYATDQYLLDKVIEYVALHGVEEIRINLKAKTSGSPPVKLPLSLFNCKSLNKLELKGC 195
A +++ + V++ + HG P V+ P SLF +L L+L
Sbjct: 118 WATIAFTRHVREFVLDLSSYHG---------------PRVRFPTSLFCFDTLETLKLDYV 162
Query: 196 HPTNVSSPHGCRSVEMPHSEQLSMHPATADNANSLASLPEXXXXXXXXXXXXXXXXXCYT 255
+ V P +S+ H + ++ N AS P +
Sbjct: 163 Y-IYVPCPVSMKSLRTLHLLSV-VYKGDESGHNLFASCPN---------LEHLVLRRGFF 211
Query: 256 GNEVLDPFVNCVNLKDLHLSEMSFKSQLIPRDFVISAPRLSNLTL-MCNRFKCKLVVNAP 314
+ V++ ++ +LK L LS+ F ++ R +VI AP L L + F+ L+ N
Sbjct: 212 FDAVVNFIIDAPSLKTLLLSD-PFSARESSRGYVIKAPSLKYLGIESVEGFEYFLIENVT 270
Query: 315 QLIN 318
+L+
Sbjct: 271 ELVE 274
>AT5G60610.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:24364049-24365386 FORWARD LENGTH=388
Length = 388
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 73/140 (52%), Gaps = 10/140 (7%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRFV 115
DR LP+ +++ I+S + TK A+ T +LSKRW LW VP L + P L +F
Sbjct: 2 DRISGLPDELLVKIISFVPTKVAVSTSILSKRWESLWKWVPKLECDCTE-PALRDFILKN 60
Query: 116 LWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVAL-HGVEEIRINLKAKTSGSPP 174
L + + S +Y RF + Q + K+ +A+ H + E+RI+ + +P
Sbjct: 61 LPLQARIIES-----LYLRFRRESFLFQDI--KLWGGIAISHCLRELRIDFFSHY-ANPY 112
Query: 175 VKLPLSLFNCKSLNKLELKG 194
V LP SL+ CKSL L+L G
Sbjct: 113 VILPRSLYTCKSLVTLKLLG 132
>AT5G56820.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22976334-22977838
FORWARD LENGTH=435
Length = 435
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 49 SEAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKS 104
SE DR LP+ ++L ILS + T DAI T +LSKRW+++W +P L+ + S
Sbjct: 8 SEEVSYSDRISYLPDDLLLRILSFIHTSDAISTSLLSKRWKFVWKMMPTLDLDEDS 63
>AT5G02910.2 | Symbols: | F-box/RNI-like superfamily protein |
chr5:677120-678588 FORWARD LENGTH=353
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 50 EAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSK 103
++ + D +LP+ ++ HILS + TK AIRT +LSKRWRY+W P L+ + +
Sbjct: 5 DSIDGMDFISSLPDEILHHILSSVPTKSAIRTSLLSKRWRYVWSETPSLSIDCR 58
>AT5G38565.1 | Symbols: | F-box/FBD-like domains containing protein
| chr5:15444571-15446009 REVERSE LENGTH=349
Length = 349
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNS 102
D F+ LP+ V++ ILS + TK A+ T +LSKRW +LWM +P L+F S
Sbjct: 2 DIFNGLPDDVLVKILSFVPTKVAVSTSILSKRWEFLWMWLPRLDFGS 48
>AT3G58980.1 | Symbols: | F-box family protein |
chr3:21794445-21797006 REVERSE LENGTH=594
Length = 594
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 70/140 (50%), Gaps = 11/140 (7%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRFV 115
DR NLP ++ HI+S + K+A +LSKRWR L+ V L F+ S K FV
Sbjct: 2 DRISNLPNEIICHIVSFLSAKEAAFASILSKRWRNLFTIVIKLQFDD-SVKNEGSLKDFV 60
Query: 116 LWVLSHRDSSCVK---VLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAKTSGS 172
VL+ SS V+ + F + D ++ I + G+ ++++++ A S
Sbjct: 61 DGVLALPTSSRVRSCSLECRREFDPTHYDD---FNRCICALLKRGILDLKLDICAGRRYS 117
Query: 173 PPVKLPLSLFNCKSLNKLEL 192
LPL +F CK+L KLEL
Sbjct: 118 ----LPLEVFTCKTLVKLEL 133
>AT5G02910.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:677120-678907 FORWARD LENGTH=458
Length = 458
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 50 EAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSK 103
++ + D +LP+ ++ HILS + TK AIRT +LSKRWRY+W P L+ + +
Sbjct: 5 DSIDGMDFISSLPDEILHHILSSVPTKSAIRTSLLSKRWRYVWSETPSLSIDCR 58
>AT4G14103.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8126948-8128305 FORWARD LENGTH=381
Length = 381
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 17/158 (10%)
Query: 50 EAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSF--PR 107
+ + S+D +LP+ + HILS + TK+A T VLSK+WRYL+ VP L+ + + P
Sbjct: 2 DLSGSRDVISSLPDDISSHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDDSVYLNPE 61
Query: 108 -----LVEFKRFVLWVLSHRDSSCV-KVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEI 161
F FV VL+ + +S + K + G+D ++ V+E GV ++
Sbjct: 62 NETEISTSFMDFVDRVLALQGNSPLHKFSLKIGDGIDPVRIIPWINNVLE----RGVSDL 117
Query: 162 RINLKAKTSGSPPVKLPLSLFNCKSLNKLELK-GCHPT 198
++L ++ LP ++ CK+L L+L+ G +PT
Sbjct: 118 DLHLNLESE----FLLPSQVYLCKTLVWLKLRFGLYPT 151
>AT3G59200.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21887484-21889214 FORWARD LENGTH=520
Length = 520
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 54 SQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSF 105
S+DR +LP VV HILS + TK+A T VLSK+WRYL+ V L+F+ +
Sbjct: 5 SRDRISSLPNPVVSHILSFLPTKEAASTSVLSKKWRYLFAYVTNLDFDDSDY 56
>AT3G49030.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr3:18173138-18174769
FORWARD LENGTH=443
Length = 443
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 52 AESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPR 107
A +DR LPE ++L ILS + T++ I T VLSKRWR LW VP L F+ P+
Sbjct: 17 AVKEDRISELPEDLLLQILSDIPTENVIATSVLSKRWRSLWKMVPNLTFDFTFDPK 72
>AT3G49030.2 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr3:18173138-18174769
FORWARD LENGTH=417
Length = 417
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 52 AESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPR 107
A +DR LPE ++L ILS + T++ I T VLSKRWR LW VP L F+ P+
Sbjct: 17 AVKEDRISELPEDLLLQILSDIPTENVIATSVLSKRWRSLWKMVPNLTFDFTFDPK 72
>AT3G52670.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein |
chr3:19525247-19526737 FORWARD LENGTH=384
Length = 384
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSF 105
+DR + LPE ++L ILS + T+ I T VLSK+WR LW VP L F+S +
Sbjct: 9 EDRMNQLPEDLILRILSFLPTELVIATSVLSKQWRSLWKLVPNLEFDSDDY 59
>AT3G58960.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:21787146-21788807
REVERSE LENGTH=475
Length = 475
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 3/137 (2%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRFV 115
DR +L ++ +I+S + KDA VLSKRW+ ++ VP L F++ + F+
Sbjct: 2 DRISSLSNDIISNIVSFLSAKDAAVASVLSKRWQNIYTIVPNLEFDN-TLENQGSLTDFL 60
Query: 116 LWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAKTSGSPPV 175
+L+ S+ +K + R G D L++ + V GV ++++++ G
Sbjct: 61 NGLLALPASTRIKNVSIKRRGRDGPNRDADLNRFLCNVLKRGVLKLKLDIWVTLDGR--Y 118
Query: 176 KLPLSLFNCKSLNKLEL 192
LP+ +F CK+L +LEL
Sbjct: 119 SLPVEVFTCKTLVELEL 135
>AT3G18150.1 | Symbols: | RNI-like superfamily protein |
chr3:6217929-6219500 FORWARD LENGTH=456
Length = 456
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 53 ESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFN 101
E+ D +LP+ ++ HILS + TK AI T +LSKRWR++W P L+FN
Sbjct: 28 EAVDSISSLPDVILQHILSFIPTKLAITTSLLSKRWRHVWCDTPSLSFN 76
>AT5G41840.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:16754436-16756263 REVERSE LENGTH=540
Length = 540
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 80/165 (48%), Gaps = 28/165 (16%)
Query: 54 SQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFN------------ 101
S DR LP++++ HILS + TK+A T VL+KRW+ L VP LNF+
Sbjct: 12 SGDRISGLPDALICHILSFLPTKEAASTTVLAKRWKPLLAFVPNLNFDDSIYFHPRARRN 71
Query: 102 --SKSFPRLVEFKRFVLWVLSHRDSSCVKVLIYYRFGV--DYATDQYLLDKVIEYVALHG 157
SKS+ + F VL L + + +K RF V + DQ + + I V G
Sbjct: 72 KYSKSYESFMSFVDSVL-ALQAKTKTPLK-----RFHVKCEDVVDQSWVLEWIPKVLKRG 125
Query: 158 VEEIRINLKAKTS---GSPPVKLPLSLFNCKSLNKLELK---GCH 196
V +I +++ + + S LP +F K+L +L+++ G H
Sbjct: 126 VLDIDLHITSSRNYCENSSFYSLPSKIFVSKTLVRLKIQFQDGVH 170
>AT3G59250.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21901726-21903284 REVERSE LENGTH=425
Length = 425
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 68/139 (48%), Gaps = 32/139 (23%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRF 114
+D+ NLPE+++ HILS + +D+ T VLSKRWRYL+ P L F+
Sbjct: 6 KDKISNLPEALICHILSFLPIEDSALTSVLSKRWRYLFAFRPNLVFD------------- 52
Query: 115 VLWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAKTSGSPP 174
DS C++ + DY T L V+E GV + ++L+ +G
Sbjct: 53 --------DSVCLRPPCGHGVIPDYVTSWIL--NVLE----RGV--LDLDLQVNVNG--- 93
Query: 175 VKLPLSLFNCKSLNKLELK 193
V+LP +F KSL +L ++
Sbjct: 94 VRLPSKVFVSKSLVRLRIE 112
>AT5G25850.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:9014082-9015917
FORWARD LENGTH=481
Length = 481
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 62/137 (45%), Gaps = 7/137 (5%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRFV 115
+R L + ++ ILS + K+ + T VLS RW+ +W+SVP L FP F+ F
Sbjct: 20 NRLSQLSDPLICQILSHLPIKEVVTTSVLSTRWKNIWLSVPSLELIYSIFPNFNTFRSFG 79
Query: 116 LWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAKTSGSPPV 175
SC+ L Y D YL + +V IR + G+
Sbjct: 80 DRFFDSTRVSCIHNLKLY---FDEHDACYLTSWINAFVT----RNIRRLYVRRVRGNYFH 132
Query: 176 KLPLSLFNCKSLNKLEL 192
+LPLSL+ C++L L+L
Sbjct: 133 ELPLSLYVCETLVSLKL 149
>AT1G22000.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr1:7744189-7747123
FORWARD LENGTH=717
Length = 717
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 8/149 (5%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRF 114
+ R LP+ ++L IL + TK+A+ T +LSK+WRY+W+ +P L F + + F +
Sbjct: 28 ETRICALPDDLLLQILPHVPTKEAVATSILSKQWRYVWLMLPKLEFKDEGSESVGWFIKK 87
Query: 115 VLWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAKTSGSPP 174
L + C+ V + +D ++ +E V+++ L + P
Sbjct: 88 SLQLHKAPKLDCLIVELGPHCPIDVDVRKW-----VENAVNRDVKDLDFTL---LWSAAP 139
Query: 175 VKLPLSLFNCKSLNKLELKGCHPTNVSSP 203
P SL+ C +L L L +VSSP
Sbjct: 140 TSFPKSLYTCDTLVCLTLSNQILVDVSSP 168
>AT5G44980.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:18160600-18162058
FORWARD LENGTH=435
Length = 435
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 61/115 (53%), Gaps = 11/115 (9%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFP---RLVEF 111
+D LP+S++ IL + TKD+++T VLSKRWR LW++VP L + F R F
Sbjct: 3 RDYISELPDSLLTQILLELRTKDSVKTSVLSKRWRNLWLNVPGLELFTLQFTYPDREEIF 62
Query: 112 KRFVLWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVAL---HGVEEIRI 163
RF+ + + S +K +F + Y + D+++E + HG++ + +
Sbjct: 63 VRFMDRFMEFKCRSRLK-----KFMITYVDCKGYRDRLMELIGTLVDHGLQHLYV 112
>AT3G59240.1 | Symbols: | RNI-like superfamily protein |
chr3:21898682-21900364 REVERSE LENGTH=504
Length = 504
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 78/149 (52%), Gaps = 18/149 (12%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPR--LV--- 109
+D +LPE+++ H+LS + TK+A T +LS++WRYL+ P L+F+ + + LV
Sbjct: 7 KDIISDLPEALICHLLSFVPTKEAALTSLLSEKWRYLFAFAPILDFDDSVWMQSPLVYMN 66
Query: 110 ----EFKRFVLWVLS-HRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRIN 164
+F FV VL +S+ V+ + R G+D + VIE GV ++ +
Sbjct: 67 EVHRKFMDFVDRVLGLQGNSTLVRFSLNCRNGIDRECIFRWISNVIE----RGVSDLDLG 122
Query: 165 LKAKTSGSPPVKLPLSLFNCKSLNKLELK 193
++ S +P S+F KSL KL ++
Sbjct: 123 GNFVSNRS----MPSSVFVSKSLVKLRIR 147
>AT5G56380.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22838836-22840353
REVERSE LENGTH=439
Length = 439
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 75/150 (50%), Gaps = 19/150 (12%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSF---------P 106
DR +L + ++ ILS + TKD ++T +LSKR++ W+ VP L F+ + P
Sbjct: 2 DRISHLADEILSKILSFLGTKDVMQTMLLSKRFKSQWLLVPKLEFDDSTHLPETWGYQEP 61
Query: 107 RLVEFKRFVLWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLK 166
F+RFV L R+ ++ L + + G Q D + +V + V+ + LK
Sbjct: 62 DYGNFRRFVDRSLLSREGRVLQTL-FLKLG-----RQCSYDDIAIWVGI-AVKRGLMELK 114
Query: 167 AKTSGSPPVK---LPLSLFNCKSLNKLELK 193
K + S K LP SL+ C++L L+LK
Sbjct: 115 LKYTDSYYPKRSSLPRSLYTCETLVVLKLK 144
>AT3G49040.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:18177676-18179339 FORWARD LENGTH=415
Length = 415
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 53 ESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSK 103
E++DR L E++++HI+S + TK + T VLSKRWR++W +V L F SK
Sbjct: 8 ENEDRISELHEALLVHIMSSLPTKTVVATSVLSKRWRHVWKTVQNLKFVSK 58
>AT1G66290.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:24713306-24714843 REVERSE LENGTH=453
Length = 453
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 84/169 (49%), Gaps = 13/169 (7%)
Query: 39 QASTPQNIENSEAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCL 98
++ +P++ +N E D +LPE++++ +L + TKD I+T VLS +WR +W VP L
Sbjct: 13 RSCSPESSDNGSGDEV-DWISDLPEALIVLVLLNLPTKDVIKTSVLSTKWRNIWRYVPRL 71
Query: 99 NFNSKSFPRLVEFKRFV-LWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHG 157
+ +++ F F+ ++ S+R + K+ R G D D L +++ +
Sbjct: 72 DLDNRHFTEFDSLASFIDRFMRSNRKVNKFKL----RCGSDLDGDVDLATCSWKWIYMA- 126
Query: 158 VEEIRINLKAKTSGSPPVKLPLSLFNCKSLNKLELKGC---HPTNVSSP 203
I+ ++ P V++ ++NC+SL L+L P VS P
Sbjct: 127 ---IKRKVQHIDVTWPGVRIYPEIYNCESLVSLKLSEVTLTKPEFVSLP 172
>AT3G62440.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:23096104-23097726 REVERSE LENGTH=457
Length = 457
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRFV 115
DR NLP+ ++ HI S + ++A T VLSKRW L+ VP L+F+S S FV
Sbjct: 2 DRISNLPDEIICHIGSFLSAREAAFTTVLSKRWHNLFTIVPDLHFDS-SVKDGESLTDFV 60
Query: 116 LWVLSHRDSSCV-KVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEI----RINLKAKTS 170
V++ SS V K+ + + F D + Q+ D E ++I R+ LK +
Sbjct: 61 DRVMALPASSRVNKLSLKWWFDEDTDSAQFDEDTEPEDTEPAQFDQINRSLRVVLKRGVA 120
Query: 171 -------GSPPVKLPLSLFNCKSLNKLEL 192
G LP +F C+++ KL L
Sbjct: 121 DFYLWVHGKQGYTLPFEVFTCETVTKLSL 149
>AT3G59000.2 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21799757-21801536 FORWARD LENGTH=345
Length = 345
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 63/120 (52%), Gaps = 16/120 (13%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSF-------PRL 108
DR +LP+ ++ HILS + TK+A T +LSKRWRYL VP L F+ F P
Sbjct: 2 DRVGSLPDELLSHILSFLTTKEAALTSLLSKRWRYLIAFVPNLAFDDIVFLHPEEGKPER 61
Query: 109 VEFKR----FVLWVLSHRDSSCVKVL-IYYRFGVDYATDQYLLDKVIEYVALHGVEEIRI 163
E ++ FV VL+ + S +K + R GVD +D+ +D I V GV E+ +
Sbjct: 62 DEIRQSFMDFVDRVLALQAESPIKKFSLKCRIGVD--SDR--VDGWISNVLNRGVSELDL 117
>AT1G78750.1 | Symbols: | F-box/RNI-like superfamily protein |
chr1:29613122-29614695 REVERSE LENGTH=458
Length = 458
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 92/197 (46%), Gaps = 30/197 (15%)
Query: 49 SEAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNF-------- 100
++ + D NLPE+++ +L + TKD +++ VLS RWR LW VP N
Sbjct: 11 AKGSREVDWISNLPETLLCQVLFYLPTKDVVKSSVLSSRWRNLWKYVPGFNLSYCDFHVR 70
Query: 101 NSKSFPRLVEFKRFVLWVLSHRDSSCVKVLIYYRFGVDYATDQY------LLDKVIEYVA 154
N+ S+ F RFV + SC++ F ++Y + Y L+ + I V
Sbjct: 71 NTFSYDH-NTFLRFVDSFMGFNSQSCLQ-----SFRLEYDSSGYGEPKLALIRRWINSVV 124
Query: 155 LHGVEEIRINLKAKTSGSPPVKLPLSLFNCKSLNKLELKGCHPTNVSSPHGCRSVEMPHS 214
V+ + + + + ++P +L+ C++L L L G +++SP + V +P
Sbjct: 125 SRKVK--YLGVLDDSCDNYEFEMPPTLYTCETLVYLTLDG---LSLASP---KFVSLPSL 176
Query: 215 EQLSMHPATADNANSLA 231
++L H + A+ +A
Sbjct: 177 KEL--HLSIVKFADHMA 191
>AT3G59160.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21875023-21876641 FORWARD LENGTH=464
Length = 464
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 37/52 (71%)
Query: 54 SQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSF 105
S+D ++LP++++ H+LS + TK+A T +LS+RWRYL VP L F+ ++
Sbjct: 11 SKDMINDLPDALLCHVLSYLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSAY 62
>AT1G32020.1 | Symbols: | F-box family protein |
chr1:11512552-11513067 REVERSE LENGTH=171
Length = 171
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFP 106
DR LP+ +V I+S + KD+I+T VLSKRW ++W+ V L+ + FP
Sbjct: 4 DRISTLPDHLVAKIVSYLGIKDSIKTSVLSKRWEFVWLKVVGLDLKNCDFP 54
>AT3G58900.3 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21773030-21774074 FORWARD LENGTH=314
Length = 314
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKR 113
D F +LP ++ HILS + TK+A T VLSKRWR L+ VP L F+ F E KR
Sbjct: 2 DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKR 59
>AT3G58900.2 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21773030-21774013 FORWARD LENGTH=327
Length = 327
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKR 113
D F +LP ++ HILS + TK+A T VLSKRWR L+ VP L F+ F E KR
Sbjct: 2 DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKR 59
>AT3G58900.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21773030-21774013 FORWARD LENGTH=327
Length = 327
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKR 113
D F +LP ++ HILS + TK+A T VLSKRWR L+ VP L F+ F E KR
Sbjct: 2 DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKR 59
>AT3G58900.4 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21773030-21774620 FORWARD LENGTH=465
Length = 465
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKR 113
D F +LP ++ HILS + TK+A T VLSKRWR L+ VP L F+ F E KR
Sbjct: 2 DLFSSLPNELLYHILSFLSTKEAALTSVLSKRWRNLFAFVPYLEFDDSVFLHPEERKR 59
>AT1G49610.1 | Symbols: | F-box family protein |
chr1:18361679-18363192 REVERSE LENGTH=354
Length = 354
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 53 ESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFN 101
E D +LP+ ++ LSL+ TK AIRT VLSKRWR++W P L+F+
Sbjct: 23 EDVDSISSLPDVILQENLSLIPTKFAIRTSVLSKRWRHVWSETPSLDFD 71
>AT5G44940.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:18149369-18150892 FORWARD LENGTH=377
Length = 377
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 53 ESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFP 106
E D P+ ++ IL + TKD+++T VLSKRWR LW++VP L + FP
Sbjct: 2 EEFDYISEFPDCLLTQILLNLPTKDSVKTSVLSKRWRNLWLNVPGLRLRTFDFP 55
>AT4G26340.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:13324130-13325559
FORWARD LENGTH=419
Length = 419
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 83/180 (46%), Gaps = 12/180 (6%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNF-NSKSFPRLVEFKRF 114
DR L + ++L ILS + KD + T +LSKRW+ LWM V L + +S F +F
Sbjct: 2 DRISQLSDDLLLQILSFIPGKDVVATSLLSKRWQSLWMLVSELEYDDSYHTGDYKSFSQF 61
Query: 115 VLWVLSHRDSSCVKVLIYYRFGVDY-ATDQYLLDKVIEYVALHGVEEIRINLKAKTSGSP 173
V L ++ +K L + G D A D L I + + +++IN++ +S
Sbjct: 62 VYRSLLSNNAPVIKHL-HLNLGPDCPAIDIGLW---IGFALTRRLRQLKINIRT-SSNDA 116
Query: 174 PVKLPLSLFNCKSLNKLELKGCHPTNVSSPHGCRSVEMPHSEQLSMHPATADNANSLASL 233
LP SL+ +L L L +V S SV +P + L + ++ SL SL
Sbjct: 117 SFSLPSSLYTSDTLETLRLINFVLLDVPS-----SVCLPSLKVLHLKTVDYEDDASLPSL 171
>AT5G38390.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:15366432-15368053 FORWARD LENGTH=456
Length = 456
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRFV 115
D NLP ++ HILS + TK+A T VLSKRWR L VP ++ L F FV
Sbjct: 2 DLLSNLPYELLCHILSFLTTKEAALTSVLSKRWRNLIAFVPNVDIVDHDIREL--FMDFV 59
Query: 116 LWVLSHRDSSCVKVLIYYRFGVD-YATDQYLLDKVIEYVALHGVEEIRINLKAKTSGSPP 174
VL+ + +S + +F +D D +D I+ V + GV E+ +++ +
Sbjct: 60 DRVLALQGNSPIN-----KFSLDCSGVDSDRVDCWIQNVMVRGVSELNLSIFVDSVFEDD 114
Query: 175 VKLPLSLFNCKSLNKLEL 192
L +F K L KL L
Sbjct: 115 YNLFPKVFENKKLVKLGL 132
>AT5G02700.1 | Symbols: | F-box/RNI-like superfamily protein |
chr5:609381-611679 REVERSE LENGTH=456
Length = 456
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 53 ESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSK 103
+ D + +P+ ++ HILS + T A+RT VLS+RWR++W PCL+ K
Sbjct: 24 DGADFINYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVWCETPCLDITLK 74
>AT3G59230.1 | Symbols: | RNI-like superfamily protein |
chr3:21896052-21897787 REVERSE LENGTH=491
Length = 491
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 35/47 (74%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFN 101
+D ++LPE+++ HILS + TK+A T +LS++WRY + VP L+F+
Sbjct: 11 KDIINSLPEALIYHILSFLSTKEAAITSLLSRKWRYFFAFVPNLDFD 57
>AT3G28410.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:10640152-10642071 REVERSE LENGTH=465
Length = 465
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 53 ESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSK 103
+ D + +P+ ++ HILS + T A+RT VLS+RWR++W PCL+ K
Sbjct: 25 DGADFINYMPDDILHHILSFIPTDLAMRTSVLSRRWRHVWCETPCLDIKLK 75
>AT1G67390.1 | Symbols: | F-box family protein |
chr1:25244690-25247139 FORWARD LENGTH=479
Length = 479
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFN 101
DR LP+ V++ IL+ + T+DA++T VLS RW+ +W VP L+F+
Sbjct: 41 DRISKLPDDVLVMILASLSTEDALKTSVLSTRWKNVWKQVPYLHFD 86
>AT5G18770.1 | Symbols: | F-box/FBD-like domains containing protein
| chr5:6261426-6263172 FORWARD LENGTH=481
Length = 481
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 49 SEAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFP 106
+E +D LP+ ++ HIL + T +++ T VLS RWR LW VP L+ N+ FP
Sbjct: 17 TEFWRGEDMISALPDHLLCHILIFLSTDESVLTSVLSSRWRNLWKWVPRLDLNTSDFP 74
>AT4G26350.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr4:13326853-13328315
FORWARD LENGTH=431
Length = 431
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 11/149 (7%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRL-VEFKRF 114
D P+ ++L ILS + TKD I T +LSKRW LW VP L ++ F R + F +F
Sbjct: 2 DIISQCPDHLLLRILSFIPTKDVIVTSLLSKRWGSLWRWVPKLEYD---FTRQNMRFVKF 58
Query: 115 VLWVLSHRDSSCVKVLIYYRFGVDYATDQYL-LDKVIEYVALHGVEEIRINLKAKTSGSP 173
V L ++ ++ L + + + YA + + + I+ V E+ I++
Sbjct: 59 VYRSLLQNNAPVLESL-HLKNIILYAECRTVDIGGWIDIAVSRRVRELEISINC---SDE 114
Query: 174 PVKLPLSLFNCKSLNK--LELKGCHPTNV 200
+LP SL+ C +L L +K CH +V
Sbjct: 115 KFRLPSSLYTCGTLESFILTIKHCHLVDV 143
>AT5G44960.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:18153852-18155391
FORWARD LENGTH=416
Length = 416
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 53 ESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSF 105
E D + LP+S++ IL + TKD+++T V SKRWR LW++VP L+ S F
Sbjct: 2 EECDYINELPDSLLTQILLDLRTKDSVKTSVSSKRWRNLWLNVPGLDLFSLQF 54
>AT4G14096.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8124606-8126202 FORWARD LENGTH=468
Length = 468
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSF 105
+D +LPE++ HILS + TK+A T VLSK+WRYL+ VP L+ + +
Sbjct: 7 RDIISSLPEAISCHILSFLPTKEAASTSVLSKKWRYLFAFVPNLDLDESVY 57
>AT5G56810.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:22974520-22975992
FORWARD LENGTH=435
Length = 435
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 50 EAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKS 104
E S DR LP ++ ILSL+ DA+ T +LSKRW+ +W +P L +N S
Sbjct: 9 EDVTSPDRISQLPNDLLFRILSLIPVSDAMSTSLLSKRWKSVWKMLPTLVYNENS 63
>AT2G39415.1 | Symbols: | F-box family protein |
chr2:16458607-16458966 REVERSE LENGTH=119
Length = 119
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 50 EAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFN 101
+A+E+ D +LP+ ++ ILS + T AIRT VLS RWR++W P + F+
Sbjct: 32 DASENIDSISSLPDVILQQILSSLPTNLAIRTSVLSTRWRHVWSDTPYIYFD 83
>AT3G59170.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21878167-21879799 FORWARD LENGTH=473
Length = 473
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 54 SQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSF 105
S+D + LP++++ HILS + TK+A T +LS+RWRYL VP L F+ +
Sbjct: 5 SKDMINVLPDALLCHILSFLTTKEAASTSLLSRRWRYLLAFVPNLEFDDSVY 56
>AT1G56400.1 | Symbols: | F-box family protein |
chr1:21111805-21113621 REVERSE LENGTH=479
Length = 479
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 22/160 (13%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSF--------- 105
QDR NLP+ +++ I+S + K+ IRT VL+KRWRYL ++F +
Sbjct: 12 QDRLSNLPDVLLIMIISCLSFKECIRTSVLAKRWRYLCRETRNISFKETEYVDHFVSDKR 71
Query: 106 PRLVEFKRFVL-WVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRIN 164
+ V F ++ WV + + IY+ D+ ++ +IE+ V+ + ++
Sbjct: 72 SKRVSFAAYMCQWVSRYHGRYIETLEIYFSIPSDFLA---AVESLIEFAVSRQVKNLVLD 128
Query: 165 LKAKTSGSPP---------VKLPLSLFNCKSLNKLELKGC 195
+ S V+LP+ +++ +L L++ C
Sbjct: 129 FSDPSWISTSCASRYDYVCVQLPVCVYSLTTLESLKIYSC 168
>AT3G44060.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:15824938-15826391 REVERSE LENGTH=427
Length = 427
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 9/140 (6%)
Query: 58 FDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPR----LVEFKR 113
D LP+ +++ IL L+ TK+A+ T VLSKRWR L+ L+F+ R L F
Sbjct: 1 MDCLPDDLLVQILYLLPTKEAVSTSVLSKRWRTLFTRSDNLDFHDPISGRPEDILKSFND 60
Query: 114 FVLWVLSHRDSSCVKVLIYYRFGVDYATDQY-LLDKVIEYVALHGVEEIRINLKAKTSGS 172
FV L+ + +K + T +Y +LD+ I HGV E+ ++L + S
Sbjct: 61 FVDSSLAFQGGKHIK---KFSLHTKIKTFEYHVLDRWICNALEHGVSELHLHLMHE-SWP 116
Query: 173 PPVKLPLSLFNCKSLNKLEL 192
+P +FN +L KL L
Sbjct: 117 WLFSIPSKVFNSSTLVKLSL 136
>AT3G59190.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21884740-21886101 FORWARD LENGTH=388
Length = 388
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 20/153 (13%)
Query: 54 SQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPR------ 107
S+D NLP++++ H+LS + T +A T VL+KRWR+L VP L+ ++ + R
Sbjct: 10 SKDIISNLPDALLCHVLSFLPTTEAASTSVLAKRWRFLLAFVPNLDLDNMIYDRPKMGRR 69
Query: 108 -----LVEFKRFVLWVLSHRDSSCVKVL-IYYRFGVDYATDQYLLDKVIEYVALHGVEEI 161
FK FV V++ + ++ +K + + G D + + KV++ GVEE+
Sbjct: 70 KRLELRKSFKLFVDRVMALQGNAPLKKFSLRCKIGSDPSRVNGWVLKVLD----RGVEEL 125
Query: 162 RINLKAKTSGSPPVKLPLSLFNCKSLNKLELKG 194
+ + ++ P K+ ++ K+L L++ G
Sbjct: 126 DLYIASEYEYPLPPKVLMT----KTLVSLKVSG 154
>AT1G60410.1 | Symbols: | F-box family protein |
chr1:22259129-22260526 FORWARD LENGTH=406
Length = 406
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRF 114
+DR +LP ++ ILS + TK+++RT VLS RW LW V L+ + + F + F
Sbjct: 9 KDRLSDLPCHLLCRILSNLSTKESVRTSVLSPRWSNLWSLVSVLDLDFQDFKGEHDMGEF 68
Query: 115 VLWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEY---VALHGVEEIRINLKAKTSG 171
+ + + + +K+ F + Y +++L + + V GV ++ I
Sbjct: 69 IDSFMEYHEELGLKL---KSFNMFYDANEHLHEPFVRRLNKVVRRGVCDLNIQNMVDVDV 125
Query: 172 SPPVKLPLSLFNCKSLNKLELKGC---HPTNVSSPHGCRSVEMPHSEQLSMHPATADNAN 228
+ V++P SL++C +L L L HP + +SV +P +++ D +
Sbjct: 126 A-LVRMPPSLYSCATLVNLILYCVVFDHPRS-------KSVSLPSVKKMYFEGVKFDGDS 177
Query: 229 SLASL 233
L +L
Sbjct: 178 VLETL 182
>AT4G22280.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:11776054-11777517 REVERSE LENGTH=415
Length = 415
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRF 114
DR + L + ++ HILSL+ K+A T VLS RWRYL+ P L + + F F
Sbjct: 1 MDRINGLSDDIICHILSLLSFKEATSTSVLSMRWRYLFAFRPNLCLDDQEVGGGDSFIDF 60
Query: 115 VLWVLSHRDSSCV-KVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAKTSGSP 173
V VL + + ++ I R +D + V+E HGV + I++ ++
Sbjct: 61 VDRVLVVTGNFPIRRISIKCRMSIDTGHVTRWMVDVLE----HGVSYLDIDIISEDDIG- 115
Query: 174 PVKLPLSLFNCKSLNKLEL-KGCH---PTNVSSP 203
+PL +F CK+L +L+L +G + P VS P
Sbjct: 116 --FVPLEIFTCKTLVELKLARGFYAMVPDYVSLP 147
>AT4G22280.2 | Symbols: | F-box/RNI-like superfamily protein |
chr4:11776368-11777517 REVERSE LENGTH=332
Length = 332
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 12/154 (7%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRF 114
DR + L + ++ HILSL+ K+A T VLS RWRYL+ P L + + F F
Sbjct: 1 MDRINGLSDDIICHILSLLSFKEATSTSVLSMRWRYLFAFRPNLCLDDQEVGGGDSFIDF 60
Query: 115 VLWVLSHRDSSCV-KVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAKTSGSP 173
V VL + + ++ I R +D + V+E HGV + I++ ++
Sbjct: 61 VDRVLVVTGNFPIRRISIKCRMSIDTGHVTRWMVDVLE----HGVSYLDIDIISEDDIG- 115
Query: 174 PVKLPLSLFNCKSLNKLEL-KGCH---PTNVSSP 203
+PL +F CK+L +L+L +G + P VS P
Sbjct: 116 --FVPLEIFTCKTLVELKLARGFYAMVPDYVSLP 147
>AT4G13960.1 | Symbols: | F-box/RNI-like superfamily protein |
chr4:8060681-8062231 REVERSE LENGTH=434
Length = 434
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 16/118 (13%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVE----- 110
D +LP+ V+ HILS + TK+A T +LSKRWR L+ VP L+ + F E
Sbjct: 2 DHVSSLPDEVLYHILSFLTTKEAALTSILSKRWRNLFTFVPNLDIDDSVFLHPQEGKEDR 61
Query: 111 ------FKRFVLWVLSHRDSSCVKVL-IYYRFGVDYATDQYLLDKVIEYVALHGVEEI 161
F +FV VL+ + +S +K L + R G D + +D I GV E+
Sbjct: 62 YEIQKSFMKFVDRVLALQGNSPIKKLSLKLRTGF----DSHRVDGWISNALARGVTEL 115
>AT3G52680.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19527075-19528838
FORWARD LENGTH=456
Length = 456
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 71/173 (41%), Gaps = 26/173 (15%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRF 114
+DR LP+ ++L ILS + T + T VLSK+WR LW VP L F+S + E F
Sbjct: 20 KDRISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFDSDDYES--EHYTF 77
Query: 115 VLWVLSHRDSSCVKVLIYYRFG------------VDYATDQYLLDKVIEYVALHGVEEIR 162
V S VL +R V A ++L + V+++
Sbjct: 78 SEIVCKSFLSHKAPVLESFRLKFVNFNPVDIGLWVGIAFSRHLRELVLDFYP-------- 129
Query: 163 INLKAKTSGSPPVKLPLSLFNCKSLNKLELKGCHPTNVSSPHGCRSVEMPHSE 215
A+ P SL C +L L+L C ++ SP +S+ H E
Sbjct: 130 ----AELGKGVTFTFPSSLCTCNTLETLKLVLCILVDIPSPVLMKSLRTLHLE 178
>AT3G52680.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr3:19527075-19528838
FORWARD LENGTH=456
Length = 456
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 71/173 (41%), Gaps = 26/173 (15%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRF 114
+DR LP+ ++L ILS + T + T VLSK+WR LW VP L F+S + E F
Sbjct: 20 KDRISELPDGLLLKILSSLPTNIVVATSVLSKQWRSLWKLVPNLEFDSDDYES--EHYTF 77
Query: 115 VLWVLSHRDSSCVKVLIYYRFG------------VDYATDQYLLDKVIEYVALHGVEEIR 162
V S VL +R V A ++L + V+++
Sbjct: 78 SEIVCKSFLSHKAPVLESFRLKFVNFNPVDIGLWVGIAFSRHLRELVLDFYP-------- 129
Query: 163 INLKAKTSGSPPVKLPLSLFNCKSLNKLELKGCHPTNVSSPHGCRSVEMPHSE 215
A+ P SL C +L L+L C ++ SP +S+ H E
Sbjct: 130 ----AELGKGVTFTFPSSLCTCNTLETLKLVLCILVDIPSPVLMKSLRTLHLE 178
>AT5G44490.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein |
chr5:17924035-17925843 FORWARD LENGTH=455
Length = 455
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 3/150 (2%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRF 114
+D L ++++ +L + TK+A+ T VLS RW+ +W+ +P L+ NS +FP F F
Sbjct: 16 EDLMSKLTDALISQVLFYLPTKEAVSTSVLSSRWKSVWLLIPDLDLNSSAFPSNNAFVGF 75
Query: 115 V--LWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAKTSGS 172
+ S ++SC+ L ++ + + I +VA H ++ + +
Sbjct: 76 IDKFIDFSKIENSCLHKLKLSIRKEHENDNKSCVTRWIGFVATHKLKHLDVECLLWKKKC 135
Query: 173 PPVKLPLSLFNCKSLNKLELKGCHPTNVSS 202
V +PL+L+ ++L L L NV S
Sbjct: 136 LEV-MPLTLYITQTLFYLRLHRVLLGNVES 164
>AT3G59150.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21872729-21874422 FORWARD LENGTH=509
Length = 509
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 84/188 (44%), Gaps = 25/188 (13%)
Query: 37 KLQASTPQNIENS----EAAESQ-----DRFDNLPESVVLHILSLMETKDAIRTCVLSKR 87
++Q S Q EN EA + D NLP ++ ILS + TK+A T +LSKR
Sbjct: 19 RIQLSISQGFENPNLSMEANKKAKPSYGDVISNLPNDLLCRILSYLSTKEAALTSILSKR 78
Query: 88 WRYLWMSVPCLNFN-------SKSFPRLVEFKRFVLWVLSHRDSSCVKVLIYYRFGVDYA 140
W L +S+P L+F+ K + V FK FV +LS R + V R +
Sbjct: 79 WSNLLLSIPILDFDDSVLLKPQKGQRKNVFFKAFVDRLLSQRVETSSHV---QRVSLKCR 135
Query: 141 TDQYLLDKVIEYVALHGVEEIRINLKAKTSGSPPVKLPLSLFNCKSLNKLELKGC----- 195
D VI+++ L V ++ + + LP ++F K+L KL +
Sbjct: 136 QGGVEPDCVIKWI-LTTVRDLGVLDLSLCIDFGIFHLPFNVFRSKTLVKLRIGTMIRLSQ 194
Query: 196 HPTNVSSP 203
P++V SP
Sbjct: 195 FPSDVVSP 202
>AT3G58920.1 | Symbols: | F-box/RNI-like superfamily protein |
chr3:21776293-21777988 FORWARD LENGTH=470
Length = 470
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 18/150 (12%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNS--KSFPRLVEFKR 113
DR NLP ++ HI+S + K+A VLSKRW+ L+ V L F+ K+ L++F
Sbjct: 2 DRISNLPNEIICHIVSFLSAKEAAFASVLSKRWQNLFTIVQKLEFDDSVKNQGSLMDFVN 61
Query: 114 FVLWV--------LSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINL 165
VL + S R S +K + +++++ + V GV ++L
Sbjct: 62 GVLALPVTTRISKFSLRFDSFLK----RKLETGLVIGPHVVNRCLCNVLKRGV----LDL 113
Query: 166 KAKTSGSPPVKLPLSLFNCKSLNKLELKGC 195
K + G LP +F CK++ L+L C
Sbjct: 114 KLEIYGEDGYLLPSEVFTCKTIVDLKLTSC 143
>AT3G44810.1 | Symbols: | F-box family protein |
chr3:16358496-16359983 REVERSE LENGTH=448
Length = 448
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 20/145 (13%)
Query: 61 LPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSK--SFPRLVE-------- 110
LP+ +++H+LS +ETK A T VLSKRWR L+ L+F+ S P + E
Sbjct: 12 LPDELLVHVLSSLETKQAASTSVLSKRWRTLFAVRRNLDFDDSIISHPEVGEQNMDDVQE 71
Query: 111 -FKRFVLWVLSHRDSSCVKVLIYYRFGVDYAT--DQYLLDKVIEYVALHGVEEIRINLKA 167
F+ FV L+ + S + +F + Y D +D+ I HGV E+ + L +
Sbjct: 72 SFRDFVDKRLAFQGSVPIN-----KFSLIYGDKHDDVRVDRWINTALEHGVSELHLCLTS 126
Query: 168 KTSGSPPVKLPLSLFNCKSLNKLEL 192
T + P ++F +L KL L
Sbjct: 127 VTRRLH--RFPSNVFRSTTLVKLTL 149
>AT5G38590.2 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:15452066-15453455
REVERSE LENGTH=410
Length = 410
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 72/149 (48%), Gaps = 8/149 (5%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSK--SFPRLVEFKR 113
D+ + LP+ +++ ILS + T A+ T +LSKRW +LWM +P L++ S+ P V +
Sbjct: 2 DKINGLPDDLLVKILSYVPTDIAVSTSILSKRWEFLWMWLPNLDYTSRWCRKPGDVGLRD 61
Query: 114 FVLWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAKTSGSP 173
F+ L + ++ L ++ D + + + IE V ++ I+ ++
Sbjct: 62 FIHKNLPLHRAPVIESLRFHSNSPDIKPED--IRRWIEIAVSRHVHDLDIDHFSENENI- 118
Query: 174 PVKLPLSLFNCKSLNKLELKGCHPTNVSS 202
S F CKSL L+L+ ++ S
Sbjct: 119 ---FLSSFFACKSLVTLKLRSVTLRDIPS 144
>AT5G22730.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:7551632-7553219
REVERSE LENGTH=466
Length = 466
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 38/68 (55%)
Query: 38 LQASTPQNIENSEAAESQDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPC 97
++A + + + +D LP+S++ IL + KD +RT LS RW+ LW+ +P
Sbjct: 10 MKAKYGERSQGTYFMAGEDLISKLPDSLITQILLYLPIKDIVRTSSLSSRWKSLWLLIPR 69
Query: 98 LNFNSKSF 105
L+ +S+ F
Sbjct: 70 LDLDSEEF 77
>AT5G38590.1 | Symbols: | F-box/RNI-like/FBD-like
domains-containing protein | chr5:15452586-15453455
REVERSE LENGTH=289
Length = 289
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSK 103
D+ + LP+ +++ ILS + T A+ T +LSKRW +LWM +P L++ S+
Sbjct: 1 MDKINGLPDDLLVKILSYVPTDIAVSTSILSKRWEFLWMWLPNLDYTSR 49
>AT5G22660.2 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein | chr5:7536328-7537853
REVERSE LENGTH=450
Length = 450
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRF 114
+DR +LP+ ++ ILS + T++A+ T +LS RW+ LW+S P L+ + +F F F
Sbjct: 12 EDRISSLPDHLLSQILSNLPTENAVTTSILSTRWKDLWLSTPVLDIDIDAFDDATTFISF 71
Query: 115 VLWVL-SHRDSSCVKVLIYYRF-GVDYATDQYLLDKVIEYVALHGVEEIRINLKAKTSGS 172
L S +DS K+ I ++ VD T ++ ++ H + RI+ T
Sbjct: 72 ATRFLDSFKDSCLHKLQISFQMEAVDMWTIIPWIEDAVKRRIQHLEVDSRIDHMIDT--- 128
Query: 173 PPVKLPLSLFNCKSLNKLEL 192
LPL+++ +SL L L
Sbjct: 129 ----LPLTVYLSESLVSLRL 144
>AT5G22660.1 | Symbols: | FBD, F-box, Skp2-like and Leucine Rich
Repeat domains containing protein | chr5:7536906-7537853
REVERSE LENGTH=315
Length = 315
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 7/139 (5%)
Query: 55 QDRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRF 114
+DR +LP+ ++ ILS + T++A+ T +LS RW+ LW+S P L+ + +F F F
Sbjct: 12 EDRISSLPDHLLSQILSNLPTENAVTTSILSTRWKDLWLSTPVLDIDIDAFDDATTFISF 71
Query: 115 VLWVL-SHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAKTSGSP 173
L S +DS K+ I ++ A D + + IE ++ + ++ +
Sbjct: 72 ATRFLDSFKDSCLHKLQISFQME---AVDMWTIIPWIEDAVKRRIQHLEVDSRIDHMIDT 128
Query: 174 PVKLPLSLFNCKSLNKLEL 192
LPL+++ +SL L L
Sbjct: 129 ---LPLTVYLSESLVSLRL 144
>AT1G55030.1 | Symbols: | RNI-like superfamily protein |
chr1:20530417-20531768 REVERSE LENGTH=422
Length = 422
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 68/143 (47%), Gaps = 19/143 (13%)
Query: 56 DRFDNLPESVVLHILSLMETKDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEFKRFV 115
D LPE ++L IL + TK AI T VLSK+W+ W +P L F+ SF R ++ +
Sbjct: 9 DMISQLPEPLILQILGSLPTKVAITTSVLSKQWQSHWKMMPKLEFD--SFLRRLDLENVT 66
Query: 116 LWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAKT------ 169
+LSH K + F + D+ + ++ L G+ R N++
Sbjct: 67 KCLLSH------KAPVLQTFSLKVRLDRR--NNAVDIGCLIGIAMTR-NVRKLVLEVYFH 117
Query: 170 SGSPPVKLPLSLFNCKSLNKLEL 192
G+ P SL++C++L LEL
Sbjct: 118 RGT--FTFPRSLYHCETLETLEL 138
>AT5G56560.1 | Symbols: | FBD, F-box and Leucine Rich Repeat
domains containing protein | chr5:22899724-22901985
FORWARD LENGTH=607
Length = 607
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 7/141 (4%)
Query: 53 ESQDRFDNLPESVVLHILSLMET-KDAIRTCVLSKRWRYLWMSVPCLNFNSKSFPRLVEF 111
E Q R +LP+ ++L ILS + K + T ++S+RW+ W VP + F+ P F
Sbjct: 2 EKQTRLSDLPDELLLKILSALPMFKVTLATRLISRRWKGPWKLVPDVTFDDDDIP-FKSF 60
Query: 112 KRFVLWVLSHRDSSCVKVLIYYRFGVDYATDQYLLDKVIEYVALHGVEEIRINLKAKTSG 171
+ F+ +V S+ ++L ++ ++ ++ V E+RI+L KT
Sbjct: 61 ETFMSFVYGSFLSNDAQILDRLHLKLNQKYSASDINFWVQVAVNRSVRELRIDLFGKT-- 118
Query: 172 SPPVKLPLSLFNCKSLNKLEL 192
++LP L +C +L +L L
Sbjct: 119 ---LELPCCLCSCITLKELTL 136