Miyakogusa Predicted Gene
- Lj3g3v0312100.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0312100.1 Non Chatacterized Hit- tr|I1MQQ2|I1MQQ2_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,80.25,0,seg,NULL; PPR: pentatricopeptide repeat
domain,Pentatricopeptide repeat; PPR,Pentatricopeptide
repea,CUFF.40492.1
(725 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 675 0.0
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 409 e-114
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 401 e-112
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 390 e-108
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 383 e-106
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 375 e-104
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 374 e-103
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 369 e-102
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 366 e-101
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 364 e-100
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 359 3e-99
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 351 8e-97
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 351 1e-96
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 349 3e-96
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 347 2e-95
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 346 3e-95
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 345 6e-95
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 345 1e-94
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 343 3e-94
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 343 4e-94
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 4e-94
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 342 5e-94
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 340 2e-93
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 338 8e-93
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 338 9e-93
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 1e-92
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 2e-92
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 2e-92
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 336 3e-92
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 336 4e-92
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 336 4e-92
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 335 1e-91
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 334 1e-91
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 330 3e-90
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 330 3e-90
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 8e-90
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 1e-89
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 326 3e-89
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 326 5e-89
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 325 5e-89
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 324 1e-88
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 324 1e-88
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 323 2e-88
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 323 3e-88
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 323 3e-88
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 7e-88
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 322 7e-88
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 1e-87
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 1e-87
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 320 2e-87
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 319 4e-87
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 8e-87
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 315 5e-86
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 1e-85
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 315 1e-85
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 2e-85
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 1e-84
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 2e-84
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 310 2e-84
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 309 5e-84
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 308 1e-83
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 307 2e-83
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 3e-83
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 306 3e-83
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 4e-83
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 5e-83
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 305 7e-83
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 304 1e-82
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 304 1e-82
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 303 2e-82
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 302 5e-82
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 302 6e-82
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 302 7e-82
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 300 2e-81
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 300 3e-81
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 6e-81
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 299 6e-81
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 6e-81
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 1e-80
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 298 1e-80
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 296 4e-80
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 8e-80
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 295 1e-79
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 293 4e-79
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 292 5e-79
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 6e-79
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 6e-79
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 292 7e-79
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 292 7e-79
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 9e-79
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 1e-78
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 291 1e-78
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 290 2e-78
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 290 2e-78
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 3e-78
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 290 3e-78
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 3e-78
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 289 4e-78
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 289 5e-78
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 288 9e-78
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 288 9e-78
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 1e-77
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 287 2e-77
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 287 2e-77
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 4e-77
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 286 4e-77
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 1e-76
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 2e-76
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 2e-76
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 4e-76
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 283 4e-76
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 282 5e-76
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 282 5e-76
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 8e-76
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 281 1e-75
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 1e-75
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 281 1e-75
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 2e-75
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 281 2e-75
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 280 3e-75
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 277 2e-74
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 3e-74
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 276 4e-74
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 4e-74
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 4e-74
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 275 9e-74
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 274 1e-73
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 3e-73
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 273 4e-73
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 272 6e-73
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 272 6e-73
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 272 7e-73
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 271 1e-72
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 268 1e-71
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 267 2e-71
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 266 5e-71
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 264 2e-70
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 264 2e-70
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 263 4e-70
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 262 8e-70
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 4e-69
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 5e-69
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 259 6e-69
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 258 1e-68
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 257 2e-68
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 3e-68
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 256 4e-68
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 255 7e-68
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 2e-67
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 3e-67
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 251 9e-67
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 3e-66
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 4e-66
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 249 5e-66
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 1e-65
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 248 1e-65
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 246 3e-65
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 246 4e-65
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 8e-65
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 243 4e-64
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 243 5e-64
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 6e-64
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 8e-64
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 241 1e-63
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 4e-63
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 237 2e-62
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 3e-62
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 236 4e-62
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 235 8e-62
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 7e-60
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 4e-59
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 5e-59
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 223 5e-58
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 6e-58
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 7e-58
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 8e-58
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 1e-56
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 2e-56
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 2e-56
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 4e-56
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 214 1e-55
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 213 3e-55
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 1e-54
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 4e-54
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 8e-54
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 8e-52
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 192 8e-49
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 7e-46
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 178 1e-44
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 123 5e-28
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 119 7e-27
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 118 2e-26
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 118 2e-26
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 4e-26
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 6e-26
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 1e-25
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 3e-25
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 3e-25
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 5e-25
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 2e-24
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 109 6e-24
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 7e-24
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 9e-23
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 1e-22
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 3e-22
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 102 7e-22
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 9e-22
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 102 9e-22
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 2e-21
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 4e-21
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 5e-21
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 5e-21
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 100 5e-21
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 7e-21
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 99 7e-21
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 8e-21
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 1e-20
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 98 2e-20
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 97 4e-20
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 4e-20
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 4e-20
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 97 4e-20
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 5e-20
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 7e-20
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 9e-20
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 1e-19
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 96 1e-19
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 95 2e-19
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 6e-19
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 92 1e-18
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 92 2e-18
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 2e-18
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 2e-18
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 91 2e-18
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 3e-18
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 91 3e-18
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 4e-18
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 5e-18
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 6e-18
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 1e-17
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 88 3e-17
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 5e-17
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 7e-17
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 86 9e-17
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 84 4e-16
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 4e-16
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 4e-16
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 5e-16
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 7e-16
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 8e-16
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 5e-15
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 7e-15
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 7e-15
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 79 8e-15
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 79 1e-14
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 78 2e-14
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 78 2e-14
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 5e-14
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 5e-14
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 6e-14
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 9e-14
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 9e-14
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 75 2e-13
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 2e-13
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 75 2e-13
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 2e-13
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 6e-13
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 7e-13
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 73 7e-13
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 73 7e-13
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 72 1e-12
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 3e-12
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 3e-12
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 7e-12
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 70 7e-12
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 8e-12
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 69 1e-11
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 69 1e-11
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-11
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 2e-11
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 2e-11
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 68 2e-11
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 4e-11
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 5e-11
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 6e-11
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 6e-11
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 7e-11
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 1e-10
AT1G77150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 65 2e-10
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 2e-10
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 3e-10
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 4e-10
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 6e-10
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 8e-10
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 9e-10
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 2e-09
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 61 3e-09
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 7e-09
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 59 1e-08
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 2e-08
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 59 2e-08
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 2e-08
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 58 2e-08
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 4e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 6e-08
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 57 7e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 1e-07
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 5e-07
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 5e-07
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 7e-07
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 1e-06
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 2e-06
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 2e-06
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 51 3e-06
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 6e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 50 7e-06
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 675 bits (1742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/654 (50%), Positives = 455/654 (69%), Gaps = 2/654 (0%)
Query: 46 FFITLLQQCSTLQQARQLHSQTILTA-AYRKPFLAAKLIALYARFGSVSHAQKVFNAVPF 104
+F LL C T QQ RQ+H+Q +L+ +R LAA LI++YAR G + A+ VF V
Sbjct: 58 YFDHLLGLCLTAQQCRQVHAQVLLSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSL 117
Query: 105 ERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLC 164
L + LWNSI++ANVSHG +E A+E+Y GMR+ G DG+ LPLI+ AC +LG LC
Sbjct: 118 VLLSDLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLC 177
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
R H +++G + +LHVVN+L+ +Y K GRM DA LF MPVR +SWN M+ G++
Sbjct: 178 RAFHTQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQE 237
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
+DC A +IF+ M+ E+++P+ VTWTS+LS H +CG +++ L+ F LMR G +S EAL
Sbjct: 238 YDCESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEAL 297
Query: 285 AVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN 344
AV SVCA++ + + ++HGYVIKGG+E+YL +NALI Y K + DA ++F I+N
Sbjct: 298 AVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRN 357
Query: 345 KNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGE 404
K +ESWN+LI+S+ ++G +EA ++ +LE+ ++ ++ NV++W++VI G +G G+
Sbjct: 358 KGIESWNSLITSFVDAGKLDEALSLFSELEE-MNHVCNVKANVVTWTSVIKGCNVQGRGD 416
Query: 405 ESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLI 464
+SLE FR+MQ +KV N VT +LS+CAEL ALNLGRE+HG+ +R M +NILV N L+
Sbjct: 417 DSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALV 476
Query: 465 NMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHV 524
NMY KCG +G LVF+ I +DLISWNS+I GYGMHG + AL+ FD MI +G PD +
Sbjct: 477 NMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGI 536
Query: 525 TFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRN 584
V LSACSHAGLV GR +FY M + F +EP EHYAC+VDLLGR G L+EA++IV+N
Sbjct: 537 ALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKN 596
Query: 585 MPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDS 644
MP+EP + GALLNSCR HK+ I E ASQ+ L + TGS+MLLSNIY+A GRWE+S
Sbjct: 597 MPMEPKVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEES 656
Query: 645 ARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQM 698
A VR AKKK LKK G SWIEV+KK Y FS+G+IV + +Y +LE+L M
Sbjct: 657 ANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYPVLEDLVSHM 710
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 409 bits (1052), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/661 (33%), Positives = 358/661 (54%), Gaps = 8/661 (1%)
Query: 59 QARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIR 118
+ Q H++ + + A +++AKLIA Y+ + + A V ++P I ++S+I
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPT---IYSFSSLIY 89
Query: 119 ANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRN 178
A F +I ++ M G PD LP + + C+ L + + + +HC + G
Sbjct: 90 ALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDM 149
Query: 179 HLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRME 238
V + MY + GRM DA ++FD M + +++ + ++ YA RI ME
Sbjct: 150 DAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEME 209
Query: 239 LEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVD 298
N V+W +LS R G + E + +F+ + G ++ V+ D ++
Sbjct: 210 SSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLN 269
Query: 299 RSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYA 358
R IHGYVIK G V +A+ID Y K H+ ++F + NA I+ +
Sbjct: 270 MGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLS 329
Query: 359 ESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKV 418
+GL ++A + L Q + NV+SW+++I+G A G E+LELFR MQ+A V
Sbjct: 330 RNGLVDKALEMF-----ELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGV 384
Query: 419 KPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHL 478
KPN VT ++L C +AAL GR HG+AVR + DN+ VG+ LI+MY KCG +
Sbjct: 385 KPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQI 444
Query: 479 VFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGL 538
VF+ + ++L+ WNSL++G+ MHG ++ F+ +++ +KPD ++F + LSAC GL
Sbjct: 445 VFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGL 504
Query: 539 VAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALL 598
G F M E+ I+P +EHY+C+V+LLGRAG LQEA D+++ MP EP+ +WGALL
Sbjct: 505 TDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALL 564
Query: 599 NSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKK 658
NSCR + + E A ++ L + G+++LLSNIYAA G W + +R + GLKK
Sbjct: 565 NSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKK 624
Query: 659 TPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENYELNSCFNQECIYDQS 718
PG SWI+V+ +VYT AG+ H +D++ ++E++ +M + N F + +Q
Sbjct: 625 NPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQE 684
Query: 719 E 719
+
Sbjct: 685 Q 685
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 188/425 (44%), Gaps = 38/425 (8%)
Query: 53 QCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERL----- 107
+ S + +Q+H + ++ F+ + +Y R G + A+KVF+ + + +
Sbjct: 128 ELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSA 187
Query: 108 ---------------------------DHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFG 140
+I WN I+ GY + A+ ++ + G
Sbjct: 188 LLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLG 247
Query: 141 FFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDAC 200
F PD T+ ++ + ++ R++H + ++ G V++ ++ MYGK G +
Sbjct: 248 FCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGII 307
Query: 201 QLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCG 260
LF+ + N ++G + N A +F+ + + N V+WTS+++ + G
Sbjct: 308 SLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNG 367
Query: 261 LYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKN 320
E LELF+ M+ G + + + ++ C ++ + R HG+ ++ D + V +
Sbjct: 368 KDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGS 427
Query: 321 ALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGH 380
ALID Y K + + VF + KNL WN+L++ ++ G +E ++ L ++
Sbjct: 428 ALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRT---- 483
Query: 381 QPLRPNVISWSAVISGFASKGCGEESLELFRRM-QLAKVKPNCVTFSTVLSVCAELAALN 439
L+P+ IS+++++S G +E + F+ M + +KP +S ++++ L
Sbjct: 484 -RLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQ 542
Query: 440 LGREL 444
+L
Sbjct: 543 EAYDL 547
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 236/685 (34%), Positives = 360/685 (52%), Gaps = 52/685 (7%)
Query: 46 FFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
F + S+++ H+ +++T F+ L+A+Y+R S+S A+KVF+ +
Sbjct: 132 FVFKACGEISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM--- 188
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGM-RKFGFFPDGFTLPLIIEACSHLGSSSLC 164
+ + WNSII + G + A+E++ M +FG PD TL ++ C+ LG+ SL
Sbjct: 189 SVWDVVSWNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLG 248
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
+ +HC A+ ++ V N LV MY K G M++A +F M V+ ++SWN MV+GY+
Sbjct: 249 KQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQI 308
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
A R+F++M+ E + + VTW++ +S + + GL E L + + M + G + + L
Sbjct: 309 GRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTL 368
Query: 285 AVVISVCADVVEVDRSREIHGYVIK-------GGYEDYLFVKNALIDTYRKHKHLGDAHN 337
V+S CA V + +EIH Y IK G+ D V N LID Y K K + A
Sbjct: 369 ISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARA 428
Query: 338 VFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGF 397
+F D P +V++W+ +I G+
Sbjct: 429 MF--------------------------------------DSLSPKERDVVTWTVMIGGY 450
Query: 398 ASKGCGEESLELFRRM--QLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDD 455
+ G ++LEL M + + +PN T S L CA LAAL +G+++H YA+RN +
Sbjct: 451 SQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNA 510
Query: 456 -NILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEM 514
+ V N LI+MY KCG LVFDN+ ++ ++W SL++GYGMHG G+ AL FDEM
Sbjct: 511 VPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEM 570
Query: 515 IKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGL 574
+ G K D VT + L ACSH+G++ G F +M F + P EHYACLVDLLGRAG
Sbjct: 571 RRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGR 630
Query: 575 LQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNI 634
L A ++ MP+EP +W A L+ CR H ++ E A +I L S GS+ LLSN+
Sbjct: 631 LNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNL 690
Query: 635 YAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEEL 694
YA GRW+D R+R + KG+KK PG SW+E K TF G+ H E+Y +L +
Sbjct: 691 YANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDH 750
Query: 695 ALQMANENYELNSCFNQECIYDQSE 719
++ + Y + F + D+ +
Sbjct: 751 MQRIKDIGYVPETGFALHDVDDEEK 775
Score = 240 bits (612), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 156/567 (27%), Positives = 271/567 (47%), Gaps = 55/567 (9%)
Query: 50 LLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDH 109
+ +C T+ Q + +H Q +L+ L + LI+ Y G +SHA + P
Sbjct: 34 FIHKCKTISQVKLIH-QKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAG- 91
Query: 110 IPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHC 169
+ WNS+IR+ +G + ++ M + PD +T P + +AC + S H
Sbjct: 92 VYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHA 151
Query: 170 HALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVG 229
+L GF +++ V N LV MY + + DA ++FD M V ++SWN+++ YA
Sbjct: 152 LSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYA------- 204
Query: 230 ASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTR-GCEISAEALAVVI 288
+ G LE+F M GC L V+
Sbjct: 205 ----------------------------KLGKPKVALEMFSRMTNEFGCRPDNITLVNVL 236
Query: 289 SVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE 348
CA + +++H + + +FV N L+D Y K + +A+ VF ++ K++
Sbjct: 237 PPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVV 296
Query: 349 SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLE 408
SWNA+++ Y++ G E+A + ++++ + ++ +V++WSA ISG+A +G G E+L
Sbjct: 297 SWNAMVAGYSQIGRFEDAVRLFEKMQE-----EKIKMDVVTWSAAISGYAQRGLGYEALG 351
Query: 409 LFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMD-------DNILVGN 461
+ R+M + +KPN VT +VLS CA + AL G+E+H YA++ +D D +V N
Sbjct: 352 VCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVIN 411
Query: 462 GLINMYMKCGDFKKGHLVFDNI--EGRDLISWNSLISGYGMHGLGDNALTTFDEMIK--A 517
LI+MY KC +FD++ + RD+++W +I GY HG + AL EM +
Sbjct: 412 QLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDC 471
Query: 518 GMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQE 577
+P+ T AL AC+ + G+ + +R + + CL+D+ + G + +
Sbjct: 472 QTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISD 531
Query: 578 ANDIVRNMPIEPNEYIWGALLNSCRTH 604
A + NM + NE W +L+ H
Sbjct: 532 ARLVFDNM-MAKNEVTWTSLMTGYGMH 557
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 390 bits (1001), Expect = e-108, Method: Compositional matrix adjust.
Identities = 226/682 (33%), Positives = 355/682 (52%), Gaps = 53/682 (7%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALY-ARFGS-VSHAQKVFNAVPF 104
FI++L C T Q +QLHSQ+I P KL + +R G VS+A K+F +P
Sbjct: 37 FISILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPE 96
Query: 105 ERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLC 164
+ +WN++I+ + +Y+ M K G PD T P ++ G + C
Sbjct: 97 P---DVVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALAC 153
Query: 165 -RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
+ +HCH ++ G ++L+V N LV MY G M+ A +FD + SWN M+SG
Sbjct: 154 GKKLHCHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISG--- 210
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
+ R Y+E++EL M ++
Sbjct: 211 --------------------------------YNRMKEYEESIELLVEMERNLVSPTSVT 238
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
L +V+S C+ V + D + +H YV + E L ++NAL++ Y + A +F +K
Sbjct: 239 LLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALVNAYAACGEMDIAVRIFRSMK 298
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
+++ SW +++ Y E G L+L ++ P+R + ISW+ +I G+ GC
Sbjct: 299 ARDVISWTSIVKGYVERGN--------LKLARTYFDQMPVR-DRISWTIMIDGYLRAGCF 349
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
ESLE+FR MQ A + P+ T +VL+ CA L +L +G + Y +N + ++++VGN L
Sbjct: 350 NESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNAL 409
Query: 464 INMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDH 523
I+MY KCG +K VF +++ RD +W +++ G +G G A+ F +M ++PD
Sbjct: 410 IDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPDD 469
Query: 524 VTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVR 583
+T++ LSAC+H+G+V R F +M + RIEP++ HY C+VD+LGRAGL++EA +I+R
Sbjct: 470 ITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRAGLVKEAYEILR 529
Query: 584 NMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWED 643
MP+ PN +WGALL + R H D + E A +IL L + LL NIYA RW+D
Sbjct: 530 KMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALLCNIYAGCKRWKD 589
Query: 644 SARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
VR +KKTPG S IEV + F AG+ HL +E+Y+ LEELA + Y
Sbjct: 590 LREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYMKLEELAQESTFAAY 649
Query: 704 ELNSCFNQECIYDQSELVLVAN 725
++ E +++ + VAN
Sbjct: 650 LPDT---SELLFEAGDAYSVAN 668
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 383 bits (983), Expect = e-106, Method: Compositional matrix adjust.
Identities = 219/695 (31%), Positives = 369/695 (53%), Gaps = 69/695 (9%)
Query: 49 TLLQQCSTLQ---QARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
TL++ + ++ QA+QLH+Q I T + A+ +I++Y + A +F +
Sbjct: 10 TLIKNPTRIKSKSQAKQLHAQFIRTQSLSHTS-ASIVISIYTNLKLLHEALLLFKTL--- 65
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCR 165
+ + W S+IR F A+ +V MR G PD P ++++C+ +
Sbjct: 66 KSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGE 125
Query: 166 IVHCHALELGFRNHLHVVNKLVGMYGKL---GRMEDACQLFDGMPVRTILSWNTMVSG-- 220
VH + LG L+ N L+ MY KL G +FD MP RT S + V
Sbjct: 126 SVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAET 185
Query: 221 --YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCE 278
F D V R+F+ M R + V++ ++++ + + G+Y++ L + + M T +
Sbjct: 186 CIMPFGIDSV--RRVFEVMP----RKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLK 239
Query: 279 ISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNV 338
+ L+ V+ + ++ V+V + +EIHGYVI+ G + +++ ++L+D Y K + D+ V
Sbjct: 240 PDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERV 299
Query: 339 FFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFA 398
F + Y G ISW+++++G+
Sbjct: 300 FSRL--------------YCRDG--------------------------ISWNSLVAGYV 319
Query: 399 SKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNIL 458
G E+L LFR+M AKVKP V FS+V+ CA LA L+LG++LHGY +R NI
Sbjct: 320 QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIF 379
Query: 459 VGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAG 518
+ + L++MY KCG+ K +FD + D +SW ++I G+ +HG G A++ F+EM + G
Sbjct: 380 IASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQG 439
Query: 519 MKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEA 578
+KP+ V FV L+ACSH GLV F M + + + +EHYA + DLLGRAG L+EA
Sbjct: 440 VKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEA 499
Query: 579 NDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAAN 638
+ + M +EP +W LL+SC HK+ ++ E+ A +I T++S+ G+++L+ N+YA+N
Sbjct: 500 YNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYASN 559
Query: 639 GRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQM 698
GRW++ A++R+ +KKGL+K P SWIE++ K + F +G+ H +D++ L+ + QM
Sbjct: 560 GRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQM 619
Query: 699 ANENY---------ELNSCFNQECIYDQSELVLVA 724
E Y +++ +E ++ SE + VA
Sbjct: 620 EKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVA 654
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 112/242 (46%), Gaps = 23/242 (9%)
Query: 47 FITLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F +++ C+ TL +QLH + F+A+ L+ +Y++ G++ A+K+F+ +
Sbjct: 346 FSSVIPACAHLATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMN 405
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLG---- 159
LD + W +II + HG+ A+ ++ M++ G P+ ++ ACSH+G
Sbjct: 406 V--LDEVS-WTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDE 462
Query: 160 ----SSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILS-W 214
+S+ ++ G L + + G+ G++E+A M V S W
Sbjct: 463 AWGYFNSMTKV-------YGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVW 515
Query: 215 NTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRT 274
+T++S + + + A ++ +++ D N + + + + G + E +L MR
Sbjct: 516 STLLSSCSVHKNLELAEKVAEKIFTVD-SENMGAYVLMCNMYASNGRWKEMAKLRLRMRK 574
Query: 275 RG 276
+G
Sbjct: 575 KG 576
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 225/698 (32%), Positives = 365/698 (52%), Gaps = 75/698 (10%)
Query: 50 LLQQCSTLQQARQLHS-----QTILTAAYRKPFLAAK---------LIALYARFGSVSHA 95
L ++C+ A HS QT + + KP L I+ Y R G + A
Sbjct: 24 LKRRCNNAHGAANFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEA 83
Query: 96 QKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFA------------------IEIYVGMR 137
+VF +P R + +N +I + +G FE A I+ YV R
Sbjct: 84 LRVFKRMP--RWSSVS-YNGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNR 140
Query: 138 KFGFFPDGFTLPLIIEACS---------HLGSSSLCRIVHCHALELGFRNHLHVVNKLVG 188
G + F + + CS G R V E +N + N L+
Sbjct: 141 NLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPE---KNDVSW-NALLS 196
Query: 189 MYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVT 248
Y + +ME+AC LF ++SWN ++ G+ V A + F M + D V+
Sbjct: 197 AYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRD----VVS 252
Query: 249 WTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVE---VDRSREIHG 305
W ++++ + + G DE +LF E + + ++ + ++ V+ +RE+
Sbjct: 253 WNTIITGYAQSGKIDEARQLFD-------ESPVQDVFTWTAMVSGYIQNRMVEEARELFD 305
Query: 306 YVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEE 365
+ + + NA++ Y + + + A +F + +N+ +WN +I+ YA+ G E
Sbjct: 306 KMPERNEVSW----NAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISE 361
Query: 366 AHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTF 425
A K+L P R + +SW+A+I+G++ G E+L LF +M+ + N +F
Sbjct: 362 A--------KNLFDKMPKR-DPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSF 412
Query: 426 STVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEG 485
S+ LS CA++ AL LG++LHG V+ + VGN L+ MY KCG ++ + +F + G
Sbjct: 413 SSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAG 472
Query: 486 RDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNL 545
+D++SWN++I+GY HG G+ AL F+ M + G+KPD T V LSACSH GLV GR
Sbjct: 473 KDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQY 532
Query: 546 FYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHK 605
FY M +++ + P +HYAC+VDLLGRAGLL++A+++++NMP EP+ IWG LL + R H
Sbjct: 533 FYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHG 592
Query: 606 DTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWI 665
+T++ E A +I + + +G ++LLSN+YA++GRW D ++R+ + KG+KK PG SWI
Sbjct: 593 NTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWI 652
Query: 666 EVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
E++ K +TFS G+ H DE++ LEEL L+M Y
Sbjct: 653 EIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGY 690
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 18/200 (9%)
Query: 47 FITLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F + L C+ L+ +QLH + + F+ L+ +Y + GS+ A +F +
Sbjct: 412 FSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMA 471
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
+ I WN++I HG+ E A+ + M++ G PD T+ ++ ACSH G
Sbjct: 472 GK---DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDK 528
Query: 164 CR-IVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILS-WNTMVSGY 221
R + + G + +V + G+ G +EDA L MP + W T+
Sbjct: 529 GRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTL---- 584
Query: 222 AFNHDCVGASRIFKRMELED 241
+GASR+ EL +
Sbjct: 585 ------LGASRVHGNTELAE 598
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 222/715 (31%), Positives = 370/715 (51%), Gaps = 85/715 (11%)
Query: 47 FITLLQQC--STLQQ--ARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAV 102
F LL C S L R +H+ I + + F+ +LI Y++ GS+ ++VF+ +
Sbjct: 22 FAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKM 81
Query: 103 PFER----------------LDH-------IP-----LWNSIIRANVSHGYFEFAIEIYV 134
P LD +P WNS++ H E A+ +
Sbjct: 82 PQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFA 141
Query: 135 GMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLG 194
M K GF + ++ ++ ACS L + VH + F + +++ + LV MY K G
Sbjct: 142 MMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCG 201
Query: 195 RMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLS 254
+ DA ++FD M R ++SWN++++ + N V A +F+ M P+ VT
Sbjct: 202 NVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVT------ 255
Query: 255 SHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGG-YE 313
LA VIS CA + + +E+HG V+K
Sbjct: 256 -----------------------------LASVISACASLSAIKVGQEVHGRVVKNDKLR 286
Query: 314 DYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQL 373
+ + + NA +D Y K + +A +F + +N+ + ++IS YA + + A + ++
Sbjct: 287 NDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKM 346
Query: 374 EKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCA 433
+ NV+SW+A+I+G+ G EE+L LF ++ V P +F+ +L CA
Sbjct: 347 AER---------NVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACA 397
Query: 434 ELAALNLGREL------HGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRD 487
+LA L+LG + HG+ ++ +D+I VGN LI+MY+KCG ++G+LVF + RD
Sbjct: 398 DLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERD 457
Query: 488 LISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFY 547
+SWN++I G+ +G G+ AL F EM+++G KPDH+T + LSAC HAG V GR+ F
Sbjct: 458 CVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFS 517
Query: 548 QMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDT 607
M R+F + P +HY C+VDLLGRAG L+EA ++ MP++P+ IWG+LL +C+ H++
Sbjct: 518 SMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNI 577
Query: 608 KIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEV 667
+ + A ++L + +G ++LLSN+YA G+WED VR S +K+G+ K PG SWI++
Sbjct: 578 TLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKI 637
Query: 668 RKKVYTFSAGNIVHLGLDEVYVILEELALQMANE--NYELNSCFNQECIYDQSEL 720
+ + F + H +++ +L+ L +M E + E+ S ++E Y + L
Sbjct: 638 QGHDHVFMVKDKSHPRKKQIHSLLDILIAEMRPEQDHTEIGSLSSEEMDYSSNLL 692
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 129/498 (25%), Positives = 235/498 (47%), Gaps = 89/498 (17%)
Query: 142 FPDGFTLPLIIEACSHLGSSSL-CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDAC 200
F D ++++C S++ R VH ++ GF N + + N+L+ Y K G +ED
Sbjct: 16 FTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGR 75
Query: 201 QLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLS---SHK 257
Q+FD MP R I +WN++V+G A +F+ M D TW S++S H
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERD----QCTWNSMVSGFAQHD 131
Query: 258 RCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLF 317
RC +E L F +M G ++ + A V+S C+ + ++++ ++H + K + ++
Sbjct: 132 RC---EEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVY 188
Query: 318 VKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSL 377
+ +AL+D Y K ++ DA VF ++ ++N+ SWN+LI+ + ++G EA V + +S
Sbjct: 189 IGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLES- 247
Query: 378 DGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAA 437
+V+P+ VT ++V+S CA L+A
Sbjct: 248 ---------------------------------------RVEPDEVTLASVISACASLSA 268
Query: 438 LNLGRELHGYAVRN-LMDDNILVGNGLINMYMKCGDFKKGHLVFDN------------IE 484
+ +G+E+HG V+N + ++I++ N ++MY KC K+ +FD+ I
Sbjct: 269 IKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMIS 328
Query: 485 G-------------------RDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVT 525
G R+++SWN+LI+GY +G + AL+ F + + + P H +
Sbjct: 329 GYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYS 388
Query: 526 FVTALSACS-----HAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAND 580
F L AC+ H G+ A L + + E + L+D+ + G ++E
Sbjct: 389 FANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYL 448
Query: 581 IVRNMPIEPNEYIWGALL 598
+ R M +E + W A++
Sbjct: 449 VFRKM-MERDCVSWNAMI 465
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 369 bits (946), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/661 (31%), Positives = 357/661 (54%), Gaps = 51/661 (7%)
Query: 48 ITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYA--RFGSVSHAQKVFNAVPFE 105
I+L+++C +L+Q +Q H I T + P+ A+KL A+ A F S+ +A+KVF+ +P
Sbjct: 34 ISLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIP-- 91
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGM-RKFGFFPDGFTLPLIIEACSHLGSSSLC 164
+ WN++IRA S +I ++ M + +P+ +T P +I+A + + S SL
Sbjct: 92 -KPNSFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLG 150
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
+ +H A++ + + V N L+ Y G ++ AC++F + + +
Sbjct: 151 QSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDV------------- 197
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
V+W S+++ + G D+ LELFK M + + S +
Sbjct: 198 ----------------------VSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTM 235
Query: 285 AVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN 344
V+S CA + ++ R++ Y+ + L + NA++D Y K + DA +F ++
Sbjct: 236 VGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEE 295
Query: 345 KNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGE 404
K+ +W ++ YA S E A VL + + ++++W+A+IS + G
Sbjct: 296 KDNVTWTTMLDGYAISEDYEAAREVLNSMPQK---------DIVAWNALISAYEQNGKPN 346
Query: 405 ESLELFRRMQLAK-VKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
E+L +F +QL K +K N +T + LS CA++ AL LGR +H Y ++ + N V + L
Sbjct: 347 EALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSAL 406
Query: 464 INMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDH 523
I+MY KCGD +K VF+++E RD+ W+++I G MHG G+ A+ F +M +A +KP+
Sbjct: 407 IHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNG 466
Query: 524 VTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVR 583
VTF ACSH GLV +LF+QM + I P +HYAC+VD+LGR+G L++A +
Sbjct: 467 VTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIE 526
Query: 584 NMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWED 643
MPI P+ +WGALL +C+ H + + E +++L L + G+ +LLSNIYA G+WE+
Sbjct: 527 AMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKWEN 586
Query: 644 SARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
+ +R + GLKK PG S IE+ ++ F +G+ H ++VY L E+ ++ + Y
Sbjct: 587 VSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSNGY 646
Query: 704 E 704
E
Sbjct: 647 E 647
Score = 147 bits (371), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 176/400 (44%), Gaps = 48/400 (12%)
Query: 46 FFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
F I + S+L + LH + +A F+A LI Y G + A KVF +
Sbjct: 136 FLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTI--- 192
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCR 165
+ + WNS+I V G + A+E++ M T+ ++ AC+ + + R
Sbjct: 193 KEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGR 252
Query: 166 IVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNH 225
V + E +L + N ++ MY K G +EDA +LFD M + ++W TM+ GYA +
Sbjct: 253 QVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISE 312
Query: 226 DCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELF-KLMRTRGCEISAEAL 284
D A + M +D V W +L+S++++ G +E L +F +L + +++ L
Sbjct: 313 DYEAAREVLNSMPQKDI----VAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITL 368
Query: 285 AVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN 344
+S CA V ++ R IH Y+ K G V +ALI Y K L + VF ++
Sbjct: 369 VSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEK 428
Query: 345 KNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGE 404
+++ W+A+I A G CG
Sbjct: 429 RDVFVWSAMIGGLAMHG----------------------------------------CGN 448
Query: 405 ESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGREL 444
E++++F +MQ A VKPN VTF+ V C+ ++ L
Sbjct: 449 EAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESL 488
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 366 bits (939), Expect = e-101, Method: Compositional matrix adjust.
Identities = 210/661 (31%), Positives = 352/661 (53%), Gaps = 52/661 (7%)
Query: 48 ITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIA---LYARFGSVSHAQKVFNAVPF 104
++LL C TLQ R +H+Q I + + +KLI L F + +A VF +
Sbjct: 37 LSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI-- 94
Query: 105 ERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLC 164
+ ++ +WN++ R + A+++YV M G P+ +T P ++++C+ +
Sbjct: 95 -QEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEG 153
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
+ +H H L+LG L+V L+ MY + GR+EDA ++FD P R ++S+ ++ GYA
Sbjct: 154 QQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASR 213
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
A ++F + ++D V+W +++S + G Y E LELFK M +
Sbjct: 214 GYIENAQKLFDEIPVKD----VVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 269
Query: 285 AVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN 344
V+S CA ++ R++H ++ G+ L + NALID
Sbjct: 270 VTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDL------------------- 310
Query: 345 KNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGE 404
Y++ G E A + +L P + +VISW+ +I G+ +
Sbjct: 311 ------------YSKCGELETACGLFERL--------PYK-DVISWNTLIGGYTHMNLYK 349
Query: 405 ESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNL--MDDNILVGNG 462
E+L LF+ M + PN VT ++L CA L A+++GR +H Y + L + + +
Sbjct: 350 EALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTS 409
Query: 463 LINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPD 522
LI+MY KCGD + H VF++I + L SWN++I G+ MHG D + F M K G++PD
Sbjct: 410 LIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPD 469
Query: 523 HVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIV 582
+TFV LSACSH+G++ GR++F M +++++ P +EHY C++DLLG +GL +EA +++
Sbjct: 470 DITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMI 529
Query: 583 RNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWE 642
M +EP+ IW +LL +C+ H + ++ E A ++ + + GS++LLSNIYA+ GRW
Sbjct: 530 NMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENPGSYVLLSNIYASAGRWN 589
Query: 643 DSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANEN 702
+ A+ R KG+KK PG S IE+ V+ F G+ H E+Y +LEE+ + +
Sbjct: 590 EVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEKAG 649
Query: 703 Y 703
+
Sbjct: 650 F 650
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 364 bits (934), Expect = e-100, Method: Compositional matrix adjust.
Identities = 205/679 (30%), Positives = 365/679 (53%), Gaps = 44/679 (6%)
Query: 83 IALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFF 142
+ Y R S+ A K+F+ +P + D + WN I+ N+ G +E A+E++ M+ G
Sbjct: 30 MGFYGRCVSLGFANKLFDEMP--KRDDLA-WNEIVMVNLRSGNWEKAVELFREMQFSGAK 86
Query: 143 PDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQL 202
T+ +++ CS+ + R +H + L LG +++ + N L+ MY + G++E + ++
Sbjct: 87 AYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKV 146
Query: 203 FDGMPVRTILSWNTMVSGY---AFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRC 259
F+ M R + SWN+++S Y + D +G + ME+ +P+ VTW SLLS +
Sbjct: 147 FNSMKDRNLSSWNSILSSYTKLGYVDDAIG---LLDEMEICGLKPDIVTWNSLLSGYASK 203
Query: 260 GLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVK 319
GL + + + K M+ G + S +++ ++ A+ + + IHGY+++ ++V+
Sbjct: 204 GLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVE 263
Query: 320 NALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDG 379
LID Y K +L A VF + KN+ +WN+L+S + + L ++A A+++++EK +G
Sbjct: 264 TTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEK--EG 321
Query: 380 HQP--------------------------------LRPNVISWSAVISGFASKGCGEESL 407
+P + PNV+SW+A+ SG + G +L
Sbjct: 322 IKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNAL 381
Query: 408 ELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMY 467
++F +MQ V PN T ST+L + L+ L+ G+E+HG+ +R + + V L++MY
Sbjct: 382 KVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMY 441
Query: 468 MKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFV 527
K GD + +F I+ + L SWN ++ GY M G G+ + F M++AGM+PD +TF
Sbjct: 442 GKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFT 501
Query: 528 TALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPI 587
+ LS C ++GLV G F M + I PT+EH +C+VDLLGR+G L EA D ++ M +
Sbjct: 502 SVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSL 561
Query: 588 EPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARV 647
+P+ IWGA L+SC+ H+D ++ E ++ L + ++M++ N+Y+ RWED R+
Sbjct: 562 KPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERI 621
Query: 648 RISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENYELN- 706
R + ++ SWI++ + V+ F A H ++Y L +L +M Y +
Sbjct: 622 RNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDT 681
Query: 707 SCFNQECIYDQSELVLVAN 725
SC +Q+ + E +L+ +
Sbjct: 682 SCIHQDISDSEKEKLLMGH 700
Score = 193 bits (491), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 122/436 (27%), Positives = 221/436 (50%), Gaps = 45/436 (10%)
Query: 167 VHCHALELGFRN-HLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNH 225
+H ++ G N VV+ +G YG+ + A +LFD MP R L+WN +V
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIV------- 61
Query: 226 DCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALA 285
+ R G +++ +ELF+ M+ G + +
Sbjct: 62 ----------------------------MVNLRSGNWEKAVELFREMQFSGAKAYDSTMV 93
Query: 286 VVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK 345
++ VC++ R+IHGYV++ G E + + N+LI Y ++ L + VF +K++
Sbjct: 94 KLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDR 153
Query: 346 NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEE 405
NL SWN+++SSY + G ++A +L ++E L+P++++W++++SG+ASKG ++
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEIC-----GLKPDIVTWNSLLSGYASKGLSKD 208
Query: 406 SLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLIN 465
++ + +RMQ+A +KP+ + S++L AE L LG+ +HGY +RN + ++ V LI+
Sbjct: 209 AIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLID 268
Query: 466 MYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVT 525
MY+K G +VFD ++ +++++WNSL+SG L +A M K G+KPD +T
Sbjct: 269 MYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAIT 328
Query: 526 FVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM 585
+ + S + G ++ +M +E + P V + + + G + A + M
Sbjct: 329 WNSLASGYATLGKPEKALDVIGKM-KEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKM 387
Query: 586 PIE---PNEYIWGALL 598
E PN LL
Sbjct: 388 QEEGVGPNAATMSTLL 403
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/439 (23%), Positives = 187/439 (42%), Gaps = 77/439 (17%)
Query: 47 FITLLQQCSTLQ---QARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
+ LLQ CS + + RQ+H + + LI +Y+R G + ++KVFN++
Sbjct: 92 MVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMK 151
Query: 104 FERL-----------------DHIPL---------------WNSIIRANVSHGYFEFAIE 131
L D I L WNS++ S G + AI
Sbjct: 152 DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIA 211
Query: 132 IYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYG 191
+ M+ G P ++ +++A + G L + +H + L ++V L+ MY
Sbjct: 212 VLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYI 271
Query: 192 KLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTS 251
K G + A +FD M + I++WN++VSG ++ A + RME E +P+++TW S
Sbjct: 272 KTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNS 331
Query: 252 LLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCAD------------------ 293
L S + G ++ L++ M+ +G + + + S C+
Sbjct: 332 LASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEG 391
Query: 294 -----------------VVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAH 336
+ + +E+HG+ ++ +V AL+D Y K L A
Sbjct: 392 VGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAI 451
Query: 337 NVFFDIKNKNLESWNALISSYAESGLCEEAHAVL-LQLEKSLDGHQPLRPNVISWSAVIS 395
+F+ IKNK+L SWN ++ YA G EE A + LE ++ P+ I++++V+S
Sbjct: 452 EIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGME------PDAITFTSVLS 505
Query: 396 GFASKGCGEESLELFRRMQ 414
+ G +E + F M+
Sbjct: 506 VCKNSGLVQEGWKYFDLMR 524
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 98/223 (43%), Gaps = 6/223 (2%)
Query: 440 LGRELHGYAVRNLMDD-NILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGY 498
LG +HG ++ +D+ + V + + Y +C + +FD + RD ++WN ++
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVN 64
Query: 499 GMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPT 558
G + A+ F EM +G K T V L CS+ A GR + ++R +E
Sbjct: 65 LRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLR-LGLESN 123
Query: 559 VEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRT--HKDTKIVEETASQ 616
V L+ + R G L+ + + +M + N W ++L+S + D I +
Sbjct: 124 VSMCNSLIVMYSRNGKLELSRKVFNSMK-DRNLSSWNSILSSYTKLGYVDDAIGLLDEME 182
Query: 617 ILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKT 659
I L I LLS YA+ G +D+ V + GLK +
Sbjct: 183 ICGLKPDIVTWNSLLSG-YASKGLSKDAIAVLKRMQIAGLKPS 224
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 359 bits (922), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 208/660 (31%), Positives = 342/660 (51%), Gaps = 81/660 (12%)
Query: 47 FITLLQQC---STLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F LL+ C + L+ +++H + + F L +YA+ V+ A+KVF+ +P
Sbjct: 138 FTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP 197
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
ER + WN+I+ +G A+E+ M + P T+ ++ A S L S+
Sbjct: 198 -ER--DLVSWNTIVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISV 254
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
+ +H +A+ GF + +++ LV MY K G +E A QLFDGM R ++SWN+M+ Y
Sbjct: 255 GKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQ 314
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
N + A IF++M E +P V+ L +
Sbjct: 315 NENPKEAMLIFQKMLDEGVKPTDVSVMGALHA---------------------------- 346
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
CAD+ +++R R IH ++ G + + V N+LI Y K K + A ++F ++
Sbjct: 347 -------CADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQ 399
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
++ L SWNA+I +A++G +P+
Sbjct: 400 SRTLVSWNAMILGFAQNG-------------------RPI-------------------- 420
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
++L F +M+ VKP+ T+ +V++ AEL+ + + +HG +R+ +D N+ V L
Sbjct: 421 -DALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTAL 479
Query: 464 INMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDH 523
++MY KCG L+FD + R + +WN++I GYG HG G AL F+EM K +KP+
Sbjct: 480 VDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNG 539
Query: 524 VTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVR 583
VTF++ +SACSH+GLV AG FY M + IE +++HY +VDLLGRAG L EA D +
Sbjct: 540 VTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIM 599
Query: 584 NMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWED 643
MP++P ++GA+L +C+ HK+ E+ A ++ LN G +LL+NIY A WE
Sbjct: 600 QMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEK 659
Query: 644 SARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
+VR+S ++GL+KTPG S +E++ +V++F +G+ H ++Y LE+L + Y
Sbjct: 660 VGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGY 719
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 351 bits (901), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 205/692 (29%), Positives = 359/692 (51%), Gaps = 90/692 (13%)
Query: 44 EDFFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
+ F+ +L+ + Q +Q+H++ ++ FL KLI + FG ++ A++VF+ +P
Sbjct: 21 DSFYASLIDSATHKAQLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP 80
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
++ P WN+IIR + +F+ A+ +Y M+ PD FT P +++ACS L +
Sbjct: 81 RPQI--FP-WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQM 137
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPV--RTILSWNTMVSGY 221
R VH LGF + V N L+ +Y K R+ A +F+G+P+ RTI
Sbjct: 138 GRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTI---------- 187
Query: 222 AFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISA 281
V+WT+++S++ + G E LE+F MR +
Sbjct: 188 -------------------------VSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDW 222
Query: 282 EALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFD 341
AL V++ + ++ + R IH V+K G E
Sbjct: 223 VALVSVLNAFTCLQDLKQGRSIHASVVKMGLE---------------------------- 254
Query: 342 IKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKG 401
I+ L S N + YA+ G A + +++ PN+I W+A+ISG+A G
Sbjct: 255 IEPDLLISLNTM---YAKCGQVATAKILFDKMKS---------PNLILWNAMISGYAKNG 302
Query: 402 CGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGN 461
E++++F M V+P+ ++ ++ +S CA++ +L R ++ Y R+ D++ + +
Sbjct: 303 YAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISS 362
Query: 462 GLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKP 521
LI+M+ KCG + LVFD RD++ W+++I GYG+HG A++ + M + G+ P
Sbjct: 363 ALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHP 422
Query: 522 DHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI 581
+ VTF+ L AC+H+G+V G F +M + +I P +HYAC++DLLGRAG L +A ++
Sbjct: 423 NDVTFLGLLMACNHSGMVREGWWFFNRMA-DHKINPQQQHYACVIDLLGRAGHLDQAYEV 481
Query: 582 VRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRW 641
++ MP++P +WGALL++C+ H+ ++ E A Q+ +++ TG ++ LSN+YAA W
Sbjct: 482 IKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLW 541
Query: 642 EDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQM--- 698
+ A VR+ K+KGL K G SW+EVR ++ F G+ H +E+ +E + ++
Sbjct: 542 DRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEG 601
Query: 699 ---ANEN---YELNSCFNQECIYDQSELVLVA 724
AN++ ++LN +E + SE + +A
Sbjct: 602 GFVANKDASLHDLNDEEAEETLCSHSERIAIA 633
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 351 bits (900), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 196/566 (34%), Positives = 309/566 (54%), Gaps = 22/566 (3%)
Query: 145 GFTLPL-----IIEACSHLGSSSLCRIVHCHALELGF-RNHLHVVNKLVGMYGKLGRMED 198
G LP +++ C S + +H H GF R + + N L+GMY K G+ D
Sbjct: 41 GIRLPFDLLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPID 100
Query: 199 ACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKR 258
AC++FD M +R + SWN MVSGY + V A +F M D V+W +++ + +
Sbjct: 101 ACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERD----VVSWNTMVIGYAQ 156
Query: 259 CGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFV 318
G E L +K R G + + + A +++ C ++ +R+ HG V+ G+ + +
Sbjct: 157 DGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVL 216
Query: 319 KNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLD 378
++ID Y K + A F ++ K++ W LIS YA+ G E A + ++ +
Sbjct: 217 SCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEK-- 274
Query: 379 GHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAAL 438
N +SW+A+I+G+ +G G +L+LFR+M VKP TFS+ L A +A+L
Sbjct: 275 -------NPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASL 327
Query: 439 NLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGR-DLISWNSLISG 497
G+E+HGY +R + N +V + LI+MY K G + VF + + D + WN++IS
Sbjct: 328 RHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISA 387
Query: 498 YGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEP 557
HGLG AL D+MIK ++P+ T V L+ACSH+GLV G F M + I P
Sbjct: 388 LAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVP 447
Query: 558 TVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQI 617
EHYACL+DLLGRAG +E + MP EP+++IW A+L CR H + ++ ++ A ++
Sbjct: 448 DQEHYACLIDLLGRAGCFKELMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADEL 507
Query: 618 LTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKV--YTFS 675
+ L+ + + ++LLS+IYA +G+WE ++R KK+ + K SWIE+ KKV +T S
Sbjct: 508 IKLDPESSAPYILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVS 567
Query: 676 AGNIVHLGLDEVYVILEELALQMANE 701
G+ H +E+Y IL LA + E
Sbjct: 568 DGSHAHARKEEIYFILHNLAAVIEEE 593
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 174/394 (44%), Gaps = 43/394 (10%)
Query: 243 RPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSRE 302
RP V S LS H + + + + +G + + LA ++ C D + + +
Sbjct: 9 RPICVA-QSFLSKHATKAELSQAVSRLESLTQQGIRLPFDLLASLLQQCGDTKSLKQGKW 67
Query: 303 IHGYV-IKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESG 361
IH ++ I G + N LI Y K DA VF + +NL SWN ++S Y +SG
Sbjct: 68 IHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSG 127
Query: 362 LCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPN 421
+ A V + P R +V+SW+ ++ G+A G E+L ++ + + +K N
Sbjct: 128 MLVRARVVFDSM--------PER-DVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFN 178
Query: 422 CVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFD 481
+F+ +L+ C + L L R+ HG + N+++ +I+ Y KCG + FD
Sbjct: 179 EFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFD 238
Query: 482 NIEGRDL-------------------------------ISWNSLISGYGMHGLGDNALTT 510
+ +D+ +SW +LI+GY G G+ AL
Sbjct: 239 EMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDL 298
Query: 511 FDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLG 570
F +MI G+KP+ TF + L A + + G+ + M+R + P + L+D+
Sbjct: 299 FRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRT-NVRPNAIVISSLIDMYS 357
Query: 571 RAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTH 604
++G L+ + + R + + W ++++ H
Sbjct: 358 KSGSLEASERVFRICDDKHDCVFWNTMISALAQH 391
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 178/405 (43%), Gaps = 44/405 (10%)
Query: 45 DFFITLLQQC---STLQQARQLHSQTILTAAYRKP--FLAAKLIALYARFGSVSHAQKVF 99
D +LLQQC +L+Q + +H +T +++P L+ LI +Y + G A KVF
Sbjct: 47 DLLASLLQQCGDTKSLKQGKWIHRHLKITG-FKRPNTLLSNHLIGMYMKCGKPIDACKVF 105
Query: 100 NAVPFERL-----------------------DHIP-----LWNSIIRANVSHGYFEFAIE 131
+ + L D +P WN+++ G A+
Sbjct: 106 DQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALW 165
Query: 132 IYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYG 191
Y R+ G + F+ ++ AC L R H L GF +++ + ++ Y
Sbjct: 166 FYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYA 225
Query: 192 KLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTS 251
K G+ME A + FD M V+ I W T++SGYA D A ++F M N V+WT+
Sbjct: 226 KCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMP----EKNPVSWTA 281
Query: 252 LLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGG 311
L++ + R G + L+LF+ M G + + + A + + +EIHGY+I+
Sbjct: 282 LIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN 341
Query: 312 YEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK-NLESWNALISSYAESGLCEEAHAVL 370
V ++LID Y K L + VF +K + WN +IS+ A+ GL H L
Sbjct: 342 VRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGL---GHKAL 398
Query: 371 LQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQL 415
L+ + ++PN + +++ + G EE L F M +
Sbjct: 399 RMLDDMIKFR--VQPNRTTLVVILNACSHSGLVEEGLRWFESMTV 441
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 349 bits (896), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 215/671 (32%), Positives = 343/671 (51%), Gaps = 29/671 (4%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAK--LIALYARFGSVSHAQKVFNAVPF 104
I + + S L ARQL + +P A+ +++ Y G ++ A+ VF P
Sbjct: 55 LIDVYCKSSELNYARQLFDEI------SEPDKIARTTMVSGYCASGDITLARGVFEKAPV 108
Query: 105 ERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSS-SL 163
D + ++N++I + AI ++ M+ GF PD FT ++ + +
Sbjct: 109 CMRDTV-MYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQ 167
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGR----MEDACQLFDGMPVRTILSWNTMVS 219
C H AL+ G V N LV +Y K + A ++FD + + SW TM++
Sbjct: 168 CVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMT 227
Query: 220 GYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEI 279
GY N + + M D V + +++S + G Y E LE+ + M + G E+
Sbjct: 228 GYVKNGYFDLGEELLEGM---DDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIEL 284
Query: 280 SAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLF-VKNALIDTYRKHKHLGDAHNV 338
VI CA + +++H YV++ ED+ F N+L+ Y K +A +
Sbjct: 285 DEFTYPSVIRACATAGLLQLGKQVHAYVLR--REDFSFHFDNSLVSLYYKCGKFDEARAI 342
Query: 339 FFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFA 398
F + K+L SWNAL+S Y SG EA + ++++ N++SW +ISG A
Sbjct: 343 FEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEK---------NILSWMIMISGLA 393
Query: 399 SKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNIL 458
G GEE L+LF M+ +P FS + CA L A G++ H ++ D ++
Sbjct: 394 ENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLS 453
Query: 459 VGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAG 518
GN LI MY KCG ++ VF + D +SWN+LI+ G HG G A+ ++EM+K G
Sbjct: 454 AGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKG 513
Query: 519 MKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEA 578
++PD +T +T L+ACSHAGLV GR F M +RI P +HYA L+DLL R+G +A
Sbjct: 514 IRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDA 573
Query: 579 NDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAAN 638
++ ++P +P IW ALL+ CR H + ++ A ++ L + G++MLLSN++AA
Sbjct: 574 ESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAAT 633
Query: 639 GRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQM 698
G+WE+ ARVR + +G+KK SWIE+ +V+TF + H + VY+ L++L +M
Sbjct: 634 GQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEM 693
Query: 699 ANENYELNSCF 709
Y ++ F
Sbjct: 694 RRLGYVPDTSF 704
Score = 171 bits (432), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 121/483 (25%), Positives = 228/483 (47%), Gaps = 53/483 (10%)
Query: 160 SSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVS 219
S L R VH + + GF+ H++N+L+ +Y K + A QLFD + ++ TMVS
Sbjct: 29 SLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVS 88
Query: 220 GYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLS--SHKRCGLYDETLELFKLMRTRGC 277
GY + D A +F++ + ++V + ++++ SH G + LF M+ G
Sbjct: 89 GYCASGDITLARGVFEKAPV--CMRDTVMYNAMITGFSHNNDGY--SAINLFCKMKHEGF 144
Query: 278 EISAEALAVVISVCADVVEVDRS-REIHGYVIKGGYEDYLFVKNALIDTYRKHKH----L 332
+ A V++ A V + ++ + H +K G V NAL+ Y K L
Sbjct: 145 KPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLL 204
Query: 333 GDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSA 392
A VF +I K+ SW +++ Y ++G + +L ++ ++ +++++A
Sbjct: 205 HSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNM--------KLVAYNA 256
Query: 393 VISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNL 452
+ISG+ ++G +E+LE+ RRM + ++ + T+ +V+ CA L LG+++H Y +R
Sbjct: 257 MISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR- 315
Query: 453 MDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGY-------------- 498
D + N L+++Y KCG F + +F+ + +DL+SWN+L+SGY
Sbjct: 316 EDFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFK 375
Query: 499 -----------------GMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAA 541
+G G+ L F M + G +P F A+ +C+ G
Sbjct: 376 EMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCN 435
Query: 542 GRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSC 601
G+ Q+++ + ++ L+ + + G+++EA + R MP + W AL+ +
Sbjct: 436 GQQYHAQLLK-IGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAAL 493
Query: 602 RTH 604
H
Sbjct: 494 GQH 496
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 347 bits (890), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 223/698 (31%), Positives = 361/698 (51%), Gaps = 56/698 (8%)
Query: 49 TLLQQCSTLQQ-----------ARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQK 97
TLL+ C+ L Q A+ +H + I + +L L+ +Y++ G HA+K
Sbjct: 11 TLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARK 70
Query: 98 VFNAVPF-----------------------ERLDHIPL-----WNSIIRANVSHGYFEFA 129
+F+ +P E D +P W ++I + G + A
Sbjct: 71 LFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKA 130
Query: 130 IEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGM 189
I + M K G P FTL ++ + + + VH ++LG R ++ V N L+ M
Sbjct: 131 IRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNM 190
Query: 190 YGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTW 249
Y K G A +FD M VR I SWN M++ + A F++M D VTW
Sbjct: 191 YAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD----IVTW 246
Query: 250 TSLLSSHKRCGLYDETLELF-KLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVI 308
S++S + G L++F K++R LA V+S CA++ ++ ++IH +++
Sbjct: 247 NSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIV 306
Query: 309 KGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNL--ESWNALISSYAESGLCEEA 366
G++ V NALI Y + + A + K+L E + AL+ Y + G +A
Sbjct: 307 TTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQA 366
Query: 367 HAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFS 426
+ + L+ +V++W+A+I G+ G E++ LFR M +PN T +
Sbjct: 367 KNIFVSLKDR---------DVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLA 417
Query: 427 TVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIE-G 485
+LSV + LA+L+ G+++HG AV++ ++ V N LI MY K G+ FD I
Sbjct: 418 AMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCE 477
Query: 486 RDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNL 545
RD +SW S+I HG + AL F+ M+ G++PDH+T+V SAC+HAGLV GR
Sbjct: 478 RDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQY 537
Query: 546 FYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHK 605
F M +I PT+ HYAC+VDL GRAGLLQEA + + MPIEP+ WG+LL++CR HK
Sbjct: 538 FDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHK 597
Query: 606 DTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWI 665
+ + + A ++L L + +G++ L+N+Y+A G+WE++A++R S K +KK G SWI
Sbjct: 598 NIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWI 657
Query: 666 EVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
EV+ KV+ F + H +E+Y+ ++++ ++ Y
Sbjct: 658 EVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGY 695
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 346 bits (888), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 192/633 (30%), Positives = 337/633 (53%), Gaps = 52/633 (8%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGS--VSHAQKVFNAVPF 104
++LL++C L +Q+ +Q I+ PF +++LIA A S + ++ K+ +
Sbjct: 56 LLSLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIEN 115
Query: 105 ERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFF---PDGFTLPLIIEACSHLGSS 161
+I WN IR + + +Y M + G PD FT P++ + C+ L S
Sbjct: 116 P---NIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLS 172
Query: 162 SLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGY 221
SL ++ H L+L HV N + M+ G ME+A ++FD PVR +
Sbjct: 173 SLGHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDL---------- 222
Query: 222 AFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISA 281
V+W L++ +K+ G ++ + ++KLM + G +
Sbjct: 223 -------------------------VSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDD 257
Query: 282 EALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFD 341
+ ++S C+ + +++R +E + YV + G + + NAL+D + K + +A +F +
Sbjct: 258 VTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDN 317
Query: 342 IKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKG 401
++ + + SW +IS YA GL + + + +E+ +V+ W+A+I G
Sbjct: 318 LEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEK---------DVVLWNAMIGGSVQAK 368
Query: 402 CGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGN 461
G+++L LF+ MQ + KP+ +T LS C++L AL++G +H Y + + N+ +G
Sbjct: 369 RGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGT 428
Query: 462 GLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKP 521
L++MY KCG+ + VF I+ R+ +++ ++I G +HG A++ F+EMI AG+ P
Sbjct: 429 SLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAP 488
Query: 522 DHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI 581
D +TF+ LSAC H G++ GR+ F QM F + P ++HY+ +VDLLGRAGLL+EA+ +
Sbjct: 489 DEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRL 548
Query: 582 VRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRW 641
+ +MP+E + +WGALL CR H + ++ E+ A ++L L+ +G ++LL +Y W
Sbjct: 549 MESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVLLDGMYGEANMW 608
Query: 642 EDSARVRISAKKKGLKKTPGQSWIEVRKKVYTF 674
ED+ R R ++G++K PG S IEV V F
Sbjct: 609 EDAKRARRMMNERGVEKIPGCSSIEVNGIVCEF 641
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 345 bits (885), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 206/725 (28%), Positives = 356/725 (49%), Gaps = 87/725 (12%)
Query: 47 FITLLQQC---STLQQARQLHSQTILTAAYRKP--FLAAKLIALYARFGSVSHAQKVFNA 101
++ LL+ C ++ R LH++ L + +P F+ KL+++YA+ G ++ A+KVF++
Sbjct: 84 YLKLLESCIDSGSIHLGRILHARFGL---FTEPDVFVETKLLSMYAKCGCIADARKVFDS 140
Query: 102 VPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSS 161
+ R ++ W+++I A + +++ M K G PD F P I++ C++ G
Sbjct: 141 M---RERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDV 197
Query: 162 SLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGY 221
+++H ++LG + L V N ++ +Y K G ++ A + F M R +++WN+++ Y
Sbjct: 198 EAGKVIHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAY 257
Query: 222 AFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEI-- 279
N A + K ME E P VTW L+ + + G D ++L + M T G
Sbjct: 258 CQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADV 317
Query: 280 ---------------------------------SAEALAVVISVCADVVEVDRSREIHGY 306
+A + +S C+ + +++ E+H
Sbjct: 318 FTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSI 377
Query: 307 VIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEA 366
+K G+ D + V N+L+D Y K L DA VF +KNK++ +WN++I+ Y ++G C +A
Sbjct: 378 AVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKA 437
Query: 367 HAVLLQLEKSLDGHQPLRPNVISWSAVISGFA---------------------------- 398
+ + +++ + LRPN+I+W+ +ISG+
Sbjct: 438 YELFTRMQDA-----NLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATW 492
Query: 399 --------SKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVR 450
G +E+LELFR+MQ ++ PN VT ++L CA L + RE+HG +R
Sbjct: 493 NLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLR 552
Query: 451 NLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTT 510
+D V N L + Y K GD + +F +E +D+I+WNSLI GY +HG AL
Sbjct: 553 RNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALAL 612
Query: 511 FDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLG 570
F++M G+ P+ T + + A G V G+ +FY + ++ I P +EH + +V L G
Sbjct: 613 FNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYG 672
Query: 571 RAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFML 630
RA L+EA ++ M I+ IW + L CR H D + A + +L + T + +
Sbjct: 673 RANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENLFSLEPENTATESI 732
Query: 631 LSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVI 690
+S IYA + S + LKK GQSWIEVR ++TF+ G+ L D +Y +
Sbjct: 733 VSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYPL 792
Query: 691 LEELA 695
+E+++
Sbjct: 793 VEKMS 797
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 162/387 (41%), Gaps = 52/387 (13%)
Query: 275 RGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGY-EDYLFVKNALIDTYRKHKHLG 333
+G ++ ++ C D + R +H G + E +FV+ L+ Y K +
Sbjct: 75 QGSKVKRSTYLKLLESCIDSGSIHLGRILHARF--GLFTEPDVFVETKLLSMYAKCGCIA 132
Query: 334 DAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAV 393
DA VF ++ +NL +W+A+I +Y+ R N W
Sbjct: 133 DARKVFDSMRERNLFTWSAMIGAYS-------------------------REN--RW--- 162
Query: 394 ISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLM 453
E +LFR M V P+ F +L CA + G+ +H ++ M
Sbjct: 163 ----------REVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGM 212
Query: 454 DDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDE 513
+ V N ++ +Y KCG+ F + RD+I+WNS++ Y +G + A+ E
Sbjct: 213 SSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVKE 272
Query: 514 MIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAG 573
M K G+ P VT+ + + G A +L +M F I V + ++ L G
Sbjct: 273 MEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIHNG 331
Query: 574 LLQEANDIVRNM---PIEPNEYIWGALLNSCRTHK---DTKIVEETASQILTLNSQITGS 627
+ +A D+ R M + PN + +++C K V A ++ ++ + G+
Sbjct: 332 MRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGN 391
Query: 628 FMLLSNIYAANGRWEDSARVRISAKKK 654
++ ++Y+ G+ ED+ +V S K K
Sbjct: 392 SLV--DMYSKCGKLEDARKVFDSVKNK 416
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 345 bits (884), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 205/649 (31%), Positives = 322/649 (49%), Gaps = 79/649 (12%)
Query: 56 TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNS 115
++ QLH + + + + L+A Y + V A+KVF+ + ER + WNS
Sbjct: 210 SVHGGEQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMT-ER--DVISWNS 266
Query: 116 IIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELG 175
II VS+G E + ++V M G D T+ + C+ SL R VH ++
Sbjct: 267 IINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC 326
Query: 176 FRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFK 235
F N L+ MY K G ++ A +F M R++
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSV------------------------ 362
Query: 236 RMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVV 295
V++TS+++ + R GL E ++LF+ M G + V++ CA
Sbjct: 363 -----------VSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYR 411
Query: 296 EVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALIS 355
+D + +H ++ + +FV NAL+D Y
Sbjct: 412 LLDEGKRVHEWIKENDLGFDIFVSNALMDMY----------------------------- 442
Query: 356 SYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM-Q 414
A+ G +EA V ++ ++ISW+ +I G++ E+L LF + +
Sbjct: 443 --AKCGSMQEAELVFSEMRV---------KDIISWNTIIGGYSKNCYANEALSLFNLLLE 491
Query: 415 LAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFK 474
+ P+ T + VL CA L+A + GRE+HGY +RN + V N L++MY KCG
Sbjct: 492 EKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALL 551
Query: 475 KGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACS 534
H++FD+I +DL+SW +I+GYGMHG G A+ F++M +AG++ D ++FV+ L ACS
Sbjct: 552 LAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACS 611
Query: 535 HAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIW 594
H+GLV G F M E +IEPTVEHYAC+VD+L R G L +A + NMPI P+ IW
Sbjct: 612 HSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIW 671
Query: 595 GALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKK 654
GALL CR H D K+ E+ A ++ L + TG ++L++NIYA +WE R+R ++
Sbjct: 672 GALLCGCRIHHDVKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQR 731
Query: 655 GLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
GL+K PG SWIE++ +V F AG+ + + + L ++ +M E Y
Sbjct: 732 GLRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGY 780
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 183/401 (45%), Gaps = 55/401 (13%)
Query: 198 DACQLFDGMPVRTILSWNTMVSG----------YAFNHDCVGASRIFKRMELEDWRPNSV 247
D+ L DG V + N V Y D ASR+F +++E ++
Sbjct: 106 DSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIE----KAL 161
Query: 248 TWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYV 307
W L++ + G + ++ LFK M + G E+ + + V + + V ++HG++
Sbjct: 162 FWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFI 221
Query: 308 IKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAH 367
+K G+ + V N+L+ Y K++ + A VF ++ +++ SWN++I+ Y +GL E+
Sbjct: 222 LKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGL 281
Query: 368 AVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFST 427
+V +Q+ ++SG ++ + T +
Sbjct: 282 SVFVQM-------------------LVSG---------------------IEIDLATIVS 301
Query: 428 VLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRD 487
V + CA+ ++LGR +H V+ N L++MY KCGD VF + R
Sbjct: 302 VFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRS 361
Query: 488 LISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFY 547
++S+ S+I+GY GL A+ F+EM + G+ PD T L+ C+ L+ G+ + +
Sbjct: 362 VVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRV-H 420
Query: 548 QMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIE 588
+ ++E + + L+D+ + G +QEA + M ++
Sbjct: 421 EWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK 461
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 146/316 (46%), Gaps = 55/316 (17%)
Query: 278 EISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHN 337
+I L V+ +CAD + +E+ ++ G+ +ID+
Sbjct: 91 DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGF---------VIDS------------ 129
Query: 338 VFFDIKNKNLESWNALISSYAESGLCEEAHAVL--LQLEKSLDGHQPLRPNVISWSAVIS 395
NL S +L+ Y G +EA V +++EK+L W+ +++
Sbjct: 130 --------NLGSKLSLM--YTNCGDLKEASRVFDEVKIEKAL-----------FWNILMN 168
Query: 396 GFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDD 455
A G S+ LF++M + V+ + TFS V + L +++ G +LHG+ +++ +
Sbjct: 169 ELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGE 228
Query: 456 NILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMI 515
VGN L+ Y+K VFD + RD+ISWNS+I+GY +GL + L+ F +M+
Sbjct: 229 RNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQML 288
Query: 516 KAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMV-----REFRIEPTVEHYACLVDLLG 570
+G++ D T V+ + C+ + L++ GR + V RE R T L+D+
Sbjct: 289 VSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNT------LLDMYS 342
Query: 571 RAGLLQEANDIVRNMP 586
+ G L A + R M
Sbjct: 343 KCGDLDSAKAVFREMS 358
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/234 (21%), Positives = 104/234 (44%), Gaps = 13/234 (5%)
Query: 50 LLQQCSTL---QQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
+L C++L + R++H + + +A L+ +YA+ G++ A +F+ + +
Sbjct: 505 VLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKD 564
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLG-SSSLCR 165
L W +I HG+ + AI ++ MR+ G D + ++ ACSH G R
Sbjct: 565 L---VSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWR 621
Query: 166 IVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILS-WNTMVSGYAFN 224
+ E + +V M + G + A + + MP+ + W ++ G +
Sbjct: 622 FFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIH 681
Query: 225 HDCVGASRIFKRM-ELEDWRPNSVTWTSLLSS-HKRCGLYDETLELFKLMRTRG 276
HD A ++ +++ ELE P + + L+++ + +++ L K + RG
Sbjct: 682 HDVKLAEKVAEKVFELE---PENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRG 732
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 343 bits (880), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 200/701 (28%), Positives = 350/701 (49%), Gaps = 82/701 (11%)
Query: 45 DFFITLLQQCSTLQQARQ------LHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKV 98
+++ ++QC L Q +H I Y + FL ++ YA S ++A++V
Sbjct: 4 NYYSVQIKQCIGLGARNQSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRV 63
Query: 99 FNAVP--------------------------FERL---DHIPLWNSIIRANVSHGYFEFA 129
F+ +P FE+L D + WN +I G A
Sbjct: 64 FDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVT-WNVLIEGYSLSGLVGAA 122
Query: 130 IEIY-VGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVG 188
++ Y MR F TL +++ S G SL + +H ++LGF ++L V + L+
Sbjct: 123 VKAYNTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLY 182
Query: 189 MYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVT 248
MY +G + DA ++F G+ R + +N+++ G A ++F+ ME +SV+
Sbjct: 183 MYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-----KDSVS 237
Query: 249 WTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVI 308
W +++ + GL E +E F+ M+ +G ++ V+ C + ++ ++IH +I
Sbjct: 238 WAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACII 297
Query: 309 KGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHA 368
+ ++D+++V +ALID Y K K L A VF +K KN
Sbjct: 298 RTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKN---------------------- 335
Query: 369 VLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTV 428
V+SW+A++ G+ G EE++++F MQ + + P+ T
Sbjct: 336 ------------------VVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQA 377
Query: 429 LSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDL 488
+S CA +++L G + HG A+ + + + V N L+ +Y KCGD +F+ + RD
Sbjct: 378 ISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDA 437
Query: 489 ISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQ 548
+SW +++S Y G + FD+M++ G+KPD VT +SACS AGLV G+ F
Sbjct: 438 VSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKL 497
Query: 549 MVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTK 608
M E+ I P++ HY+C++DL R+G L+EA + MP P+ W LL++CR + +
Sbjct: 498 MTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLE 557
Query: 609 IVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVR 668
I + A ++ L+ + LLS+IYA+ G+W+ A++R ++K +KK PGQSWI+ +
Sbjct: 558 IGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWK 617
Query: 669 KKVYTFSAGNIVHLGLDEVYVILEELALQMANENYELNSCF 709
K+++FSA + LD++Y LEEL ++ + Y+ ++ F
Sbjct: 618 GKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSF 658
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 343 bits (879), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 200/636 (31%), Positives = 331/636 (52%), Gaps = 49/636 (7%)
Query: 62 QLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANV 121
Q+H + + F+ L+ YA G + A+KVF+ + ER ++ W S+I
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMS-ER--NVVSWTSMICGYA 211
Query: 122 SHGYFEFAIEIYVGM-RKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHL 180
+ + A++++ M R P+ T+ +I AC+ L V+ G +
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 271
Query: 181 HVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELE 240
+V+ LV MY K ++ A +LFD + N M S Y
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYV------------------ 313
Query: 241 DWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRS 300
R GL E L +F LM G ++ IS C+ + +
Sbjct: 314 -----------------RQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWG 356
Query: 301 REIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAES 360
+ HGYV++ G+E + + NALID Y K A +F + NK + +WN++++ Y E+
Sbjct: 357 KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVEN 416
Query: 361 GLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAK-VK 419
G + A + + N++SW+ +ISG EE++E+F MQ + V
Sbjct: 417 GEVDAAWETFETMPEK---------NIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVN 467
Query: 420 PNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLV 479
+ VT ++ S C L AL+L + ++ Y +N + ++ +G L++M+ +CGD + +
Sbjct: 468 ADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSI 527
Query: 480 FDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLV 539
F+++ RD+ +W + I M G + A+ FD+MI+ G+KPD V FV AL+ACSH GLV
Sbjct: 528 FNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLV 587
Query: 540 AAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLN 599
G+ +FY M++ + P HY C+VDLLGRAGLL+EA ++ +MP+EPN+ IW +LL
Sbjct: 588 QQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLA 647
Query: 600 SCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKT 659
+CR + ++ A +I L + TGS++LLSN+YA+ GRW D A+VR+S K+KGL+K
Sbjct: 648 ACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKP 707
Query: 660 PGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELA 695
PG S I++R K + F++G+ H + + +L+E++
Sbjct: 708 PGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVS 743
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 141/573 (24%), Positives = 235/573 (41%), Gaps = 118/573 (20%)
Query: 51 LQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFG---SVSHAQKVFNAVPFERL 107
L+ C T+ + + H KL+A G S+S A++VF E
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS--ESY 96
Query: 108 DHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIV 167
++NS+IR S G AI +++ M G PD +T P + AC+ + +
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 168 HCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDC 227
H +++G+ L V N LV Y + G ++ A ++FD M R ++SW +M+ GYA
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 228 VGASRIFKRM-ELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
A +F RM E+ PNSVT +
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVT-----------------------------------MVC 241
Query: 287 VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKN 346
VIS CA + +++ +++ ++ G E + +AL+D Y K + A +F + N
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 347 LESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEES 406
L+ NA+ S+Y GL EA
Sbjct: 302 LDLCNAMASNYVRQGLTREA---------------------------------------- 321
Query: 407 LELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMD--DNILVGNGLI 464
L +F M + V+P+ ++ + +S C++L + G+ HGY +RN + DNI N LI
Sbjct: 322 LGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC--NALI 379
Query: 465 NMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMI--------- 515
+MYMKC +FD + + +++WNS+++GY +G D A TF+ M
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 516 -----------------------KAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVRE 552
+ G+ D VT ++ SAC H G + + ++Y + +
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY-YIEK 498
Query: 553 FRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM 585
I+ V LVD+ R G + A I ++
Sbjct: 499 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 342 bits (878), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 212/663 (31%), Positives = 320/663 (48%), Gaps = 48/663 (7%)
Query: 49 TLLQQCSTLQQ---ARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
+LL C ++ Q+H+ I + L KL+ Y+ F + AQ + +
Sbjct: 48 SLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSI---IENS 104
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCR 165
+ H WN +I + + FE I Y M G PD FT P +++AC + R
Sbjct: 105 DILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGR 164
Query: 166 IVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNH 225
+VH +++ L+V N L+ MY + M A +LFD M R +SWN +++ YA
Sbjct: 165 VVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEG 224
Query: 226 DCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALA 285
A +F +M + +TW + + G Y L L MR + A+
Sbjct: 225 MWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDPVAMI 284
Query: 286 VVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK 345
+ + C+ + + +EIHG I Y+ V+N LI Y K K L A VF +
Sbjct: 285 IGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEEN 344
Query: 346 NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEE 405
+L +WN++IS YA QL KS EE
Sbjct: 345 SLCTWNSIISGYA-------------QLNKS---------------------------EE 364
Query: 406 SLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAV-RNLMDDNILVGNGLI 464
+ L R M +A +PN +T +++L +CA +A L G+E H Y + R D ++ N L+
Sbjct: 365 ASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRKCFKDYTMLWNSLV 424
Query: 465 NMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHV 524
++Y K G V D + RD +++ SLI GYG G G AL F EM ++G+KPDHV
Sbjct: 425 DVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALALFKEMTRSGIKPDHV 484
Query: 525 TFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRN 584
T V LSACSH+ LV G LF +M E+ I P ++H++C+VDL GRAG L +A DI+ N
Sbjct: 485 TVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYGRAGFLAKAKDIIHN 544
Query: 585 MPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDS 644
MP +P+ W LLN+C H +T+I + A ++L + + G ++L++N+YAA G W
Sbjct: 545 MPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLEMKPENPGYYVLIANMYAAAGSWSKL 604
Query: 645 ARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEEL-ALQMANENY 703
A VR + G+KK PG +WI+ FS G+ Y +L+ L L N Y
Sbjct: 605 AEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNTYPLLDGLNQLMKDNAGY 664
Query: 704 ELN 706
+N
Sbjct: 665 AIN 667
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 122/306 (39%), Gaps = 49/306 (16%)
Query: 253 LSSHKRCGLYDETLELFKLMRTRGCEISAEAL-----AVVISVCADVVEVDRSREIHGYV 307
L+SH G + + F L+R + ++ L A ++S C DV ++H +
Sbjct: 13 LASH---GHLHDAFKTFSLLRLQSSSAVSDDLVLHSAASLLSACVDVRAFLAGVQVHAHC 69
Query: 308 IKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAH 367
I G E + + L+ Y +A ++ + + WN LI+SYA++ L EE
Sbjct: 70 ISSGVEYHSVLVPKLVTFYSAFNLHNEAQSIIENSDILHPLPWNVLIASYAKNELFEEVI 129
Query: 368 AVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFST 427
A ++ + +RP+ T+ +
Sbjct: 130 AAYKRMVS-----KGIRPDAF-----------------------------------TYPS 149
Query: 428 VLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRD 487
VL C E + GR +HG + ++ V N LI+MY + + +FD + RD
Sbjct: 150 VLKACGETLDVAFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERD 209
Query: 488 LISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFY 547
+SWN++I+ Y G+ A FD+M +G++ +T+ C G L
Sbjct: 210 AVSWNAVINCYASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLIS 269
Query: 548 QMVREF 553
+M R F
Sbjct: 270 RM-RNF 274
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 342 bits (878), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 200/636 (31%), Positives = 331/636 (52%), Gaps = 49/636 (7%)
Query: 62 QLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANV 121
Q+H + + F+ L+ YA G + A+KVF+ + ER ++ W S+I
Sbjct: 155 QIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMS-ER--NVVSWTSMICGYA 211
Query: 122 SHGYFEFAIEIYVGM-RKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHL 180
+ + A++++ M R P+ T+ +I AC+ L V+ G +
Sbjct: 212 RRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVND 271
Query: 181 HVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELE 240
+V+ LV MY K ++ A +LFD + N M S Y
Sbjct: 272 LMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYV------------------ 313
Query: 241 DWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRS 300
R GL E L +F LM G ++ IS C+ + +
Sbjct: 314 -----------------RQGLTREALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWG 356
Query: 301 REIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAES 360
+ HGYV++ G+E + + NALID Y K A +F + NK + +WN++++ Y E+
Sbjct: 357 KSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVEN 416
Query: 361 GLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAK-VK 419
G + A + + N++SW+ +ISG EE++E+F MQ + V
Sbjct: 417 GEVDAAWETFETMPEK---------NIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVN 467
Query: 420 PNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLV 479
+ VT ++ S C L AL+L + ++ Y +N + ++ +G L++M+ +CGD + +
Sbjct: 468 ADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPESAMSI 527
Query: 480 FDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLV 539
F+++ RD+ +W + I M G + A+ FD+MI+ G+KPD V FV AL+ACSH GLV
Sbjct: 528 FNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACSHGGLV 587
Query: 540 AAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLN 599
G+ +FY M++ + P HY C+VDLLGRAGLL+EA ++ +MP+EPN+ IW +LL
Sbjct: 588 QQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIWNSLLA 647
Query: 600 SCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKT 659
+CR + ++ A +I L + TGS++LLSN+YA+ GRW D A+VR+S K+KGL+K
Sbjct: 648 ACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEKGLRKP 707
Query: 660 PGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELA 695
PG S I++R K + F++G+ H + + +L+E++
Sbjct: 708 PGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVS 743
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 141/573 (24%), Positives = 235/573 (41%), Gaps = 118/573 (20%)
Query: 51 LQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFG---SVSHAQKVFNAVPFERL 107
L+ C T+ + + H KL+A G S+S A++VF E
Sbjct: 39 LKNCKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS--ESY 96
Query: 108 DHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIV 167
++NS+IR S G AI +++ M G PD +T P + AC+ + +
Sbjct: 97 GTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQI 156
Query: 168 HCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDC 227
H +++G+ L V N LV Y + G ++ A ++FD M R ++SW +M+ GYA
Sbjct: 157 HGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFA 216
Query: 228 VGASRIFKRM-ELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
A +F RM E+ PNSVT +
Sbjct: 217 KDAVDLFFRMVRDEEVTPNSVT-----------------------------------MVC 241
Query: 287 VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKN 346
VIS CA + +++ +++ ++ G E + +AL+D Y K + A +F + N
Sbjct: 242 VISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASN 301
Query: 347 LESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEES 406
L+ NA+ S+Y GL EA
Sbjct: 302 LDLCNAMASNYVRQGLTREA---------------------------------------- 321
Query: 407 LELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMD--DNILVGNGLI 464
L +F M + V+P+ ++ + +S C++L + G+ HGY +RN + DNI N LI
Sbjct: 322 LGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNIC--NALI 379
Query: 465 NMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMI--------- 515
+MYMKC +FD + + +++WNS+++GY +G D A TF+ M
Sbjct: 380 DMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNT 439
Query: 516 -----------------------KAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVRE 552
+ G+ D VT ++ SAC H G + + ++Y + +
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYY-YIEK 498
Query: 553 FRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM 585
I+ V LVD+ R G + A I ++
Sbjct: 499 NGIQLDVRLGTTLVDMFSRCGDPESAMSIFNSL 531
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 340 bits (872), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 195/598 (32%), Positives = 311/598 (52%), Gaps = 72/598 (12%)
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL 172
WNS+I G A+ + MRK +P + P I+ACS L + H A
Sbjct: 44 WNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAF 103
Query: 173 ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASR 232
G+++ + V + L+ MY G++EDA ++FD +P R I+SW +M+ GY N + + A
Sbjct: 104 VFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVS 163
Query: 233 IFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCA 292
+FK + +++ D+ +F + + L VIS C+
Sbjct: 164 LFKDLLVDE--------------------NDDDDAMF---------LDSMGLVSVISACS 194
Query: 293 DVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDA--HNVFFDIKNKNLESW 350
V + IH +VIK G++ + V N L+D Y K G A +F I +K+ S+
Sbjct: 195 RVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSY 254
Query: 351 NALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELF 410
N+ ++S +A G E+ E+F
Sbjct: 255 NS----------------------------------------IMSVYAQSGMSNEAFEVF 274
Query: 411 RRMQLAKVKP-NCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMK 469
RR+ KV N +T STVL + AL +G+ +H +R ++D+++VG +I+MY K
Sbjct: 275 RRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCK 334
Query: 470 CGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTA 529
CG + FD ++ +++ SW ++I+GYGMHG AL F MI +G++P+++TFV+
Sbjct: 335 CGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSV 394
Query: 530 LSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEP 589
L+ACSHAGL G F M F +EP +EHY C+VDLLGRAG LQ+A D+++ M ++P
Sbjct: 395 LAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKP 454
Query: 590 NEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRI 649
+ IW +LL +CR HK+ ++ E + +++ L+S G +MLLS+IYA GRW+D RVR+
Sbjct: 455 DSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRM 514
Query: 650 SAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENYELNS 707
K +GL K PG S +E+ +V+ F G+ H +++Y L EL ++ Y N+
Sbjct: 515 IMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNT 572
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 111/474 (23%), Positives = 198/474 (41%), Gaps = 102/474 (21%)
Query: 47 FITLLQQCSTLQQ---ARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F ++ CS+L +Q H Q + F+++ LI +Y+ G + A+KVF+ +P
Sbjct: 79 FPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIP 138
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGM------RKFGFFPDGFTLPLIIEACSH 157
+I W S+IR +G A+ ++ + F D L +I ACS
Sbjct: 139 KR---NIVSWTSMIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSR 195
Query: 158 LGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGR--MEDACQLFDGMPVRTILSWN 215
+ + L +H ++ GF + V N L+ Y K G + A ++FD + + +S+N
Sbjct: 196 VPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYN 255
Query: 216 TMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELF-KLMRT 274
+++S YA + G+ +E E+F +L++
Sbjct: 256 SIMSVYA-----------------------------------QSGMSNEAFEVFRRLVKN 280
Query: 275 RGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGD 334
+ +A L+ V+ + + + IH VI+ G ED + V ++ID Y K +
Sbjct: 281 KVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVET 340
Query: 335 AHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVI 394
A F +KNKN+ SW A+I+ Y G HA
Sbjct: 341 ARKAFDRMKNKNVRSWTAMIAGYGMHG-----HAA------------------------- 370
Query: 395 SGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMD 454
++LELF M + V+PN +TF +VL+ C+ + G + G+ N M
Sbjct: 371 ----------KALELFPAMIDSGVRPNYITFVSVLAACS-----HAGLHVEGWRWFNAMK 415
Query: 455 DNILVGNGL------INMYMKCGDFKKGHLVFDNIEGR-DLISWNSLISGYGMH 501
V GL +++ + G +K + + ++ + D I W+SL++ +H
Sbjct: 416 GRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIH 469
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 105/245 (42%), Gaps = 48/245 (19%)
Query: 384 RPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRE 443
+ +V SW++VI+ A G E+L F M+ + P +F + C+ L + G++
Sbjct: 38 KTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQ 97
Query: 444 LHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGL 503
H A +I V + LI MY CG + VFD I R+++SW S+I GY ++G
Sbjct: 98 THQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGN 157
Query: 504 GDNALTTFDEMI------KAGMKPDHVTFVTALSACSHA--------------------- 536
+A++ F +++ M D + V+ +SACS
Sbjct: 158 ALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRG 217
Query: 537 ----------------GLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAND 580
G VA R +F Q+V + R+ Y ++ + ++G+ EA +
Sbjct: 218 VSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVS-----YNSIMSVYAQSGMSNEAFE 272
Query: 581 IVRNM 585
+ R +
Sbjct: 273 VFRRL 277
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 338 bits (867), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 207/703 (29%), Positives = 353/703 (50%), Gaps = 53/703 (7%)
Query: 47 FITLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F ++L C +L+ QLH + ++ L++LY G++ A+ +F+ +
Sbjct: 291 FSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMS 350
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
+ D + +N++I GY E A+E++ M G PD TL ++ ACS G+
Sbjct: 351 --QRDAVT-YNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR 407
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
+ +H + +LGF ++ + L+ +Y K +E A F V ++ WN M+ Y
Sbjct: 408 GQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGL 467
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
D + RIF++M++E+ PN T+ S+L + R G + ++ + +++A
Sbjct: 468 LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
Query: 284 LAVVISVCADVVEVDRSREI----------HGYVIKGGYEDYLFVKNALIDTYRKHKHLG 333
+V+I + A + ++D + +I + GY Y F AL T+R+ G
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALT-TFRQMLDRG 586
Query: 334 ---------DAHNVFFDIK-----------------NKNLESWNALISSYAESGLCEEAH 367
+A + ++ + +L NAL++ Y+ G EE++
Sbjct: 587 IRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY 646
Query: 368 AVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFST 427
Q E + I+W+A++SGF G EE+L +F RM + N TF +
Sbjct: 647 LAFEQTEAG---------DNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGS 697
Query: 428 VLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRD 487
+ +E A + G+++H + D V N LI+MY KCG F + ++
Sbjct: 698 AVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKN 757
Query: 488 LISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFY 547
+SWN++I+ Y HG G AL +FD+MI + ++P+HVT V LSACSH GLV G F
Sbjct: 758 EVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFE 817
Query: 548 QMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDT 607
M E+ + P EHY C+VD+L RAGLL A + ++ MPI+P+ +W LL++C HK+
Sbjct: 818 SMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNM 877
Query: 608 KIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEV 667
+I E A +L L + + +++LLSN+YA + +W+ R K+KG+KK PGQSWIEV
Sbjct: 878 EIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEV 937
Query: 668 RKKVYTFSAGNIVHLGLDEVYVILEELALQMANENYELNSCFN 710
+ +++F G+ H DE++ ++L + + Y + CF+
Sbjct: 938 KNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGY-VQDCFS 979
Score = 177 bits (450), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 132/540 (24%), Positives = 232/540 (42%), Gaps = 85/540 (15%)
Query: 44 EDFFITLLQQCS----TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVF 99
E F +L+ C Q+H++ + + LI LY+R G V A++VF
Sbjct: 186 EGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVF 245
Query: 100 NAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLG 159
+ + RL W ++I + AI ++ M G P + ++ AC +
Sbjct: 246 DGL---RLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIE 302
Query: 160 SSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVS 219
S + +H L+LGF + +V N LV +Y LG + A +F M R
Sbjct: 303 SLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR---------- 352
Query: 220 GYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEI 279
++VT+ +L++ +CG ++ +ELFK M G E
Sbjct: 353 -------------------------DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEP 387
Query: 280 SAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVF 339
+ LA ++ C+ + R +++H Y K G+ ++ AL++ Y K + A + F
Sbjct: 388 DSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYF 447
Query: 340 FDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFAS 399
+ + +N+ WN ++ +Y GL ++ LR
Sbjct: 448 LETEVENVVLWNVMLVAY---GLLDD-----------------LR--------------- 472
Query: 400 KGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILV 459
S +FR+MQ+ ++ PN T+ ++L C L L LG ++H ++ N V
Sbjct: 473 -----NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 527
Query: 460 GNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGM 519
+ LI+MY K G + G+D++SW ++I+GY + D ALTTF +M+ G+
Sbjct: 528 CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 587
Query: 520 KPDHVTFVTALSACSHAGLVAAGRNLFYQM-VREFRIEPTVEHYACLVDLLGRAGLLQEA 578
+ D V A+SAC+ + G+ + Q V F + ++ LV L R G ++E+
Sbjct: 588 RSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN--ALVTLYSRCGKIEES 645
Score = 160 bits (406), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 141/545 (25%), Positives = 228/545 (41%), Gaps = 109/545 (20%)
Query: 140 GFFPDGFTLPLIIEACSHL-GSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMED 198
G P+ TL ++E C GS R +H L+LG ++ + KL Y G +
Sbjct: 79 GIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYG 138
Query: 199 ACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKR 258
A ++FD MP RTI +WN M+ A + +F RM E+ PN T++ +L +
Sbjct: 139 AFKVFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEA--- 195
Query: 259 CGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFV 318
RG SV DVVE +IH ++ G D V
Sbjct: 196 ---------------CRGG-----------SVAFDVVE-----QIHARILYQGLRDSTVV 224
Query: 319 KNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLD 378
N LID Y ++ + A VF GL + H+
Sbjct: 225 CNPLIDLYSRNGFVDLARRVF--------------------DGLRLKDHS---------- 254
Query: 379 GHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAAL 438
SW A+ISG + C E++ LF M + + P FS+VLS C ++ +L
Sbjct: 255 ----------SWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESL 304
Query: 439 NLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGY 498
+G +LHG ++ + V N L+++Y G+ +F N+ RD +++N+LI+G
Sbjct: 305 EIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGL 364
Query: 499 GMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVR------- 551
G G+ A+ F M G++PD T + + ACS G + G+ L +
Sbjct: 365 SQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNN 424
Query: 552 --------------------EFRIEPTVEHYACLVDLLGRAGLLQEAND---IVRNMPIE 588
++ +E VE+ +L GLL + + I R M IE
Sbjct: 425 KIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE 484
Query: 589 ---PNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSF-MLLSNIYAANGRWEDS 644
PN+Y + ++L +C D ++ E+ SQI+ N Q+ +L ++YA G+ + +
Sbjct: 485 EIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTA 544
Query: 645 ARVRI 649
+ I
Sbjct: 545 WDILI 549
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 131/543 (24%), Positives = 230/543 (42%), Gaps = 94/543 (17%)
Query: 50 LLQQC----STLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
LL+ C +L + R+LHSQ + L+ KL Y G + A KVF+ +P E
Sbjct: 90 LLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMP-E 148
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSS---S 162
R I WN +I+ S ++V M P+ T ++EAC G S
Sbjct: 149 RT--IFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACR--GGSVAFD 204
Query: 163 LCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYA 222
+ +H L G R+ V N L+ +Y + G ++ A ++FDG+ ++ SW M+SG +
Sbjct: 205 VVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLS 264
Query: 223 FNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAE 282
N A R+F C +Y + +M T
Sbjct: 265 KNECEAEAIRLF------------------------CDMY-----VLGIMPT------PY 289
Query: 283 ALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDI 342
A + V+S C + ++ ++HG V+K G+ +V NAL+ Y +L A ++F ++
Sbjct: 290 AFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNM 349
Query: 343 KNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGC 402
++ ++N LI+ ++ G E+A
Sbjct: 350 SQRDAVTYNTLINGLSQCGYGEKA------------------------------------ 373
Query: 403 GEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNG 462
+ELF+RM L ++P+ T ++++ C+ L G++LH Y + N +
Sbjct: 374 ----MELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 429
Query: 463 LINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPD 522
L+N+Y KC D + F E +++ WN ++ YG+ N+ F +M + P+
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 489
Query: 523 HVTFVTALSACSHAGLVAAGRNLFYQMVR-EFRIEPTVEHYAC--LVDLLGRAGLLQEAN 579
T+ + L C G + G + Q+++ F++ Y C L+D+ + G L A
Sbjct: 490 QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNA----YVCSVLIDMYAKLGKLDTAW 545
Query: 580 DIV 582
DI+
Sbjct: 546 DIL 548
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 338 bits (867), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 199/645 (30%), Positives = 325/645 (50%), Gaps = 84/645 (13%)
Query: 51 LQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHI 110
L +C+ L Q +QLH+Q I + +A KLI+ + + A +VFN V + ++
Sbjct: 26 LPKCANLNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQV---QEPNV 82
Query: 111 PLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCH 170
L NS+IRA+ + A ++ M++FG F D FT P +++ACS + +++H H
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 171 ALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGA 230
+LG + ++V N L+ Y + G G+ VR A
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCG----------GLGVRD-------------------A 173
Query: 231 SRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISV 290
++F++M D +V+W S+L + G + LF M R
Sbjct: 174 MKLFEKMSERD----TVSWNSMLGGLVKAGELRDARRLFDEMPQRD-------------- 215
Query: 291 CADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESW 350
L N ++D Y + + + A +F + +N SW
Sbjct: 216 -------------------------LISWNTMLDGYARCREMSKAFELFEKMPERNTVSW 250
Query: 351 NALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRP-NVISWSAVISGFASKGCGEESLEL 409
+ ++ Y+++G E A + ++ PL NV++W+ +I+G+A KG +E+ L
Sbjct: 251 STMVMGYSKAGDMEMARVMFDKM--------PLPAKNVVTWTIIIAGYAEKGLLKEADRL 302
Query: 410 FRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMK 469
+M + +K + ++L+ C E L+LG +H R+ + N V N L++MY K
Sbjct: 303 VDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAK 362
Query: 470 CGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTA 529
CG+ KK VF++I +DL+SWN+++ G G+HG G A+ F M + G++PD VTF+
Sbjct: 363 CGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAV 422
Query: 530 LSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEP 589
L +C+HAGL+ G + FY M + + + P VEHY CLVDLLGR G L+EA +V+ MP+EP
Sbjct: 423 LCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEP 482
Query: 590 NEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRI 649
N IWGALL +CR H + I +E ++ L+ G++ LLSNIYAA WE A +R
Sbjct: 483 NVVIWGALLGACRMHNEVDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRS 542
Query: 650 SAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEEL 694
K G++K G S +E+ ++ F+ + H D++Y +L L
Sbjct: 543 KMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQMLGSL 587
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 89/179 (49%), Gaps = 10/179 (5%)
Query: 48 ITLLQQCST---LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPF 104
I++L C+ L ++HS + ++ L+ +YA+ G++ A VFN +P
Sbjct: 319 ISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPK 378
Query: 105 ERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLC 164
+ L WN+++ HG+ + AIE++ MR+ G PD T ++ +C+H G
Sbjct: 379 KDLVS---WNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEG 435
Query: 165 RIVHCHALELGFR--NHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR-TILSWNTMVSG 220
I + +++E + + LV + G++GR+++A ++ MP+ ++ W ++
Sbjct: 436 -IDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGA 493
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 337 bits (865), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 208/666 (31%), Positives = 333/666 (50%), Gaps = 87/666 (13%)
Query: 55 STLQQARQLHSQTILTAAYRKP---FLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIP 111
S+L+ A SQ Y+ LA LI Y G V A+ +F+ +P +R +
Sbjct: 21 SSLRNAGVESSQNTEYPPYKPKKHHILATNLIVSYFEKGLVEEARSLFDEMP-DR--DVV 77
Query: 112 LWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHA 171
W ++I S Y A E + M K G P+ FTL ++++C ++ + +VH
Sbjct: 78 AWTAMITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVV 137
Query: 172 LELGFRNHLHVVNKLVGMYGKLG-RMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGA 230
++LG L+V N ++ MY ME AC +F + V+
Sbjct: 138 VKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVK--------------------- 176
Query: 231 SRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISV 290
N VTWT+L++ G L+++K M E++ + + +
Sbjct: 177 --------------NDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVRA 222
Query: 291 CADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESW 350
A + V ++IH VIK G++ L V N+++D Y + +L +A + F ++++K+L +W
Sbjct: 223 SASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITW 282
Query: 351 NALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELF 410
N LIS +LE+S E+L +F
Sbjct: 283 NTLIS----------------ELERSDS-------------------------SEALLMF 301
Query: 411 RRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKC 470
+R + PNC TF+++++ CA +AALN G++LHG R + N+ + N LI+MY KC
Sbjct: 302 QRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKC 361
Query: 471 GDFKKGHLVFDNI-EGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTA 529
G+ VF I + R+L+SW S++ GYG HG G A+ FD+M+ +G++PD + F+
Sbjct: 362 GNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAV 421
Query: 530 LSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEP 589
LSAC HAGLV G F M E+ I P + Y C+VDLLGRAG + EA ++V MP +P
Sbjct: 422 LSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKP 481
Query: 590 NEYIWGALLNSCRTHKDTKIVEETAS-QILTLNSQITGSFMLLSNIYAANGRWEDSARVR 648
+E WGA+L +C+ HK ++ A+ +++ L ++ G++++LS IYAA G+W D ARVR
Sbjct: 482 DESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVGTYVMLSYIYAAEGKWVDFARVR 541
Query: 649 ISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY--ELN 706
+ G KK G SWI V +V++F+ + + VY +L L + Y EL+
Sbjct: 542 KMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEETREAGYVPELD 601
Query: 707 SCFNQE 712
S N +
Sbjct: 602 SLVNDQ 607
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 108/237 (45%), Gaps = 11/237 (4%)
Query: 47 FITLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F +L+ C+ L +QLH + + LA LI +YA+ G++ +Q+VF +
Sbjct: 316 FTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIV 375
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLG-SSS 162
R ++ W S++ SHGY A+E++ M G PD ++ AC H G
Sbjct: 376 DRR--NLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEK 433
Query: 163 LCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILS-WNTMVSG- 220
+ + E G + N +V + G+ G++ +A +L + MP + S W ++
Sbjct: 434 GLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYELVERMPFKPDESTWGAILGAC 493
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSV-TWTSLLSSHKRCGLYDETLELFKLMRTRG 276
A H+ + SR+ R +E +P V T+ L + G + + + K+MR G
Sbjct: 494 KAHKHNGL-ISRLAARKVME-LKPKMVGTYVMLSYIYAAEGKWVDFARVRKMMRMMG 548
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 337 bits (865), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 206/719 (28%), Positives = 356/719 (49%), Gaps = 108/719 (15%)
Query: 49 TLLQQCSTLQ-----QARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
+ +Q CS L QL S + + R ++ LI Y + G++ +A+ VF+A+P
Sbjct: 151 SFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP 210
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
+ W ++I V G +++++ + + PDG+ L ++ ACS L
Sbjct: 211 EK---STVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEG 267
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
+ +H H L G ++N L+ Y K GR+ A +LF+GMP + I+S
Sbjct: 268 GKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIIS---------- 317
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
WT+LLS +K+ L+ E +ELF M G + A
Sbjct: 318 -------------------------WTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYA 352
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAH------- 336
+ +++ CA + + ++H Y IK + +V N+LID Y K L DA
Sbjct: 353 CSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFA 412
Query: 337 ---------------------------NVFFDIKNK----NLESWNALI---SSYAESGL 362
N+F D++ + +L ++ +L+ +S GL
Sbjct: 413 AADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGL 472
Query: 363 CEEAHAVLLQLEKSLD---GHQPLR--------------------PNVISWSAVISGFAS 399
++ H ++ + +LD G + +++ W+++ +G+
Sbjct: 473 SKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQ 532
Query: 400 KGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILV 459
+ EE+L LF +QL++ +P+ TF+ +++ LA++ LG+E H ++ ++ N +
Sbjct: 533 QSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYI 592
Query: 460 GNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGM 519
N L++MY KCG + H FD+ RD++ WNS+IS Y HG G AL ++M+ G+
Sbjct: 593 TNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGI 652
Query: 520 KPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAN 579
+P+++TFV LSACSHAGLV G F M+R F IEP EHY C+V LLGRAG L +A
Sbjct: 653 EPNYITFVGVLSACSHAGLVEDGLKQFELMLR-FGIEPETEHYVCMVSLLGRAGRLNKAR 711
Query: 580 DIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANG 639
+++ MP +P +W +LL+ C + ++ E A + + + +GSF +LSNIYA+ G
Sbjct: 712 ELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKG 771
Query: 640 RWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQM 698
W ++ +VR K +G+ K PG+SWI + K+V+ F + + H +++Y +L++L +Q+
Sbjct: 772 MWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQI 830
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 129/542 (23%), Positives = 242/542 (44%), Gaps = 86/542 (15%)
Query: 63 LHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVS 122
+H Q I+ +L+ LI LY+R G + +A+KVF +P ER ++ W++++ A
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP-ER--NLVSWSTMVSACNH 122
Query: 123 HGYFEFAIEIYVGM-RKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHA--LELGFRNH 179
HG +E ++ +++ R P+ + L I+ACS L + + ++ GF
Sbjct: 123 HGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRD 182
Query: 180 LHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMEL 239
++V L+ Y K G ++ A +FD +P ++ ++W TM+SG CV R +
Sbjct: 183 VYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISG------CVKMGRSYV---- 232
Query: 240 EDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDR 299
+L+LF + L+ V+S C+ + ++
Sbjct: 233 -------------------------SLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEG 267
Query: 300 SREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAE 359
++IH ++++ G E + N LID+Y K + AH +F + NKN+ SW L+S Y +
Sbjct: 268 GKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQ 327
Query: 360 SGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVK 419
+ L +EA +ELF M +K
Sbjct: 328 NALHKEA----------------------------------------MELFTSMSKFGLK 347
Query: 420 PNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLV 479
P+ S++L+ CA L AL G ++H Y ++ + ++ V N LI+MY KC V
Sbjct: 348 PDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKV 407
Query: 480 FDNIEGRDLISWNSLISGYGMHGLG---DNALTTFDEMIKAGMKPDHVTFVTALSACSHA 536
FD D++ +N++I GY G AL F +M ++P +TFV+ L A +
Sbjct: 408 FDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASL 467
Query: 537 GLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGA 596
+ + + + ++ ++ + + + L+D+ L+++ + M ++ + IW +
Sbjct: 468 TSLGLSKQI-HGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNS 525
Query: 597 LL 598
+
Sbjct: 526 MF 527
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 131/260 (50%), Gaps = 6/260 (2%)
Query: 47 FITLLQQCSTLQQ---ARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F++LL+ ++L ++Q+H F + LI +Y+ + ++ VF+ +
Sbjct: 457 FVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEM- 515
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
++ + +WNS+ V E A+ +++ ++ PD FT ++ A +L S L
Sbjct: 516 --KVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQL 573
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
+ HC L+ G + ++ N L+ MY K G EDA + FD R ++ WN+++S YA
Sbjct: 574 GQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYAN 633
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
+ + A ++ ++M E PN +T+ +LS+ GL ++ L+ F+LM G E E
Sbjct: 634 HGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEH 693
Query: 284 LAVVISVCADVVEVDRSREI 303
++S+ ++++RE+
Sbjct: 694 YVCMVSLLGRAGRLNKAREL 713
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 118/254 (46%), Gaps = 18/254 (7%)
Query: 351 NALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELF 410
N LI+ Y+ +G A V ++ P R N++SWS ++S G EESL +F
Sbjct: 83 NILINLYSRAGGMVYARKVFEKM--------PER-NLVSWSTMVSACNHHGIYEESLVVF 133
Query: 411 RRM-QLAKVKPNCVTFSTVLSVCAELAALNLGR----ELHGYAVRNLMDDNILVGNGLIN 465
+ K PN S+ + C+ L GR +L + V++ D ++ VG LI+
Sbjct: 134 LEFWRTRKDSPNEYILSSFIQACSGLDGR--GRWMVFQLQSFLVKSGFDRDVYVGTLLID 191
Query: 466 MYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVT 525
Y+K G+ LVFD + + ++W ++ISG G +L F ++++ + PD
Sbjct: 192 FYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYI 251
Query: 526 FVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM 585
T LSACS + G+ + ++R + +E L+D + G + A+ + M
Sbjct: 252 LSTVLSACSILPFLEGGKQIHAHILR-YGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGM 310
Query: 586 PIEPNEYIWGALLN 599
P N W LL+
Sbjct: 311 P-NKNIISWTTLLS 323
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 103/230 (44%), Gaps = 5/230 (2%)
Query: 48 ITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERL 107
+T +++Q ++ H Q + P++ L+ +YA+ GS A K F++
Sbjct: 562 VTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASR-- 619
Query: 108 DHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIV 167
+ WNS+I + +HG + A+++ M G P+ T ++ ACSH G
Sbjct: 620 -DVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQ 678
Query: 168 HCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR-TILSWNTMVSGYAFNHD 226
L G +V + G+ GR+ A +L + MP + + W +++SG A +
Sbjct: 679 FELMLRFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGN 738
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRG 276
A + L D + +S ++T L + + G++ E ++ + M+ G
Sbjct: 739 VELAEHAAEMAILSDPK-DSGSFTMLSNIYASKGMWTEAKKVRERMKVEG 787
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 85/182 (46%), Gaps = 9/182 (4%)
Query: 425 FSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIE 484
F+ +L + A L+ +HG + ++ + + N LIN+Y + G VF+ +
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 485 GRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGM-KPDHVTFVTALSACSHAGLVAAGR 543
R+L+SW++++S HG+ + +L F E + P+ + + ACS GL GR
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACS--GLDGRGR 164
Query: 544 NLFYQMVREFRIEPTVEHY----ACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLN 599
+ +Q+ + F ++ + L+D + G + A + +P E + W +++
Sbjct: 165 WMVFQL-QSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALP-EKSTVTWTTMIS 222
Query: 600 SC 601
C
Sbjct: 223 GC 224
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 337 bits (864), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 198/659 (30%), Positives = 330/659 (50%), Gaps = 84/659 (12%)
Query: 46 FFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
F I + S+L++ +++H+ I ++ LI+LY + G A+KVF +P E
Sbjct: 135 FVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMP-E 193
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCR 165
R I WNS+I ++ G ++ ++ M K GF PD F+ + ACSH+ S + +
Sbjct: 194 R--DIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGK 251
Query: 166 IVHCHALELGFRN-HLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
+HCHA+ + V+ ++ MY K G + A ++F+GM R I++WN M+ YA N
Sbjct: 252 EIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARN 311
Query: 225 HDCVGASRIFKRM-ELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
A F++M E +P+ +T +LL A
Sbjct: 312 GRVTDAFLCFQKMSEQNGLQPDVITSINLLP----------------------------A 343
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
A++ R IHGY ++ G+ ++ ++ ALID Y + L A +F +
Sbjct: 344 SAIL-----------EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRMA 392
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
K NVISW+++I+ + G
Sbjct: 393 EK----------------------------------------NVISWNSIIAAYVQNGKN 412
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
+LELF+ + + + P+ T +++L AE +L+ GRE+H Y V++ N ++ N L
Sbjct: 413 YSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSL 472
Query: 464 INMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDH 523
++MY CGD + F++I +D++SWNS+I Y +HG G ++ F EMI + + P+
Sbjct: 473 VHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNK 532
Query: 524 VTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVR 583
TF + L+ACS +G+V G F M RE+ I+P +EHY C++DL+GR G A +
Sbjct: 533 STFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLE 592
Query: 584 NMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWED 643
MP P IWG+LLN+ R HKD I E A QI + TG ++LL N+YA GRWED
Sbjct: 593 EMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWED 652
Query: 644 SARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANEN 702
R+++ + KG+ +T +S +E + K + F+ G+ H+ +++Y +L+ ++ + E+
Sbjct: 653 VNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEED 711
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 101/406 (24%), Positives = 172/406 (42%), Gaps = 85/406 (20%)
Query: 196 MEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSS 255
MEDA QLFD M WN M+ G+
Sbjct: 80 MEDALQLFDEMNKADAFLWNVMIKGFT--------------------------------- 106
Query: 256 HKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDY 315
CGLY E ++ + M G + VI A + ++ ++IH VIK G+
Sbjct: 107 --SCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSD 164
Query: 316 LFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEK 375
++V N+LI Y K DA VF ++ +++ SWN++I
Sbjct: 165 VYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMI--------------------- 203
Query: 376 SLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAEL 435
SG+ + G G SL LF+ M KP+ + + L C+ +
Sbjct: 204 -------------------SGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHV 244
Query: 436 AALNLGRELHGYAVRNLMDD-NILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSL 494
+ +G+E+H +AVR+ ++ +++V +++MY K G+ +F+ + R++++WN +
Sbjct: 245 YSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVM 304
Query: 495 ISGYGMHGLGDNALTTFDEMIKA-GMKPDHVTFVTALSACSHAGLVAAGRNLF-YQMVRE 552
I Y +G +A F +M + G++PD +T + L A + + GR + Y M R
Sbjct: 305 IGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMRRG 360
Query: 553 FRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALL 598
F +E L+D+ G G L+ A I M E N W +++
Sbjct: 361 FLPHMVLE--TALIDMYGECGQLKSAEVIFDRMA-EKNVISWNSII 403
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 131/257 (50%), Gaps = 12/257 (4%)
Query: 343 KNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGC 402
K N + + +A+S L E+A LQL ++ + + W+ +I GF S G
Sbjct: 60 KQVNDPALTRALRGFADSRLMEDA----LQLFDEMN-----KADAFLWNVMIKGFTSCGL 110
Query: 403 GEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNG 462
E+++ + RM A VK + T+ V+ A +++L G+++H ++ ++ V N
Sbjct: 111 YIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNS 170
Query: 463 LINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPD 522
LI++YMK G VF+ + RD++SWNS+ISGY G G ++L F EM+K G KPD
Sbjct: 171 LISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPD 230
Query: 523 HVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEP-TVEHYACLVDLLGRAGLLQEANDI 581
+ ++AL ACSH G+ + VR RIE V ++D+ + G + A I
Sbjct: 231 RFSTMSALGACSHVYSPKMGKEIHCHAVRS-RIETGDVMVMTSILDMYSKYGEVSYAERI 289
Query: 582 VRNMPIEPNEYIWGALL 598
M I+ N W ++
Sbjct: 290 FNGM-IQRNIVAWNVMI 305
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 336 bits (862), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 205/681 (30%), Positives = 348/681 (51%), Gaps = 83/681 (12%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
F ++L+ C T+ ++H + ++AA LI LY+R+ +V +A+ +F+ +P
Sbjct: 156 FPSVLKACRTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRD 215
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRI 166
+ WN++I G + A+ + G+R D T+ ++ AC+ G +
Sbjct: 216 MGS---WNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSACTEAGDFNRGVT 268
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHD 226
+H ++++ G + L V NKL+ +Y + GR+ D ++FD M VR ++SWN+++ Y N
Sbjct: 269 IHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQ 328
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
+ A +F+ M L +P+ +T SL S L +L R C
Sbjct: 329 PLRAISLFQEMRLSRIQPDCLTLISLASI------------LSQLGDIRAC--------- 367
Query: 287 VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKN 346
R + G+ ++ G+ F+++ I
Sbjct: 368 --------------RSVQGFTLRKGW----FLEDITIG---------------------- 387
Query: 347 LESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEES 406
NA++ YA+ GL + A AV L + +VISW+ +ISG+A G E+
Sbjct: 388 ----NAVVVMYAKLGLVDSARAVFNWLPNT---------DVISWNTIISGYAQNGFASEA 434
Query: 407 LELFRRMQL-AKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLIN 465
+E++ M+ ++ N T+ +VL C++ AL G +LHG ++N + ++ V L +
Sbjct: 435 IEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLAD 494
Query: 466 MYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVT 525
MY KCG + +F I + + WN+LI+ +G HG G+ A+ F EM+ G+KPDH+T
Sbjct: 495 MYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHIT 554
Query: 526 FVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM 585
FVT LSACSH+GLV G+ F M ++ I P+++HY C+VD+ GRAG L+ A +++M
Sbjct: 555 FVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSM 614
Query: 586 PIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSA 645
++P+ IWGALL++CR H + + + + + + + G +LLSN+YA+ G+WE
Sbjct: 615 SLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVD 674
Query: 646 RVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENYEL 705
+R A KGL+KTPG S +EV KV F GN H +E+Y L L ++ Y
Sbjct: 675 EIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVP 734
Query: 706 NSCFN-QECIYDQSELVLVAN 725
+ F Q+ D+ E +L+++
Sbjct: 735 DHRFVLQDVEDDEKEHILMSH 755
Score = 200 bits (508), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 149/553 (26%), Positives = 253/553 (45%), Gaps = 90/553 (16%)
Query: 49 TLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLD 108
TL + C+ LQ A+ LH++ +++ + ++AKL+ LY G+V+ A+ F+ +
Sbjct: 59 TLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR--- 115
Query: 109 HIPLWNSIIRANVSHGYFEFAIEIY-VGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIV 167
+ WN +I G I + + M G PD T P +++AC + + +
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNK---I 172
Query: 168 HCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDC 227
HC AL+ GF ++V L+ +Y + + +A LFD MPVR + SWN M+SGY + +
Sbjct: 173 HCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNA 232
Query: 228 VGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVV 287
A + + D SVT SLLS+
Sbjct: 233 KEALTLSNGLRAMD----SVTVVSLLSA-------------------------------- 256
Query: 288 ISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNL 347
C + + +R IH Y IK G E LFV N LID Y + L D VF + ++L
Sbjct: 257 ---CTEAGDFNRGVTIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDL 313
Query: 348 ESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESL 407
SWN++I +Y + QPLR ++
Sbjct: 314 ISWNSIIKAYELN-------------------EQPLR---------------------AI 333
Query: 408 ELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRN-LMDDNILVGNGLINM 466
LF+ M+L++++P+C+T ++ S+ ++L + R + G+ +R ++I +GN ++ M
Sbjct: 334 SLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVM 393
Query: 467 YMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAG-MKPDHVT 525
Y K G VF+ + D+ISWN++ISGY +G A+ ++ M + G + + T
Sbjct: 394 YAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGT 453
Query: 526 FVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM 585
+V+ L ACS AG + G L ++++ + V L D+ G+ G L++A + +
Sbjct: 454 WVSVLPACSQAGALRQGMKLHGRLLKN-GLYLDVFVVTSLADMYGKCGRLEDALSLFYQI 512
Query: 586 PIEPNEYIWGALL 598
P N W L+
Sbjct: 513 P-RVNSVPWNTLI 524
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 77/174 (44%), Gaps = 9/174 (5%)
Query: 427 TVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGR 486
T+ C L + + LH V + N+ + L+N+Y G+ FD+I+ R
Sbjct: 59 TLFRYCTNLQS---AKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQNR 115
Query: 487 DLISWNSLISGYGMHGLGDNALTTFDE-MIKAGMKPDHVTFVTALSACSHAGLVAAGRNL 545
D+ +WN +ISGYG G + F M+ +G+ PD+ TF + L AC N
Sbjct: 116 DVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACR----TVIDGNK 171
Query: 546 FYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLN 599
+ + +F V A L+ L R + A + MP+ + W A+++
Sbjct: 172 IHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVR-DMGSWNAMIS 224
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 336 bits (861), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 208/660 (31%), Positives = 328/660 (49%), Gaps = 81/660 (12%)
Query: 47 FITLLQQCSTLQQAR---QLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F + L+ +L +A LHS + F+ A LI Y+ GSV A+ VF +
Sbjct: 149 FTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGIL 208
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
+ I +W I+ V +GYFE ++++ MR GF P+ +T ++A LG+
Sbjct: 209 CK---DIVVWAGIVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDF 265
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
+ VH L+ + V L+ +Y +LG M DA ++F+ MP ++ W+ M++ +
Sbjct: 266 AKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQ 325
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
N C A +F RM PN T +S+L+ GC I
Sbjct: 326 NGFCNEAVDLFIRMREAFVVPNEFTLSSILN---------------------GCAIGK-- 362
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
C+ + E ++HG V+K G++ ++V NALID Y K + + A +F ++
Sbjct: 363 -------CSGLGE-----QLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELS 410
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
+KN +SW+ VI G+ + G G
Sbjct: 411 SKN----------------------------------------EVSWNTVIVGYENLGEG 430
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
++ +FR +V VTFS+ L CA LA+++LG ++HG A++ + V N L
Sbjct: 431 GKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSL 490
Query: 464 INMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDH 523
I+MY KCGD K VF+ +E D+ SWN+LISGY HGLG AL D M KP+
Sbjct: 491 IDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNG 550
Query: 524 VTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVR 583
+TF+ LS CS+AGL+ G+ F M+R+ IEP +EHY C+V LLGR+G L +A ++
Sbjct: 551 LTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDKAMKLIE 610
Query: 584 NMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWED 643
+P EP+ IW A+L++ + + +A +IL +N + +++L+SN+YA +W +
Sbjct: 611 GIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLVSNMYAGAKQWAN 670
Query: 644 SARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
A +R S K+ G+KK PG SWIE + V+ FS G H + + +LE L ++ Y
Sbjct: 671 VASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGMLEWLNMKATRAGY 730
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 147/367 (40%), Gaps = 77/367 (20%)
Query: 279 ISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNV 338
+ + A ++ C + ++ IH ++K G LF N L++ Y K DA N+
Sbjct: 47 LDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNL 106
Query: 339 FFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFA 398
F ++ +N S+ L YA C++ + +L + +GH+ L P+V +
Sbjct: 107 FDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHR--EGHE-LNPHVFT--------- 150
Query: 399 SKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNIL 458
L+LF + A++ P LH V+ D N
Sbjct: 151 ------SFLKLFVSLDKAEICP----------------------WLHSPIVKLGYDSNAF 182
Query: 459 VGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAG 518
VG LIN Y CG VF+ I +D++ W ++S Y +G +++L M AG
Sbjct: 183 VGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAG 242
Query: 519 MKPDHVTFVTALSACSHAGLVAAGRNLFYQMVRE-FRIEPTV-----EHYACLVDL---- 568
P++ TF TAL A G + + Q+++ + ++P V + Y L D+
Sbjct: 243 FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAF 302
Query: 569 --------------------LGRAGLLQEANDI---VRNMPIEPNEYIWGALLNSCRTHK 605
+ G EA D+ +R + PNE+ ++LN C K
Sbjct: 303 KVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGCAIGK 362
Query: 606 DTKIVEE 612
+ + E+
Sbjct: 363 CSGLGEQ 369
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 336 bits (861), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 198/625 (31%), Positives = 316/625 (50%), Gaps = 23/625 (3%)
Query: 83 IALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFF 142
IA A+ G ++ A++VF+ +P LD + WN+++ + G + AI ++ +R
Sbjct: 11 IASLAKSGRIASARQVFDGMP--ELDTVA-WNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 143 PDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQL 202
PD ++ I+ C+ LG+ R + + GF L V N L+ MYGK A ++
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKV 127
Query: 203 FDGM--PVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCG 260
F M R ++W +++ Y A +F M + + W ++S H CG
Sbjct: 128 FRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDVFVEMP----KRVAFAWNIMISGHAHCG 183
Query: 261 LYDETLELFKLMRTRGCEISAEALAVVISVC-ADVVEVDRSREIHGYVIKGGYEDYLFVK 319
+ L LFK M + + +++ C AD V R +H ++K G+ + K
Sbjct: 184 KLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAK 243
Query: 320 NALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDG 379
N+++ Y K DA I+ SWN++I + + G E+A V
Sbjct: 244 NSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVF--------- 294
Query: 380 HQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALN 439
H N+++W+ +I+G+ G GE++L F M + V + + VL C+ LA L
Sbjct: 295 HLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLG 354
Query: 440 LGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYG 499
G+ +HG + VGN L+N+Y KCGD K+ F +I +DL+SWN+++ +G
Sbjct: 355 HGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFG 414
Query: 500 MHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTV 559
+HGL D AL +D MI +G+KPD+VTF+ L+ CSH+GLV G +F MV+++RI V
Sbjct: 415 VHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEV 474
Query: 560 EHYACLVDLLGRAGLLQEANDIVRN----MPIEPNEYIWGALLNSCRTHKDTKIVEETAS 615
+H C++D+ GR G L EA D+ + N W LL +C TH T++ E +
Sbjct: 475 DHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSK 534
Query: 616 QILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFS 675
+ SF+LLSN+Y + GRW++ VR ++G+KKTPG SWIEV +V TF
Sbjct: 535 VLKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFV 594
Query: 676 AGNIVHLGLDEVYVILEELALQMAN 700
G+ H L+E+ L L +M N
Sbjct: 595 VGDSSHPRLEELSETLNCLQHEMRN 619
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 335 bits (858), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 214/728 (29%), Positives = 347/728 (47%), Gaps = 118/728 (16%)
Query: 45 DFFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPF 104
DFF ++ +++ Q H+Q IL L KL + G++ +A+ +F +V
Sbjct: 25 DFF----KRSTSISHLAQTHAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSV-- 78
Query: 105 ERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRK-FGFFPDGFTLPLIIEACSHLGSSSL 163
+R D + L+N ++R + ++ ++ +RK P+ T I A S
Sbjct: 79 QRPD-VFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRA 137
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
R++H A+ G + L + + +V MY K R+EDA ++FD MP + + WNTM+SGY
Sbjct: 138 GRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRK 197
Query: 224 NHDCVGASRIFKRM---------------------ELEDWR---------------PNSV 247
N V + ++F+ + EL++ R +
Sbjct: 198 NEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257
Query: 248 TWTSLLSSHKRCG-------LYDE------------------------TLELFKLMRTRG 276
T +S + +CG L+ E +L LFK + G
Sbjct: 258 VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317
Query: 277 CEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAH 336
+ + L ++ V ++ + IHGY +K + + V AL Y K + A
Sbjct: 318 ARLRSSTLVSLVPVSGHLMLI---YAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESAR 374
Query: 337 NVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISG 396
+F + K+L SWNA+IS Y ++GL E+A ++ +++KS
Sbjct: 375 KLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKS-------------------- 414
Query: 397 FASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDN 456
+ PN VT + +LS CA+L AL+LG+ +H + +
Sbjct: 415 --------------------EFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESS 454
Query: 457 ILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIK 516
I V LI MY KCG + +FD + ++ ++WN++ISGYG+HG G AL F EM+
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLN 514
Query: 517 AGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQ 576
+G+ P VTF+ L ACSHAGLV G +F M+ + EP+V+HYAC+VD+LGRAG LQ
Sbjct: 515 SGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQ 574
Query: 577 EANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYA 636
A + M IEP +W LL +CR HKDT + + ++ L+ G +LLSNI++
Sbjct: 575 RALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHS 634
Query: 637 ANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELAL 696
A+ + +A VR +AKK+ L K PG + IE+ + + F++G+ H + E+Y LE+L
Sbjct: 635 ADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEG 694
Query: 697 QMANENYE 704
+M Y+
Sbjct: 695 KMREAGYQ 702
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 105/226 (46%), Gaps = 17/226 (7%)
Query: 316 LFVKNALIDTYRKH---KHLGDAHN--VFFDIKNKNLESWNALISSYAESGLCEEAHAVL 370
L KN +D +++ HL H + +N ++ L ++ G A +
Sbjct: 17 LISKNTYLDFFKRSTSISHLAQTHAQIILHGFRN-DISLLTKLTQRLSDLGAIYYARDIF 75
Query: 371 LQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLA-KVKPNCVTFSTVL 429
L ++ RP+V ++ ++ GF+ SL +F ++ + +KPN T++ +
Sbjct: 76 LSVQ---------RPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAI 126
Query: 430 SVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLI 489
S + GR +HG AV + D +L+G+ ++ MY K + VFD + +D I
Sbjct: 127 SAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTI 186
Query: 490 SWNSLISGYGMHGLGDNALTTFDEMI-KAGMKPDHVTFVTALSACS 534
WN++ISGY + + ++ F ++I ++ + D T + L A +
Sbjct: 187 LWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVA 232
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 334 bits (857), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 204/666 (30%), Positives = 340/666 (51%), Gaps = 88/666 (13%)
Query: 44 EDF-FITLLQQCST---LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVF 99
+DF F +LL C+ L+ Q HS I + F+ L+ +YA+ G++ A+++F
Sbjct: 427 DDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIF 486
Query: 100 NAVPFERL---DHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACS 156
ER+ D++ WN+II + V A +++ M G DG L ++AC+
Sbjct: 487 -----ERMCDRDNVT-WNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACT 540
Query: 157 HLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNT 216
H+ + VHC +++ G LH + L+ MY K G ++DA ++F +P +++S N
Sbjct: 541 HVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNA 600
Query: 217 MVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRG 276
+++GY+ N+ +E + LF+ M TRG
Sbjct: 601 LIAGYSQNN------------------------------------LEEAVVLFQEMLTRG 624
Query: 277 CEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAH 336
S A ++ C + + HG + K G+ + ++LG
Sbjct: 625 VNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSS-------------EGEYLG--- 668
Query: 337 NVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISG 396
+L+ Y S EA A+ +L +++ W+ ++SG
Sbjct: 669 --------------ISLLGMYMNSRGMTEACALFSELSSP--------KSIVLWTGMMSG 706
Query: 397 FASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDN 456
+ G EE+L+ ++ M+ V P+ TF TVL VC+ L++L GR +H D +
Sbjct: 707 HSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLD 766
Query: 457 ILVGNGLINMYMKCGDFKKGHLVFDNIEGR-DLISWNSLISGYGMHGLGDNALTTFDEMI 515
L N LI+MY KCGD K VFD + R +++SWNSLI+GY +G ++AL FD M
Sbjct: 767 ELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMR 826
Query: 516 KAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLL 575
++ + PD +TF+ L+ACSHAG V+ GR +F M+ ++ IE V+H AC+VDLLGR G L
Sbjct: 827 QSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYL 886
Query: 576 QEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIY 635
QEA+D + ++P+ +W +LL +CR H D E +A +++ L Q + +++LLSNIY
Sbjct: 887 QEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIY 946
Query: 636 AANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELA 695
A+ G WE + +R + +G+KK PG SWI+V ++ + F+AG+ H + ++ + LE+L
Sbjct: 947 ASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEIGKIEMFLEDLY 1006
Query: 696 LQMANE 701
M ++
Sbjct: 1007 DLMKDD 1012
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 127/562 (22%), Positives = 243/562 (43%), Gaps = 76/562 (13%)
Query: 56 TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNS 115
L+ + +HS++++ + L ++ LYA+ VS+A+K F+ + + + WNS
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLEKD----VTAWNS 130
Query: 116 IIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELG 175
++ S G + +V + + FP+ FT +++ C+ + R +HC +++G
Sbjct: 131 MLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG 190
Query: 176 FRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFK 235
+ + LV MY K R+ DA ++F+ + + W + SGY A +F+
Sbjct: 191 LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFE 250
Query: 236 RMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRT---------------RGCEIS 280
RM E RP+ + + ++++++ R G + LF M + RGCE
Sbjct: 251 RMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETV 310
Query: 281 A----------------EALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALID 324
A L V+S V +D +H IK G ++V ++L+
Sbjct: 311 AIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370
Query: 325 TYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLR 384
Y K + + A VF ++ K
Sbjct: 371 MYSKCEKMEAAAKVFEALEEK--------------------------------------- 391
Query: 385 PNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGREL 444
N + W+A+I G+A G + +ELF M+ + + TF+++LS CA L +G +
Sbjct: 392 -NDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQF 450
Query: 445 HGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLG 504
H ++ + N+ VGN L++MY KCG + +F+ + RD ++WN++I Y
Sbjct: 451 HSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENE 510
Query: 505 DNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYAC 564
A F M G+ D + L AC+H + G+ + V+ ++ + +
Sbjct: 511 SEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVK-CGLDRDLHTGSS 569
Query: 565 LVDLLGRAGLLQEANDIVRNMP 586
L+D+ + G++++A + ++P
Sbjct: 570 LIDMYSKCGIIKDARKVFSSLP 591
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 205/464 (44%), Gaps = 68/464 (14%)
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
+ VH +L LG + + N +V +Y K ++ A + FD + + + +WN+M+S Y+
Sbjct: 80 KAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLSMYSSI 138
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
R F + PN T++
Sbjct: 139 GKPGKVLRSFVSLFENQIFPNKFTFS---------------------------------- 164
Query: 285 AVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN 344
+V+S CA V+ R+IH +IK G E + AL+D Y K + DA VF I +
Sbjct: 165 -IVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWIVD 223
Query: 345 KNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQP---------------------- 382
N W L S Y ++GL EEA V ++ +GH+P
Sbjct: 224 PNTVCWTCLFSGYVKAGLPEEAVLVFERMRD--EGHRPDHLAFVTVINTYIRLGKLKDAR 281
Query: 383 ------LRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELA 436
P+V++W+ +ISG +GC ++E F M+ + VK T +VLS +A
Sbjct: 282 LLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVA 341
Query: 437 ALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLIS 496
L+LG +H A++ + NI VG+ L++MY KC + VF+ +E ++ + WN++I
Sbjct: 342 NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIR 401
Query: 497 GYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIE 556
GY +G + F +M +G D TF + LS C+ + + G F+ ++ + ++
Sbjct: 402 GYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLA 460
Query: 557 PTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNS 600
+ LVD+ + G L++A I M + + W ++ S
Sbjct: 461 KNLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGS 503
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 3/163 (1%)
Query: 437 ALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLIS 496
AL +G+ +H ++ +D +GN ++++Y KC FD +E +D+ +WNS++S
Sbjct: 75 ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLS 133
Query: 497 GYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIE 556
Y G L +F + + + P+ TF LS C+ V GR + M++ +E
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK-MGLE 192
Query: 557 PTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLN 599
LVD+ + + +A + + ++PN W L +
Sbjct: 193 RNSYCGGALVDMYAKCDRISDARRVFEWI-VDPNTVCWTCLFS 234
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 330 bits (845), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 186/584 (31%), Positives = 293/584 (50%), Gaps = 77/584 (13%)
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL 172
WN +R F +I +Y M + G PD F+ P I+++C+ L + +HCH
Sbjct: 21 WNVRLRELAYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVT 80
Query: 173 ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILS--WNTMVSGYAFNHDCVGA 230
+ G V+ L+ MY K G + DA ++F+ P + LS +N ++SGY N A
Sbjct: 81 KGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDA 140
Query: 231 SRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISV 290
+ +F+RM+ +SVT L + +
Sbjct: 141 AYMFRRMKETGVSVDSVTMLGL-----------------------------------VPL 165
Query: 291 CADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESW 350
C + R +HG +KGG + + V N+ I Y K + +F ++ K L +W
Sbjct: 166 CTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITW 225
Query: 351 NALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELF 410
NA+IS Y+++GL + LEL+
Sbjct: 226 NAVISGYSQNGLAYDV----------------------------------------LELY 245
Query: 411 RRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKC 470
+M+ + V P+ T +VLS CA L A +G E+ N N+ V N I+MY +C
Sbjct: 246 EQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARC 305
Query: 471 GDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTAL 530
G+ K VFD + + L+SW ++I YGMHG+G+ L FD+MIK G++PD FV L
Sbjct: 306 GNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVL 365
Query: 531 SACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPN 590
SACSH+GL G LF M RE+++EP EHY+CLVDLLGRAG L EA + + +MP+EP+
Sbjct: 366 SACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPD 425
Query: 591 EYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRIS 650
+WGALL +C+ HK+ + E ++++ G ++L+SNIY+ + E R+R+
Sbjct: 426 GAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNIYSDSKNQEGIWRIRVM 485
Query: 651 AKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEEL 694
+++ +K PG S++E + +V+ F AG+ H +EV+ +L+EL
Sbjct: 486 MRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEVHRMLDEL 529
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 175/402 (43%), Gaps = 45/402 (11%)
Query: 47 FITLLQQCSTLQ---QARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F +L+ C++L +QLH +PF+ LI++Y + G V+ A+KVF P
Sbjct: 56 FPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENP 115
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
+ +N++I ++ A ++ M++ G D T+ ++ C+ L
Sbjct: 116 QSSQLSV-CYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWL 174
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
R +H ++ G + + V+N + MY K G +E +LFD MPV+ +++WN ++SGY+
Sbjct: 175 GRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQ 234
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
N ++++M+ P+ T S+LSS
Sbjct: 235 NGLAYDVLELYEQMKSSGVCPDPFTLVSVLSS---------------------------- 266
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
CA + E+ V G+ +FV NA I Y + +L A VF +
Sbjct: 267 -------CAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAVFDIMP 319
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
K+L SW A+I Y G+ E + + K + +RP+ + V+S + G
Sbjct: 320 VKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIK-----RGIRPDGAVFVMVLSACSHSGLT 374
Query: 404 EESLELFRRMQLA-KVKPNCVTFSTVLSVCAELAALNLGREL 444
++ LELFR M+ K++P +S ++ + L+ E
Sbjct: 375 DKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGRLDEAMEF 416
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 330 bits (845), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 190/573 (33%), Positives = 295/573 (51%), Gaps = 67/573 (11%)
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
R VH + R + + KL+ Y L + A ++FD +P R ++ N M+ Y N
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAE-- 282
G Y E +++F M GC + +
Sbjct: 119 -----------------------------------GFYGEGVKVFGTMC--GCNVRPDHY 141
Query: 283 ALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDI 342
V+ C+ + R+IHG K G LFV N L+ Y K L +A V ++
Sbjct: 142 TFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEM 201
Query: 343 KNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQP-----LRPNV---------- 387
+++ SWN+L+ YA++ ++A V ++E H L P V
Sbjct: 202 SRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMY 261
Query: 388 -------------ISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAE 434
+SW+ +I + E++EL+ RM+ +P+ V+ ++VL C +
Sbjct: 262 VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGD 321
Query: 435 LAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSL 494
+AL+LG+++HGY R + N+L+ N LI+MY KCG +K VF+N++ RD++SW ++
Sbjct: 322 TSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAM 381
Query: 495 ISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFR 554
IS YG G G +A+ F ++ +G+ PD + FVT L+ACSHAGL+ GR+ F M ++
Sbjct: 382 ISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYK 441
Query: 555 IEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETA 614
I P +EH AC+VDLLGRAG ++EA +++M +EPNE +WGALL +CR H DT I A
Sbjct: 442 ITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAA 501
Query: 615 SQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTF 674
++ L + +G ++LLSNIYA GRWE+ +R K KGLKK PG S +EV + ++TF
Sbjct: 502 DKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTF 561
Query: 675 SAGNIVHLGLDEVYVILEELALQMANENYELNS 707
G+ H DE+Y L+ L +M Y +S
Sbjct: 562 LVGDRSHPQSDEIYRELDVLVKKMKELGYVPDS 594
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 129/523 (24%), Positives = 236/523 (45%), Gaps = 92/523 (17%)
Query: 50 LLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDH 109
+L ++ R +HS+ IL L KL+ YA V+ A+KVF+ +P ER +
Sbjct: 48 VLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIP-ER--N 104
Query: 110 IPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHC 169
+ + N +IR+ V++G++ ++++ M PD +T P +++ACS G+ + R +H
Sbjct: 105 VIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHG 164
Query: 170 HALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVG 229
A ++G + L V N LV MYGK G + +A + D M R ++SWN++V GYA N
Sbjct: 165 SATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDD 224
Query: 230 ASRIFKRME----------------------------LEDW-----RPNSVTWTSLLSSH 256
A + + ME ++D + + V+W ++ +
Sbjct: 225 ALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVY 284
Query: 257 KRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYL 316
+ + E +EL+ M G E A ++ V+ C D + ++IHGY+ + L
Sbjct: 285 MKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNL 344
Query: 317 FVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKS 376
++NALID Y K L A +VF ++K++++ SW A+IS+Y
Sbjct: 345 LLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAY------------------- 385
Query: 377 LDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELA 436
GF+ +GC +++ LF ++Q + + P+ + F T L+ C+
Sbjct: 386 -------------------GFSGRGC--DAVALFSKLQDSGLVPDSIAFVTTLAACSHAG 424
Query: 437 ALNLGRELHGYAVRNLMDDNILVGNGL------INMYMKCGDFKKGHLVFDN--IEGRDL 488
L GR LM D+ + L +++ + G K+ + + +E +
Sbjct: 425 LLEEGRSCF-----KLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNER 479
Query: 489 ISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALS 531
+ W +L+ +H D L D++ + + P+ + LS
Sbjct: 480 V-WGALLGACRVHSDTDIGLLAADKLFQ--LAPEQSGYYVLLS 519
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 117/240 (48%), Gaps = 12/240 (5%)
Query: 313 EDYLFVKNALIDTYRKHKHLGDAHN-VFFDIKNKNLESWNALISSYAESGLCEEAHAVLL 371
++ +F+ ++DTY + L H+ + + N L+ +YA A V
Sbjct: 39 QETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFD 98
Query: 372 QLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSV 431
++ P R NVI + +I + + G E +++F M V+P+ TF VL
Sbjct: 99 EI--------PER-NVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKA 149
Query: 432 CAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISW 491
C+ + +GR++HG A + + + VGNGL++MY KCG + LV D + RD++SW
Sbjct: 150 CSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSW 209
Query: 492 NSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGL--VAAGRNLFYQM 549
NSL+ GY + D+AL EM + D T + L A S+ V +++F++M
Sbjct: 210 NSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFKM 269
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 328 bits (841), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 210/732 (28%), Positives = 359/732 (49%), Gaps = 93/732 (12%)
Query: 47 FITLLQQCSTLQQA---RQLHSQTILTAAYRKPFLAAKLIALYARFGSV-SHAQKVFNAV 102
F +L C L + + +HS I + + L+++YA+FG + A F+ +
Sbjct: 125 FAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGI 184
Query: 103 PFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSS 162
+ + WN+II + A + M K P+ T+ ++ C+ + +
Sbjct: 185 ADK---DVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNI 241
Query: 163 LCRI---VHCHALELGF-RNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMV 218
CR +H + ++ + + H+ V N LV Y ++GR+E+A LF M + ++SWN ++
Sbjct: 242 ACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVI 301
Query: 219 SGYAFNHDCVGASRIFKRMELE-DWRPNSVTWTS-------------------------- 251
+GYA N + A ++F + + D P+SVT S
Sbjct: 302 AGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSY 361
Query: 252 ----------LLSSHKRCGLYDETLELFKLMRTRGC------------------------ 277
L+S + R G F LM T+
Sbjct: 362 LLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLH 421
Query: 278 -----EISAEALAVV--ISVCADVVEVDRSREIHGYVIKGGY---EDYLFVKNALIDTYR 327
I+ +++ ++ + C +V + + +E+HGY +K G E+ + NAL+D Y
Sbjct: 422 HLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYA 481
Query: 328 KHKHLGDAHNVFFDI-KNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPN 386
K ++ AH +F + + + L S+N+L+S Y SG ++A + ++ + +
Sbjct: 482 KCGNVEYAHKIFLGLSERRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTT---------D 532
Query: 387 VISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHG 446
+ +WS ++ +A C E++ +FR +Q ++PN VT +L VCA+LA+L+L R+ HG
Sbjct: 533 LTTWSLMVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHG 592
Query: 447 YAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDN 506
Y +R + D L G L+++Y KCG K + VF + RDL+ + ++++GY +HG G
Sbjct: 593 YIIRGGLGDIRLKGT-LLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKE 651
Query: 507 ALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLV 566
AL + M ++ +KPDHV T L+AC HAGL+ G ++ + ++PT+E YAC V
Sbjct: 652 ALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAV 711
Query: 567 DLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITG 626
DL+ R G L +A V MP+EPN IWG LL +C T+ + A+ +L S TG
Sbjct: 712 DLIARGGRLDDAYSFVTQMPVEPNANIWGTLLRACTTYNRMDLGHSVANHLLQAESDDTG 771
Query: 627 SFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDE 686
+ +L+SN+YAA+ +WE +R KKK +KK G SW+EV + F +G+ H D
Sbjct: 772 NHVLISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDS 831
Query: 687 VYVILEELALQM 698
++ ++ L LQM
Sbjct: 832 IFDLVNALYLQM 843
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/420 (24%), Positives = 179/420 (42%), Gaps = 85/420 (20%)
Query: 140 GFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDA 199
GF D +++AC+ + + R +H +LG V ++ MY K RM+D
Sbjct: 16 GFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDC 75
Query: 200 CQLFDGMPVRTILSWNTMVSGYAFNHDCVGAS-RIFKRMELEDW-RPNSVTWTSLLSSHK 257
++F M + WN +++G + + C + R FK M D +P+SVT+
Sbjct: 76 QKMFRQMDSLDPVVWNIVLTGLSVS--CGRETMRFFKAMHFADEPKPSSVTF-------- 125
Query: 258 RCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLF 317
A+V+ +C + + + +H Y+IK G E
Sbjct: 126 ---------------------------AIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTL 158
Query: 318 VKNALIDTYRKHKHL-GDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKS 376
V NAL+ Y K + DA+ F I +K++ SWNA+I+ ++E+ + +A
Sbjct: 159 VGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADA---------- 208
Query: 377 LDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAEL- 435
F M +PN T + VL VCA +
Sbjct: 209 ------------------------------FRSFCLMLKEPTEPNYATIANVLPVCASMD 238
Query: 436 --AALNLGRELHGYAV-RNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWN 492
A GR++H Y V R+ + ++ V N L++ Y++ G ++ +F + +DL+SWN
Sbjct: 239 KNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWN 298
Query: 493 SLISGYGMHGLGDNALTTFDEMIKAG-MKPDHVTFVTALSACSHAGLVAAGRNLFYQMVR 551
+I+GY + A F ++ G + PD VT ++ L C+ +A+G+ + ++R
Sbjct: 299 VVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILR 358
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 137/304 (45%), Gaps = 46/304 (15%)
Query: 287 VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKN 346
V+ CA V ++ R +HG V K G+ V ++++ Y K + + D +F
Sbjct: 27 VVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMF------- 79
Query: 347 LESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEES 406
+ +D P + W+ V++G S CG E+
Sbjct: 80 ----------------------------RQMDSLDP-----VVWNIVLTGL-SVSCGRET 105
Query: 407 LELFRRMQLA-KVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLIN 465
+ F+ M A + KP+ VTF+ VL +C L G+ +H Y ++ ++ + LVGN L++
Sbjct: 106 MRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVS 165
Query: 466 MYMKCG-DFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHV 524
MY K G F + FD I +D++SWN++I+G+ + + +A +F M+K +P++
Sbjct: 166 MYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYA 225
Query: 525 TFVTALSACSHAG---LVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI 581
T L C+ +GR + +V+ ++ V LV R G ++EA +
Sbjct: 226 TIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRIEEAASL 285
Query: 582 VRNM 585
M
Sbjct: 286 FTRM 289
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 328 bits (840), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 208/671 (30%), Positives = 353/671 (52%), Gaps = 51/671 (7%)
Query: 57 LQQA----RQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPL 112
LQ+A RQ+ +++I++ ++A +I+ YA G +S A +VF+ +P
Sbjct: 66 LQEAEAIFRQMSNRSIVS------WIA--MISAYAENGKMSKAWQVFDEMPVRVTTS--- 114
Query: 113 WNSIIRANVSHGY-FEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHA 171
+N++I A + + A E++ + + + + +I G ++
Sbjct: 115 YNAMITAMIKNKCDLGKAYELFCDIPE----KNAVSYATMITGFVRAGRFDEAEFLYAET 170
Query: 172 LELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGAS 231
+ FR+ + N L+ Y + G+ +A ++F GM V+ ++S ++MV GY V A
Sbjct: 171 -PVKFRDSV-ASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSMVHGYCKMGRIVDAR 228
Query: 232 RIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRG-CEISAEALAVVISV 290
+F RM N +TWT+++ + + G +++ LF MR G ++++ LAV+
Sbjct: 229 SLFDRMT----ERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKA 284
Query: 291 CADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESW 350
C D V +IHG V + E LF+ N+L+ Y K ++G+A VF +KNK+ SW
Sbjct: 285 CRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSW 344
Query: 351 NALISSYAESGLCEEAHAVLLQLEKS-----------------------LDGHQPLRPNV 387
N+LI+ + EA+ + ++ L G P + N
Sbjct: 345 NSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDN- 403
Query: 388 ISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGY 447
I+W+A+IS F S G EE+L F +M +V PN TFS+VLS A LA L G ++HG
Sbjct: 404 ITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGR 463
Query: 448 AVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNA 507
V+ + +++ V N L++MY KCG+ + +F I +++S+N++ISGY +G G A
Sbjct: 464 VVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKA 523
Query: 508 LTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVD 567
L F + +G +P+ VTF+ LSAC H G V G F M + IEP +HYAC+VD
Sbjct: 524 LKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVD 583
Query: 568 LLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGS 627
LLGR+GLL +A++++ MP +P+ +WG+LL++ +TH + E A +++ L
Sbjct: 584 LLGRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATP 643
Query: 628 FMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEV 687
+++LS +Y+ G+ D R+ K K +KK PG SWI ++ +V+ F AG+ L L+E+
Sbjct: 644 YVVLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEI 703
Query: 688 YVILEELALQM 698
L+ + +M
Sbjct: 704 GFTLKMIRKEM 714
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 188/440 (42%), Gaps = 57/440 (12%)
Query: 184 NKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWR 243
N + + + G +++A +F M R+I+SW M+S YA N A ++F M +
Sbjct: 54 NSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEMPVRVTT 113
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREI 303
+ T+++ + +C L + ELF C+I + V + I
Sbjct: 114 SYNAMITAMIKN--KCDL-GKAYELF-------CDIPEKN------------AVSYATMI 151
Query: 304 HGYVIKGGYEDYLFV-------------KNALIDTYRKHKHLGDAHNVFFDIKNKNLESW 350
G+V G +++ F+ N L+ Y + +A VF + K + S
Sbjct: 152 TGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSC 211
Query: 351 NALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELF 410
++++ Y + G +A ++ ++ + NVI+W+A+I G+ G E+ LF
Sbjct: 212 SSMVHGYCKMGRIVDARSLFDRMTER---------NVITWTAMIDGYFKAGFFEDGFGLF 262
Query: 411 RRM-QLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMK 469
RM Q VK N T + + C + G ++HG R ++ ++ +GN L++MY K
Sbjct: 263 LRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSK 322
Query: 470 CGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTA 529
G + VF ++ +D +SWNSLI+G A F++M D V++
Sbjct: 323 LGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMP----GKDMVSWTDM 378
Query: 530 LSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM---P 586
+ S G ++ LF M + I + ++ G +EA M
Sbjct: 379 IKGFSGKGEISKCVELFGMMPEKDNIT-----WTAMISAFVSNGYYEEALCWFHKMLQKE 433
Query: 587 IEPNEYIWGALLNSCRTHKD 606
+ PN Y + ++L++ + D
Sbjct: 434 VCPNSYTFSSVLSATASLAD 453
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 137/290 (47%), Gaps = 27/290 (9%)
Query: 316 LFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEK 375
+F N+ I + ++ +L +A +F + N+++ SW A+IS+YAE+G +A V ++
Sbjct: 50 IFQCNSQISKHARNGNLQEAEAIFRQMSNRSIVSWIAMISAYAENGKMSKAWQVFDEM-- 107
Query: 376 SLDGHQPLRPNVISWSAVISGFASKGCG-EESLELFRRMQLAKVKPNCVTFSTVLSVCAE 434
P+R S++A+I+ C ++ ELF + + N V+++T+++
Sbjct: 108 ------PVRVTT-SYNAMITAMIKNKCDLGKAYELFCDIP----EKNAVSYATMITGFVR 156
Query: 435 LAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSL 494
+ L+ D + N L++ Y++ G + + VF + ++++S +S+
Sbjct: 157 AGRFDEAEFLYAETPVKFRDS--VASNVLLSGYLRAGKWNEAVRVFQGMAVKEVVSCSSM 214
Query: 495 ISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFR 554
+ GY G +A + FD M + + +T+ + AG G LF +M +E
Sbjct: 215 VHGYCKMGRIVDARSLFDRMTERNV----ITWTAMIDGYFKAGFFEDGFGLFLRMRQEGD 270
Query: 555 IEP-----TVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLN 599
++ V AC + R G + + +V MP+E + ++ +L++
Sbjct: 271 VKVNSNTLAVMFKACRDFVRYREG--SQIHGLVSRMPLEFDLFLGNSLMS 318
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 326 bits (836), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 166/464 (35%), Positives = 272/464 (58%), Gaps = 14/464 (3%)
Query: 230 ASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAE-ALAVVI 288
A+R+F ++ PN + S++ ++ LY + + ++K + + E+ +
Sbjct: 61 ATRLFNQVS----NPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMF 116
Query: 289 SVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE 348
CA + +++HG++ K G ++ +NALID Y K L DAH VF ++ +++
Sbjct: 117 KSCASLGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVI 176
Query: 349 SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLE 408
SWN+L+S YA G ++A + H L ++SW+A+ISG+ GC E+++
Sbjct: 177 SWNSLLSGYARLGQMKKAKGLF---------HLMLDKTIVSWTAMISGYTGIGCYVEAMD 227
Query: 409 LFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYM 468
FR MQLA ++P+ ++ +VL CA+L +L LG+ +H YA R V N LI MY
Sbjct: 228 FFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYS 287
Query: 469 KCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVT 528
KCG + +F +EG+D+ISW+++ISGY HG A+ TF+EM +A +KP+ +TF+
Sbjct: 288 KCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLG 347
Query: 529 ALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIE 588
LSACSH G+ G F M ++++IEP +EHY CL+D+L RAG L+ A +I + MP++
Sbjct: 348 LLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAGKLERAVEITKTMPMK 407
Query: 589 PNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVR 648
P+ IWG+LL+SCRT + + ++ L + G+++LL+NIYA G+WED +R+R
Sbjct: 408 PDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNYVLLANIYADLGKWEDVSRLR 467
Query: 649 ISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILE 692
+ + +KKTPG S IEV V F +G+ E+ ++L+
Sbjct: 468 KMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISIVLQ 511
Score = 174 bits (440), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 128/476 (26%), Positives = 220/476 (46%), Gaps = 50/476 (10%)
Query: 44 EDFFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
E++FI LQ+ + + +++++ I+ + F+ K++ + + +A ++FN V
Sbjct: 10 ENYFIPFLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVS 69
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGF-FPDGFTLPLIIEACSHLGSSS 162
++ L+NSIIRA + + I IY + + F PD FT P + ++C+ LGS
Sbjct: 70 NP---NVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCY 126
Query: 163 LCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYA 222
L + VH H + G R H+ N L+ MY K + DA ++FD M R ++SWN+++SGYA
Sbjct: 127 LGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYA 186
Query: 223 FNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAE 282
A +F M V+WT+++S + G Y E ++ F+ M+ G E
Sbjct: 187 RLGQMKKAKGLFHLM----LDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEI 242
Query: 283 ALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDI 342
+L V+ CA + ++ + IH Y + G+ V NALI+ Y K + A +F +
Sbjct: 243 SLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQM 302
Query: 343 KNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGC 402
+ K++ SW+ +IS YA G AH
Sbjct: 303 EGKDVISWSTMISGYAYHG---NAHG---------------------------------- 325
Query: 403 GEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNG 462
++E F MQ AKVKPN +TF +LS C+ + G ++ + + G
Sbjct: 326 ---AIETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYG 382
Query: 463 -LINMYMKCGDFKKGHLVFDNIEGR-DLISWNSLISGYGMHGLGDNALTTFDEMIK 516
LI++ + G ++ + + + D W SL+S G D AL D +++
Sbjct: 383 CLIDVLARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVE 438
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 326 bits (835), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 213/746 (28%), Positives = 356/746 (47%), Gaps = 110/746 (14%)
Query: 47 FITLLQQCSTLQQ---ARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F ++L+ +TL RQLH Q I + L+ Y + + +KVF+ +
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
ER ++ W ++I + + + +++ M+ G P+ FT + + G
Sbjct: 156 -ER--NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGR 212
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
VH ++ G + V N L+ +Y K G + A LFD V+++++WN+M+SGYA
Sbjct: 213 GLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAA 272
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTW---------------------------------- 249
N + A +F M L R + ++
Sbjct: 273 NGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNI 332
Query: 250 -TSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL------------------------ 284
T+L+ ++ +C + L LFK + G +S A+
Sbjct: 333 RTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKG 392
Query: 285 ----AVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFF 340
SV + V E+H V+K YE V AL+D Y K + +A VF
Sbjct: 393 VRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS 452
Query: 341 DIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASK 400
I +K++ +W+A+++ YA++G E A + +L K G +P
Sbjct: 453 GIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKG--GIKP------------------ 492
Query: 401 GCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAEL-AALNLGRELHGYAVRNLMDDNILV 459
N TFS++L+VCA A++ G++ HG+A+++ +D ++ V
Sbjct: 493 --------------------NEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCV 532
Query: 460 GNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGM 519
+ L+ MY K G+ + VF +DL+SWNS+ISGY HG AL F EM K +
Sbjct: 533 SSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKV 592
Query: 520 KPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAN 579
K D VTF+ +AC+HAGLV G F MVR+ +I PT EH +C+VDL RAG L++A
Sbjct: 593 KMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAM 652
Query: 580 DIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANG 639
++ NMP IW +L +CR HK T++ A +I+ + + + +++LLSN+YA +G
Sbjct: 653 KVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESG 712
Query: 640 RWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMA 699
W++ A+VR ++ +KK PG SWIEV+ K Y+F AG+ H D++Y+ LE+L+ ++
Sbjct: 713 DWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLK 772
Query: 700 NENYELNSCFNQECIYDQSELVLVAN 725
+ YE ++ + + I D+ + ++A
Sbjct: 773 DLGYEPDTSYVLQDIDDEHKEAVLAQ 798
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 127/589 (21%), Positives = 250/589 (42%), Gaps = 122/589 (20%)
Query: 89 FGSVS-----HAQKVFNAVP-FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFF 142
FG+VS +A +F+ P +R +I L R G + A +++ + + G
Sbjct: 35 FGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSR----DGRTQEAKRLFLNIHRLGME 90
Query: 143 PDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQL 202
D +++ + L R +HC ++ GF + + V LV Y K +D ++
Sbjct: 91 MDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKV 150
Query: 203 FDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWT------------ 250
FD M R +++W T++SGYA N +F RM+ E +PNS T+
Sbjct: 151 FDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVG 210
Query: 251 -----------------------SLLSSHKRCG-------LYDET--------------- 265
SL++ + +CG L+D+T
Sbjct: 211 GRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGY 270
Query: 266 ---------LELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYL 316
L +F MR +S + A VI +CA++ E+ + ++H V+K G+
Sbjct: 271 AANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQ 330
Query: 317 FVKNALIDTYRKHKHLGDAHNVFFDIK-NKNLESWNALISSYAESGLCEEAHAVLLQLEK 375
++ AL+ Y K + DA +F +I N+ SW A+IS + ++ EEA + ++++
Sbjct: 331 NIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKR 390
Query: 376 SLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAEL 435
+ +RPN ++S +++ L + P+
Sbjct: 391 -----KGVRPNEFTYSVILTA------------------LPVISPS-------------- 413
Query: 436 AALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLI 495
E+H V+ + + VG L++ Y+K G ++ VF I+ +D+++W++++
Sbjct: 414 -------EVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAML 466
Query: 496 SGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRI 555
+GY G + A+ F E+ K G+KP+ TF + L+ C+ F+ + R+
Sbjct: 467 AGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRL 526
Query: 556 EPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTH 604
+ ++ + L+ + + G ++ A ++ + E + W ++++ H
Sbjct: 527 DSSLCVSSALLTMYAKKGNIESAEEVFKRQR-EKDLVSWNSMISGYAQH 574
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 201/460 (43%), Gaps = 87/460 (18%)
Query: 228 VGASRIFKRMELEDWRP--NSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALA 285
V +SR++ L D P + ++ SLL R G E LF + G E+ +
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 286 VVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK 345
V+ V A + + R++H IK G+ D + V +L+DTY K + D VF ++K +
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 346 NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEE 405
N+ +W LIS YA + + +E + ++++ ++ +PN +++A + A +G G
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQ-----NEGTQPNSFTFAAALGVLAEEGVGGR 212
Query: 406 SLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLIN 465
L ++H V+N +D I V N LIN
Sbjct: 213 GL-----------------------------------QVHTVVVKNGLDKTIPVSNSLIN 237
Query: 466 MYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVT 525
+Y+KCG+ +K ++FD E + +++WNS+ISGY +GL AL F M ++ +
Sbjct: 238 LYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESS 297
Query: 526 FVTALSACS-----------HAGLVAAGRNLFYQMVREFRIEPTVEHYACL--------V 566
F + + C+ H +V G LF Q +R + + A L +
Sbjct: 298 FASVIKLCANLKELRFTEQLHCSVVKYGF-LFDQNIRTALMVAYSKCTAMLDALRLFKEI 356
Query: 567 DLLGR--------AGLLQ-----EANDIVRNMP---IEPNEYIWGALLNSCRTHKDTKIV 610
+G +G LQ EA D+ M + PNE+ + +L + +
Sbjct: 357 GCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALPVISPS--- 413
Query: 611 EETASQILTLN---SQITGSFMLLSNIYAANGRWEDSARV 647
E +Q++ N S G+ +L + Y G+ E++A+V
Sbjct: 414 -EVHAQVVKTNYERSSTVGTALL--DAYVKLGKVEEAAKV 450
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 325 bits (834), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 177/562 (31%), Positives = 294/562 (52%), Gaps = 45/562 (8%)
Query: 143 PDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQL 202
P T +I+ CS + + VH H GF + + N+L+ MY K G + DA ++
Sbjct: 83 PPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 203 FDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLY 262
FD MP R + SWN MV+GYA A ++F M +D S +WT++++ + +
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKD----SYSWTAMVTGYVKKDQP 198
Query: 263 DETLELFKLM-RTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNA 321
+E L L+ LM R + +++ ++ A V + R +EIHG++++ G + + ++
Sbjct: 199 EEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSS 258
Query: 322 LIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQ 381
L+D Y K + +A N+F I K++ SW ++I Y +S E ++ +L S +
Sbjct: 259 LMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCE--- 315
Query: 382 PLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLG 441
+PN TF+ VL+ CA+L LG
Sbjct: 316 -------------------------------------RPNEYTFAGVLNACADLTTEELG 338
Query: 442 RELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMH 501
+++HGY R D + L++MY KCG+ + V D DL+SW SLI G +
Sbjct: 339 KQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQN 398
Query: 502 GLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEH 561
G D AL FD ++K+G KPDHVTFV LSAC+HAGLV G FY + + R+ T +H
Sbjct: 399 GQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDH 458
Query: 562 YACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLN 621
Y CLVDLL R+G ++ ++ MP++P++++W ++L C T+ + + EE A ++ +
Sbjct: 459 YTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIE 518
Query: 622 SQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVH 681
+ +++ ++NIYAA G+WE+ ++R ++ G+ K PG SW E+++K + F A + H
Sbjct: 519 PENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAADTSH 578
Query: 682 LGLDEVYVILEELALQMANENY 703
+++ L EL +M E Y
Sbjct: 579 PMYNQIVEFLRELRKKMKEEGY 600
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 100/213 (46%), Gaps = 3/213 (1%)
Query: 57 LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSI 116
+++ +++H + L + L+ +Y + G + A+ +F+ + E+ + W S+
Sbjct: 234 IRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI-VEK--DVVSWTSM 290
Query: 117 IRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGF 176
I + ++ + P+ +T ++ AC+ L + L + VH + +GF
Sbjct: 291 IDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGF 350
Query: 177 RNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKR 236
+ + LV MY K G +E A + DG P ++SW +++ G A N A + F
Sbjct: 351 DPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDL 410
Query: 237 MELEDWRPNSVTWTSLLSSHKRCGLYDETLELF 269
+ +P+ VT+ ++LS+ GL ++ LE F
Sbjct: 411 LLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFF 443
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Query: 402 CGE----ESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNI 457
CG+ E+++L R + KP T+ ++ VC++ AL G+++H + + I
Sbjct: 65 CGQKLLREAVQLLGRAK----KPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGI 120
Query: 458 LVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIK 516
++ N L+ MY KCG VFD + RDL SWN +++GY GL + A FDEM +
Sbjct: 121 VIWNRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTE 179
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 324 bits (831), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 211/685 (30%), Positives = 345/685 (50%), Gaps = 76/685 (11%)
Query: 47 FITLLQQCSTL------QQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFN 100
++++ CS L +Q+H+ L F+ L+A+Y + G ++ ++ +
Sbjct: 202 LVSVVTACSNLPMPEGLMMGKQVHAYG-LRKGELNSFIINTLVAMYGKLGKLASSKVLLG 260
Query: 101 AVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGS 160
+ F D + WN+++ + + A+E M G PD FT+ ++ ACSHL
Sbjct: 261 S--FGGRDLVT-WNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEM 317
Query: 161 SSLCRIVHCHALELG-FRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVS 219
+ +H +AL+ G + V + LV MY ++ ++FDGM R I WN M++
Sbjct: 318 LRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIA 377
Query: 220 GYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEI 279
GY+ N A +F ME + G
Sbjct: 378 GYSQNEHDKEALLLFIGME----------------------------------ESAGLLA 403
Query: 280 SAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVF 339
++ +A V+ C R IHG+V+K G + FV+N L+D Y + + A +F
Sbjct: 404 NSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIF 463
Query: 340 FDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFAS 399
+++++L +WN +I+ Y S E+A LL L K Q L V S
Sbjct: 464 GKMEDRDLVTWNTMITGYVFSEHHEDA---LLLLHK----MQNLERKV-----------S 505
Query: 400 KGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILV 459
KG SL KPN +T T+L CA L+AL G+E+H YA++N + ++ V
Sbjct: 506 KGASRVSL-----------KPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAV 554
Query: 460 GNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGM 519
G+ L++MY KCG + VFD I +++I+WN +I YGMHG G A+ M+ G+
Sbjct: 555 GSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGV 614
Query: 520 KPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAN 579
KP+ VTF++ +ACSH+G+V G +FY M ++ +EP+ +HYAC+VDLLGRAG ++EA
Sbjct: 615 KPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAY 674
Query: 580 DIVRNMPIEPNEY-IWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAAN 638
++ MP + N+ W +LL + R H + +I E A ++ L + ++LL+NIY++
Sbjct: 675 QLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSA 734
Query: 639 GRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQM 698
G W+ + VR + K++G++K PG SWIE +V+ F AG+ H +++ LE L +M
Sbjct: 735 GLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERM 794
Query: 699 ANENYELN-SCFNQECIYDQSELVL 722
E Y + SC D+ E++L
Sbjct: 795 RKEGYVPDTSCVLHNVEEDEKEILL 819
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 135/577 (23%), Positives = 244/577 (42%), Gaps = 99/577 (17%)
Query: 47 FITLLQQCSTLQQ---ARQLHSQTI-LTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAV 102
F LL+ + LQ +Q+H+ +A L+ LY + G KVF+ +
Sbjct: 100 FPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI 159
Query: 103 PFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSS 162
ER + + WNS+I + S +E A+E + M P FTL ++ ACS+L
Sbjct: 160 S-ER-NQVS-WNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPE 216
Query: 163 ---LCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVS 219
+ + VH + L G N ++N LV MYGKLG++ + L R +++WNT++S
Sbjct: 217 GLMMGKQVHAYGLRKGELNSF-IINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLS 275
Query: 220 GYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEI 279
N + A + M LE P+ T +S+L +
Sbjct: 276 SLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPA------------------------ 311
Query: 280 SAEALAVVISVCADVVEVDRSREIHGYVIK-GGYEDYLFVKNALIDTYRKHKHLGDAHNV 338
C+ + + +E+H Y +K G ++ FV +AL+D Y K + V
Sbjct: 312 -----------CSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRV 360
Query: 339 FFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFA 398
F + ++ + WNA+I+ Y+++ +EA + + +E+S
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEES---------------------- 398
Query: 399 SKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNIL 458
A + N T + V+ C A + +HG+ V+ +D +
Sbjct: 399 -----------------AGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRF 441
Query: 459 VGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEM---- 514
V N L++MY + G +F +E RDL++WN++I+GY ++AL +M
Sbjct: 442 VQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLE 501
Query: 515 -------IKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVD 567
+ +KP+ +T +T L +C+ +A G+ + ++ + V + LVD
Sbjct: 502 RKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKN-NLATDVAVGSALVD 560
Query: 568 LLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTH 604
+ + G LQ + + +P + N W ++ + H
Sbjct: 561 MYAKCGCLQMSRKVFDQIP-QKNVITWNVIIMAYGMH 596
Score = 145 bits (366), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 111/431 (25%), Positives = 184/431 (42%), Gaps = 82/431 (19%)
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL 172
W ++R+ V A+ YV M G PD + P +++A + L L + +H H
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 173 ELGFR-NHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGAS 231
+ G+ + + V N LV +Y K G ++FD + R +SWN+++S
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLIS------------ 172
Query: 232 RIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVC 291
SL S K ++ LE F+ M E S+ L V++ C
Sbjct: 173 -------------------SLCSFEK----WEMALEAFRCMLDENVEPSSFTLVSVVTAC 209
Query: 292 ADVVEVD---RSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE 348
+++ + +++H Y ++ G E F+ N L+ Y K L + + ++L
Sbjct: 210 SNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLV 268
Query: 349 SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLE 408
+WN ++SS LC+ + E+LE
Sbjct: 269 TWNTVLSS-----LCQNEQLL-----------------------------------EALE 288
Query: 409 LFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRN-LMDDNILVGNGLINMY 467
R M L V+P+ T S+VL C+ L L G+ELH YA++N +D+N VG+ L++MY
Sbjct: 289 YLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMY 348
Query: 468 MKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIK-AGMKPDHVTF 526
C G VFD + R + WN++I+GY + AL F M + AG+ + T
Sbjct: 349 CNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTM 408
Query: 527 VTALSACSHAG 537
+ AC +G
Sbjct: 409 AGVVPACVRSG 419
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 324 bits (831), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 199/631 (31%), Positives = 312/631 (49%), Gaps = 87/631 (13%)
Query: 77 FLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGM 136
++ + LI +Y + G + A ++F+ + E+ D I W+S++ +G A+E + M
Sbjct: 97 YVGSSLIYMYIKCGRMIEALRMFDEL--EKPD-IVTWSSMVSGFEKNGSPYQAVEFFRRM 153
Query: 137 -RKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGR 195
PD TL ++ AC+ L +S L R VH + GF N L +VN L+ Y K
Sbjct: 154 VMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRA 213
Query: 196 MEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSS 255
++A LF + + ++S W+++++
Sbjct: 214 FKEAVNLFKMIAEKDVIS-----------------------------------WSTVIAC 238
Query: 256 HKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDY 315
+ + G E L +F M G E + + V+ CA ++++ R+ H I+ G E
Sbjct: 239 YVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETE 298
Query: 316 LFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLC---EEAHAVLLQ 372
+ V AL+D Y K C EEA+AV +
Sbjct: 299 VKVSTALVDMYMK----------------------------------CFSPEEAYAVFSR 324
Query: 373 LEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAK-VKPNCVTFSTVLSV 431
+ R +V+SW A+ISGF G S+E F M L +P+ + VL
Sbjct: 325 IP---------RKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGS 375
Query: 432 CAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISW 491
C+EL L + H Y ++ D N +G L+ +Y +CG VF+ I +D + W
Sbjct: 376 CSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVW 435
Query: 492 NSLISGYGMHGLGDNALTTFDEMIKAG-MKPDHVTFVTALSACSHAGLVAAGRNLFYQMV 550
SLI+GYG+HG G AL TF+ M+K+ +KP+ VTF++ LSACSHAGL+ G +F MV
Sbjct: 436 TSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMV 495
Query: 551 REFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIV 610
++R+ P +EHYA LVDLLGR G L A +I + MP P I G LL +CR H++ ++
Sbjct: 496 NDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGTLLGACRIHQNGEMA 555
Query: 611 EETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKK 670
E A ++ L S G +ML+SN+Y G WE+ ++R S K++G+KK +S IE+R+K
Sbjct: 556 ETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRK 615
Query: 671 VYTFSAGNIVHLGLDEVYVILEELALQMANE 701
V+ F A + +H + VY +L+EL L M +
Sbjct: 616 VHRFVADDELHPEKEPVYGLLKELDLHMKED 646
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 168/352 (47%), Gaps = 42/352 (11%)
Query: 249 WTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVI 308
W +LL S R ++E L F M + L V + C ++ EV+ IHG+V
Sbjct: 28 WNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKACGELREVNYGEMIHGFV- 86
Query: 309 KGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHA 368
+K LG +L ++LI Y + G EA
Sbjct: 87 ------------------KKDVTLGS-----------DLYVGSSLIYMYIKCGRMIEALR 117
Query: 369 VLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAK-VKPNCVTFST 427
+ +LEK P++++WS+++SGF G +++E FRRM +A V P+ VT T
Sbjct: 118 MFDELEK---------PDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLIT 168
Query: 428 VLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRD 487
++S C +L+ LGR +HG+ +R +++ + N L+N Y K FK+ +F I +D
Sbjct: 169 LVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKD 228
Query: 488 LISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFY 547
+ISW+++I+ Y +G AL F++M+ G +P+ T + L AC+ A + GR
Sbjct: 229 VISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHE 288
Query: 548 QMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLN 599
+R+ +E V+ LVD+ + +EA + +P + W AL++
Sbjct: 289 LAIRK-GLETEVKVSTALVDMYMKCFSPEEAYAVFSRIP-RKDVVSWVALIS 338
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/403 (22%), Positives = 172/403 (42%), Gaps = 47/403 (11%)
Query: 47 FITLLQQCSTLQQARQ---LHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
ITL+ C+ L +R +H I L L+ YA+ + A +F +
Sbjct: 166 LITLVSACTKLSNSRLGRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIA 225
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
+ + W+++I V +G A+ ++ M G P+ T+ +++AC+
Sbjct: 226 EK---DVISWSTVIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQ 282
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
R H A+ G + V LV MY K E+A +F +P + ++SW ++SG+
Sbjct: 283 GRKTHELAIRKGLETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTL 342
Query: 224 NHDCVGASRIFKRMELE-DWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAE 282
N + F M LE + RP+++ +L S
Sbjct: 343 NGMAHRSIEEFSIMLLENNTRPDAILMVKVLGS--------------------------- 375
Query: 283 ALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDI 342
C+++ +++++ H YVIK G++ F+ +L++ Y + LG+A VF I
Sbjct: 376 --------CSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGI 427
Query: 343 KNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGC 402
K+ W +LI+ Y G +A + KS ++PN +++ +++S + G
Sbjct: 428 ALKDTVVWTSLITGYGIHGKGTKALETFNHMVKS----SEVKPNEVTFLSILSACSHAGL 483
Query: 403 GEESLELFRRM-QLAKVKPNCVTFSTVLSVCAELAALNLGREL 444
E L +F+ M ++ PN ++ ++ + + L+ E+
Sbjct: 484 IHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEI 526
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 92/178 (51%), Gaps = 6/178 (3%)
Query: 372 QLEKSLDGHQPL----RPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFST 427
+ S+D Q + ++ W+ ++ + + EE L F M + KP+ T
Sbjct: 6 KFSSSVDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPV 65
Query: 428 VLSVCAELAALNLGRELHGYAVRNL-MDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGR 486
L C EL +N G +HG+ +++ + ++ VG+ LI MY+KCG + +FD +E
Sbjct: 66 ALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKP 125
Query: 487 DLISWNSLISGYGMHGLGDNALTTFDEMIKAG-MKPDHVTFVTALSACSHAGLVAAGR 543
D+++W+S++SG+ +G A+ F M+ A + PD VT +T +SAC+ GR
Sbjct: 126 DIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGR 183
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 323 bits (828), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 197/650 (30%), Positives = 321/650 (49%), Gaps = 78/650 (12%)
Query: 49 TLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLD 108
TL+ T+ +Q+H I + FL L+ F ++ +F+ F
Sbjct: 18 TLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFP--- 74
Query: 109 HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVH 168
+I L+NS+I V++ F +++++ +RK G + GFT PL+++AC+ S L +H
Sbjct: 75 NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLH 134
Query: 169 CHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCV 228
++ GF + + + L+ +Y GR+ DA +LFD +P R++
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSV----------------- 177
Query: 229 GASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVI 288
VTWT+L S + G + E ++LFK M G + + + V+
Sbjct: 178 ------------------VTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVL 219
Query: 289 SVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE 348
S C V ++D I Y+ E+ KN+ + T
Sbjct: 220 SACVHVGDLDSGEWIVKYM-----EEMEMQKNSFVRT----------------------- 251
Query: 349 SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLE 408
L++ YA+ G E+A +V + + ++++WS +I G+AS +E +E
Sbjct: 252 ---TLVNLYAKCGKMEKARSVFDSM---------VEKDIVTWSTMIQGYASNSFPKEGIE 299
Query: 409 LFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYM 468
LF +M +KP+ + LS CA L AL+LG R+ N+ + N LI+MY
Sbjct: 300 LFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYA 359
Query: 469 KCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVT 528
KCG +G VF ++ +D++ N+ ISG +G + F + K G+ PD TF+
Sbjct: 360 KCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLG 419
Query: 529 ALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIE 588
L C HAGL+ G F + + ++ TVEHY C+VDL GRAG+L +A ++ +MP+
Sbjct: 420 LLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMR 479
Query: 589 PNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVR 648
PN +WGALL+ CR KDT++ E +++ L G+++ LSNIY+ GRW+++A VR
Sbjct: 480 PNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVR 539
Query: 649 ISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQM 698
KKG+KK PG SWIE+ KV+ F A + H D++Y LE+L +M
Sbjct: 540 DMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEM 589
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 323 bits (828), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 217/695 (31%), Positives = 353/695 (50%), Gaps = 56/695 (8%)
Query: 47 FITLLQQCS----TLQQARQLHSQTILTAAYRKPFLAAK-LIALYARFGSVSHAQKVFNA 101
++LL++C+ +L++ + +H Q ILT R+ + K LI +Y A+ VF
Sbjct: 6 LLSLLRECTNSTKSLRRIKLVH-QRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFE- 63
Query: 102 VPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGF-FPDGFTLPLIIEACSHLGS 160
F+ + +WNS++ + F +E++ + PD FT P +I+A LG
Sbjct: 64 -NFDIRSDVYIWNSLMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGR 122
Query: 161 SSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSG 220
L R++H ++ G+ + V + LVGMY K E++ Q+FD MP R + SWNT++S
Sbjct: 123 EFLGRMIHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISC 182
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEIS 280
+ + + A +F RME + PNSV+ T +S+ R + E+ + +G E+
Sbjct: 183 FYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELD 242
Query: 281 A---EALAVVISVCADVVEVDR--------------SREIHGYVIKGGYEDYLFVKNALI 323
AL + C D +EV R + I GYV KG + + + N +I
Sbjct: 243 EYVNSALVDMYGKC-DCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMI 301
Query: 324 ------------------DTYRKHKHLGDAHN-VFFDIKNKNLESWNALISSYAESGLCE 364
R H H V + N ++ +LI Y + G
Sbjct: 302 IEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEAN 361
Query: 365 EAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVT 424
A V + +K + SW+ +IS + S G +++E++ +M VKP+ VT
Sbjct: 362 LAETVFSKTQKDV---------AESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVVT 412
Query: 425 FSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIE 484
F++VL C++LAAL G+++H + ++ + L+ + L++MY KCG+ K+ +F++I
Sbjct: 413 FTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP 472
Query: 485 GRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRN 544
+D++SW +IS YG HG AL FDEM K G+KPD VT + LSAC HAGL+ G
Sbjct: 473 KKDVVSWTVMISAYGSHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLK 532
Query: 545 LFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMP-IEPNEYIWGALLNSCRT 603
F QM ++ IEP +EHY+C++D+LGRAG L EA +I++ P N + L ++C
Sbjct: 533 FFSQMRSKYGIEPIIEHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCL 592
Query: 604 HKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQS 663
H + + + A ++ ++M+L N+YA+ W+ + RVR+ K+ GL+K PG S
Sbjct: 593 HLEHSLGDRIARLLVENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCS 652
Query: 664 WIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQM 698
WIE+ KV F A + HL + VY L L+ M
Sbjct: 653 WIEMSDKVCHFFAEDRSHLRAENVYECLALLSGHM 687
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 323 bits (828), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 195/596 (32%), Positives = 295/596 (49%), Gaps = 85/596 (14%)
Query: 114 NSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALE 173
N +I++ G + AI + P T L+I C H S S VH H L+
Sbjct: 50 NQLIQSLCKEGKLKQAIRVLSQESS----PSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 174 LGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRI 233
G + KL+GMY LG ++ A ++FD RTI WN +
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNAL---------------- 149
Query: 234 FKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCA- 292
F+ + L G +E L L+ M G E V+ C
Sbjct: 150 FRALTL-------------------AGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVA 190
Query: 293 ---DVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLES 349
V + + +EIH ++ + GY ++++ L+D Y + + A VF
Sbjct: 191 SECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVF---------- 240
Query: 350 WNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLEL 409
G P+R NV+SWSA+I+ +A G E+L
Sbjct: 241 -----------------------------GGMPVR-NVVSWSAMIACYAKNGKAFEALRT 270
Query: 410 FRRM--QLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMY 467
FR M + PN VT +VL CA LAAL G+ +HGY +R +D + V + L+ MY
Sbjct: 271 FREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMY 330
Query: 468 MKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFV 527
+CG + G VFD + RD++SWNSLIS YG+HG G A+ F+EM+ G P VTFV
Sbjct: 331 GRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFV 390
Query: 528 TALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPI 587
+ L ACSH GLV G+ LF M R+ I+P +EHYAC+VDLLGRA L EA +V++M
Sbjct: 391 SVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRT 450
Query: 588 EPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARV 647
EP +WG+LL SCR H + ++ E + ++ L + G+++LL++IYA W++ RV
Sbjct: 451 EPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRV 510
Query: 648 RISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
+ + +GL+K PG+ W+EVR+K+Y+F + + + +++++ L +LA M + Y
Sbjct: 511 KKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGY 566
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 179/369 (48%), Gaps = 57/369 (15%)
Query: 55 STLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWN 114
S+L A ++H + + + PFLA KLI +Y+ GSV +A+KVF+ R I +WN
Sbjct: 91 SSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKT---RKRTIYVWN 147
Query: 115 SIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRI-------- 166
++ RA G+ E + +Y M + G D FT +++AC +S C +
Sbjct: 148 ALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKAC----VASECTVNHLMKGKE 203
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHD 226
+H H G+ +H++++ LV MY + G ++ A +F GMPVR ++SW+ M++ YA N
Sbjct: 204 IHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGK 263
Query: 227 CVGASRIFKRM--ELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
A R F+ M E +D PNSVT S+L +
Sbjct: 264 AFEALRTFREMMRETKDSSPNSVTMVSVLQA----------------------------- 294
Query: 285 AVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN 344
CA + +++ + IHGY+++ G + L V +AL+ Y + L VF + +
Sbjct: 295 ------CASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHD 348
Query: 345 KNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGE 404
+++ SWN+LISSY G ++A + ++ + P +++ +V+ + +G E
Sbjct: 349 RDVVSWNSLISSYGVHGYGKKAIQIFEEMLAN-----GASPTPVTFVSVLGACSHEGLVE 403
Query: 405 ESLELFRRM 413
E LF M
Sbjct: 404 EGKRLFETM 412
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 155/324 (47%), Gaps = 12/324 (3%)
Query: 57 LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSI 116
L + +++H+ ++ L+ +YARFG V +A VF +P + ++ W+++
Sbjct: 198 LMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMP---VRNVVSWSAM 254
Query: 117 IRANVSHGYFEFAIEIYVGMRK--FGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALEL 174
I +G A+ + M + P+ T+ +++AC+ L + +++H + L
Sbjct: 255 IACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRR 314
Query: 175 GFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIF 234
G + L V++ LV MYG+ G++E ++FD M R ++SWN+++S Y + A +IF
Sbjct: 315 GLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIF 374
Query: 235 KRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLM-RTRGCEISAEALAVVISVCAD 293
+ M P VT+ S+L + GL +E LF+ M R G + E A ++ +
Sbjct: 375 EEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGR 434
Query: 294 VVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNV---FFDIKNKNLESW 350
+D + ++ V E V +L+ + R H ++ A F ++ KN ++
Sbjct: 435 ANRLDEAAKM---VQDMRTEPGPKVWGSLLGSCRIHGNVELAERASRRLFALEPKNAGNY 491
Query: 351 NALISSYAESGLCEEAHAVLLQLE 374
L YAE+ + +E V LE
Sbjct: 492 VLLADIYAEAQMWDEVKRVKKLLE 515
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 322 bits (824), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 201/661 (30%), Positives = 327/661 (49%), Gaps = 85/661 (12%)
Query: 47 FITLLQQC---STLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F ++++ C S + +QLH+Q I + LIA+Y RF +S A +VF +P
Sbjct: 171 FGSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIP 230
Query: 104 FERLDHIPLWNSIIRANVSHGYFEF-AIEIYVGMRKFGFF-PDGFTLPLIIEACSHLGSS 161
+ L W+SII A S FEF A+ M FG F P+ + ++ACS L
Sbjct: 231 MKDLIS---WSSII-AGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRP 286
Query: 162 SLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGY 221
+H ++ + L MY + G +
Sbjct: 287 DYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLN------------------------ 322
Query: 222 AFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISA 281
A R+F ++E RP++ +W +++ G DE + +F MR+ G A
Sbjct: 323 -------SARRVFDQIE----RPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFIPDA 371
Query: 282 EALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFD 341
+L ++ + + + +IH Y+IK G+ L V N+L+ Y L N+F D
Sbjct: 372 ISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFNLFED 431
Query: 342 IKNK-NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASK 400
+N + SWN ++++ L QP+
Sbjct: 432 FRNNADSVSWNTILTA-------------------CLQHEQPV----------------- 455
Query: 401 GCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVG 460
E L LF+ M +++ +P+ +T +L C E+++L LG ++H Y+++ + +
Sbjct: 456 ----EMLRLFKLMLVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIK 511
Query: 461 NGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMK 520
NGLI+MY KCG + +FD+++ RD++SW++LI GY G G+ AL F EM AG++
Sbjct: 512 NGLIDMYAKCGSLGQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIE 571
Query: 521 PDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAND 580
P+HVTFV L+ACSH GLV G L+ M E I PT EH +C+VDLL RAG L EA
Sbjct: 572 PNHVTFVGVLTACSHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAER 631
Query: 581 IVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGR 640
+ M +EP+ +W LL++C+T + + ++ A IL ++ + + +LL +++A++G
Sbjct: 632 FIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGN 691
Query: 641 WEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMAN 700
WE++A +R S KK +KK PGQSWIE+ K++ F A +I H D++Y +L + QM +
Sbjct: 692 WENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLD 751
Query: 701 E 701
E
Sbjct: 752 E 752
Score = 159 bits (401), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 125/481 (25%), Positives = 208/481 (43%), Gaps = 92/481 (19%)
Query: 80 AKLIALYARFGSVSHAQ-----KVFNAVPFERL--DHIPLWNSIIRANVSHGYFEFAIEI 132
A ++ L AR SVS++Q V + + E L DHI NS+ ++N ++ A+E
Sbjct: 2 ATMLRLGARV-SVSNSQILATSSVVSTIKTEELMNDHI---NSLCKSN----FYREALEA 53
Query: 133 YVGMRKFGFFPDGF-TLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYG 191
+ +K F T +I ACS S + R +H H L + + N ++ MYG
Sbjct: 54 FDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYG 113
Query: 192 KLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTS 251
K G + DA ++FD MP R ++S+ ++++GY+ N A R++ +M ED P+ + S
Sbjct: 114 KCGSLRDAREVFDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGS 173
Query: 252 LLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGG 311
+I CA +V +++H VIK
Sbjct: 174 -----------------------------------IIKACASSSDVGLGKQLHAQVIKLE 198
Query: 312 YEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLL 371
+L +NALI Y + + DA VF+ I K+L
Sbjct: 199 SSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDL------------------------ 234
Query: 372 QLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM-QLAKVKPNCVTFSTVLS 430
ISWS++I+GF+ G E+L + M PN F + L
Sbjct: 235 ----------------ISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLK 278
Query: 431 VCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLIS 490
C+ L + G ++HG +++ + N + G L +MY +CG VFD IE D S
Sbjct: 279 ACSSLLRPDYGSQIHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTAS 338
Query: 491 WNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMV 550
WN +I+G +G D A++ F +M +G PD ++ + L A + ++ G + ++
Sbjct: 339 WNVIIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYII 398
Query: 551 R 551
+
Sbjct: 399 K 399
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 140/343 (40%), Gaps = 44/343 (12%)
Query: 258 RCGLYDETLELFKL-MRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYL 316
+ Y E LE F + +I +I C+ + + R+IH +++ +
Sbjct: 43 KSNFYREALEAFDFAQKNSSFKIRLRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDT 102
Query: 317 FVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKS 376
+ N ++ Y K L DA VF + +NL
Sbjct: 103 ILNNHILSMYGKCGSLRDAREVFDFMPERNL----------------------------- 133
Query: 377 LDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELA 436
+S+++VI+G++ G G E++ L+ +M + P+ F +++ CA +
Sbjct: 134 -----------VSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSS 182
Query: 437 ALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLIS 496
+ LG++LH ++ +++ N LI MY++ VF I +DLISW+S+I+
Sbjct: 183 DVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIA 242
Query: 497 GYGMHGLGDNALTTFDEMIKAGM-KPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRI 555
G+ G AL+ EM+ G+ P+ F ++L ACS G + ++ +
Sbjct: 243 GFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS-EL 301
Query: 556 EPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALL 598
L D+ R G L A + + P+ W ++
Sbjct: 302 AGNAIAGCSLCDMYARCGFLNSARRVFDQIE-RPDTASWNVII 343
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 322 bits (824), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 206/666 (30%), Positives = 324/666 (48%), Gaps = 91/666 (13%)
Query: 48 ITLLQQCSTLQQARQLHSQTILTAAYRKPFL------AAKLIALYARFGSVSHAQKVFNA 101
I LQ+C+ Q+ + Q I RK FL L+ +YA+ G + A VF
Sbjct: 64 IATLQRCA--QRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG 121
Query: 102 VPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSS 161
ER + +N++I V +G A+E Y MR G PD +T P +++ + S
Sbjct: 122 S--ER--DVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELS 177
Query: 162 SLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGY 221
+ + VH A +LGF + +V + LV Y K +EDA ++FD +P R
Sbjct: 178 DV-KKVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRD----------- 225
Query: 222 AFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISA 281
+SV W +L++ + + +++ L +F MR G +S
Sbjct: 226 -----------------------DSVLWNALVNGYSQIFRFEDALLVFSKMREEGVGVSR 262
Query: 282 EALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFD 341
+ V+S ++D R IHG +K G + V NALID Y
Sbjct: 263 HTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALIDMYG-------------- 308
Query: 342 IKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKG 401
K+K LE N++ + E L +W++V+ G
Sbjct: 309 -KSKWLEEANSIFEAMDERDL-------------------------FTWNSVLCVHDYCG 342
Query: 402 CGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAV----RNLMDDNI 457
+ +L LF RM + ++P+ VT +TVL C LA+L GRE+HGY + N N
Sbjct: 343 DHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNE 402
Query: 458 LVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKA 517
+ N L++MY+KCGD + +VFD++ +D SWN +I+GYG+ G+ AL F M +A
Sbjct: 403 FIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRA 462
Query: 518 GMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQE 577
G+KPD +TFV L ACSH+G + GRN QM + I PT +HYAC++D+LGRA L+E
Sbjct: 463 GVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEE 522
Query: 578 ANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAA 637
A ++ + PI N +W ++L+SCR H + + ++ L + G ++L+SN+Y
Sbjct: 523 AYELAISKPICDNPVVWRSILSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVE 582
Query: 638 NGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQ 697
G++E+ VR + +++ +KKTPG SWI ++ V+TF GN H ++ L +
Sbjct: 583 AGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWLSLVISH 642
Query: 698 MANENY 703
M Y
Sbjct: 643 MHGHEY 648
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 87/180 (48%), Gaps = 4/180 (2%)
Query: 421 NCVTFSTVLSVCAELAALNLGRELHGYAVRN-LMDDNILVGNGLINMYMKCGDFKKGHLV 479
N T L CA+ G+++HG+ VR +DD+ G L+NMY KCG ++ LV
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 480 FDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLV 539
F E RD+ +N+LISG+ ++G +A+ T+ EM G+ PD TF + L L
Sbjct: 119 FGGSE-RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELS 177
Query: 540 AAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLN 599
+ + + + + + LV + +++A + +P + +W AL+N
Sbjct: 178 DVKK--VHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVN 235
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 321 bits (823), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 213/726 (29%), Positives = 348/726 (47%), Gaps = 102/726 (14%)
Query: 53 QCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPL 112
Q L R +H Q I T A A L+ YA+ G ++ A +FNA+ + +
Sbjct: 26 QQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICK---DVVS 82
Query: 113 WNSIIRANVSHGYFEFA---IEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHC 169
WNS+I +G + ++++ MR P+ +TL I +A S L SS++ R H
Sbjct: 83 WNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHA 142
Query: 170 HALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVG 229
+++ ++V LVGMY K G +ED ++F MP R +W+TMVSGYA
Sbjct: 143 LVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEE 202
Query: 230 ASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVIS 289
A ++F LF + G + S V+S
Sbjct: 203 AIKVFN--------------------------------LFLREKEEGSD-SDYVFTAVLS 229
Query: 290 VCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLES 349
A + V R+IH IK G ++ + NAL+ Y K + L +A +F ++N +
Sbjct: 230 SLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSIT 289
Query: 350 WNALISSYAESGLCEEAHAVLLQ-------------------------LEKSLDGHQPL- 383
W+A+++ Y+++G EA + + LE+ H L
Sbjct: 290 WSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLL 349
Query: 384 ----RPNVISWSAVISGFASKGC-------------------------------GEESLE 408
++ + +A++ +A GC EE+L
Sbjct: 350 KLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALI 409
Query: 409 LFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYM 468
L+RRM+ A + PN T ++VL C+ LA L LG+++HG+ +++ + +G+ L MY
Sbjct: 410 LYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYS 469
Query: 469 KCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVT 528
KCG + G+LVF +D++SWN++ISG +G GD AL F+EM+ GM+PD VTFV
Sbjct: 470 KCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVN 529
Query: 529 ALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIE 588
+SACSH G V G F M + ++P V+HYAC+VDLL RAG L+EA + + + I+
Sbjct: 530 IISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANID 589
Query: 589 PNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVR 648
+W LL++C+ H ++ +++ L S+ + +++ LS IY A GR D RV
Sbjct: 590 HGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVW 649
Query: 649 ISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY--ELN 706
+ G+ K G SWIE++ + + F G+ +H ++E ++ ++ QM E + L+
Sbjct: 650 KHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKDLVCLVSRQMIEEGFVTVLD 709
Query: 707 SCFNQE 712
S F +E
Sbjct: 710 SSFVEE 715
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 131/260 (50%), Gaps = 7/260 (2%)
Query: 47 FITLLQQCST---LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
+ +L CS L++ +QLHS + R F L+ +YA+ G ++ A+K F+ +
Sbjct: 325 IVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQ 384
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
ER + LW S+I V + E A+ +Y M+ G P+ T+ +++ACS L + L
Sbjct: 385 -ER--DVALWTSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLEL 441
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
+ VH H ++ GF + + + L MY K G +ED +F P + ++SWN M+SG +
Sbjct: 442 GKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSH 501
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTR-GCEISAE 282
N A +F+ M E P+ VT+ +++S+ G + F +M + G + +
Sbjct: 502 NGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVD 561
Query: 283 ALAVVISVCADVVEVDRSRE 302
A ++ + + ++ ++E
Sbjct: 562 HYACMVDLLSRAGQLKEAKE 581
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 5/190 (2%)
Query: 417 KVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKG 476
++ P+ T L+ ++ L GR +HG +R I N L+N Y KCG K
Sbjct: 9 ELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKA 68
Query: 477 HLVFDNIEGRDLISWNSLISGYGMHGLGDNALTT---FDEMIKAGMKPDHVTFVTALSAC 533
H +F+ I +D++SWNSLI+GY +G ++ T F EM + P+ T A
Sbjct: 69 HSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAE 128
Query: 534 SHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYI 593
S GR + +V + + LV + +AGL+++ + MP E N Y
Sbjct: 129 SSLQSSTVGRQA-HALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMP-ERNTYT 186
Query: 594 WGALLNSCRT 603
W +++ T
Sbjct: 187 WSTMVSGYAT 196
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 321 bits (822), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 222/793 (27%), Positives = 374/793 (47%), Gaps = 141/793 (17%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRK-PFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
++ L + CS+L+ QLH+ ++T R+ P KLI YA GS ++ VF A P+
Sbjct: 4 YMPLFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYP 63
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACS----HLGSS 161
D ++ +I+ NV + AI++Y + F P ++ AC+ HL
Sbjct: 64 --DSF-MYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHL--- 117
Query: 162 SLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGY 221
S+ VH ++ G + + L+ MYG+ G + DA ++FDGMPVR +++W+T+VS
Sbjct: 118 SVGGKVHGRIIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSC 177
Query: 222 AFNHDCVGASRIFKRMELEDWRPNSVTW-------------------------------- 249
N + V A R+FK M + P++VT
Sbjct: 178 LENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDE 237
Query: 250 ---TSLLSSHKRCG-------------------------------LYDETLELFKLMRTR 275
SLL+ + +CG ++ L F M
Sbjct: 238 TLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKS 297
Query: 276 GCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYE-DYLFVKNALIDTYRKHKHLGD 334
G E + L V+S C + + + +HG+ ++ + +Y + AL++ Y + L D
Sbjct: 298 GIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSLALVELYAECGKLSD 357
Query: 335 AHNVFFDIKNKNLESWNALISSYAESGLCEEA---------------------------H 367
V + ++N+ +WN+LIS YA G+ +A +
Sbjct: 358 CETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACEN 417
Query: 368 AVLLQLEKSLDGH---------------------------------QPLRPNVISWSAVI 394
A L+ L K + GH Q +V++W++++
Sbjct: 418 AGLVPLGKQIHGHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSML 477
Query: 395 SGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMD 454
GF+ G E++ LF M + ++ N VTF V+ C+ + +L G+ +H + + +
Sbjct: 478 CGFSQNGNSVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLK 537
Query: 455 DNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEM 514
D + LI+MY KCGD VF + R ++SW+S+I+ YGMHG +A++TF++M
Sbjct: 538 D-LFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQM 596
Query: 515 IKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGL 574
+++G KP+ V F+ LSAC H+G V G+ ++ +++ F + P EH+AC +DLL R+G
Sbjct: 597 VESGTKPNEVVFMNVLSACGHSGSVEEGK-YYFNLMKSFGVSPNSEHFACFIDLLSRSGD 655
Query: 575 LQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNI 634
L+EA ++ MP + +WG+L+N CR H+ I++ + + + + TG + LLSNI
Sbjct: 656 LKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLSNI 715
Query: 635 YAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEEL 694
YA G WE+ R+R + K LKK PG S IE+ +KV+ F AG + DE+Y L L
Sbjct: 716 YAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIYRFLGNL 775
Query: 695 ALQMANENYELNS 707
+ NE + ++S
Sbjct: 776 Q-NLTNEEHVVDS 787
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 320 bits (821), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 188/565 (33%), Positives = 301/565 (53%), Gaps = 60/565 (10%)
Query: 184 NKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWR 243
N LV Y K G +++A ++FD MP R ++SW +V GY N A +F +M
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKMP----E 138
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREI 303
N V+WT +L + G D+ +L++++ + + +++ +C + VD +REI
Sbjct: 139 KNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKD---NIARTSMIHGLCKEG-RVDEAREI 194
Query: 304 HGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLC 363
+ E + ++ Y ++ + DA +F + K SW +++ Y ++G
Sbjct: 195 FDEM----SERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQNGRI 250
Query: 364 EEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKG---------------------- 401
E+A + + P++P VI+ +A+ISG KG
Sbjct: 251 EDAEELFEVM--------PVKP-VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQT 301
Query: 402 ---------CGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNL 452
E+L+LF MQ V+P T ++LSVCA LA+L+ G+++H VR
Sbjct: 302 VIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361
Query: 453 MDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFD 512
D ++ V + L+ MY+KCG+ K L+FD +D+I WNS+ISGY HGLG+ AL F
Sbjct: 362 FDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFC 421
Query: 513 EMIKAG-MKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGR 571
EM +G KP+ VTFV LSACS+AG+V G ++ M F ++P HYAC+VD+LGR
Sbjct: 422 EMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGR 481
Query: 572 AGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLL 631
AG EA +++ +M +EP+ +WG+LL +CRTH + E A +++ + + +G+++LL
Sbjct: 482 AGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILL 541
Query: 632 SNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNI-VHLGLDEVYVI 690
SN+YA+ GRW D A +R K + ++K+PG SW EV KV+ F+ G I H + + I
Sbjct: 542 SNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKI 601
Query: 691 LEELALQMANENYELNSCFNQECIY 715
L+EL + Y N +C Y
Sbjct: 602 LDELDGLLREAGY------NPDCSY 620
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 117/220 (53%), Gaps = 5/220 (2%)
Query: 57 LQQARQLHSQTILTAAYRKPFLAAK-LIALYARFGSVSHAQKVFNAVPFERLDHIPLWNS 115
+Q R ++ + KP +A +I+ + G ++ A++VF+++ ER D W +
Sbjct: 245 VQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMK-ERND--ASWQT 301
Query: 116 IIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELG 175
+I+ + +G+ A+++++ M+K G P TL I+ C+ L S + VH +
Sbjct: 302 VIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361
Query: 176 FRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFK 235
F ++V + L+ MY K G + + +FD P + I+ WN+++SGYA + A ++F
Sbjct: 362 FDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFC 421
Query: 236 RMELE-DWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRT 274
M L +PN VT+ + LS+ G+ +E L++++ M +
Sbjct: 422 EMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMES 461
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 94/199 (47%), Gaps = 25/199 (12%)
Query: 452 LMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTF 511
+ D NI+ NGL++ YMK G+ + VFD + R+++SW +L+ GY +G D A + F
Sbjct: 74 MPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLF 133
Query: 512 DEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYA--CLVDLL 569
+M + + V++ L G + L Y+M+ P ++ A ++ L
Sbjct: 134 WKMPEK----NKVSWTVMLIGFLQDGRIDDACKL-YEMI------PDKDNIARTSMIHGL 182
Query: 570 GRAGLLQEANDIVRNMPIEPNEYIWGALL----NSCRTHKDTKIVEETASQILTLNSQIT 625
+ G + EA +I M E + W ++ + R KI + ++ ++++
Sbjct: 183 CKEGRVDEAREIFDEMS-ERSVITWTTMVTGYGQNNRVDDARKIFD-----VMPEKTEVS 236
Query: 626 GSFMLLSNIYAANGRWEDS 644
+ ML+ Y NGR ED+
Sbjct: 237 WTSMLMG--YVQNGRIEDA 253
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 26/233 (11%)
Query: 424 TFSTVLSV-CAELAALNLGRELHGYAVRNLMDD----NILVGNGLINMYMKCGDFKKGHL 478
T+ST + A + +L R + R L D +I N ++ Y +
Sbjct: 10 TYSTTIPPPTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLMPRDARK 69
Query: 479 VFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGL 538
+FD + R++ISWN L+SGY +G D A FD M + + V++ + H G
Sbjct: 70 LFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNV----VSWTALVKGYVHNGK 125
Query: 539 VAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPN---EYIWG 595
V +LF++M + ++ TV L D G + +A + +P + N +
Sbjct: 126 VDVAESLFWKMPEKNKVSWTVMLIGFLQD-----GRIDDACKLYEMIPDKDNIARTSMIH 180
Query: 596 ALLNSCRTHKDTKIVEETASQ-ILTLNSQITGSFMLLSNIYAANGRWEDSARV 647
L R + +I +E + + ++T + +TG Y N R +D+ ++
Sbjct: 181 GLCKEGRVDEAREIFDEMSERSVITWTTMVTG--------YGQNNRVDDARKI 225
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 319 bits (818), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 182/625 (29%), Positives = 324/625 (51%), Gaps = 41/625 (6%)
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRI 166
L + WN IR V+ ++ ++ M++ GF P+ FT P + +AC+ L C +
Sbjct: 14 LSSVNAWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEM 73
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHD 226
VH H ++ F + + V V M+ K ++ A ++F+ MP R +WN M+SG+ +
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
A +F+ M L + P+SVT +L+ S ++++L+L + M G + +
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSAS----FEKSLKLLEAMHAVGIRLGVDVQVT 189
Query: 287 V----ISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDI 342
V IS ++D ++ + + +G + + N++ Y DA ++ +
Sbjct: 190 VANTWISTYGKCGDLDSAKLVFEAIDRG--DRTVVSWNSMFKAYSVFGEAFDAFGLYCLM 247
Query: 343 KNKNLESWNALISSYAES---------GLCEEAHAVLLQLEKSLDGHQPL---------- 383
+ + + + A S G +HA+ L ++ ++
Sbjct: 248 LREEFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDT 307
Query: 384 -----------RPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVC 432
+SW+ +ISG+A KG +E+L LF M + KP+ VT +++S C
Sbjct: 308 CSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISGC 367
Query: 433 AELAALNLGRELHGYA-VRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISW 491
+ +L G+ + A + DN+++ N LI+MY KCG + +FDN + +++W
Sbjct: 368 GKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTW 427
Query: 492 NSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVR 551
++I+GY ++G+ AL F +MI KP+H+TF+ L AC+H+G + G F+ M +
Sbjct: 428 TTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQ 487
Query: 552 EFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVE 611
+ I P ++HY+C+VDLLGR G L+EA +++RNM +P+ IWGALLN+C+ H++ KI E
Sbjct: 488 VYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAE 547
Query: 612 ETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKV 671
+ A + L Q+ ++ ++NIYAA G W+ AR+R K++ +KK PG+S I+V K
Sbjct: 548 QAAESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKN 607
Query: 672 YTFSAGNIVHLGLDEVYVILEELAL 696
++F+ G H+ + +Y L L+L
Sbjct: 608 HSFTVGEHGHVENEVIYFTLNGLSL 632
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 182/413 (44%), Gaps = 56/413 (13%)
Query: 48 ITLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPF 104
+TL+Q S +L+ +H+ I + +A I+ Y + G + A+ VF A+
Sbjct: 157 MTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAI-- 214
Query: 105 ERLDHIPL-WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
+R D + WNS+ +A G A +Y M + F PD T + +C + + +
Sbjct: 215 DRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFKPDLSTFINLAASCQNPETLTQ 274
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQ---LFDGMPVRTILSWNTMVSG 220
R++H HA+ LG + +N + MY K ED C LFD M RT +SW M+SG
Sbjct: 275 GRLIHSHAIHLGTDQDIEAINTFISMYSK---SEDTCSARLLFDIMTSRTCVSWTVMISG 331
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEIS 280
YA D A +F M +P+ VT SL+S CG + +LE K + R
Sbjct: 332 YAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISG---CGKFG-SLETGKWIDAR----- 382
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFF 340
AD I G D + + NALID Y K + +A ++F
Sbjct: 383 -----------AD--------------IYGCKRDNVMICNALIDMYSKCGSIHEARDIFD 417
Query: 341 DIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASK 400
+ K + +W +I+ YA +G+ EA L K +D +PN I++ AV+ A
Sbjct: 418 NTPEKTVVTWTTMIAGYALNGIFLEA---LKLFSKMID--LDYKPNHITFLAVLQACAHS 472
Query: 401 GCGEESLELFRRM-QLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNL 452
G E+ E F M Q+ + P +S ++ + L EL +RN+
Sbjct: 473 GSLEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALEL----IRNM 521
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 107/423 (25%), Positives = 184/423 (43%), Gaps = 58/423 (13%)
Query: 63 LHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVS 122
+H+ I + + F+ + ++ + SV +A KVF +P ER WN+++
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMP-ER--DATTWNAMLSGFCQ 130
Query: 123 HGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHV 182
G+ + A ++ MR PD T+ +I++ S S L +H + LG + V
Sbjct: 131 SGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTV 190
Query: 183 VNKLVGMYGKLGRMEDACQLFDGMPV--RTILSWNTMVSGYAFNHDCVGASRIFKRMELE 240
N + YGK G ++ A +F+ + RT++SWN+M Y+ + A ++ M E
Sbjct: 191 ANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE 250
Query: 241 DWRPN---------------SVTWTSLLSSHKRCGLYDETLE------------------ 267
+++P+ ++T L+ SH D+ +E
Sbjct: 251 EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSA 310
Query: 268 --LFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDT 325
LF +M +R C + V+IS A+ ++D + + +IK G + L +LI
Sbjct: 311 RLLFDIMTSRTC----VSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISG 366
Query: 326 YRKHKHLG-----DAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGH 380
K L DA + K N+ NALI Y++ G EA + +
Sbjct: 367 CGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIF--------DN 418
Query: 381 QPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNL 440
P + V++W+ +I+G+A G E+L+LF +M KPN +TF VL CA +L
Sbjct: 419 TPEK-TVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEK 477
Query: 441 GRE 443
G E
Sbjct: 478 GWE 480
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 318 bits (815), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 169/514 (32%), Positives = 295/514 (57%), Gaps = 23/514 (4%)
Query: 177 RNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKR 236
++ + +NK++ + G ++ A ++F GM + ++WN+++ G + + SR+ +
Sbjct: 58 QDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKD-----PSRMMEA 112
Query: 237 MELEDW--RPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADV 294
+L D P++ ++ +LS + R +++ F M + A + +I+ A
Sbjct: 113 HQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGYARR 168
Query: 295 VEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALI 354
E++++RE+ +++ + NA+I Y + L A + F + + +W A+I
Sbjct: 169 GEMEKARELFYSMMEKNEVSW----NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMI 224
Query: 355 SSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQ 414
+ Y ++ E A A+ + + N+++W+A+ISG+ E+ L+LFR M
Sbjct: 225 TGYMKAKKVELAEAMFKDM--------TVNKNLVTWNAMISGYVENSRPEDGLKLFRAML 276
Query: 415 LAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFK 474
++PN S+ L C+EL+AL LGR++H ++ + +++ LI+MY KCG+
Sbjct: 277 EEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELG 336
Query: 475 KGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACS 534
+F+ ++ +D+++WN++ISGY HG D AL F EMI ++PD +TFV L AC+
Sbjct: 337 DAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACN 396
Query: 535 HAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIW 594
HAGLV G F MVR++++EP +HY C+VDLLGRAG L+EA ++R+MP P+ ++
Sbjct: 397 HAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRAGKLEEALKLIRSMPFRPHAAVF 456
Query: 595 GALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKK 654
G LL +CR HK+ ++ E A ++L LNSQ ++ L+NIYA+ RWED ARVR K+
Sbjct: 457 GTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQLANIYASKNRWEDVARVRKRMKES 516
Query: 655 GLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVY 688
+ K PG SWIE+R KV+ F + + +H LD ++
Sbjct: 517 NVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIH 550
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 103/220 (46%), Gaps = 6/220 (2%)
Query: 53 QCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPL 112
+C L++A S A R +I Y + V A+ +F + + ++
Sbjct: 198 ECGDLEKA----SHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNK--NLVT 251
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL 172
WN++I V + E ++++ M + G P+ L + CS L + L R +H
Sbjct: 252 WNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVS 311
Query: 173 ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASR 232
+ N + + L+ MY K G + DA +LF+ M + +++WN M+SGYA + + A
Sbjct: 312 KSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALC 371
Query: 233 IFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLM 272
+F+ M RP+ +T+ ++L + GL + + F+ M
Sbjct: 372 LFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESM 411
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 315 bits (808), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 208/766 (27%), Positives = 365/766 (47%), Gaps = 119/766 (15%)
Query: 45 DFFITLLQQC---STLQQARQLHSQTILTAAY--RKPFLAAKLIALYARFGSVSHAQKVF 99
+ + +LQ C L +Q+H++ + + R ++ KL+ YA+ ++ A+ +F
Sbjct: 71 EIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLF 130
Query: 100 NAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLG 159
+ + R+ ++ W +II G E A+ +V M + FPD F +P + +AC L
Sbjct: 131 SKL---RVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALK 187
Query: 160 SSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLG------------------------- 194
S R VH + ++ G + + V + L MYGK G
Sbjct: 188 WSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMV 247
Query: 195 ------RMEDACQLFDGM------PVRTILS----------------------------W 214
+ E+A +LF M P R +S
Sbjct: 248 GYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMEL 307
Query: 215 NTMVSGYAFNHDC-VG----ASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELF 269
+ ++ N C VG A +F RM + + VTW ++S + + GL ++ + +
Sbjct: 308 DNILGTSLLNFYCKVGLIEYAEMVFDRM----FEKDVVTWNLIISGYVQQGLVEDAIYMC 363
Query: 270 KLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKH 329
+LMR + LA ++S A + +E+ Y I+ +E + + + ++D Y K
Sbjct: 364 QLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKC 423
Query: 330 KHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQP------- 382
+ DA VF K+L WN L+++YAESGL EA + ++ L+G P
Sbjct: 424 GSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQ--LEGVPPNVITWNL 481
Query: 383 -----LR--------------------PNVISWSAVISGFASKGCGEESLELFRRMQLAK 417
LR PN+ISW+ +++G GC EE++ R+MQ +
Sbjct: 482 IILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESG 541
Query: 418 VKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNIL-VGNGLINMYMKCGDFKKG 476
++PN + + LS CA LA+L++GR +HGY +RNL +++ + L++MY KCGD K
Sbjct: 542 LRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKA 601
Query: 477 HLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHA 536
VF + +L N++IS Y ++G A+ + + G+KPD++T LSAC+HA
Sbjct: 602 EKVFGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHA 661
Query: 537 GLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGA 596
G + +F +V + ++P +EHY +VDLL AG ++A ++ MP +P+ + +
Sbjct: 662 GDINQAIEIFTDIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQS 721
Query: 597 LLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGL 656
L+ SC + T++V+ + ++L + +G+++ +SN YA G W++ ++R K KGL
Sbjct: 722 LVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGL 781
Query: 657 KKTPGQSWIEV--RKKVYTFSAGNIVHLGLDEVYVILEELALQMAN 700
KK PG SWI++ + V+ F A + H ++E+ ++L L M
Sbjct: 782 KKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALLLYDMGT 827
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 144/333 (43%), Gaps = 41/333 (12%)
Query: 212 LSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKL 271
L +NT+ + F+ V + K + + P+S ++ +SS + G E L L
Sbjct: 4 LPFNTIPNKVPFS---VSSKPSSKHHDEQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTE 60
Query: 272 MRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKH 331
M R I E ++ C ++ ++IH ++K G D+ + +N I+T
Sbjct: 61 MDFRNLRIGPEIYGEILQGCVYERDLSTGKQIHARILKNG--DF-YARNEYIET------ 111
Query: 332 LGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWS 391
L+ YA+ E A + +L NV SW+
Sbjct: 112 --------------------KLVIFYAKCDALEIAEVLFSKLRVR---------NVFSWA 142
Query: 392 AVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRN 451
A+I G E +L F M ++ P+ V C L GR +HGY V++
Sbjct: 143 AIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKS 202
Query: 452 LMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTF 511
++D + V + L +MY KCG VFD I R+ ++WN+L+ GY +G + A+ F
Sbjct: 203 GLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLF 262
Query: 512 DEMIKAGMKPDHVTFVTALSACSHAGLVAAGRN 544
+M K G++P VT T LSA ++ G V G+
Sbjct: 263 SDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQ 295
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 96/221 (43%), Gaps = 4/221 (1%)
Query: 380 HQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALN 439
Q P+ S+ +S G +E+L L M ++ + +L C L+
Sbjct: 28 EQAHSPSSTSYFHRVSSLCKNGEIKEALSLVTEMDFRNLRIGPEIYGEILQGCVYERDLS 87
Query: 440 LGRELHGYAVRN--LMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISG 497
G+++H ++N N + L+ Y KC + ++F + R++ SW ++I
Sbjct: 88 TGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLFSKLRVRNVFSWAAIIGV 147
Query: 498 YGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEP 557
GL + AL F EM++ + PD+ AC GR + +V+ +E
Sbjct: 148 KCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKS-GLED 206
Query: 558 TVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALL 598
V + L D+ G+ G+L +A+ + +P + N W AL+
Sbjct: 207 CVFVASSLADMYGKCGVLDDASKVFDEIP-DRNAVAWNALM 246
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 315 bits (806), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 194/667 (29%), Positives = 330/667 (49%), Gaps = 84/667 (12%)
Query: 47 FITLLQQC--STLQQA-RQLHSQTILTAAYRKPFLAAK--LIALYARFGSVSHAQKVFNA 101
F TLL C + Q A Q+H+ + PFL L+ Y + A +F
Sbjct: 150 FTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEE 209
Query: 102 VPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSS 161
+P D + +N++I G + +I +++ MR+ G P FT +++A L
Sbjct: 210 IP--EKDSVT-FNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDF 266
Query: 162 SLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGY 221
+L + +H ++ GF V N+++ Y K R+ + LFD MP +S+N ++S
Sbjct: 267 ALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS-- 324
Query: 222 AFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISA 281
S+ + Y+ +L F+ M+ G +
Sbjct: 325 ---------------------------------SYSQADQYEASLHFFREMQCMGFDRRN 351
Query: 282 EALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFD 341
A ++S+ A++ + R++H + + L V N+L+D Y
Sbjct: 352 FPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMY--------------- 396
Query: 342 IKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKG 401
A+ + EEA + KSL P R V SW+A+ISG+ KG
Sbjct: 397 ----------------AKCEMFEEAELIF----KSL----PQRTTV-SWTALISGYVQKG 431
Query: 402 CGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGN 461
L+LF +M+ + ++ + TF+TVL A A+L LG++LH + +R+ +N+ G+
Sbjct: 432 LHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGS 491
Query: 462 GLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKP 521
GL++MY KCG K VF+ + R+ +SWN+LIS + +G G+ A+ F +MI++G++P
Sbjct: 492 GLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQP 551
Query: 522 DHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI 581
D V+ + L+ACSH G V G F M + I P +HYAC++DLLGR G EA +
Sbjct: 552 DSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKL 611
Query: 582 VRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNS-QITGSFMLLSNIYAANGR 640
+ MP EP+E +W ++LN+CR HK+ + E A ++ ++ + +++ +SNIYAA G
Sbjct: 612 MDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGE 671
Query: 641 WEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMAN 700
WE V+ + +++G+KK P SW+EV K++ FS+ + H DE+ + EL ++
Sbjct: 672 WEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEIER 731
Query: 701 ENYELNS 707
E Y+ ++
Sbjct: 732 EGYKPDT 738
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 132/505 (26%), Positives = 232/505 (45%), Gaps = 79/505 (15%)
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
R V ++ GF N +V + G++ A +++D MP + +S NTM+SG+
Sbjct: 33 RRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKT 92
Query: 225 HDCVGASRIFKRMELEDWRPNS--VTWTSLLSSHKRCGLYDETLELFKLM-RTRGCEISA 281
D A +F M P+ VTWT L+ + R +DE +LF+ M R+ C +
Sbjct: 93 GDVSSARDLFDAM------PDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPD 146
Query: 282 E-ALAVVISVCADVVEVDRSREIHGYVIKGGYE--DYLFVKNALIDTYRKHKHLGDAHNV 338
++ C D V + ++H + +K G++ +L V N L+ +Y + + L A +
Sbjct: 147 HVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVL 206
Query: 339 FFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQP--------LRPNV--- 387
F +I K+ ++N LI+ Y + GL E+ + L++ +S GHQP L+ V
Sbjct: 207 FEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQS--GHQPSDFTFSGVLKAVVGLH 264
Query: 388 -------ISWSAVISGFASKG-CGEESLELFR--------RMQLAKVKP-NCVTFSTVLS 430
+ +V +GF+ G + L+ + RM ++ + V+++ V+S
Sbjct: 265 DFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVIS 324
Query: 431 VCAEL----AALNLGRELH--GYAVRNL----------------------------MDDN 456
++ A+L+ RE+ G+ RN D+
Sbjct: 325 SYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADS 384
Query: 457 IL-VGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMI 515
IL VGN L++MY KC F++ L+F ++ R +SW +LISGY GL L F +M
Sbjct: 385 ILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMR 444
Query: 516 KAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLL 575
+ ++ D TF T L A + + G+ L ++R +E V + LVD+ + G +
Sbjct: 445 GSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLE-NVFSGSGLVDMYAKCGSI 503
Query: 576 QEANDIVRNMPIEPNEYIWGALLNS 600
++A + MP + N W AL+++
Sbjct: 504 KDAVQVFEEMP-DRNAVSWNALISA 527
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 121/250 (48%), Gaps = 13/250 (5%)
Query: 300 SREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAE 359
+R + +IK G++ N +++ + + A V+ ++ +KN S N +IS + +
Sbjct: 32 TRRVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVK 91
Query: 360 SGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAK-- 417
+G A + L P R V++W+ ++ +A +E+ +LFR+M +
Sbjct: 92 TGDVSSA--------RDLFDAMPDR-TVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSC 142
Query: 418 VKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDN--ILVGNGLINMYMKCGDFKK 475
P+ VTF+T+L C + N ++H +AV+ D N + V N L+ Y +
Sbjct: 143 TLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDL 202
Query: 476 GHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSH 535
++F+ I +D +++N+LI+GY GL ++ F +M ++G +P TF L A
Sbjct: 203 ACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVG 262
Query: 536 AGLVAAGRNL 545
A G+ L
Sbjct: 263 LHDFALGQQL 272
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 315 bits (806), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 191/610 (31%), Positives = 307/610 (50%), Gaps = 82/610 (13%)
Query: 63 LHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVS 122
+H + + + R ++ L+A+Y FG V A+ VF+ + + D I WN++I
Sbjct: 139 VHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVM--KNRDVIS-WNTMISGYYR 195
Query: 123 HGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHV 182
+GY A+ ++ M D T+ ++ C HL + R VH E + + V
Sbjct: 196 NGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEV 255
Query: 183 VNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDW 242
N LV MY K GRM++A +FD RME
Sbjct: 256 KNALVNMYLKCGRMDEARFVFD-------------------------------RME---- 280
Query: 243 RPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSRE 302
R + +TWT +++ + G + LEL +LM+ G +A +A ++SVC D ++V+ +
Sbjct: 281 RRDVITWTCMINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKC 340
Query: 303 IHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGL 362
+HG+ ++ + ++ +LI Y K K + VF +S +G
Sbjct: 341 LHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSG-------------ASKYHTG- 386
Query: 363 CEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNC 422
WSA+I+G ++L LF+RM+ V+PN
Sbjct: 387 --------------------------PWSAIIAGCVQNELVSDALGLFKRMRREDVEPNI 420
Query: 423 VTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDN 482
T +++L A LA L +H Y + ++ GL+++Y KCG + H +F+
Sbjct: 421 ATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNG 480
Query: 483 IE----GRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGL 538
I+ +D++ W +LISGYGMHG G NAL F EM+++G+ P+ +TF +AL+ACSH+GL
Sbjct: 481 IQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGL 540
Query: 539 VAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALL 598
V G LF M+ ++ HY C+VDLLGRAG L EA +++ +P EP +WGALL
Sbjct: 541 VEEGLTLFRFMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALL 600
Query: 599 NSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKK 658
+C TH++ ++ E A+++ L + TG+++LL+NIYAA GRW+D +VR + GL+K
Sbjct: 601 AACVTHENVQLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRK 660
Query: 659 TPGQSWIEVR 668
PG S IE+R
Sbjct: 661 KPGHSTIEIR 670
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 135/558 (24%), Positives = 240/558 (43%), Gaps = 89/558 (15%)
Query: 56 TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNS 115
++ + + LH ++T + + L YA G +++A+K+F +P L +N
Sbjct: 30 SISKTKALHCH-VITGGRVSGHILSTLSVTYALCGHITYARKLFEEMPQSSLLS---YNI 85
Query: 116 IIRANVSHGYFEFAIEIYVGMRKFGF--FPDGFTLPLIIEACSHLGSSSLCRIVHCHALE 173
+IR V G + AI +++ M G PDG+T P + +A L S L +VH L
Sbjct: 86 VIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILR 145
Query: 174 LGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRI 233
F +V N L+ MY G++E A +FD M R ++SWNTM+SGY N
Sbjct: 146 SWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRN--------- 196
Query: 234 FKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCAD 293
G ++ L +F M ++ + ++ VC
Sbjct: 197 --------------------------GYMNDALMMFDWMVNESVDLDHATIVSMLPVCGH 230
Query: 294 VVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNAL 353
+ +++ R +H V + D + VKNAL++ Y K + +A VF ++ +++ +W +
Sbjct: 231 LKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCM 290
Query: 354 ISSYAESGLCEEAHAV--LLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFR 411
I+ Y E G E A + L+Q E +RPN
Sbjct: 291 INGYTEDGDVENALELCRLMQFE-------GVRPNA------------------------ 319
Query: 412 RMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCG 471
VT ++++SVC + +N G+ LHG+AVR + +I++ LI+MY KC
Sbjct: 320 -----------VTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCK 368
Query: 472 DFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALS 531
VF W+++I+G + L +AL F M + ++P+ T + L
Sbjct: 369 RVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLP 428
Query: 532 ACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI---VRNMPIE 588
A + + N+ + + + +++ LV + + G L+ A+ I ++
Sbjct: 429 AYAALADLRQAMNIHCYLTKTGFM-SSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKS 487
Query: 589 PNEYIWGALLNSCRTHKD 606
+ +WGAL++ H D
Sbjct: 488 KDVVLWGALISGYGMHGD 505
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 155/415 (37%), Positives = 255/415 (61%), Gaps = 7/415 (1%)
Query: 287 VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKN 346
V+ + V +V R+IHG V+ G++ + V LI Y LGDA +F ++ K+
Sbjct: 122 VLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKD 181
Query: 347 LESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEES 406
+ WNAL++ Y + G +EA ++L + + N +SW+ VISG+A G E+
Sbjct: 182 VNVWNALLAGYGKVGEMDEARSLLEMMPCWVR-------NEVSWTCVISGYAKSGRASEA 234
Query: 407 LELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINM 466
+E+F+RM + V+P+ VT VLS CA+L +L LG + Y M+ + + N +I+M
Sbjct: 235 IEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDM 294
Query: 467 YMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTF 526
Y K G+ K VF+ + R++++W ++I+G HG G AL F+ M+KAG++P+ VTF
Sbjct: 295 YAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTF 354
Query: 527 VTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMP 586
+ LSACSH G V G+ LF M ++ I P +EHY C++DLLGRAG L+EA++++++MP
Sbjct: 355 IAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMP 414
Query: 587 IEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSAR 646
+ N IWG+LL + H D ++ E S+++ L +G++MLL+N+Y+ GRW++S
Sbjct: 415 FKANAAIWGSLLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRM 474
Query: 647 VRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANE 701
+R K G+KK G+S IEV +VY F +G++ H ++ ++ IL+E+ LQ+ ++
Sbjct: 475 MRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHEILQEMDLQIQSK 529
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 185/405 (45%), Gaps = 15/405 (3%)
Query: 45 DFFITLLQ-QCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
++F+T L+ + L+ +Q H I+T R AK I + G + +A VF P
Sbjct: 15 NWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQP 74
Query: 104 FERLDHIPLWNSIIRANV---SHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGS 160
+ L N++IRA AI +Y + PD FT P +++ +
Sbjct: 75 ---CPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSD 131
Query: 161 SSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSG 220
R +H + GF + +HVV L+ MY G + DA ++FD M V+ + WN +++G
Sbjct: 132 VWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAG 191
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEIS 280
Y + A + + M W N V+WT ++S + + G E +E+F+ M E
Sbjct: 192 YGKVGEMDEARSLLEMMPC--WVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPD 249
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFF 340
L V+S CAD+ ++ I YV G + + NA+ID Y K ++ A +VF
Sbjct: 250 EVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFE 309
Query: 341 DIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASK 400
+ +N+ +W +I+ A G EA A+ ++ K+ +RPN +++ A++S +
Sbjct: 310 CVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKA-----GVRPNDVTFIAILSACSHV 364
Query: 401 GCGEESLELFRRMQLA-KVKPNCVTFSTVLSVCAELAALNLGREL 444
G + LF M+ + PN + ++ + L E+
Sbjct: 365 GWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEV 409
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 109/270 (40%), Gaps = 39/270 (14%)
Query: 371 LQLEKSLDGHQPLRPNVISWSAVISGFA---SKGCGEESLELFRRMQLAKVKPNCVTFST 427
L+ S+ HQP PN + +I + ++ ++R++ KP+ TF
Sbjct: 63 LRYAYSVFTHQPC-PNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPF 121
Query: 428 VLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNI---- 483
VL + ++ + GR++HG V D ++ V GLI MY CG +FD +
Sbjct: 122 VLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKD 181
Query: 484 ------------------EGRDL-----------ISWNSLISGYGMHGLGDNALTTFDEM 514
E R L +SW +ISGY G A+ F M
Sbjct: 182 VNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRM 241
Query: 515 IKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGL 574
+ ++PD VT + LSAC+ G + G + V + V ++D+ ++G
Sbjct: 242 LMENVEPDEVTLLAVLSACADLGSLELGERIC-SYVDHRGMNRAVSLNNAVIDMYAKSGN 300
Query: 575 LQEANDIVRNMPIEPNEYIWGALLNSCRTH 604
+ +A D+ + E N W ++ TH
Sbjct: 301 ITKALDVFECVN-ERNVVTWTTIIAGLATH 329
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 311 bits (796), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 200/668 (29%), Positives = 326/668 (48%), Gaps = 94/668 (14%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKP--FLAAKLIALYARFGSVSHAQKVFNAVPF 104
F+ L +C L AR T +P F ++ YA+ + A+++F+ +P
Sbjct: 49 FVNLYSKCGRLSYARAAFYST------EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIP- 101
Query: 105 ERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLC 164
+ D + +N++I A+ ++ MRK GF DGFTL +I AC L
Sbjct: 102 -QPDTVS-YNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCD--RVDLI 157
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGM-PVRTILSWNTMVSGYAF 223
+ +HC ++ GF ++ V N V Y K G + +A +F GM +R +SWN+M+ Y
Sbjct: 158 KQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYG- 216
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
HK + L L+K M +G +I
Sbjct: 217 -------------------------------QHKEGA---KALALYKEMIFKGFKIDMFT 242
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKH---KHLGDAHNVFF 340
LA V++ + + R+ HG +IK G+ V + LID Y K + D+ VF
Sbjct: 243 LASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQ 302
Query: 341 DIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFA-S 399
+I L P+++ W+ +ISG++ +
Sbjct: 303 EI----------------------------------------LSPDLVVWNTMISGYSMN 322
Query: 400 KGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDN-IL 458
+ EE+++ FR+MQ +P+ +F V S C+ L++ + +++HG A+++ + N I
Sbjct: 323 EELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRIS 382
Query: 459 VGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAG 518
V N LI++Y K G+ + VFD + + +S+N +I GY HG G AL + M+ +G
Sbjct: 383 VNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSG 442
Query: 519 MKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEA 578
+ P+ +TFV LSAC+H G V G+ F M F+IEP EHY+C++DLLGRAG L+EA
Sbjct: 443 IAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEA 502
Query: 579 NDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAAN 638
+ MP +P W ALL +CR HK+ + E A++++ + +++L+N+YA
Sbjct: 503 ERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADA 562
Query: 639 GRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQM 698
+WE+ A VR S + K ++K PG SWIEV+KK + F A + H + EV LEE+ +M
Sbjct: 563 RKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEMMKKM 622
Query: 699 ANENYELN 706
Y ++
Sbjct: 623 KKVGYVMD 630
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 120/252 (47%), Gaps = 12/252 (4%)
Query: 301 REIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAES 360
+ +H +K ++ N ++ Y K L A F+ + N+ S+N ++ +YA+
Sbjct: 28 KSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKD 87
Query: 361 GLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKP 420
A + ++ + P+ +S++ +ISG+A ++ LF+RM+ +
Sbjct: 88 SKIHIARQLFDEIPQ---------PDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEV 138
Query: 421 NCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVF 480
+ T S +++ C + ++L ++LH ++V D V N + Y K G ++ VF
Sbjct: 139 DGFTLSGLIAACCD--RVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVF 196
Query: 481 DNI-EGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLV 539
+ E RD +SWNS+I YG H G AL + EMI G K D T + L+A + +
Sbjct: 197 YGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHL 256
Query: 540 AAGRNLFYQMVR 551
GR ++++
Sbjct: 257 IGGRQFHGKLIK 268
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 83/218 (38%), Gaps = 42/218 (19%)
Query: 424 TFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDF---------- 473
TF +L L G+ LH V++++ + + N +N+Y KCG
Sbjct: 10 TFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYST 69
Query: 474 ------------------KKGHL---VFDNIEGRDLISWNSLISGYGMHGLGDNALTTFD 512
K H+ +FD I D +S+N+LISGY A+ F
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 513 EMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYA----CLVDL 568
M K G + D T ++AC R + + F + + Y+ V
Sbjct: 130 RMRKLGFEVDGFTLSGLIAAC-------CDRVDLIKQLHCFSVSGGFDSYSSVNNAFVTY 182
Query: 569 LGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKD 606
+ GLL+EA + M +E W +++ + HK+
Sbjct: 183 YSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKE 220
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 310 bits (795), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 199/661 (30%), Positives = 330/661 (49%), Gaps = 83/661 (12%)
Query: 47 FITLLQQCSTLQQA---RQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F L CS + + RQ+H + + P++ L+++Y++ G V A+ VF+ V
Sbjct: 275 FTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVV 334
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
+RL+ +WN+++ A + Y A++++ MR+ PD FTL +I CS LG +
Sbjct: 335 DKRLE---IWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNY 391
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
+ VH + ++ + + L+ +Y K G DA
Sbjct: 392 GKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDA------------------------ 427
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
+FK ME +D V W SL+S + G + E L++F M+ + ++
Sbjct: 428 -------YLVFKSMEEKDM----VAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDS 476
Query: 284 --LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFD 341
+ V + CA + + ++HG +IK G +FV ++LID Y K
Sbjct: 477 DIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSK------------- 523
Query: 342 IKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKG 401
GL E A V + N+++W+++IS ++
Sbjct: 524 ------------------CGLPEMALKVFTSMSTE---------NMVAWNSMISCYSRNN 556
Query: 402 CGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGN 461
E S++LF M + P+ V+ ++VL + A+L G+ LHGY +R + + + N
Sbjct: 557 LPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKN 616
Query: 462 GLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKP 521
LI+MY+KCG K +F ++ + LI+WN +I GYG HG AL+ FDEM KAG P
Sbjct: 617 ALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESP 676
Query: 522 DHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI 581
D VTF++ +SAC+H+G V G+N+F M +++ IEP +EHYA +VDLLGRAGLL+EA
Sbjct: 677 DDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSF 736
Query: 582 VRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRW 641
++ MPIE + IW LL++ RTH + ++ +A ++L + + +++ L N+Y G
Sbjct: 737 IKAMPIEADSSIWLCLLSASRTHHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLK 796
Query: 642 EDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANE 701
++A++ K+KGL K PG SWIEV + F +G E++ +L L M +E
Sbjct: 797 NEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFNVLNRLKSNMVDE 856
Query: 702 N 702
+
Sbjct: 857 D 857
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 144/644 (22%), Positives = 266/644 (41%), Gaps = 132/644 (20%)
Query: 47 FITLLQQCSTLQQ---ARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F +LL+ CS L + +H ++ PF+A L+ +Y + G + +A +VF+
Sbjct: 63 FPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWS 122
Query: 104 FER----LDHIPLWNSIIRANVSHGYFEF-----AIEIYVGMRKFGFFPDGFTLPLIIEA 154
+ + +WNS+I GYF+F + + M FG PD F+L +++
Sbjct: 123 QSQSGVSARDVTVWNSMI-----DGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSV 177
Query: 155 CSHLGSSSLCRIVHCHALELGFRNHLH----VVNKLVGMYGKLGRMEDACQLFDGMPVRT 210
G+ H L RN L + L+ MY K G DA ++F
Sbjct: 178 MCKEGNFRREEGKQIHGFML--RNSLDTDSFLKTALIDMYFKFGLSIDAWRVF------- 228
Query: 211 ILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFK 270
+E+ED + N V W ++ G+ + +L+L+
Sbjct: 229 --------------------------VEIED-KSNVVLWNVMIVGFGGSGICESSLDLYM 261
Query: 271 LMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHK 330
L + ++ + + + C+ R+IH V+K G + +V +L+ Y K
Sbjct: 262 LAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCG 321
Query: 331 HLGDAHNVFFDIKNKNLESWNALISSYAES------------------------------ 360
+G+A VF + +K LE WNA++++YAE+
Sbjct: 322 MVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVIS 381
Query: 361 -----GLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQ- 414
GL +V +L K +P++ SA+++ ++ GC ++ +F+ M+
Sbjct: 382 CCSVLGLYNYGKSVHAELFK-----RPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEE 436
Query: 415 ------------LAK--------------------VKPNCVTFSTVLSVCAELAALNLGR 442
L K +KP+ ++V + CA L AL G
Sbjct: 437 KDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGL 496
Query: 443 ELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHG 502
++HG ++ + N+ VG+ LI++Y KCG + VF ++ ++++WNS+IS Y +
Sbjct: 497 QVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNN 556
Query: 503 LGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHY 562
L + ++ F+ M+ G+ PD V+ + L A S + G++L +R I
Sbjct: 557 LPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLR-LGIPSDTHLK 615
Query: 563 ACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKD 606
L+D+ + G + A +I + M + W ++ +H D
Sbjct: 616 NALIDMYVKCGFSKYAENIFKKMQ-HKSLITWNLMIYGYGSHGD 658
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 127/503 (25%), Positives = 218/503 (43%), Gaps = 87/503 (17%)
Query: 114 NSIIRANVSHGYFEFAIEIYVGMRKFG-FFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL 172
NS IRA + G + A+ +Y F+ FT P +++ACS L + S + +H +
Sbjct: 28 NSGIRALIQKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVV 87
Query: 173 ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDG-------MPVRTILSWNTMVSGYAFNH 225
LG+R + LV MY K G ++ A Q+FDG + R + WN+M+ GY F
Sbjct: 88 VLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGY-FK- 145
Query: 226 DCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALA 285
F+R + E + F+ M G A +L+
Sbjct: 146 --------FRR-------------------------FKEGVGCFRRMLVFGVRPDAFSLS 172
Query: 286 VVISVCADVVEVDR--SREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
+V+SV R ++IHG++++ + F+K ALID Y K
Sbjct: 173 IVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMYFKF-------------- 218
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
GL +A V +++E + NV+ W+ +I GF G
Sbjct: 219 -----------------GLSIDAWRVFVEIED--------KSNVVLWNVMIVGFGGSGIC 253
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
E SL+L+ + VK +F+ L C++ GR++H V+ + ++ V L
Sbjct: 254 ESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSL 313
Query: 464 INMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDH 523
++MY KCG + VF + + L WN++++ Y + G +AL F M + + PD
Sbjct: 314 LSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDS 373
Query: 524 VTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVR 583
T +S CS GL G+++ ++ + I+ T + L+ L + G +A + +
Sbjct: 374 FTLSNVISCCSVLGLYNYGKSVHAELFKR-PIQSTSTIESALLTLYSKCGCDPDAYLVFK 432
Query: 584 NMPIEPNEYIWGALLNS-CRTHK 605
+M E + WG+L++ C+ K
Sbjct: 433 SME-EKDMVAWGSLISGLCKNGK 454
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/354 (27%), Positives = 164/354 (46%), Gaps = 31/354 (8%)
Query: 45 DFFITLLQQCSTLQQAR---QLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNA 101
D ++ C+ L+ R Q+H I T F+ + LI LY++ G A KVF +
Sbjct: 477 DIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTS 536
Query: 102 VPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSS 161
+ E ++ WNS+I + E +I+++ M G FPD ++ ++ A S S
Sbjct: 537 MSTE---NMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASL 593
Query: 162 SLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGY 221
+ +H + L LG + H+ N L+ MY K G + A +F M +++++WN M+ GY
Sbjct: 594 LKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGY 653
Query: 222 AFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTR-GCEIS 280
+ DC+ A +F M+ P+ VT+ SL+S+ G +E +F+ M+ G E +
Sbjct: 654 GSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPN 713
Query: 281 AEALAVVISVC--ADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNV 338
E A ++ + A ++E E + ++ E + L+ R H HNV
Sbjct: 714 MEHYANMVDLLGRAGLLE-----EAYSFIKAMPIEADSSIWLCLLSASRTH------HNV 762
Query: 339 FFDI---------KNKNLESWNALISSYAESGLCEEAHAVL-LQLEKSLDGHQP 382
I + + ++ LI+ Y E+GL EA +L L EK L QP
Sbjct: 763 ELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLH-KQP 815
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 310 bits (794), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 195/656 (29%), Positives = 322/656 (49%), Gaps = 84/656 (12%)
Query: 47 FITLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F +L+ C L + +++H + + LI +Y + G V A+ +F+ +P
Sbjct: 199 FPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMP 258
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
R D I WN++I +G +E++ MR PD TL +I AC LG L
Sbjct: 259 --RRDIIS-WNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRL 315
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
R +H + + GF + V N L MY G SW
Sbjct: 316 GRDIHAYVITTGFAVDISVCNSLTQMYLNAG------------------SWRE------- 350
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
A ++F RME R + V+WT+++S ++ L D+ ++ +++M +
Sbjct: 351 ------AEKLFSRME----RKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEIT 400
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
+A V+S CA + ++D E+H IK Y+ V N LI+ Y K K + A ++F +I
Sbjct: 401 VAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFHNIP 460
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
R NVISW+++I+G
Sbjct: 461 ----------------------------------------RKNVISWTSIIAGLRLNNRC 480
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
E+L R+M++ ++PN +T + L+ CA + AL G+E+H + +R + + + N L
Sbjct: 481 FEALIFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNAL 539
Query: 464 INMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDH 523
++MY++CG F N + +D+ SWN L++GY G G + FD M+K+ ++PD
Sbjct: 540 LDMYVRCGRMNTAWSQF-NSQKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDE 598
Query: 524 VTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVR 583
+TF++ L CS + +V G F +M ++ + P ++HYAC+VDLLGRAG LQEA+ ++
Sbjct: 599 ITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRAGELQEAHKFIQ 657
Query: 584 NMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWED 643
MP+ P+ +WGALLN+CR H + E +A I L+ + G ++LL N+YA G+W +
Sbjct: 658 KMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWRE 717
Query: 644 SARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMA 699
A+VR K+ GL G SW+EV+ KV+ F + + H E+ +LE +M+
Sbjct: 718 VAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMS 773
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 140/512 (27%), Positives = 229/512 (44%), Gaps = 83/512 (16%)
Query: 44 EDFFITLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFN 100
ED F+ L++ C ++ +++S + + + L +A++ RFG++ A VF
Sbjct: 94 EDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVELGNAFLAMFVRFGNLVDAWYVFG 153
Query: 101 AVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFG-FFPDGFTLPLIIEACSHLG 159
+ ER ++ WN ++ GYF+ A+ +Y M G PD +T P ++ C +
Sbjct: 154 KMS-ER--NLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIP 210
Query: 160 SSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVS 219
+ + VH H + G+ + VVN L+ MY K G ++ A LFD MP R I+SWN M+S
Sbjct: 211 DLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMIS 270
Query: 220 GYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEI 279
GY N C E LELF MR +
Sbjct: 271 GYFENGMC-----------------------------------HEGLELFFAMRGLSVDP 295
Query: 280 SAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVF 339
L VIS C + + R+IH YVI G+ + V N+L Y +A +F
Sbjct: 296 DLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLF 355
Query: 340 FDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFAS 399
++ K++ SW +IS Y + L ++A + + +D ++P+ I+ +AV
Sbjct: 356 SRMERKDIVSWTTMISGYEYNFLPDKA----IDTYRMMD-QDSVKPDEITVAAV------ 404
Query: 400 KGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILV 459
LS CA L L+ G ELH A++ + ++V
Sbjct: 405 -----------------------------LSACATLGDLDTGVELHKLAIKARLISYVIV 435
Query: 460 GNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGM 519
N LINMY KC K +F NI +++ISW S+I+G ++ AL +M K +
Sbjct: 436 ANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM-KMTL 494
Query: 520 KPDHVTFVTALSACSHAGLVAAGRNLFYQMVR 551
+P+ +T AL+AC+ G + G+ + ++R
Sbjct: 495 QPNAITLTAALAACARIGALMCGKEIHAHVLR 526
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 111/202 (54%), Gaps = 4/202 (1%)
Query: 386 NVISWSAVISGFASKGCGEESLELFRRM-QLAKVKPNCVTFSTVLSVCAELAALNLGREL 444
N+ SW+ ++ G+A +G +E++ L+ RM + VKP+ TF VL C + L G+E+
Sbjct: 159 NLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEV 218
Query: 445 HGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLG 504
H + VR + +I V N LI MY+KCGD K L+FD + RD+ISWN++ISGY +G+
Sbjct: 219 HVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMC 278
Query: 505 DNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLF-YQMVREFRIEPTVEHYA 563
L F M + PD +T + +SAC G GR++ Y + F ++ +V +
Sbjct: 279 HEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCN-- 336
Query: 564 CLVDLLGRAGLLQEANDIVRNM 585
L + AG +EA + M
Sbjct: 337 SLTQMYLNAGSWREAEKLFSRM 358
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 92/194 (47%), Gaps = 2/194 (1%)
Query: 394 ISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLM 453
+ G + G EE+++L MQ +V + F ++ +C A G +++ A+ ++
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 454 DDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDE 513
+ +GN + M+++ G+ VF + R+L SWN L+ GY G D A+ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHR 185
Query: 514 MI-KAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRA 572
M+ G+KPD TF L C +A G+ + +VR + E ++ L+ + +
Sbjct: 186 MLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVR-YGYELDIDVVNALITMYVKC 244
Query: 573 GLLQEANDIVRNMP 586
G ++ A + MP
Sbjct: 245 GDVKSARLLFDRMP 258
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 309 bits (791), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 191/653 (29%), Positives = 315/653 (48%), Gaps = 81/653 (12%)
Query: 55 STLQQARQLHSQTILT-AAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLW 113
S+++ R +H++ + T + PFLA LI +Y++ A+ V P ++ W
Sbjct: 20 SSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLRLTPAR---NVVSW 76
Query: 114 NSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALE 173
S+I +G+F A+ + MR+ G P+ FT P +A + L + +H A++
Sbjct: 77 TSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVK 136
Query: 174 LGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRI 233
G + V MY K +DA +LFD +P R + +WN +S + A
Sbjct: 137 CGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEA 196
Query: 234 FKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCAD 293
F D PNS+T+ + L++ C+D
Sbjct: 197 FIEFRRIDGHPNSITFCAFLNA-----------------------------------CSD 221
Query: 294 VVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNAL 353
+ ++ ++HG V++ G++ + V N LID Y K K + + +F ++ KN
Sbjct: 222 WLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKN------- 274
Query: 354 ISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM 413
+SW ++++ + E++ L+ R
Sbjct: 275 ---------------------------------AVSWCSLVAAYVQNHEDEKASVLYLRS 301
Query: 414 QLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDF 473
+ V+ + S+VLS CA +A L LGR +H +AV+ ++ I VG+ L++MY KCG
Sbjct: 302 RKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCI 361
Query: 474 KKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIK--AGMKPDHVTFVTALS 531
+ FD + ++L++ NSLI GY G D AL F+EM G P+++TFV+ LS
Sbjct: 362 EDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLS 421
Query: 532 ACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNE 591
ACS AG V G +F M + IEP EHY+C+VD+LGRAG+++ A + ++ MPI+P
Sbjct: 422 ACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTI 481
Query: 592 YIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISA 651
+WGAL N+CR H ++ A + L+ + +G+ +LLSN +AA GRW ++ VR
Sbjct: 482 SVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEL 541
Query: 652 KKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENYE 704
K G+KK G SWI V+ +V+ F A + H+ E+ L +L +M Y+
Sbjct: 542 KGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYK 594
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 156/338 (46%), Gaps = 17/338 (5%)
Query: 47 FITLLQQCST---LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F L CS L QLH + + + LI Y + + ++ +F +
Sbjct: 212 FCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMG 271
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
+ + W S++ A V + E A +Y+ RK F + ++ AC+ + L
Sbjct: 272 TK---NAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLEL 328
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
R +H HA++ + V + LV MYGK G +ED+ Q FD MP + +++ N+++ GYA
Sbjct: 329 GRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAH 388
Query: 224 NHDCVGASRIFKRMELEDW--RPNSVTWTSLLSSHKRCGLYDETLELFKLMR-TRGCEIS 280
A +F+ M PN +T+ SLLS+ R G + +++F MR T G E
Sbjct: 389 QGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPG 448
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKH--KHLG--DAH 336
AE + ++ + V+R+ E ++ K + + V AL + R H LG A
Sbjct: 449 AEHYSCIVDMLGRAGMVERAYE---FIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAE 505
Query: 337 NVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLE 374
N+ F + K+ + L +++A +G EA+ V +L+
Sbjct: 506 NL-FKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELK 542
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 308 bits (788), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 193/625 (30%), Positives = 311/625 (49%), Gaps = 86/625 (13%)
Query: 50 LLQQCSTLQ---QARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
+L+ C+ L+ + +HS + ++ L+ YA+ G + A KVF+ +P +
Sbjct: 109 VLKACAGLRAIDDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMP--K 166
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKF-GFFPDGFTLPLIIEACSHLGSSSLCR 165
D + WN++I H I +++ MR+ G P+ T+ + A G+ +
Sbjct: 167 RDMVA-WNAMISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGK 225
Query: 166 IVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNH 225
VH + +GF N L V ++ +Y K C ++
Sbjct: 226 AVHGYCTRMGFSNDLVVKTGILDVYAK-----SKCIIY---------------------- 258
Query: 226 DCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELF--KLMRTRGCEISAEA 283
A R+F D++ N VTW++++ + + E E+F L+ ++ A
Sbjct: 259 ----ARRVFDL----DFKKNEVTWSAMIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVA 310
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
+ +++ CA ++ R +H Y +K G+ L V+N +I Y K+ L DA F +I
Sbjct: 311 IGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIG 370
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
K+ VIS++++I+G
Sbjct: 371 LKD----------------------------------------VISYNSLITGCVVNCRP 390
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
EES LF M+ + ++P+ T VL+ C+ LAAL G HGY V + N + N L
Sbjct: 391 EESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHGYAVNTSICNAL 450
Query: 464 INMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDH 523
++MY KCG VFD + RD++SWN+++ G+G+HGLG AL+ F+ M + G+ PD
Sbjct: 451 MDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFNSMQETGVNPDE 510
Query: 524 VTFVTALSACSHAGLVAAGRNLFYQMVR-EFRIEPTVEHYACLVDLLGRAGLLQEANDIV 582
VT + LSACSH+GLV G+ LF M R +F + P ++HY C+ DLL RAG L EA D V
Sbjct: 511 VTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLARAGYLDEAYDFV 570
Query: 583 RNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWE 642
MP EP+ + G LL++C T+K+ ++ E + ++ +L + T S +LLSN Y+A RWE
Sbjct: 571 NKMPFEPDIRVLGTLLSACWTYKNAELGNEVSKKMQSLG-ETTESLVLLSNTYSAAERWE 629
Query: 643 DSARVRISAKKKGLKKTPGQSWIEV 667
D+AR+R+ KK+GL KTPG SW++V
Sbjct: 630 DAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 176 bits (446), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 140/534 (26%), Positives = 233/534 (43%), Gaps = 94/534 (17%)
Query: 57 LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSI 116
L+++ L S T+L L LYA V A+ VF+ +P R++ I W+ +
Sbjct: 26 LKRSLTLSSSTVLV----------NLTRLYASCNEVELARHVFDEIPHPRINPIA-WDLM 74
Query: 117 IRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGF 176
IRA S+ + E A+++Y M G P +T P +++AC+ L + +++H H F
Sbjct: 75 IRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSDF 134
Query: 177 RNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN---HDCVGASRI 233
++V LV Y K G +E A ++FD MP R +++WN M+SG++ + D +G
Sbjct: 135 ATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFLD 194
Query: 234 FKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCAD 293
+R ++ PN T + + R G E
Sbjct: 195 MRR--IDGLSPNLSTIVGMFPALGRAGALRE----------------------------- 223
Query: 294 VVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVF-FDIKNKNLESWNA 352
+ +HGY + G+ + L VK ++D Y K K + A VF D K KN +W+A
Sbjct: 224 ------GKAVHGYCTRMGFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFK-KNEVTWSA 276
Query: 353 LISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRR 412
+I Y E+ + +EA GE ++
Sbjct: 277 MIGGYVENEMIKEA------------------------------------GEVFFQMLVN 300
Query: 413 MQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGD 472
+A V P V +L CA L+ GR +H YAV+ ++ V N +I+ Y K G
Sbjct: 301 DNVAMVTP--VAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGS 358
Query: 473 FKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSA 532
F I +D+IS+NSLI+G ++ + + F EM +G++PD T + L+A
Sbjct: 359 LCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTA 418
Query: 533 CSHAGLVAAGRNLF-YQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM 585
CSH + G + Y +V + + ++ + L+D+ + G L A + M
Sbjct: 419 CSHLAALGHGSSCHGYCVVHGYAVNTSICN--ALMDMYTKCGKLDVAKRVFDTM 470
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 119/237 (50%), Gaps = 5/237 (2%)
Query: 384 RPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRE 443
R N I+W +I +AS E++L+L+ +M + V+P T+ VL CA L A++ G+
Sbjct: 65 RINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKL 124
Query: 444 LHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGL 503
+H + + ++ V L++ Y KCG+ + VFD + RD+++WN++ISG+ +H
Sbjct: 125 IHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCC 184
Query: 504 GDNALTTFDEMIKA-GMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVR-EFRIEPTVEH 561
+ + F +M + G+ P+ T V A AG + G+ + R F + V+
Sbjct: 185 LTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVK- 243
Query: 562 YACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQIL 618
++D+ ++ + A + ++ + NE W A++ ++ K E Q+L
Sbjct: 244 -TGILDVYAKSKCIIYARRVF-DLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML 298
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 307 bits (786), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 177/556 (31%), Positives = 289/556 (51%), Gaps = 51/556 (9%)
Query: 152 IEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTI 211
++ C+ + + + +H H ++LG + N LV +YGK G A Q+FD MP R
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 212 LSWNTMVSGYAFNHDCVGASRIFKRMELED---WRPNSVTWTSLLSSHKRCGLYDETLEL 268
++W ++++ A N + + + RP+ +++L
Sbjct: 70 IAWASVLT--ALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSAL---------------- 111
Query: 269 FKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRK 328
+ CA++ +D R++H + I Y + VK++L+D Y K
Sbjct: 112 -------------------VKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAK 152
Query: 329 HKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVI 388
L A VF I+ KN SW A++S YA+SG EEA L+L + L P++ N+
Sbjct: 153 CGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEA----LELFRIL----PVK-NLY 203
Query: 389 SWSAVISGFASKGCGEESLELFRRMQLAKVKP-NCVTFSTVLSVCAELAALNLGRELHGY 447
SW+A+ISGF G G E+ +F M+ +V + + S+++ CA LAA GR++HG
Sbjct: 204 SWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGL 263
Query: 448 AVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNA 507
+ D + + N LI+MY KC D +F + RD++SW SLI G HG + A
Sbjct: 264 VIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKA 323
Query: 508 LTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVD 567
L +D+M+ G+KP+ VTFV + ACSH G V GR LF M +++ I P+++HY CL+D
Sbjct: 324 LALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLD 383
Query: 568 LLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQIL-TLNSQITG 626
LLGR+GLL EA +++ MP P+E W ALL++C+ ++ A ++ + +
Sbjct: 384 LLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPS 443
Query: 627 SFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDE 686
+++LLSNIYA+ W + R + ++K PG S +EVRK+ F AG H ++
Sbjct: 444 TYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKED 503
Query: 687 VYVILEELALQMANEN 702
++ +L++L +M N
Sbjct: 504 IFRLLKKLEEEMRIRN 519
Score = 158 bits (399), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 116/404 (28%), Positives = 202/404 (50%), Gaps = 18/404 (4%)
Query: 47 FITLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
++ LQ C+ TL A+ LH+ + + LA L+ +Y + G+ SHA +VF+ +P
Sbjct: 6 YLHQLQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMP 65
Query: 104 FERLDHIPLWNSIIRA-NVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSS 162
DHI W S++ A N ++ + G PD F +++AC++LGS
Sbjct: 66 HR--DHIA-WASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSID 122
Query: 163 LCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYA 222
R VHCH + + N V + LV MY K G + A +FD + V+ +SW MVSGYA
Sbjct: 123 HGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYA 182
Query: 223 FNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEI-SA 281
+ A +F+ + ++ N +WT+L+S + G E +F MR +I
Sbjct: 183 KSGRKEEALELFRILPVK----NLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDP 238
Query: 282 EALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFD 341
L+ ++ CA++ R++HG VI G++ +F+ NALID Y K + A ++F
Sbjct: 239 LVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSR 298
Query: 342 IKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKG 401
++++++ SW +LI A+ G E+A L L + H ++PN +++ +I + G
Sbjct: 299 MRHRDVVSWTSLIVGMAQHGQAEKA----LALYDDMVSHG-VKPNEVTFVGLIYACSHVG 353
Query: 402 CGEESLELFRRM-QLAKVKPNCVTFSTVLSVCAELAALNLGREL 444
E+ ELF+ M + ++P+ ++ +L + L+ L
Sbjct: 354 FVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENL 397
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 306 bits (785), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 173/661 (26%), Positives = 323/661 (48%), Gaps = 82/661 (12%)
Query: 47 FITLLQQCST---LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F +L C++ + QLH +++ + + L+++Y++ G A K+F +
Sbjct: 242 FDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMM- 300
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
R D + WN +I V G E ++ + M G PD T ++ + S +
Sbjct: 301 -SRADTVT-WNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEY 358
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
C+ +HC+ + + + + L+ Y K + A +F ++ + M+SGY
Sbjct: 359 CKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLH 418
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
N GLY ++LE+F+ + +
Sbjct: 419 N-----------------------------------GLYIDSLEMFRWLVKVKISPNEIT 443
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
L ++ V ++ + RE+HG++IK G+++ + A+ID Y K + A+ +F +
Sbjct: 444 LVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS 503
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
++ ++SW+++I+ A
Sbjct: 504 KRD----------------------------------------IVSWNSMITRCAQSDNP 523
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
++++FR+M ++ + +CV+ S LS CA L + + G+ +HG+ +++ + ++ + L
Sbjct: 524 SAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTL 583
Query: 464 INMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMI-KAGMKPD 522
I+MY KCG+ K VF ++ ++++SWNS+I+ G HG ++L F EM+ K+G++PD
Sbjct: 584 IDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPD 643
Query: 523 HVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIV 582
+TF+ +S+C H G V G F M ++ I+P EHYAC+VDL GRAG L EA + V
Sbjct: 644 QITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETV 703
Query: 583 RNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWE 642
++MP P+ +WG LL +CR HK+ ++ E +S+++ L+ +G ++L+SN +A WE
Sbjct: 704 KSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLMDLDPSNSGYYVLISNAHANAREWE 763
Query: 643 DSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANEN 702
+VR K++ ++K PG SWIE+ K+ + F +G++ H +Y +L L ++ E
Sbjct: 764 SVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIYSLLNSLLGELRLEG 823
Query: 703 Y 703
Y
Sbjct: 824 Y 824
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 131/555 (23%), Positives = 236/555 (42%), Gaps = 81/555 (14%)
Query: 50 LLQQCST---LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
LLQ CS L+Q +Q+H+ I+ + + +++ +YA GS S K+F + R
Sbjct: 41 LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLDLRR 100
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRI 166
P WNSII + V +G A+ Y M FG PD T P +++AC L +
Sbjct: 101 SSIRP-WNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDF 159
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHD 226
+ LG + V + L+ Y + G+++ +LFD + + + WN M++GYA
Sbjct: 160 LSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGA 219
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
+ F M ++ PN+VT+
Sbjct: 220 LDSVIKGFSVMRMDQISPNAVTFD-----------------------------------C 244
Query: 287 VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKN 346
V+SVCA + +D ++HG V+ G + +KN+L+ Y K DA +F + +
Sbjct: 245 VLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRAD 304
Query: 347 LESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEES 406
+WN +IS Y +SGL E ES
Sbjct: 305 TVTWNCMISGYVQSGLME----------------------------------------ES 324
Query: 407 LELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINM 466
L F M + V P+ +TFS++L ++ L +++H Y +R+ + +I + + LI+
Sbjct: 325 LTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDA 384
Query: 467 YMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTF 526
Y KC +F D++ + ++ISGY +GL ++L F ++K + P+ +T
Sbjct: 385 YFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITL 444
Query: 527 VTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMP 586
V+ L + GR L ++++ + ++D+ + G + A +I +
Sbjct: 445 VSILPVIGILLALKLGRELHGFIIKK-GFDNRCNIGCAVIDMYAKCGRMNLAYEIFERLS 503
Query: 587 IEPNEYIWGALLNSC 601
+ + W +++ C
Sbjct: 504 -KRDIVSWNSMITRC 517
Score = 120 bits (301), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/387 (24%), Positives = 160/387 (41%), Gaps = 73/387 (18%)
Query: 148 LPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMP 207
L L+++ACS+ + VH + + +++GMY G D
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDC-------- 89
Query: 208 VRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLE 267
++F R++L R + W S++SS R GL ++ L
Sbjct: 90 -----------------------GKMFYRLDLR--RSSIRPWNSIISSFVRNGLLNQALA 124
Query: 268 LFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYR 327
+ M G ++ C + + V G + FV ++LI Y
Sbjct: 125 FYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYL 184
Query: 328 KHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNV 387
++ + D + FD + L+ +
Sbjct: 185 EYGKI-DVPSKLFD---------------------------------------RVLQKDC 204
Query: 388 ISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGY 447
+ W+ +++G+A G + ++ F M++ ++ PN VTF VLSVCA ++LG +LHG
Sbjct: 205 VIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGL 264
Query: 448 AVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNA 507
V + +D + N L++MY KCG F +F + D ++WN +ISGY GL + +
Sbjct: 265 VVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEES 324
Query: 508 LTTFDEMIKAGMKPDHVTFVTALSACS 534
LT F EMI +G+ PD +TF + L + S
Sbjct: 325 LTFFYEMISSGVLPDAITFSSLLPSVS 351
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 306 bits (784), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 195/625 (31%), Positives = 304/625 (48%), Gaps = 81/625 (12%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP-FE 105
+T+L Q TL +Q+H++ I+ + L + L Y + + A FN +P ++
Sbjct: 10 LLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWK 69
Query: 106 RLDHIPLWNSIIR--ANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
R H WN+I+ + + + +Y MR+ D F L I+AC LG
Sbjct: 70 RNRHS--WNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLEN 127
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
++H A++ G +V LV MY +LG ME A ++FD +PVR
Sbjct: 128 GILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVR-------------- 173
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
NSV W L+ + + E LF LMR G + A
Sbjct: 174 ---------------------NSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALT 212
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYL-FVKNALIDTYRKHKHLGDAHNVFFDI 342
L ++ C +V + +HG I+ + D +++ ++ID Y K + L +A +F
Sbjct: 213 LICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLF--- 269
Query: 343 KNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGC 402
E S+D NV+ W+ +ISGFA
Sbjct: 270 -------------------------------ETSVD------RNVVMWTTLISGFAKCER 292
Query: 403 GEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNG 462
E+ +LFR+M + PN T + +L C+ L +L G+ +HGY +RN ++ + +
Sbjct: 293 AVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTS 352
Query: 463 LINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPD 522
I+MY +CG+ + VFD + R++ISW+S+I+ +G++GL + AL F +M + P+
Sbjct: 353 FIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFHKMKSQNVVPN 412
Query: 523 HVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIV 582
VTFV+ LSACSH+G V G F M R++ + P EHYAC+VDLLGRAG + EA +
Sbjct: 413 SVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFI 472
Query: 583 RNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWE 642
NMP++P WGALL++CR HK+ + E A ++L++ + + ++LLSNIYA G WE
Sbjct: 473 DNMPVKPMASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWE 532
Query: 643 DSARVRISAKKKGLKKTPGQSWIEV 667
VR KG +K GQS EV
Sbjct: 533 MVNCVRRKMGIKGYRKHVGQSATEV 557
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 306 bits (783), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 182/642 (28%), Positives = 320/642 (49%), Gaps = 85/642 (13%)
Query: 47 FITLLQQCSTL---QQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
+++L+ C+ Q Q+H + + + + LI +Y + A KVF+++P
Sbjct: 9 LVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
ER ++ W++++ +V +G + ++ ++ M + G +P+ FT ++AC L +
Sbjct: 69 -ER--NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEK 125
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
+H L++GF + V N LV MY K GR+ +A ++F + R+++SWN M++G+
Sbjct: 126 GLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVH 185
Query: 224 NHDCVGASRIFKRMELEDW--RPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISA 281
A F M+ + RP+ T TSLL +
Sbjct: 186 AGYGSKALDTFGMMQEANIKERPDEFTLTSLLKA-------------------------- 219
Query: 282 EALAVVISVCADVVEVDRSREIHGYVIKGGYE--DYLFVKNALIDTYRKHKHLGDAHNVF 339
C+ + ++IHG++++ G+ + +L+D Y K +L A F
Sbjct: 220 ---------CSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAF 270
Query: 340 FDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFAS 399
IK K + ISWS++I G+A
Sbjct: 271 DQIKEKTM----------------------------------------ISWSSLILGYAQ 290
Query: 400 KGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILV 459
+G E++ LF+R+Q + + S+++ V A+ A L G+++ AV+ V
Sbjct: 291 EGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV 350
Query: 460 GNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGM 519
N +++MY+KCG + F ++ +D+ISW +I+GYG HGLG ++ F EM++ +
Sbjct: 351 LNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNI 410
Query: 520 KPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAN 579
+PD V ++ LSACSH+G++ G LF +++ I+P VEHYAC+VDLLGRAG L+EA
Sbjct: 411 EPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAK 470
Query: 580 DIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANG 639
++ MPI+PN IW LL+ CR H D ++ +E +L ++++ +++++SN+Y G
Sbjct: 471 HLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAG 530
Query: 640 RWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVH 681
W + R KGLKK G SW+E+ ++V+ F +G H
Sbjct: 531 YWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSH 572
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 305 bits (782), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 194/653 (29%), Positives = 314/653 (48%), Gaps = 89/653 (13%)
Query: 56 TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNS 115
++Q + LH + + + L+A+Y +F + A++VF D + + +S
Sbjct: 222 VVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVF--------DEMDVRDS 273
Query: 116 IIRANVSHGYFEFAIEIYVGMRKF-----GFFPDGFTLPLIIEACSHLGSSSLCRIVHCH 170
+ + GY + + + +R F F PD T+ ++ AC HL SL + ++ +
Sbjct: 274 VSYNTMICGYLKLEM-VEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNY 332
Query: 171 ALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGA 230
L+ GF V N L+ +Y K G D + A
Sbjct: 333 MLKAGFVLESTVRNILIDVYAKCG-------------------------------DMITA 361
Query: 231 SRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISV 290
+F ME +D +V+W S++S + + G E ++LFK+M + ++ISV
Sbjct: 362 RDVFNSMECKD----TVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISV 417
Query: 291 CADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESW 350
+ ++ + +H IK G L V NALID Y K +GD+ +F + +
Sbjct: 418 STRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFSSMGTGD---- 473
Query: 351 NALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELF 410
++W+ VIS G L++
Sbjct: 474 ------------------------------------TVTWNTVISACVRFGDFATGLQVT 497
Query: 411 RRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKC 470
+M+ ++V P+ TF L +CA LAA LG+E+H +R + + +GN LI MY KC
Sbjct: 498 TQMRKSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKC 557
Query: 471 GDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTAL 530
G + VF+ + RD+++W +I YGM+G G+ AL TF +M K+G+ PD V F+ +
Sbjct: 558 GCLENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAII 617
Query: 531 SACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPN 590
ACSH+GLV G F +M ++I+P +EHYAC+VDLL R+ + +A + ++ MPI+P+
Sbjct: 618 YACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPD 677
Query: 591 EYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRIS 650
IW ++L +CRT D + E + +I+ LN G +L SN YAA +W+ + +R S
Sbjct: 678 ASIWASVLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKS 737
Query: 651 AKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
K K + K PG SWIEV K V+ FS+G+ + +Y LE L MA E Y
Sbjct: 738 LKDKHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGY 790
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 148/573 (25%), Positives = 262/573 (45%), Gaps = 82/573 (14%)
Query: 46 FFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
F L S L + R++H+ I F + KLI Y+ F + + VF V
Sbjct: 9 FISRALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPA 68
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCR 165
+ ++ LWNSIIRA +G F A+E Y +R+ PD +T P +I+AC+ L + +
Sbjct: 69 K--NVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 166 IVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNH 225
+V+ L++GF + L V N LV MY ++G + A Q+FD MPVR ++SWN+++SGY
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGY---- 182
Query: 226 DCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALA 285
SSH G Y+E LE++ ++ + ++
Sbjct: 183 ----------------------------SSH---GYYEEALEIYHELKNSWIVPDSFTVS 211
Query: 286 VVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK 345
V+ +++ V + + +HG+ +K G + V N L+ Y K + DA VF ++ +
Sbjct: 212 SVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVR 271
Query: 346 NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEE 405
+ S+N +I Y + + EE+ + L+
Sbjct: 272 DSVSYNTMICGYLKLEMVEESVRMFLE--------------------------------- 298
Query: 406 SLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLIN 465
L + KP+ +T S+VL C L L+L + ++ Y ++ V N LI+
Sbjct: 299 --------NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILID 350
Query: 466 MYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVT 525
+Y KCGD VF+++E +D +SWNS+ISGY G A+ F M+ + DH+T
Sbjct: 351 VYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHIT 410
Query: 526 FVTALSACSHAGLVAAGRNLFYQMVRE-FRIEPTVEHYACLVDLLGRAGLLQEANDIVRN 584
++ +S + + G+ L ++ I+ +V + L+D+ + G + ++ I +
Sbjct: 411 YLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSN--ALIDMYAKCGEVGDSLKIFSS 468
Query: 585 MPIEPNEYIWGALLNSCRTHKDTKIVEETASQI 617
M + W ++++C D + +Q+
Sbjct: 469 MGT-GDTVTWNTVISACVRFGDFATGLQVTTQM 500
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 305 bits (781), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 179/554 (32%), Positives = 287/554 (51%), Gaps = 75/554 (13%)
Query: 184 NKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWR 243
N +V Y G ++A QLFD M R ++SWN +VSGY N V A +F+ M
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMP----E 107
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREI 303
N V+WT+++ + + G+ E LF M R E+S V+ D +D++R++
Sbjct: 108 RNVVSWTAMVKGYMQEGMVGEAESLFWRMPERN-EVS---WTVMFGGLIDDGRIDKARKL 163
Query: 304 HGYVIKGGYEDYLFVKNALIDTYR-----KHKHLGDAHNVFFDIKNKNLESWNALISSYA 358
+ D + VK+ + T + + +A +F +++ +N+ +W +I+ Y
Sbjct: 164 Y---------DMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYR 214
Query: 359 ESGLCEEAHAVL-------------LQLEKSLDGH----------QPLRPNVI------- 388
++ + A + + L +L G P++P +
Sbjct: 215 QNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVG 274
Query: 389 -----------------------SWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTF 425
+W +I + KG E+L+LF +MQ V+P+ +
Sbjct: 275 FGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSL 334
Query: 426 STVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEG 485
++LSVCA LA+L GR++H + VR DD++ V + L+ MY+KCG+ K LVFD
Sbjct: 335 ISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSS 394
Query: 486 RDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNL 545
+D+I WNS+ISGY HGLG+ AL F EM +G P+ VT + L+ACS+AG + G +
Sbjct: 395 KDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEI 454
Query: 546 FYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHK 605
F M +F + PTVEHY+C VD+LGRAG + +A +++ +M I+P+ +WGALL +C+TH
Sbjct: 455 FESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHS 514
Query: 606 DTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWI 665
+ E A ++ G+++LLS+I A+ +W D A VR + + + K PG SWI
Sbjct: 515 RLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWI 574
Query: 666 EVRKKVYTFSAGNI 679
EV KKV+ F+ G I
Sbjct: 575 EVGKKVHMFTRGGI 588
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 118/231 (51%), Gaps = 5/231 (2%)
Query: 75 KPFLAAK-LIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIY 133
KP +A +I + G +S A++VF+ + E D+ W +I+A G+ A++++
Sbjct: 263 KPVIACNAMIVGFGEVGEISKARRVFDLM--EDRDN-ATWRGMIKAYERKGFELEALDLF 319
Query: 134 VGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKL 193
M+K G P +L I+ C+ L S R VH H + F + ++V + L+ MY K
Sbjct: 320 AQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKC 379
Query: 194 GRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLL 253
G + A +FD + I+ WN+++SGYA + A +IF M PN VT ++L
Sbjct: 380 GELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAIL 439
Query: 254 SSHKRCGLYDETLELFKLMRTRGC-EISAEALAVVISVCADVVEVDRSREI 303
++ G +E LE+F+ M ++ C + E + + + +VD++ E+
Sbjct: 440 TACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMEL 490
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 139/358 (38%), Gaps = 102/358 (28%)
Query: 248 TWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYV 307
+W S++S + GL E +LF M R V+S
Sbjct: 50 SWNSIVSGYFSNGLPKEARQLFDEMSERN----------VVSW----------------- 82
Query: 308 IKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAH 367
N L+ Y K++ + +A NVF + +N+ SW A++ Y + G+ EA
Sbjct: 83 ------------NGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAE 130
Query: 368 AVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKV--------- 418
++ ++ P R N +SW+ + G G +++ +L+ M + V
Sbjct: 131 SLFWRM--------PER-NEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGG 181
Query: 419 ------------------KPNCVTFSTVLSVCAELAALNLGRELH--------------- 445
+ N VT++T+++ + +++ R+L
Sbjct: 182 LCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSML 241
Query: 446 -GYAVRNLMDD-----------NILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNS 493
GY + ++D ++ N +I + + G+ K VFD +E RD +W
Sbjct: 242 LGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRG 301
Query: 494 LISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVR 551
+I Y G AL F +M K G++P + ++ LS C+ + GR + +VR
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR 359
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 107/233 (45%), Gaps = 9/233 (3%)
Query: 47 FITLLQQCSTL---QQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
I++L C+TL Q RQ+H+ + ++A+ L+ +Y + G + A+ VF+
Sbjct: 334 LISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDR-- 391
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGS-SS 162
F D I +WNSII SHG E A++I+ M G P+ TL I+ ACS+ G
Sbjct: 392 FSSKD-IIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEE 450
Query: 163 LCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILS-WNTMVSGY 221
I + + + V M G+ G+++ A +L + M ++ + W ++ G
Sbjct: 451 GLEIFESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALL-GA 509
Query: 222 AFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRT 274
H + + + + E+ N+ T+ L S + + + + K MRT
Sbjct: 510 CKTHSRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRT 562
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/274 (20%), Positives = 123/274 (44%), Gaps = 43/274 (15%)
Query: 332 LGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKS--------LDGH--- 380
+ +A F ++ K + SWN+++S Y +GL +EA + ++ + + G+
Sbjct: 33 INEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKN 92
Query: 381 ------------QPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTV 428
P R NV+SW+A++ G+ +G E+ LF RM + N V+++ +
Sbjct: 93 RMIVEARNVFELMPER-NVVSWTAMVKGYMQEGMVGEAESLFWRMP----ERNEVSWTVM 147
Query: 429 LSVCAELAALNLGRELHGYAVRNLMD-DNILVGNGLINMYMKCGDFKKGHLVFDNIEGRD 487
+ ++ R+L+ ++M +++ +I + G + L+FD + R+
Sbjct: 148 FGGLIDDGRIDKARKLY-----DMMPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERN 202
Query: 488 LISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFY 547
+++W ++I+GY + D A F+ M + V++ + L + +G + F
Sbjct: 203 VVTWTTMITGYRQNNRVDVARKLFEVMPEK----TEVSWTSMLLGYTLSGRIEDAEEFFE 258
Query: 548 QMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI 581
M ++P + A +V G G + +A +
Sbjct: 259 VMP----MKPVIACNAMIVG-FGEVGEISKARRV 287
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 14/169 (8%)
Query: 464 INMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDH 523
I+ + G + FD+++ + + SWNS++SGY +GL A FDEM + +
Sbjct: 24 ISRLSRIGKINEARKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEMSERNV---- 79
Query: 524 VTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVR 583
V++ +S ++ RN+F E E V + +V + G++ EA +
Sbjct: 80 VSWNGLVSGYIKNRMIVEARNVF-----ELMPERNVVSWTAMVKGYMQEGMVGEAESLFW 134
Query: 584 NMPIEPNEYIW----GALLNSCRTHKDTKIVEETASQILTLNSQITGSF 628
MP E NE W G L++ R K K+ + + + ++ + G
Sbjct: 135 RMP-ERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVASTNMIGGL 182
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 96/222 (43%), Gaps = 20/222 (9%)
Query: 409 LFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYM 468
+ RR L NC S +S + + +N R+ +L I N +++ Y
Sbjct: 7 ILRRTYLTSTGVNC---SFEISRLSRIGKINEARKFFD----SLQFKAIGSWNSIVSGYF 59
Query: 469 KCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVT 528
G K+ +FD + R+++SWN L+SGY + + A F+ M + + V++
Sbjct: 60 SNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNV----VSWTA 115
Query: 529 ALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIE 588
+ G+V +LF++M + TV + L+D G + +A + MP++
Sbjct: 116 MVKGYMQEGMVGEAESLFWRMPERNEVSWTV-MFGGLID----DGRIDKARKLYDMMPVK 170
Query: 589 ---PNEYIWGALLNSCRTHKDTKIVEETASQ-ILTLNSQITG 626
+ + G L R + I +E + ++T + ITG
Sbjct: 171 DVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITG 212
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 304 bits (779), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 150/445 (33%), Positives = 259/445 (58%), Gaps = 9/445 (2%)
Query: 243 RPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSRE 302
RP++ W ++ + +L L++ M +A ++ C+++ + + +
Sbjct: 77 RPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQ 136
Query: 303 IHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGL 362
IH + K GYE+ ++ N+LI++Y + AH +F I + SWN++I Y ++G
Sbjct: 137 IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGK 196
Query: 363 CEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNC 422
+ A + ++ + N ISW+ +ISG+ +E+L+LF MQ + V+P+
Sbjct: 197 MDIALTLFRKMAEK---------NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDN 247
Query: 423 VTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDN 482
V+ + LS CA+L AL G+ +H Y + + + ++G LI+MY KCG+ ++ VF N
Sbjct: 248 VSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKN 307
Query: 483 IEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAG 542
I+ + + +W +LISGY HG G A++ F EM K G+KP+ +TF L+ACS+ GLV G
Sbjct: 308 IKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEG 367
Query: 543 RNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCR 602
+ +FY M R++ ++PT+EHY C+VDLLGRAGLL EA ++ MP++PN IWGALL +CR
Sbjct: 368 KLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACR 427
Query: 603 THKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQ 662
HK+ ++ EE ++ ++ G ++ +NI+A + +W+ +A R K++G+ K PG
Sbjct: 428 IHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGC 487
Query: 663 SWIEVRKKVYTFSAGNIVHLGLDEV 687
S I + + F AG+ H ++++
Sbjct: 488 STISLEGTTHEFLAGDRSHPEIEKI 512
Score = 159 bits (402), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 205/433 (47%), Gaps = 48/433 (11%)
Query: 48 ITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGS---VSHAQKVFNAVPF 104
++ LQ+CS ++ +Q+H++ + T + + K ++ S + +AQ VF+ F
Sbjct: 18 MSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDG--F 75
Query: 105 ERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLC 164
+R D LWN +IR E ++ +Y M + +T P +++ACS+L +
Sbjct: 76 DRPDTF-LWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEET 134
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
+H +LG+ N ++ VN L+ Y G + A LFD +P +SWN+++ GY
Sbjct: 135 TQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKA 194
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
A +F++M N+++WT+++S + + + E L+LF M+ E +L
Sbjct: 195 GKMDIALTLFRKMA----EKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSL 250
Query: 285 AVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN 344
A +S CA + +++ + IH Y+ K + LID Y K + +A VF +IK
Sbjct: 251 ANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKK 310
Query: 345 KNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGE 404
K++++W ALIS YA G EA + ++++K ++PNVI+++AV++ + G E
Sbjct: 311 KSVQAWTALISGYAYHGHGREAISKFMEMQK-----MGIKPNVITFTAVLTACSYTGLVE 365
Query: 405 ESLELF---------------------------------RRMQLAKVKPNCVTFSTVLSV 431
E +F R +Q +KPN V + +L
Sbjct: 366 EGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKA 425
Query: 432 CAELAALNLGREL 444
C + LG E+
Sbjct: 426 CRIHKNIELGEEI 438
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 304 bits (778), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 195/654 (29%), Positives = 321/654 (49%), Gaps = 61/654 (9%)
Query: 62 QLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANV 121
QLH++ ++ + FLA+KLI+ Y R A VF+ + + + +N+++ A
Sbjct: 43 QLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEIT---VRNAFSYNALLIAYT 99
Query: 122 SHGYFEFAIEIYVGMRKFGFF------PDGFTLPLIIEA---CSHLGSSSLCRIVHCHAL 172
S + A +++ + PD ++ +++A C SL R VH +
Sbjct: 100 SREMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVI 159
Query: 173 ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASR 232
GF + + V N ++ Y K +E A ++FD M R +
Sbjct: 160 RGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDV--------------------- 198
Query: 233 IFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISV-- 290
V+W S++S + + G +++ +++K M C VISV
Sbjct: 199 --------------VSWNSMISGYSQSGSFEDCKKMYKAML--ACSDFKPNGVTVISVFQ 242
Query: 291 -CADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLES 349
C ++ E+H +I+ + L + NA+I Y K L A +F ++ K+ +
Sbjct: 243 ACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVT 302
Query: 350 WNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLEL 409
+ A+IS Y GL +EA A+ ++E + +W+A+ISG EE +
Sbjct: 303 YGAIISGYMAHGLVKEAMALFSEMES---------IGLSTWNAMISGLMQNNHHEEVINS 353
Query: 410 FRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMK 469
FR M +PN VT S++L + L G+E+H +A+RN D+NI V +I+ Y K
Sbjct: 354 FREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAK 413
Query: 470 CGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTA 529
G VFDN + R LI+W ++I+ Y +HG D+A + FD+M G KPD VT
Sbjct: 414 LGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAV 473
Query: 530 LSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEP 589
LSA +H+G +++F M+ ++ IEP VEHYAC+V +L RAG L +A + + MPI+P
Sbjct: 474 LSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAMEFISKMPIDP 533
Query: 590 NEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRI 649
+WGALLN D +I ++ + + TG++ +++N+Y GRWE++ VR
Sbjct: 534 IAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRN 593
Query: 650 SAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
K+ GLKK PG SWIE K + +F A + E+Y I+E L M+++ Y
Sbjct: 594 KMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYEIIEGLVESMSDKEY 647
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 212/467 (45%), Gaps = 22/467 (4%)
Query: 60 ARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRA 119
ARQ+H I F+ +I Y + ++ A+KVF+ + ER + WNS+I
Sbjct: 151 ARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESARKVFDEMS-ER--DVVSWNSMISG 207
Query: 120 NVSHGYFEFAIEIYVGMRKFG-FFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRN 178
G FE ++Y M F P+G T+ + +AC VH +E +
Sbjct: 208 YSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQM 267
Query: 179 HLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRME 238
L + N ++G Y K G ++ A LFD M + +++ ++SGY + A +F ME
Sbjct: 268 DLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEME 327
Query: 239 LEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVD 298
TW +++S + ++E + F+ M G + L+ ++ +
Sbjct: 328 ----SIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLK 383
Query: 299 RSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYA 358
+EIH + I+ G ++ ++V ++ID Y K L A VF + K+++L +W A+I++YA
Sbjct: 384 GGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYA 443
Query: 359 ESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAK- 417
G + A ++ Q++ +P+ ++ +AV+S FA G + + +F M L K
Sbjct: 444 VHGDSDSACSLFDQMQ-----CLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSM-LTKY 497
Query: 418 -VKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKG 476
++P ++ ++SV + L+ E + + +D V L+N GD +
Sbjct: 498 DIEPGVEHYACMVSVLSRAGKLSDAME---FISKMPIDPIAKVWGALLNGASVLGDLEIA 554
Query: 477 HLVFDNI---EGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMK 520
D + E + ++ + + Y G + A ++M + G+K
Sbjct: 555 RFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMVRNKMKRIGLK 601
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 165/366 (45%), Gaps = 44/366 (12%)
Query: 48 ITLLQQC---STLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP- 103
I++ Q C S L ++H + I L +I YA+ GS+ +A+ +F+ +
Sbjct: 238 ISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSE 297
Query: 104 -------------------------FERLDHIPL--WNSIIRANVSHGYFEFAIEIYVGM 136
F ++ I L WN++I + + + E I + M
Sbjct: 298 KDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQNNHHEEVINSFREM 357
Query: 137 RKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRM 196
+ G P+ TL ++ + ++ + + +H A+ G N+++V ++ Y KLG +
Sbjct: 358 IRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIYVTTSIIDNYAKLGFL 417
Query: 197 EDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSH 256
A ++FD R++++W +++ YA + D A +F +M+ +P+ VT T++LS+
Sbjct: 418 LGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLGTKPDDVTLTAVLSAF 477
Query: 257 KRCGLYDETLELFKLMRTR-GCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDY 315
G D +F M T+ E E A ++SV + ++ + E ++ K +
Sbjct: 478 AHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDAME---FISKMPIDPI 534
Query: 316 LFVKNALIDTYRKHKHLGD------AHNVFFDIKNKNLESWNALISSYAESGLCEEAHAV 369
V AL++ LGD A + F+++ +N ++ + + Y ++G EEA V
Sbjct: 535 AKVWGALLN---GASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYTQAGRWEEAEMV 591
Query: 370 LLQLEK 375
++++
Sbjct: 592 RNKMKR 597
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 303 bits (777), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 185/599 (30%), Positives = 296/599 (49%), Gaps = 92/599 (15%)
Query: 110 IPLWNSIIRANVSHGYFEFAIEI--------YVGMRKFGFFPDGFTLPLIIEACSHLGSS 161
I LW+S+I G+F I + Y MR+ G P T P +++A L S
Sbjct: 67 IQLWDSLI------GHFSGGITLNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRDS 120
Query: 162 SLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGY 221
+ + H H ++ G + V N L+ Y G LFD
Sbjct: 121 NPFQF-HAHIVKFGLDSDPFVRNSLISGYSSSG-------LFDF---------------- 156
Query: 222 AFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISA 281
ASR+F E +D VTWT+++ R G E + F M+ G +
Sbjct: 157 --------ASRLFDGAEDKD----VVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANE 204
Query: 282 EALAVVISVCADVVEVDRSREIHG-YVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFF 340
+ V+ V +V R +HG Y+ G + +F+ ++L+D Y K DA VF
Sbjct: 205 MTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFD 264
Query: 341 DIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASK 400
++ ++N V++W+A+I+G+
Sbjct: 265 EMPSRN----------------------------------------VVTWTALIAGYVQS 284
Query: 401 GCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVG 460
C ++ + +F M + V PN T S+VLS CA + AL+ GR +H Y ++N ++ N G
Sbjct: 285 RCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAG 344
Query: 461 NGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMK 520
LI++Y+KCG ++ LVF+ + +++ +W ++I+G+ HG +A F M+ + +
Sbjct: 345 TTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVS 404
Query: 521 PDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAND 580
P+ VTF+ LSAC+H GLV GR LF M F +EP +HYAC+VDL GR GLL+EA
Sbjct: 405 PNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKA 464
Query: 581 IVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGR 640
++ MP+EP +WGAL SC HKD ++ + AS+++ L +G + LL+N+Y+ +
Sbjct: 465 LIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLANLYSESQN 524
Query: 641 WEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSA-GNIVHLGLDEVYVILEELALQM 698
W++ ARVR K + + K+PG SWIEV+ K+ F A + L D++Y L+ + +QM
Sbjct: 525 WDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDLYKTLDTVGVQM 583
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 163/371 (43%), Gaps = 46/371 (12%)
Query: 47 FITLLQQCSTLQQAR--QLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPF 104
F LL+ L+ + Q H+ + PF+ LI+ Y+ G A ++F+
Sbjct: 107 FPPLLKAVFKLRDSNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGA-- 164
Query: 105 ERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLC 164
E D + W ++I V +G A+ +V M+K G + T+ +++A +
Sbjct: 165 EDKD-VVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFG 223
Query: 165 RIVHCHALELG-FRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
R VH LE G + + + + LV MYGK +DA ++FD MP R
Sbjct: 224 RSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSR-------------- 269
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
N VTWT+L++ + + +D+ + +F+ M + +
Sbjct: 270 ---------------------NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKT 308
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
L+ V+S CA V + R R +H Y+IK E LID Y K L +A VF +
Sbjct: 309 LSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLH 368
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
KN+ +W A+I+ +A G +A + + L H + PN +++ AV+S A G
Sbjct: 369 EKNVYTWTAMINGFAAHGYARDAFDLFYTM---LSSH--VSPNEVTFMAVLSACAHGGLV 423
Query: 404 EESLELFRRMQ 414
EE LF M+
Sbjct: 424 EEGRRLFLSMK 434
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 99/199 (49%), Gaps = 3/199 (1%)
Query: 77 FLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGM 136
F+ + L+ +Y + AQKVF+ +P ++ W ++I V F+ + ++ M
Sbjct: 241 FIGSSLVDMYGKCSCYDDAQKVFDEMPSR---NVVTWTALIAGYVQSRCFDKGMLVFEEM 297
Query: 137 RKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRM 196
K P+ TL ++ AC+H+G+ R VHC+ ++ + L+ +Y K G +
Sbjct: 298 LKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCL 357
Query: 197 EDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSH 256
E+A +F+ + + + +W M++G+A + A +F M PN VT+ ++LS+
Sbjct: 358 EEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSAC 417
Query: 257 KRCGLYDETLELFKLMRTR 275
GL +E LF M+ R
Sbjct: 418 AHGGLVEEGRRLFLSMKGR 436
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 302 bits (774), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 167/554 (30%), Positives = 282/554 (50%), Gaps = 75/554 (13%)
Query: 151 IIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRT 210
I++ C+ G+ + H + + + ++N L+ Y K G +E A Q+FDGM R+
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 211 ILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFK 270
++SWNTM+ Y N RME E L++F
Sbjct: 127 LVSWNTMIGLYTRN-----------RME------------------------SEALDIFL 151
Query: 271 LMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHK 330
MR G + S ++ V+S C + +++H +K + L+V AL+D Y K
Sbjct: 152 EMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCG 211
Query: 331 HLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISW 390
+ DA VF +++K+ ++W
Sbjct: 212 MIKDAVQVFESMQDKS----------------------------------------SVTW 231
Query: 391 SAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVR 450
S++++G+ EE+L L+RR Q ++ N T S+V+ C+ LAAL G+++H +
Sbjct: 232 SSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICK 291
Query: 451 NLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTT 510
+ N+ V + ++MY KCG ++ +++F ++ ++L WN++ISG+ H +
Sbjct: 292 SGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMIL 351
Query: 511 FDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLG 570
F++M + GM P+ VTF + LS C H GLV GR F M + + P V HY+C+VD+LG
Sbjct: 352 FEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILG 411
Query: 571 RAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFML 630
RAGLL EA ++++++P +P IWG+LL SCR +K+ ++ E A ++ L + G+ +L
Sbjct: 412 RAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVL 471
Query: 631 LSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVI 690
LSNIYAAN +WE+ A+ R + +KK G+SWI+++ KV+TFS G H + E+
Sbjct: 472 LSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICST 531
Query: 691 LEELALQMANENYE 704
L+ L ++ Y+
Sbjct: 532 LDNLVIKFRKFGYK 545
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 191/399 (47%), Gaps = 47/399 (11%)
Query: 50 LLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
+LQ C+ + +A+ H + I L LI Y++ G V A++VF+ + ER
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGM-LER 125
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRI 166
+ WN++I + A++I++ MR GF FT+ ++ AC + C+
Sbjct: 126 --SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK 183
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHD 226
+HC +++ +L+V L+ +Y K G ++DA Q+F+ M ++
Sbjct: 184 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKS---------------- 227
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
SVTW+S+++ + + Y+E L L++ + E + L+
Sbjct: 228 -------------------SVTWSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSS 268
Query: 287 VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKN 346
VI C+++ + +++H + K G+ +FV ++ +D Y K L +++ +F +++ KN
Sbjct: 269 VICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKN 328
Query: 347 LESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEES 406
LE WN +IS +A+ +E + ++++ DG + PN +++S+++S G EE
Sbjct: 329 LELWNTIISGFAKHARPKEVMILFEKMQQ--DG---MHPNEVTFSSLLSVCGHTGLVEEG 383
Query: 407 LELFRRMQLA-KVKPNCVTFSTVLSVCAELAALNLGREL 444
F+ M+ + PN V +S ++ + L+ EL
Sbjct: 384 RRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYEL 422
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 302 bits (773), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 193/642 (30%), Positives = 328/642 (51%), Gaps = 60/642 (9%)
Query: 48 ITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYA---RFGSVSHAQKVFN---- 100
I +L C T Q+H + I T + L +++ +A R A+ VF+
Sbjct: 16 IHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRRPYLADFARCVFHEYHV 75
Query: 101 -AVPFERLDHIPLWNSIIRANVSHGY-FEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHL 158
+ F ++ LWN++I+++ SHG A+ + M + G D F+L L+++ACS L
Sbjct: 76 CSFSFGEVEDPFLWNAVIKSH-SHGKDPRQALLLLCLMLENGVSVDKFSLSLVLKACSRL 134
Query: 159 GSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMV 218
G +H + G + L + N L+G+Y K G + + Q+FD MP R +S+N+M+
Sbjct: 135 GFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMI 194
Query: 219 SGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCE 278
GY V A +F M +E N ++W S++S + +
Sbjct: 195 DGYVKCGLIVSARELFDLMPME--MKNLISWNSMISGYAQ-------------------- 232
Query: 279 ISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNV 338
+++ + + + AD+ E D L N++ID Y KH + DA +
Sbjct: 233 -TSDGVDIASKLFADMPEKD-----------------LISWNSMIDGYVKHGRIEDAKGL 274
Query: 339 FFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFA 398
F + +++ +W +I YA+ G A K+L P R +V++++++++G+
Sbjct: 275 FDVMPRRDVVTWATMIDGYAKLGFVHHA--------KTLFDQMPHR-DVVAYNSMMAGYV 325
Query: 399 SKGCGEESLELFRRMQL-AKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNI 457
E+LE+F M+ + + P+ T VL A+L L+ ++H Y V
Sbjct: 326 QNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGG 385
Query: 458 LVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKA 517
+G LI+MY KCG + LVF+ IE + + WN++I G +HGLG++A ++ +
Sbjct: 386 KLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDMLLQIERL 445
Query: 518 GMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQE 577
+KPD +TFV L+ACSH+GLV G F M R+ +IEP ++HY C+VD+L R+G ++
Sbjct: 446 SLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRSGSIEL 505
Query: 578 ANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAA 637
A +++ MP+EPN+ IW L +C HK+ + E A ++ S++LLSN+YA+
Sbjct: 506 AKNLIEEMPVEPNDVIWRTFLTACSHHKEFETGELVAKHLILQAGYNPSSYVLLSNMYAS 565
Query: 638 NGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNI 679
G W+D RVR K++ ++K PG SWIE+ +V+ F +I
Sbjct: 566 FGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEFFVDSI 607
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 302 bits (773), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 203/672 (30%), Positives = 332/672 (49%), Gaps = 89/672 (13%)
Query: 47 FITLLQQCSTLQQAR---QLHSQTILTAAYRKP-FLAAKLIALYARFGSVSHAQKVFNAV 102
++ L C A+ ++H+ + ++ + ++ LIA+Y R G + A+++ +
Sbjct: 287 IVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQM 346
Query: 103 PFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSS 162
+ WNS+I+ V + ++ A+E + M G D ++ II A L +
Sbjct: 347 ---NNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLL 403
Query: 163 LCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYA 222
+H + ++ G+ ++L V N L+ MY K C L M
Sbjct: 404 AGMELHAYVIKHGWDSNLQVGNTLIDMYSK-------CNLTCYM---------------- 440
Query: 223 FNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAE 282
R F RM +D ++WT++++ + + + E LELF+ + + EI
Sbjct: 441 --------GRAFLRMHDKDL----ISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEM 488
Query: 283 ALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDI 342
L ++ + + + +EIH ++++ G D + ++N L+D Y K +++G A VF I
Sbjct: 489 ILGSILRASSVLKSMLIVKEIHCHILRKGLLDTV-IQNELVDVYGKCRNMGYATRVFESI 547
Query: 343 KNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGC 402
K K+ V+SW+++IS A G
Sbjct: 548 KGKD----------------------------------------VVSWTSMISSSALNGN 567
Query: 403 GEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRN--LMDDNILVG 460
E++ELFRRM + + V +LS A L+ALN GRE+H Y +R ++ +I V
Sbjct: 568 ESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVA 627
Query: 461 NGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMK 520
+++MY CGD + VFD IE + L+ + S+I+ YGMHG G A+ FD+M +
Sbjct: 628 --VVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVS 685
Query: 521 PDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAND 580
PDH++F+ L ACSHAGL+ GR M E+ +EP EHY CLVD+LGRA + EA +
Sbjct: 686 PDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFE 745
Query: 581 IVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGR 640
V+ M EP +W ALL +CR+H + +I E A ++L L + G+ +L+SN++A GR
Sbjct: 746 FVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGR 805
Query: 641 WEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMAN 700
W D +VR K G++K PG SWIE+ KV+ F+A + H E+Y L E+ ++
Sbjct: 806 WNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLER 865
Query: 701 E--NYELNSCFN 710
E EL FN
Sbjct: 866 EKGKRELAREFN 877
Score = 167 bits (422), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 139/533 (26%), Positives = 236/533 (44%), Gaps = 90/533 (16%)
Query: 47 FITLLQQCS---TLQQARQLHSQTILT-AAYRKPFLAAKLIALYARFGSVSHAQKVFNAV 102
F +L+ C + Q RQLHS+ T ++ FLA KL+ +Y + GS+ A+KVF+ +
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 142
Query: 103 PFERLDHIPL-WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFT-LPLIIEACSHLGS 160
P D WN++I A VS+G A+ +Y MR G P G + P +++AC+ L
Sbjct: 143 P----DRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGV-PLGLSSFPALLKACAKLRD 197
Query: 161 SSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR-TILSWNTMVS 219
+H ++LG+ + +VN LV MY K + A +LFDG + + WN+++S
Sbjct: 198 IRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILS 257
Query: 220 GYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEI 279
Y+ + + +F+ M + PNS T S L++
Sbjct: 258 SYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTA------------------------ 293
Query: 280 SAEALAVVISVCADVVEVDRSREIHGYVIKGG-YEDYLFVKNALIDTYRKHKHLGDAHNV 338
C +EIH V+K + L+V NALI Y + + A +
Sbjct: 294 -----------CDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERI 342
Query: 339 FFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFA 398
+ N ++ +WN+LI Y ++ + +EA
Sbjct: 343 LRQMNNADVVTWNSLIKGYVQNLMYKEA-------------------------------- 370
Query: 399 SKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNIL 458
LE F M A K + V+ +++++ L+ L G ELH Y +++ D N+
Sbjct: 371 --------LEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQ 422
Query: 459 VGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAG 518
VGN LI+MY KC F + +DLISW ++I+GY + AL F ++ K
Sbjct: 423 VGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKR 482
Query: 519 MKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGR 571
M+ D + + L A S + + + ++R+ ++ +++ LVD+ G+
Sbjct: 483 MEIDEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNE--LVDVYGK 533
Score = 155 bits (391), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 125/501 (24%), Positives = 207/501 (41%), Gaps = 104/501 (20%)
Query: 151 IIEACSHLGSSSLCRIVHCH------ALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFD 204
++E C + S R +H + EL F + KLV MYGK G ++DA ++FD
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-----LAGKLVFMYGKCGSLDDAEKVFD 140
Query: 205 GMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDE 264
MP RT +WNTM+ Y N + A
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASA---------------------------------- 166
Query: 265 TLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALID 324
L L+ MR G + + ++ CA + ++ E+H ++K GY F+ NAL+
Sbjct: 167 -LALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVS 225
Query: 325 TYRKHKHLGDAHNVFFDIKNK-NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPL 383
Y K+ L A +F + K + WN+++SSY+ SG KSL
Sbjct: 226 MYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSG-------------KSL------ 266
Query: 384 RPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRE 443
E+LELFR M + PN T + L+ C + LG+E
Sbjct: 267 ---------------------ETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKE 305
Query: 444 LHGYAVR-NLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHG 502
+H ++ + + V N LI MY +CG + + + D+++WNSLI GY +
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365
Query: 503 LGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHY 562
+ AL F +MI AG K D V+ + ++A + AG L +++ + ++
Sbjct: 366 MYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKH-GWDSNLQVG 424
Query: 563 ACLVDL---------LGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEET 613
L+D+ +GRA L D++ + I G N C ++ +
Sbjct: 425 NTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTV-----IAGYAQNDCHVEA-LELFRDV 478
Query: 614 ASQILTLNSQITGSFMLLSNI 634
A + + ++ I GS + S++
Sbjct: 479 AKKRMEIDEMILGSILRASSV 499
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 103/243 (42%), Gaps = 23/243 (9%)
Query: 408 ELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNL--MDDNILVGNGLIN 465
E F+R+ +++ F+ VL +C + A++ GR+LH + + + L G L+
Sbjct: 66 EAFQRLDVSENNSPVEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGK-LVF 124
Query: 466 MYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVT 525
MY KCG VFD + R +WN++I Y +G +AL + M G+ +
Sbjct: 125 MYGKCGSLDDAEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSS 184
Query: 526 FVTALSACSHAGLVAAGRNLFYQMVR------EFRIEPTVEHYACLVDLLGRAGL---LQ 576
F L AC+ + +G L +V+ F + V YA DL L Q
Sbjct: 185 FPALLKACAKLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQ 244
Query: 577 EANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYA 636
E D V +W ++L+S T + E + + + S+ ++S + A
Sbjct: 245 EKGDAV----------LWNSILSSYSTSGKSLETLELFRE-MHMTGPAPNSYTIVSALTA 293
Query: 637 ANG 639
+G
Sbjct: 294 CDG 296
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 300 bits (769), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 183/627 (29%), Positives = 309/627 (49%), Gaps = 88/627 (14%)
Query: 46 FFITLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFG-SVSHAQKVFNA 101
+ +LLQ C+ + Q H+ + + + L++LY + G + ++VF+
Sbjct: 63 LYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDG 122
Query: 102 VPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSS 161
+ D I W S++ V+ A+E++V M FG + FTL ++ACS LG
Sbjct: 123 RFVK--DAIS-WTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEV 179
Query: 162 SLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGY 221
L R H + GF + + + L +YG
Sbjct: 180 RLGRCFHGVVITHGFEWNHFISSTLAYLYG------------------------------ 209
Query: 222 AFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLM-RTRGCEIS 280
N + V A R+F M P+ + WT++LS+ + LY+E L LF M R +G
Sbjct: 210 -VNREPVDARRVFDEMP----EPDVICWTAVLSAFSKNDLYEEALGLFYAMHRGKGLVPD 264
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFF 340
V++ C ++ + + +EIHG +I G + V+++L+D Y K + +A VF
Sbjct: 265 GSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREARQVFN 324
Query: 341 DIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASK 400
+ K N +SWSA++ G+
Sbjct: 325 GMSKK----------------------------------------NSVSWSALLGGYCQN 344
Query: 401 GCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVG 460
G E+++E+FR M+ + + F TVL CA LAA+ LG+E+HG VR N++V
Sbjct: 345 GEHEKAIEIFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVE 400
Query: 461 NGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMK 520
+ LI++Y K G V+ + R++I+WN+++S +G G+ A++ F++M+K G+K
Sbjct: 401 SALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIK 460
Query: 521 PDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAND 580
PD+++F+ L+AC H G+V GRN F M + + I+P EHY+C++DLLGRAGL +EA +
Sbjct: 461 PDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAEN 520
Query: 581 IVRNMPIEPNEYIWGALLNSCRTHKD-TKIVEETASQILTLNSQITGSFMLLSNIYAANG 639
++ + +WG LL C + D +++ E A +++ L + S++LLSN+Y A G
Sbjct: 521 LLERAECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIG 580
Query: 640 RWEDSARVRISAKKKGLKKTPGQSWIE 666
R D+ +R ++G+ KT GQSWI+
Sbjct: 581 RHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 3/197 (1%)
Query: 405 ESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLI 464
E++ + +++ ++++L C ++ + G + H + V++ ++ + VGN L+
Sbjct: 44 EAIRILNSTHSSEIPATPKLYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLL 103
Query: 465 NMYMKCG-DFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDH 523
++Y K G ++ VFD +D ISW S++SGY AL F EM+ G+ +
Sbjct: 104 SLYFKLGPGMRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANE 163
Query: 524 VTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVR 583
T +A+ ACS G V GR F+ +V E + L L G +A +
Sbjct: 164 FTLSSAVKACSELGEVRLGR-CFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFD 222
Query: 584 NMPIEPNEYIWGALLNS 600
MP EP+ W A+L++
Sbjct: 223 EMP-EPDVICWTAVLSA 238
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 300 bits (767), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 180/603 (29%), Positives = 317/603 (52%), Gaps = 52/603 (8%)
Query: 112 LWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHA 171
++N ++++ F + ++ +R G +PD FTLP+++++ L VH +A
Sbjct: 13 MYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYA 72
Query: 172 LELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGAS 231
++ G +V N L+GMY LG++E ++FD MP R +
Sbjct: 73 VKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDV-------------------- 112
Query: 232 RIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLM-RTRGCEISAEALAVVISV 290
V+W L+SS+ G +++ + +FK M + + + +S
Sbjct: 113 ---------------VSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSA 157
Query: 291 CADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESW 350
C+ + ++ I+ +V+ +E + + NAL+D + K L A VF +++KN++ W
Sbjct: 158 CSALKNLEIGERIYRFVVTE-FEMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCW 216
Query: 351 NALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELF 410
+++ Y +G +EA + E+S P++ +V+ W+A+++G+ +E+LELF
Sbjct: 217 TSMVFGYVSTGRIDEARVLF---ERS-----PVK-DVVLWTAMMNGYVQFNRFDEALELF 267
Query: 411 RRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKC 470
R MQ A ++P+ ++L+ CA+ AL G+ +HGY N + + +VG L++MY KC
Sbjct: 268 RCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKC 327
Query: 471 GDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTAL 530
G + VF I+ RD SW SLI G M+G+ AL + EM G++ D +TFV L
Sbjct: 328 GCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVL 387
Query: 531 SACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPN 590
+AC+H G VA GR +F+ M ++P EH +CL+DLL RAGLL EA +++ M E +
Sbjct: 388 TACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESD 447
Query: 591 EY---IWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARV 647
E ++ +LL++ R + + KI E A ++ + + + LL+++YA+ RWED V
Sbjct: 448 ETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNV 507
Query: 648 RISAKKKGLKKTPGQSWIEVRKKVYTFSAGN--IVHLGLDEVYVILEELA-LQMANENYE 704
R K G++K PG S IE+ + F G+ + H +DE+ +L + L + E+ E
Sbjct: 508 RRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMDEINSMLHQTTNLMLDLEHKE 567
Query: 705 LNS 707
++S
Sbjct: 568 IDS 570
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/388 (25%), Positives = 183/388 (47%), Gaps = 15/388 (3%)
Query: 59 QARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIR 118
+ ++H + +++ L+ +YA G + KVF+ +P +R + WN +I
Sbjct: 64 EGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMP-QR--DVVSWNGLIS 120
Query: 119 ANVSHGYFEFAIEIYVGMRKFGFFP-DGFTLPLIIEACSHLGSSSLCRIVHCHALELGFR 177
+ V +G FE AI ++ M + D T+ + ACS L + + ++ + F
Sbjct: 121 SYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVT-EFE 179
Query: 178 NHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRM 237
+ + N LV M+ K G ++ A +FD M + + W +MV GY A +F+R
Sbjct: 180 MSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERS 239
Query: 238 ELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEV 297
++D V WT++++ + + +DE LELF+ M+T G L +++ CA +
Sbjct: 240 PVKD----VVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGAL 295
Query: 298 DRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSY 357
++ + IHGY+ + V AL+D Y K + A VF++IK ++ SW +LI
Sbjct: 296 EQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGL 355
Query: 358 AESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM-QLA 416
A +G+ A + ++E + +R + I++ AV++ G E ++F M +
Sbjct: 356 AMNGMSGRALDLYYEME-----NVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERH 410
Query: 417 KVKPNCVTFSTVLSVCAELAALNLGREL 444
V+P S ++ + L+ EL
Sbjct: 411 NVQPKSEHCSCLIDLLCRAGLLDEAEEL 438
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/387 (23%), Positives = 161/387 (41%), Gaps = 75/387 (19%)
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREI 303
P+ + + +L S + + L LF +R +G L VV+ + +V ++
Sbjct: 9 PSLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKV 68
Query: 304 HGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLC 363
HGY +K G E +V N+L+ Y + H VF ++ +++ SWN LISSY +G
Sbjct: 69 HGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRF 128
Query: 364 EEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM-QLAKVKPNC 422
E+A V F+RM Q + +K +
Sbjct: 129 EDAIGV----------------------------------------FKRMSQESNLKFDE 148
Query: 423 VTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDN 482
T + LS C+ L L +G ++ + V + ++ +GN L++M+ KCG K VFD+
Sbjct: 149 GTIVSTLSACSALKNLEIGERIYRFVVTEF-EMSVRIGNALVDMFCKCGCLDKARAVFDS 207
Query: 483 IEGRDLISWNSLISGYGMHGLGDNA------------------------LTTFDE----- 513
+ +++ W S++ GY G D A FDE
Sbjct: 208 MRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELF 267
Query: 514 --MIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGR 571
M AG++PD+ V+ L+ C+ G + G+ + + E R+ LVD+ +
Sbjct: 268 RCMQTAGIRPDNFVLVSLLTGCAQTGALEQGK-WIHGYINENRVTVDKVVGTALVDMYAK 326
Query: 572 AGLLQEANDIVRNMPIEPNEYIWGALL 598
G ++ A ++ + E + W +L+
Sbjct: 327 CGCIETALEVFYEIK-ERDTASWTSLI 352
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 299 bits (765), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 167/539 (30%), Positives = 275/539 (51%), Gaps = 76/539 (14%)
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
RIVH H L+ FR+ + + N L+ MY K G +E+A ++F+ MP R ++W T++SGY+ +
Sbjct: 80 RIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQH 139
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
A F +M + PN T +S++ + RGC
Sbjct: 140 DRPCDALLFFNQMLRFGYSPNEFTLSSVIKA--------------AAAERRGC------- 178
Query: 285 AVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN 344
C ++HG+ +K G++ + V +AL+D Y ++
Sbjct: 179 ------CG--------HQLHGFCVKCGFDSNVHVGSALLDLYTRY--------------- 209
Query: 345 KNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGE 404
GL ++A V LE N +SW+A+I+G A + E
Sbjct: 210 ----------------GLMDDAQLVFDALESR---------NDVSWNALIAGHARRSGTE 244
Query: 405 ESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLI 464
++LELF+ M +P+ +++++ C+ L G+ +H Y +++ GN L+
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLL 304
Query: 465 NMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHV 524
+MY K G +FD + RD++SWNSL++ Y HG G A+ F+EM + G++P+ +
Sbjct: 305 DMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEI 364
Query: 525 TFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRN 584
+F++ L+ACSH+GL+ G + +Y+++++ I P HY +VDLLGRAG L A +
Sbjct: 365 SFLSVLTACSHSGLLDEGWH-YYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEE 423
Query: 585 MPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDS 644
MPIEP IW ALLN+CR HK+T++ A + L+ G ++L NIYA+ GRW D+
Sbjct: 424 MPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDA 483
Query: 645 ARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
ARVR K+ G+KK P SW+E+ ++ F A + H +E+ EE+ ++ Y
Sbjct: 484 ARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKIKELGY 542
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 187/397 (47%), Gaps = 46/397 (11%)
Query: 46 FFITLLQQCSTLQ---QARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAV 102
F+ TLL++C+ + Q R +H+ + + + L+ +YA+ GS+ A+KVF +
Sbjct: 62 FYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKM 121
Query: 103 PFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSS 162
P + D + W ++I H A+ + M +FG+ P+ FTL +I+A +
Sbjct: 122 P--QRDFV-TWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGC 178
Query: 163 LCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYA 222
+H ++ GF +++HV + L+ +Y + G M+DA +FD + R +SWN +++G+A
Sbjct: 179 CGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHA 238
Query: 223 FNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAE 282
A +F+ M + +RP+ ++ SL +
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGA--------------------------- 271
Query: 283 ALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDI 342
C+ +++ + +H Y+IK G + F N L+D Y K + DA +F +
Sbjct: 272 --------CSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRL 323
Query: 343 KNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGC 402
+++ SWN+L+++YA+ G +EA ++ + +RPN IS+ +V++ + G
Sbjct: 324 AKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV-----GIRPNEISFLSVLTACSHSGL 378
Query: 403 GEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALN 439
+E + M+ + P + TV+ + LN
Sbjct: 379 LDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLN 415
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 136/307 (44%), Gaps = 44/307 (14%)
Query: 299 RSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYA 358
+ R +H ++++ + + + N L++ Y K L +A VF + ++ +W LIS Y+
Sbjct: 78 QGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYS 137
Query: 359 ESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKV 418
Q RP C ++L F +M
Sbjct: 138 ----------------------QHDRP----------------C--DALLFFNQMLRFGY 157
Query: 419 KPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHL 478
PN T S+V+ A G +LHG+ V+ D N+ VG+ L+++Y + G L
Sbjct: 158 SPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQL 217
Query: 479 VFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGL 538
VFD +E R+ +SWN+LI+G+ + AL F M++ G +P H ++ + ACS G
Sbjct: 218 VFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGF 277
Query: 539 VAAGRNLFYQMVREFRIEPTVEHYA-CLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGAL 597
+ G+ + M++ E V L+D+ ++G + +A I + + + W +L
Sbjct: 278 LEQGKWVHAYMIKSG--EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSL 334
Query: 598 LNSCRTH 604
L + H
Sbjct: 335 LTAYAQH 341
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 154/324 (47%), Gaps = 9/324 (2%)
Query: 62 QLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANV 121
QLH + + + L+ LY R+G + AQ VF+A+ E + + WN++I +
Sbjct: 182 QLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDAL--ESRNDVS-WNALIAGHA 238
Query: 122 SHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLH 181
E A+E++ GM + GF P F+ + ACS G + VH + ++ G +
Sbjct: 239 RRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAF 298
Query: 182 VVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELED 241
N L+ MY K G + DA ++FD + R ++SWN++++ YA + A F+ M
Sbjct: 299 AGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVG 358
Query: 242 WRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSR 301
RPN +++ S+L++ GL DE ++LM+ G A V+ + +++R+
Sbjct: 359 IRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRAL 418
Query: 302 EIHGYVIKGGYEDYLFVKNALIDTYRKHKH--LGD-AHNVFFDIKNKNLESWNALISSYA 358
++ + E + AL++ R HK+ LG A F++ + L + YA
Sbjct: 419 R---FIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYA 475
Query: 359 ESGLCEEAHAVLLQLEKSLDGHQP 382
G +A V ++++S +P
Sbjct: 476 SGGRWNDAARVRKKMKESGVKKEP 499
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 91/174 (52%), Gaps = 2/174 (1%)
Query: 425 FSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIE 484
++T+L C L GR +H + ++++ +I++GN L+NMY KCG ++ VF+ +
Sbjct: 63 YNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP 122
Query: 485 GRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRN 544
RD ++W +LISGY H +AL F++M++ G P+ T + + A + G
Sbjct: 123 QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQ 182
Query: 545 LFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALL 598
L + + + V + L+DL R GL+ +A +V + N+ W AL+
Sbjct: 183 L-HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQ-LVFDALESRNDVSWNALI 234
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 113/245 (46%), Gaps = 26/245 (10%)
Query: 47 FITLLQQCST---LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
+ +L CS+ L+Q + +H+ I + F L+ +YA+ GS+ A+K+F+ +
Sbjct: 265 YASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA 324
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
+ D + WNS++ A HG+ + A+ + MR+ G P+ + ++ ACSH G
Sbjct: 325 --KRDVVS-WNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLD- 380
Query: 164 CRIVHCHALELGFRNHL-----HVVNKLVGMYGKLGRMEDACQLFDGMPVR-TILSWNTM 217
H EL ++ + H V +V + G+ G + A + + MP+ T W +
Sbjct: 381 ---EGWHYYELMKKDGIVPEAWHYVT-VVDLLGRAGDLNRALRFIEEMPIEPTAAIWKAL 436
Query: 218 VSGYAFNHD----CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMR 273
++ + + A +F+ ++ +D P+ + + S G +++ + K M+
Sbjct: 437 LNACRMHKNTELGAYAAEHVFE-LDPDDPGPHVILYNIYASG----GRWNDAARVRKKMK 491
Query: 274 TRGCE 278
G +
Sbjct: 492 ESGVK 496
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 299 bits (765), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 207/668 (30%), Positives = 314/668 (47%), Gaps = 104/668 (15%)
Query: 59 QARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIR 118
Q Q+ + + R ++ L+ LY + G V+ AQ +F+ +P ER D + +WN++I
Sbjct: 68 QVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMP-ER-DTV-VWNALIC 124
Query: 119 ANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRN 178
+GY A ++++ M + GF P TL ++ C G S R VH A + G
Sbjct: 125 GYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLEL 184
Query: 179 HLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRME 238
V N L+ Y K + A LF M ++ +SWNTM+ Y+ + A +FK M
Sbjct: 185 DSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMF 244
Query: 239 LEDWRPNSVTWTSLLSSH-----------------------------KRCG-------LY 262
++ + VT +LLS+H RCG LY
Sbjct: 245 EKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLY 304
Query: 263 ------------------------DETLELFKLMRTRGCEISAEALAVVISVCADVVEVD 298
D + F R +I A AL ++ C +D
Sbjct: 305 ASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHID 364
Query: 299 RSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYA 358
+HGY IK G V N LI Y K D V F
Sbjct: 365 IGMSLHGYAIKSGLCTKTLVVNGLITMYSK---FDDVETVLF------------------ 403
Query: 359 ESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQL-AK 417
+ QL+++ PL ISW++VISG G + E+F +M L
Sbjct: 404 ----------LFEQLQET-----PL----ISWNSVISGCVQSGRASTAFEVFHQMMLTGG 444
Query: 418 VKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGH 477
+ P+ +T +++L+ C++L LNLG+ELHGY +RN ++ V LI+MY KCG+ +
Sbjct: 445 LLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAE 504
Query: 478 LVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAG 537
VF +I+ +WNS+ISGY + GL AL+ + EM + G+KPD +TF+ LSAC+H G
Sbjct: 505 SVFKSIKAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSACNHGG 564
Query: 538 LVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGAL 597
V G+ F M++EF I PT++HYA +V LLGRA L EA ++ M I+P+ +WGAL
Sbjct: 565 FVDEGKICFRAMIKEFGISPTLQHYALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGAL 624
Query: 598 LNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLK 657
L++C H++ ++ E A ++ L+ + G ++L+SN+YA W+D RVR K G
Sbjct: 625 LSACIIHRELEVGEYVARKMFMLDYKNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNGYD 684
Query: 658 KTPGQSWI 665
G S I
Sbjct: 685 GYLGVSQI 692
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 134/558 (24%), Positives = 243/558 (43%), Gaps = 101/558 (18%)
Query: 103 PFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSS 162
P + ++S++++ + I I+ + + P+ FT+ + ++A + +S
Sbjct: 6 PITLYRDLSYFHSLLKSCIHGEISSSPITIFRDLLRSSLTPNHFTMSIFLQATTTSFNSF 65
Query: 163 LCRI--VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSG 220
++ V H + G ++V L+ +Y K G + A LFD MP R + WN ++ G
Sbjct: 66 KLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICG 125
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEIS 280
Y+ N A ++F M + + P++ T +LL +CG
Sbjct: 126 YSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGF------------------- 166
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFF 340
V + R +HG K G E VKNALI Y K LG A +F
Sbjct: 167 ----------------VSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFR 210
Query: 341 DIKNKNLESWNALISSYAESGLCEEAHAVLLQL-EKSLD--------------GHQPL-- 383
++K+K+ SWN +I +Y++SGL EEA V + EK+++ H+PL
Sbjct: 211 EMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVSHEPLHC 270
Query: 384 --------------------------------------RPNVISWSAVISGFASKGCGEE 405
+ +++ ++++S +A KG +
Sbjct: 271 LVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDI 330
Query: 406 SLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLIN 465
++ F + + +K + V +L C + + +++G LHGYA+++ + LV NGLI
Sbjct: 331 AVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLIT 390
Query: 466 MYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDE-MIKAGMKPDHV 524
MY K D + +F+ ++ LISWNS+ISG G A F + M+ G+ PD +
Sbjct: 391 MYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAI 450
Query: 525 TFVTALSACSHAGLVAAGRNLF-YQMVREFRIEPTVEHYAC--LVDLLGRAGLLQEANDI 581
T + L+ CS + G+ L Y + F E++ C L+D+ + G +A +
Sbjct: 451 TIASLLAGCSQLCCLNLGKELHGYTLRNNFE----NENFVCTALIDMYAKCGNEVQAESV 506
Query: 582 VRNMPIEPNEYIWGALLN 599
+++ P W ++++
Sbjct: 507 FKSIK-APCTATWNSMIS 523
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 155/366 (42%), Gaps = 42/366 (11%)
Query: 48 ITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERL 107
+T++ S LH + + L+ Y+R G + A++++ + +
Sbjct: 253 VTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASA---KQ 309
Query: 108 DHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIV 167
D I SI+ G + A+ + R+ D L I+ C + +
Sbjct: 310 DSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSL 369
Query: 168 HCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDC 227
H +A++ G VVN L+ MY K +E LF+ + ++SWN+++SG C
Sbjct: 370 HGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISG------C 423
Query: 228 VGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVV 287
V + R E+ ++M T G A +A +
Sbjct: 424 VQSGRASTAFEV----------------------------FHQMMLTGGLLPDAITIASL 455
Query: 288 ISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNL 347
++ C+ + ++ +E+HGY ++ +E+ FV ALID Y K + A +VF IK
Sbjct: 456 LAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCT 515
Query: 348 ESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESL 407
+WN++IS Y+ SGL A + L++ + + L+P+ I++ V+S G +E
Sbjct: 516 ATWNSMISGYSLSGLQHRALSCYLEMRE-----KGLKPDEITFLGVLSACNHGGFVDEGK 570
Query: 408 ELFRRM 413
FR M
Sbjct: 571 ICFRAM 576
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 298 bits (764), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 194/622 (31%), Positives = 315/622 (50%), Gaps = 69/622 (11%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIY--VGMRKF 139
LI + G ++ A+K+F+ +P ER + W +I + G A E++ V RK
Sbjct: 52 LIGELCKVGKIAEARKLFDGLP-ER--DVVTWTHVITGYIKLGDMREARELFDRVDSRK- 107
Query: 140 GFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDA 199
+ T ++ +L S L I E+ RN + N ++ Y + GR++ A
Sbjct: 108 ----NVVTWTAMVSG--YLRSKQLS-IAEMLFQEMPERNVVSW-NTMIDGYAQSGRIDKA 159
Query: 200 CQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRC 259
+LFD MP R I+SWN+MV A +F+RM R + V+WT+++ +
Sbjct: 160 LELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMP----RRDVVSWTAMVDGLAKN 215
Query: 260 GLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVK 319
G DE LF M R +IS
Sbjct: 216 GKVDEARRLFDCMPERN----------IISW----------------------------- 236
Query: 320 NALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDG 379
NA+I Y ++ + +A +F + ++ SWN +I+ + + +A + ++ +
Sbjct: 237 NAMITGYAQNNRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEK--- 293
Query: 380 HQPLRPNVISWSAVISGFASKGCGEESLELFRRM-QLAKVKPNCVTFSTVLSVCAELAAL 438
NVISW+ +I+G+ EE+L +F +M + VKPN T+ ++LS C++LA L
Sbjct: 294 ------NVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGL 347
Query: 439 NLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDN--IEGRDLISWNSLIS 496
G+++H +++ N +V + L+NMY K G+ +FDN + RDLISWNS+I+
Sbjct: 348 VEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIA 407
Query: 497 GYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIE 556
Y HG G A+ +++M K G KP VT++ L ACSHAGLV G F +VR+ +
Sbjct: 408 VYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLP 467
Query: 557 PTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQ 616
EHY CLVDL GRAG L++ + + + +GA+L++C H + I +E +
Sbjct: 468 LREEHYTCLVDLCGRAGRLKDVTNFINCDDARLSRSFYGAILSACNVHNEVSIAKEVVKK 527
Query: 617 ILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSA 676
+L S G+++L+SNIYAANG+ E++A +R+ K+KGLKK PG SW++V K+ + F
Sbjct: 528 VLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVV 587
Query: 677 GNIVHLGLDEVYVILEELALQM 698
G+ H + + IL +L +M
Sbjct: 588 GDKSHPQFEALDSILSDLRNKM 609
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 108/238 (45%), Gaps = 13/238 (5%)
Query: 47 FITLLQQCSTLQ---QARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
++++L CS L + +Q+H + + + + L+ +Y++ G + A+K+F+
Sbjct: 334 YVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGL 393
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHL----- 158
+ D I WNS+I HG+ + AIE+Y MRK GF P T ++ ACSH
Sbjct: 394 VCQRDLIS-WNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEK 452
Query: 159 GSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMV 218
G +V +L L ++ LV + G+ GR++D + R S+ +
Sbjct: 453 GMEFFKDLVRDESLPLREEHYTC----LVDLCGRAGRLKDVTNFINCDDARLSRSFYGAI 508
Query: 219 SGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRG 276
H+ V ++ + LE ++ T+ + + + G +E E+ M+ +G
Sbjct: 509 LSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKG 566
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 178/640 (27%), Positives = 301/640 (47%), Gaps = 78/640 (12%)
Query: 53 QCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPL 112
Q S + LH+ + T+ ++ + L+ +Y R G + + +VF+ +PF +
Sbjct: 120 QSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFR---NAVT 176
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL 172
W +II V G ++ + + M + D +T + ++AC+ L + +H H +
Sbjct: 177 WTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVI 236
Query: 173 ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASR 232
GF L V N L MY + G M+D LF+ M R +
Sbjct: 237 VRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDV--------------------- 275
Query: 233 IFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCA 292
V+WTSL+ ++KR G + +E F MR + + A + S CA
Sbjct: 276 --------------VSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACA 321
Query: 293 DVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNA 352
+ + ++H V+ G D L V N+++ Y +L A
Sbjct: 322 SLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSA----------------- 364
Query: 353 LISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRR 412
+VL Q + D +ISWS +I G+ G GEE + F
Sbjct: 365 ---------------SVLFQGMRCRD--------IISWSTIIGGYCQAGFGEEGFKYFSW 401
Query: 413 MQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGD 472
M+ + KP +++LSV +A + GR++H A+ ++ N V + LINMY KCG
Sbjct: 402 MRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGS 461
Query: 473 FKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSA 532
K+ ++F + D++S ++I+GY HG A+ F++ +K G +PD VTF++ L+A
Sbjct: 462 IKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTA 521
Query: 533 CSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEY 592
C+H+G + G + F M + + P EHY C+VDLL RAG L +A ++ M + ++
Sbjct: 522 CTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDV 581
Query: 593 IWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAK 652
+W LL +C+ D + A +IL L+ + + L+NIY++ G E++A VR + K
Sbjct: 582 VWTTLLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMK 641
Query: 653 KKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILE 692
KG+ K PG S I+++ V F +G+ H +++Y ILE
Sbjct: 642 AKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 117/495 (23%), Positives = 221/495 (44%), Gaps = 83/495 (16%)
Query: 90 GSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMR--KFGFFPDGFT 147
G++ A++VF+ +P I W SII+ V+ + A+ ++ MR PD
Sbjct: 54 GNLRAARQVFDKMPH---GDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSV 110
Query: 148 LPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMP 207
L ++++AC + + +H +A++ + ++V + L+ MY ++G+++ +C++F MP
Sbjct: 111 LSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP 170
Query: 208 VRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLE 267
R ++W +++G G Y E L
Sbjct: 171 FRNAVTWTAIITGLV-----------------------------------HAGRYKEGLT 195
Query: 268 LFKLMRTRGCEIS-AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTY 326
F M +R E+S A+ + CA + +V + IH +VI G+ L V N+L Y
Sbjct: 196 YFSEM-SRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMY 254
Query: 327 RKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPN 386
+ + D +F ++ +++ SW +LI +Y G +E AV
Sbjct: 255 TECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIG--QEVKAV----------------- 295
Query: 387 VISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHG 446
E F +M+ ++V PN TF+++ S CA L+ L G +LH
Sbjct: 296 ---------------------ETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHC 334
Query: 447 YAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDN 506
+ ++D++ V N ++ MY CG+ ++F + RD+ISW+++I GY G G+
Sbjct: 335 NVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEE 394
Query: 507 ALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLV 566
F M ++G KP + LS + ++ GR + + + F +E + L+
Sbjct: 395 GFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQV-HALALCFGLEQNSTVRSSLI 453
Query: 567 DLLGRAGLLQEANDI 581
++ + G ++EA+ I
Sbjct: 454 NMYSKCGSIKEASMI 468
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 126/543 (23%), Positives = 210/543 (38%), Gaps = 118/543 (21%)
Query: 47 FITLLQQCSTLQQ---ARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F L+ C+ L+Q + +H+ I+ +A L +Y G + +F +
Sbjct: 212 FAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMS 271
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
ER + W S+I A G A+E ++ MR P+ T + AC+ L
Sbjct: 272 -ER--DVVSWTSLIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVW 328
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
+HC+ L LG + L V N ++ MY G + A LF GM R I+SW+T++ GY
Sbjct: 329 GEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYC- 387
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
+ G +E + F MR G + + A
Sbjct: 388 ----------------------------------QAGFGEEGFKYFSWMRQSGTKPTDFA 413
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
LA ++SV ++ ++ R++H + G E V+++LI+ Y K + +A +F +
Sbjct: 414 LASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETD 473
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
++ S A+I+ YAE G +EA
Sbjct: 474 RDDIVSLTAMINGYAEHGKSKEA------------------------------------- 496
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
++LF + +P+ VTF +VL+ C L+LG H + N+M +
Sbjct: 497 ---IDLFEKSLKVGFRPDSVTFISVLTACTHSGQLDLG--FHYF---NMMQE-------- 540
Query: 464 INMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDH 523
M+ G +V DL+ +S +A +EM K D
Sbjct: 541 -TYNMRPAKEHYGCMV-------DLLCRAGRLS---------DAEKMINEM---SWKKDD 580
Query: 524 VTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPT-VEHYACLVDLLGRAGLLQEANDIV 582
V + T L AC G + GR R ++PT L ++ G L+EA ++
Sbjct: 581 VVWTTLLIACKAKGDIERGRR---AAERILELDPTCATALVTLANIYSSTGNLEEAANVR 637
Query: 583 RNM 585
+NM
Sbjct: 638 KNM 640
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 126/256 (49%), Gaps = 10/256 (3%)
Query: 386 NVISWSAVISGFASKGCGEESLELFRRMQLAK--VKPNCVTFSTVLSVCAELAALNLGRE 443
+++SW+++I + + +E+L LF M++ V P+ S VL C + + + G
Sbjct: 70 DIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGES 129
Query: 444 LHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGL 503
LH YAV+ + ++ VG+ L++MY + G K VF + R+ ++W ++I+G G
Sbjct: 130 LHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGR 189
Query: 504 GDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLF-YQMVREFRIEPTVEHY 562
LT F EM ++ D TF AL AC+ V G+ + + +VR F V +
Sbjct: 190 YKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVAN- 248
Query: 563 ACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSC-RTHKDTKIVEETASQILTLN 621
L + G +Q+ + NM E + W +L+ + R ++ K VE + I N
Sbjct: 249 -SLATMYTECGEMQDGLCLFENMS-ERDVVSWTSLIVAYKRIGQEVKAVE---TFIKMRN 303
Query: 622 SQITGSFMLLSNIYAA 637
SQ+ + +++++A
Sbjct: 304 SQVPPNEQTFASMFSA 319
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 60/141 (42%), Gaps = 4/141 (2%)
Query: 461 NGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEM--IKAG 518
N + + G+ + VFD + D++SW S+I Y D AL F M +
Sbjct: 44 NSHLRSLINAGNLRAARQVFDKMPHGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHA 103
Query: 519 MKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEA 578
+ PD L AC + +A G +L V+ + +V + L+D+ R G + ++
Sbjct: 104 VSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKT-SLLSSVYVGSSLLDMYKRVGKIDKS 162
Query: 579 NDIVRNMPIEPNEYIWGALLN 599
+ MP N W A++
Sbjct: 163 CRVFSEMPFR-NAVTWTAIIT 182
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 298 bits (762), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 185/613 (30%), Positives = 303/613 (49%), Gaps = 58/613 (9%)
Query: 92 VSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLI 151
+ A++VFN VP H+ L+ +I A+ ++ M D + +
Sbjct: 51 IDEAREVFNQVPSP---HVSLYTKMITGYTRSNRLVDALNLFDEMP----VRDVVSWNSM 103
Query: 152 IEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTI 211
I C G + + E + +VN G + + G+++ A +LF MPV+
Sbjct: 104 ISGCVECGDMNTAVKLFDEMPERSVVSWTAMVN---GCF-RSGKVDQAERLFYQMPVKDT 159
Query: 212 LSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKL 271
+WN+MV GY A ++FK+M + N ++WT+++ + E L+LFK
Sbjct: 160 AAWNSMVHGYLQFGKVDDALKLFKQMPGK----NVISWTTMICGLDQNERSGEALDLFKN 215
Query: 272 MRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKH 331
M + ++ VI+ CA+ ++HG +IK G+ +V +LI Y K
Sbjct: 216 MLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKR 275
Query: 332 LGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWS 391
+GD+ VF + + V W+
Sbjct: 276 IGDSRKVF----------------------------------------DEKVHEQVAVWT 295
Query: 392 AVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRN 451
A++SG++ E++L +F M + PN TF++ L+ C+ L L+ G+E+HG AV+
Sbjct: 296 ALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKL 355
Query: 452 LMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTF 511
++ + VGN L+ MY G+ VF I + ++SWNS+I G HG G A F
Sbjct: 356 GLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIF 415
Query: 512 DEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFR-IEPTVEHYACLVDLLG 570
+MI+ +PD +TF LSACSH G + GR LFY M I+ ++HY C+VD+LG
Sbjct: 416 GQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILG 475
Query: 571 RAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFML 630
R G L+EA +++ M ++PNE +W ALL++CR H D E+ A+ I L+S+ + +++L
Sbjct: 476 RCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVL 535
Query: 631 LSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVI 690
LSNIYA+ GRW + +++R+ KK G+ K PG SW+ +R K + F +G+ H +Y
Sbjct: 536 LSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQPH--CSRIYEK 593
Query: 691 LEELALQMANENY 703
LE L ++ Y
Sbjct: 594 LEFLREKLKELGY 606
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/450 (22%), Positives = 180/450 (40%), Gaps = 89/450 (19%)
Query: 57 LQQARQLHSQTIL--TAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWN 114
+ QA +L Q + TAA+ ++ Y +FG V A K+F +P + ++ W
Sbjct: 144 VDQAERLFYQMPVKDTAAWNS------MVHGYLQFGKVDDALKLFKQMPGK---NVISWT 194
Query: 115 SIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALEL 174
++I + A++++ M + +I AC++ + + VH ++L
Sbjct: 195 TMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKL 254
Query: 175 GFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIF 234
GF +V L+ Y R+ D+ ++FD + W ++SGY+ N A IF
Sbjct: 255 GFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIF 314
Query: 235 KRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADV 294
M PN T+ S L+S C+ +
Sbjct: 315 SGMLRNSILPNQSTFASGLNS-----------------------------------CSAL 339
Query: 295 VEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALI 354
+D +E+HG +K G E FV N+L+ Y ++ DA +VF I K++ SWN++I
Sbjct: 340 GTLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSII 399
Query: 355 SSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQ 414
G A G G+ + +F +M
Sbjct: 400 ----------------------------------------VGCAQHGRGKWAFVIFGQMI 419
Query: 415 LAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVR--NLMDDNILVGNGLINMYMKCGD 472
+P+ +TF+ +LS C+ L GR+L Y N +D I ++++ +CG
Sbjct: 420 RLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGK 479
Query: 473 FKKGHLVFDNIEGR-DLISWNSLISGYGMH 501
K+ + + + + + + W +L+S MH
Sbjct: 480 LKEAEELIERMVVKPNEMVWLALLSACRMH 509
Score = 92.8 bits (229), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 153/343 (44%), Gaps = 17/343 (4%)
Query: 48 ITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERL 107
IT Q+H I + +++A LI YA + ++KVF+ E+
Sbjct: 232 ITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQ- 290
Query: 108 DHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIV 167
+ +W +++ + E A+ I+ GM + P+ T + +CS LG+ + +
Sbjct: 291 --VAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEM 348
Query: 168 HCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDC 227
H A++LG V N LV MY G + DA +F + ++I+SWN+++ G A +
Sbjct: 349 HGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRG 408
Query: 228 VGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAE----- 282
A IF +M + P+ +T+T LLS+ CG ++ +LF M + I +
Sbjct: 409 KWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYT 468
Query: 283 ALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLG---DAHNVF 339
+ ++ C + E + I V+K +L AL+ R H + A
Sbjct: 469 CMVDILGRCGKLKEAEEL--IERMVVKPNEMVWL----ALLSACRMHSDVDRGEKAAAAI 522
Query: 340 FDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQP 382
F++ +K+ ++ L + YA +G + ++++K+ +P
Sbjct: 523 FNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKP 565
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 296 bits (757), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 180/567 (31%), Positives = 299/567 (52%), Gaps = 20/567 (3%)
Query: 86 YARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDG 145
Y R + A K+F+ +P ER + ++I+ + + A+E++ MR G +
Sbjct: 117 YVRSRRLWDALKLFDVMP-ER--SCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNE 173
Query: 146 FTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDG 205
TL +I ACSHLG CR++ A++L + V L+ MY ++DA +LFD
Sbjct: 174 VTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDE 233
Query: 206 MPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDET 265
MP R +++WN M++GY+ A +F ++ +D V+W +++ R DE
Sbjct: 234 MPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKD----IVSWGTMIDGCLRKNQLDEA 289
Query: 266 LELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDT 325
L + M G + S + ++S A V + ++HG ++K G++ Y F++ +I
Sbjct: 290 LVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHF 349
Query: 326 YRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRP 385
Y + A F ++ S NALI+ + ++G+ E+A V Q
Sbjct: 350 YAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHD---------K 400
Query: 386 NVISWSAVISGFASKGCGEESLELFRRM-QLAKVKPNCVTFSTVLSVCAELAALNLGREL 444
++ SW+A+ISG+A + +L LFR M ++VKP+ +T +V S + L +L G+
Sbjct: 401 DIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRA 460
Query: 445 HGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVF---DNIEGRDLISWNSLISGYGMH 501
H Y + + N + +I+MY KCG + +F NI + WN++I G H
Sbjct: 461 HDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATH 520
Query: 502 GLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEH 561
G AL + ++ +KP+ +TFV LSAC HAGLV G+ F M + IEP ++H
Sbjct: 521 GHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKH 580
Query: 562 YACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLN 621
Y C+VDLLG+AG L+EA ++++ MP++ + IWG LL++ RTH + +I E A+++ ++
Sbjct: 581 YGCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAID 640
Query: 622 SQITGSFMLLSNIYAANGRWEDSARVR 648
G ++LSN+YA GRWED A VR
Sbjct: 641 PSHGGCKVMLSNVYADAGRWEDVALVR 667
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 134/507 (26%), Positives = 231/507 (45%), Gaps = 60/507 (11%)
Query: 154 ACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILS 213
+C+ + R +HC L+ G ++ ++ N ++ MY K + DA +F S
Sbjct: 50 SCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSAS 109
Query: 214 WNTMVSGYAFNHDCVGASRIFKRMELEDWRP--NSVTWTSLLSSHKRCGLYDETLELFKL 271
+N MV GY V + R++ ++L D P + V++T+L+ + + + E +ELF+
Sbjct: 110 FNIMVDGY------VRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 272 MRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKH 331
MR G ++ LA VIS C+ + + R + IK E +FV L+ Y
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLC 223
Query: 332 LGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWS 391
L DA +F ++ +NL +WN +++ Y+++GL E+A + Q+ + +++SW
Sbjct: 224 LKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITE---------KDIVSWG 274
Query: 392 AVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHG----- 446
+I G K +E+L + M +KP+ V +LS A + G +LHG
Sbjct: 275 TMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKR 334
Query: 447 ---------------YAVRN-----------LMDDNILVGNGLINMYMKCGDFKKGHLVF 480
YAV N + D+I N LI ++K G ++ VF
Sbjct: 335 GFDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVF 394
Query: 481 DNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAG-MKPDHVTFVTALSACSHAGLV 539
D +D+ SWN++ISGY AL F EMI + +KPD +T V+ SA S G +
Sbjct: 395 DQTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSL 454
Query: 540 AAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI------VRNMPIEPNEYI 593
G+ + + I P A ++D+ + G ++ A +I + + I P
Sbjct: 455 EEGKRA-HDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISP---- 509
Query: 594 WGALLNSCRTHKDTKIVEETASQILTL 620
W A++ TH K+ + S + +L
Sbjct: 510 WNAIICGSATHGHAKLALDLYSDLQSL 536
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 180/391 (46%), Gaps = 51/391 (13%)
Query: 280 SAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVF 339
+ AL + CA +V R+IH V+K G + ++ N++++ Y K + L DA +VF
Sbjct: 40 TERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVF 99
Query: 340 FDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFAS 399
D + S+N ++ Y S +A L+L + P R + +S++ +I G+A
Sbjct: 100 RDHAKLDSASFNIMVDGYVRSRRLWDA----LKLFDVM----PER-SCVSYTTLIKGYAQ 150
Query: 400 KGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILV 459
E++ELFR M+ + N VT +TV+S C+ L + R L A++ ++ + V
Sbjct: 151 NNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFV 210
Query: 460 GNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLG--------------- 504
L++MY C K +FD + R+L++WN +++GY GL
Sbjct: 211 STNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDI 270
Query: 505 ----------------DNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQ 548
D AL + EM++ GMKP V V LSA + + + G L
Sbjct: 271 VSWGTMIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGT 330
Query: 549 MVR------EFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCR 602
+V+ +F ++ T+ H+ + + + A LQ+ V++ N I G + N
Sbjct: 331 IVKRGFDCYDF-LQATIIHFYAVSNDIKLA--LQQFEASVKDHIASRNALIAGFVKNG-M 386
Query: 603 THKDTKIVEETASQ-ILTLNSQITGSFMLLS 632
+ ++ ++T + I + N+ I+G LS
Sbjct: 387 VEQAREVFDQTHDKDIFSWNAMISGYAQSLS 417
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 83/171 (48%), Gaps = 10/171 (5%)
Query: 56 TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNS 115
+L++ ++ H + L A +I +YA+ GS+ A +F+ I WN+
Sbjct: 453 SLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNA 512
Query: 116 IIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSH-----LGSSSLCRIVHCH 170
II + +HG+ + A+++Y ++ P+ T ++ AC H LG + + H
Sbjct: 513 IICGSATHGHAKLALDLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDH 572
Query: 171 ALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRT-ILSWNTMVSG 220
+E +++ +V + GK GR+E+A ++ MPV+ ++ W ++S
Sbjct: 573 GIEPDIKHY----GCMVDLLGKAGRLEEAKEMIKKMPVKADVMIWGMLLSA 619
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 295 bits (755), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 204/723 (28%), Positives = 338/723 (46%), Gaps = 120/723 (16%)
Query: 47 FITLLQQCSTLQQ---ARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F +LL+ C++LQ+ +H Q ++ ++++ L+ LYA+FG ++HA+KVF +
Sbjct: 49 FPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMR 108
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
+ H W ++I G A + MR G P TL +E S + +
Sbjct: 109 ERDVVH---WTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTL---LEMLSGVLEITQ 162
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
+ +H A+ GF + V+N ++ +Y K + DA LFD M R ++SWNTM+SGYA
Sbjct: 163 LQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYAS 222
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTW---------------------------------- 249
+ ++ RM + RP+ T+
Sbjct: 223 VGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHL 282
Query: 250 -TSLLSSHKRCGLYDETLELFK----------------LMR---------------TRGC 277
T+L++ + +CG + + + + LMR G
Sbjct: 283 KTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGS 342
Query: 278 EISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHN 337
++S+EA+A V++ CA + D +HGYV++ GY N+LI Y K HL +
Sbjct: 343 DLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLV 402
Query: 338 VFFDIKNKNLESWNALISSYAES-GLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISG 396
+F + ++L SWNA+IS YA++ LC
Sbjct: 403 IFERMNERDLVSWNAIISGYAQNVDLC--------------------------------- 429
Query: 397 FASKGCGEESLELFRRMQLAKVKP-NCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDD 455
++L LF M+ V+ + T ++L C+ AL +G+ +H +R+ +
Sbjct: 430 --------KALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRP 481
Query: 456 NILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMI 515
LV L++MY KCG + FD+I +D++SW LI+GYG HG GD AL + E +
Sbjct: 482 CSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIYSEFL 541
Query: 516 KAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLL 575
+GM+P+HV F+ LS+CSH G+V G +F MVR+F +EP EH AC+VDLL RA +
Sbjct: 542 HSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCRAKRI 601
Query: 576 QEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIY 635
++A + P+ + G +L++CR + T++ + ++ L G ++ L + +
Sbjct: 602 EDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDMIELKPGDAGHYVKLGHSF 661
Query: 636 AANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELA 695
AA RW+D + + GLKK PG S IE+ K TF + H D+ +L+ L+
Sbjct: 662 AAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH--SDDTVSLLKLLS 719
Query: 696 LQM 698
+M
Sbjct: 720 REM 722
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 145/579 (25%), Positives = 246/579 (42%), Gaps = 112/579 (19%)
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRI 166
L+ +NS I SHG + + + M PD FT P +++AC+ L S
Sbjct: 8 LNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLS 67
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHD 226
+H L GF + ++ + LV +Y K G + A ++F+ M R ++ W M+ Y+
Sbjct: 68 IHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYS---- 123
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
R G+ E L MR +G + L
Sbjct: 124 -------------------------------RAGIVGEACSLVNEMRFQGIKPGPVTLLE 152
Query: 287 VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKN 346
++S V+E+ + + +H + + G++ + V N++++ Y K H+GDA ++F ++ ++
Sbjct: 153 MLS---GVLEITQLQCLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRD 209
Query: 347 LESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVIS----------- 395
+ SWN +IS YA G E +L ++ DG LRP+ ++ A +S
Sbjct: 210 MVSWNTMISGYASVGNMSEILKLLYRMRG--DG---LRPDQQTFGASLSVSGTMCDLEMG 264
Query: 396 ----------GFASK------------GCGEE------------------SLELFRRMQL 415
GF CG+E ++ + M+L
Sbjct: 265 RMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRL 324
Query: 416 AKVKPNCVTFS---------------TVLSVCAELAALNLGRELHGYAVRNLMDDNILVG 460
+ + + FS +V++ CA+L + +LG +HGY +R+ +
Sbjct: 325 GRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPAL 384
Query: 461 NGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEM-IKAGM 519
N LI MY KCG K ++F+ + RDL+SWN++ISGY + AL F+EM K
Sbjct: 385 NSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQ 444
Query: 520 KPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAN 579
+ D T V+ L ACS AG + G+ + ++R F I P LVD+ + G L+ A
Sbjct: 445 QVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAAQ 503
Query: 580 DIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQIL 618
++ + + WG L+ H I E S+ L
Sbjct: 504 RCFDSISWK-DVVSWGILIAGYGFHGKGDIALEIYSEFL 541
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 295 bits (754), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 170/503 (33%), Positives = 281/503 (55%), Gaps = 22/503 (4%)
Query: 209 RTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLEL 268
R+ LS N + YA + + V A ++F + L + ++V WT+LLSS R GL +++L
Sbjct: 42 RSYLS-NALFQFYASSGEMVTAQKLFDEIPLSE--KDNVDWTTLLSSFSRYGLLVNSMKL 98
Query: 269 FKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRK 328
F MR + EI ++ + VCA + ++ +++ HG +K G + V NAL+D Y K
Sbjct: 99 FVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNALMDMYGK 158
Query: 329 HKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVI 388
+ + +F +++ K++ SW ++ + + E V H+ N +
Sbjct: 159 CGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVF---------HEMPERNAV 209
Query: 389 SWSAVISGFASKGCGEESLELFRRMQL-AKVKPNCVTFSTVLSVCAELAALNLGRELHGY 447
+W+ +++G+ G E LEL M N VT ++LS CA+ L +GR +H Y
Sbjct: 210 AWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVHVY 269
Query: 448 AVRNLMD-------DNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGM 500
A++ M D+++VG L++MY KCG+ VF + R++++WN+L SG M
Sbjct: 270 ALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAM 329
Query: 501 HGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVE 560
HG G + F +MI+ +KPD +TF LSACSH+G+V G F+ + R + +EP V+
Sbjct: 330 HGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVD 387
Query: 561 HYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTL 620
HYAC+VDLLGRAGL++EA ++R MP+ PNE + G+LL SC H +I E +++ +
Sbjct: 388 HYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHGKVEIAERIKRELIQM 447
Query: 621 NSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIV 680
+ T +L+SN+Y A GR + + +R S +K+G++K PG S I V V+ FS+G+
Sbjct: 448 SPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDRS 507
Query: 681 HLGLDEVYVILEELALQMANENY 703
H E+Y+ L E+ ++ + Y
Sbjct: 508 HPRTKEIYLKLNEVIERIRSAGY 530
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 182/386 (47%), Gaps = 26/386 (6%)
Query: 50 LLQQC---STLQQARQLHSQTILTAAYRKP--FLAAKLIALYARFGSVSHAQKVFNAVPF 104
LL+ C S L+ ++LH+ + + P +L+ L YA G + AQK+F+ +P
Sbjct: 12 LLRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPL 71
Query: 105 ERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLC 164
D++ W +++ + +G +++++V MR+ D ++ + C+ L
Sbjct: 72 SEKDNVD-WTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFA 130
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
+ H A+++G + V N L+ MYGK G + + ++F+ + ++++SW ++
Sbjct: 131 QQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKW 190
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTR-GCEISAEA 283
+F M N+V WT +++ + G E LEL M R G ++
Sbjct: 191 EGLERGREVFHEMP----ERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVT 246
Query: 284 LAVVISVCADVVEVDRSREIHGYVIK--------GGYEDYLFVKNALIDTYRKHKHLGDA 335
L ++S CA + R +H Y +K Y+D + V AL+D Y K ++ +
Sbjct: 247 LCSMLSACAQSGNLVVGRWVHVYALKKEMMMGEEASYDD-VMVGTALVDMYAKCGNIDSS 305
Query: 336 HNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVIS 395
NVF ++ +N+ +WNAL S A G + V+ + + + ++P+ ++++AV+S
Sbjct: 306 MNVFRLMRKRNVVTWNALFSGLAMHG---KGRMVIDMFPQMI---REVKPDDLTFTAVLS 359
Query: 396 GFASKGCGEESLELFRRMQLAKVKPN 421
+ G +E F ++ ++P
Sbjct: 360 ACSHSGIVDEGWRCFHSLRFYGLEPK 385
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 293 bits (749), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 185/623 (29%), Positives = 304/623 (48%), Gaps = 82/623 (13%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
+ L+ +CS+L+ +Q+ +Q I R + K++ + + V
Sbjct: 9 LLELISRCSSLRVFKQIQTQLITRDLLRDDLIINKVVTFLGKSADFASYSSVILHSIRSV 68
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRI 166
L +N+++ + I Y GF PD FT P + +AC +
Sbjct: 69 LSSFS-YNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQ 127
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHD 226
+H ++GF + ++V N LV YG G +AC++F MPVR +
Sbjct: 128 IHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDV--------------- 172
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
V+WT +++ R GLY E L+ F M E +
Sbjct: 173 --------------------VSWTGIITGFTRTGLYKEALDTFSKMDV---EPNLATYVC 209
Query: 287 VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKN 346
V+ V + + IHG ++K + +LI +
Sbjct: 210 VLVSSGRVGCLSLGKGIHGLILK---------RASLI----------------------S 238
Query: 347 LESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEES 406
LE+ NALI Y + +A V +LEK + +SW+++ISG +E+
Sbjct: 239 LETGNALIDMYVKCEQLSDAMRVFGELEKK---------DKVSWNSMISGLVHCERSKEA 289
Query: 407 LELFRRMQLAK-VKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLIN 465
++LF MQ + +KP+ ++VLS CA L A++ GR +H Y + + + +G +++
Sbjct: 290 IDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVD 349
Query: 466 MYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVT 525
MY KCG + +F+ I +++ +WN+L+ G +HG G +L F+EM+K G KP+ VT
Sbjct: 350 MYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVT 409
Query: 526 FVTALSACSHAGLVAAGRNLFYQM-VREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRN 584
F+ AL+AC H GLV GR F++M RE+ + P +EHY C++DLL RAGLL EA ++V+
Sbjct: 410 FLAALNACCHTGLVDEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKA 469
Query: 585 MPIEPNEYIWGALLNSCRTHKD-TKIVEETASQILTLNSQITGSFMLLSNIYAANGRWED 643
MP++P+ I GA+L++C+ ++ +E L + + +G ++LLSNI+AAN RW+D
Sbjct: 470 MPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDD 529
Query: 644 SARVRISAKKKGLKKTPGQSWIE 666
AR+R K KG+ K PG S+IE
Sbjct: 530 VARIRRLMKVKGISKVPGSSYIE 552
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 292 bits (748), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 166/451 (36%), Positives = 255/451 (56%), Gaps = 13/451 (2%)
Query: 246 SVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSRE--I 303
+V+WTS ++ R G E + F M G E + ++S C D + +
Sbjct: 36 TVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLL 95
Query: 304 HGYVIKGGYE-DYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGL 362
HGY K G + +++ V A+I Y K A VF +++KN +WN +I Y SG
Sbjct: 96 HGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQ 155
Query: 363 CEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNC 422
+ A + ++ P R ++ISW+A+I+GF KG EE+L FR MQ++ VKP+
Sbjct: 156 VDNAAKMFDKM--------PER-DLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDY 206
Query: 423 VTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDN 482
V L+ C L AL+ G +H Y + +N+ V N LI++Y +CG + VF N
Sbjct: 207 VAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYN 266
Query: 483 IEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAG 542
+E R ++SWNS+I G+ +G +L F +M + G KPD VTF AL+ACSH GLV G
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326
Query: 543 RNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCR 602
F M ++RI P +EHY CLVDL RAG L++A +V++MP++PNE + G+LL +C
Sbjct: 327 LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACS 386
Query: 603 THKDTKIVEETASQILT-LNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPG 661
H + ++ E + LT LN + ++++LSN+YAA+G+WE ++++R K GLKK PG
Sbjct: 387 NHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPG 446
Query: 662 QSWIEVRKKVYTFSAGNIVHLGLDEVYVILE 692
S IE+ ++ F AG+ H+ + +LE
Sbjct: 447 FSSIEIDDCMHVFMAGDNAHVETTYIREVLE 477
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/428 (25%), Positives = 189/428 (44%), Gaps = 80/428 (18%)
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHL--GSSSLCRIVHCH 170
W S I +G A + + M G P+ T ++ C GS +L ++H +
Sbjct: 39 WTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGY 98
Query: 171 ALELGF-RNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVG 229
A +LG RNH+ V ++GMY K GR + A +FD M + ++WNTM+ GY +
Sbjct: 99 ACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDN 158
Query: 230 ASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVIS 289
A+++F +M D ++WT++++ + G +E L F+ M+ G + A+ ++
Sbjct: 159 AAKMFDKMPERDL----ISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALN 214
Query: 290 VCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLES 349
C ++ + +H YV+ +++ + V N+LID Y + + A VF++++ + + S
Sbjct: 215 ACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVS 274
Query: 350 WNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLEL 409
WN++I +A +G AH ESL
Sbjct: 275 WNSVIVGFAANG---NAH-------------------------------------ESLVY 294
Query: 410 FRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMK 469
FR+MQ KP+ VTF+ L+ C+ + + G L + + MK
Sbjct: 295 FRKMQEKGFKPDAVTFTGALTACSHVGLVEEG--LRYFQI------------------MK 334
Query: 470 CGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTA 529
C D++ + IE + L+ Y G ++AL M MKP+ V +
Sbjct: 335 C-DYR----ISPRIE-----HYGCLVDLYSRAGRLEDALKLVQSM---PMKPNEVVIGSL 381
Query: 530 LSACSHAG 537
L+ACS+ G
Sbjct: 382 LAACSNHG 389
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 121/241 (50%), Gaps = 37/241 (15%)
Query: 380 HQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALN 439
+Q +SW++ I+ G E+ + F M LA V+PN +TF +LS C + + +
Sbjct: 29 NQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGS 88
Query: 440 --LGRELHGYAVRNLMDDN-ILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLIS 496
LG LHGYA + +D N ++VG +I MY K G FKK LVFD +E ++ ++WN++I
Sbjct: 89 EALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMID 148
Query: 497 GYGMHGLGDNALTTFD-------------------------------EMIKAGMKPDHVT 525
GY G DNA FD EM +G+KPD+V
Sbjct: 149 GYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVA 208
Query: 526 FVTALSACSHAGLVAAGRNLF-YQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRN 584
+ AL+AC++ G ++ G + Y + ++F+ V + L+DL R G ++ A + N
Sbjct: 209 IIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSN--SLIDLYCRCGCVEFARQVFYN 266
Query: 585 M 585
M
Sbjct: 267 M 267
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/192 (33%), Positives = 112/192 (58%), Gaps = 3/192 (1%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGF 141
+I Y R G V +A K+F+ +P ER D I W ++I V GY E A+ + M+ G
Sbjct: 146 MIDGYMRSGQVDNAAKMFDKMP-ER-DLIS-WTAMINGFVKKGYQEEALLWFREMQISGV 202
Query: 142 FPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQ 201
PD + + AC++LG+ S VH + L F+N++ V N L+ +Y + G +E A Q
Sbjct: 203 KPDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQ 262
Query: 202 LFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGL 261
+F M RT++SWN+++ G+A N + + F++M+ + ++P++VT+T L++ GL
Sbjct: 263 VFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGL 322
Query: 262 YDETLELFKLMR 273
+E L F++M+
Sbjct: 323 VEEGLRYFQIMK 334
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGF 141
LI LY R G V A++VF + + WNS+I ++G ++ + M++ GF
Sbjct: 247 LIDLYCRCGCVEFARQVFYNMEKRT---VVSWNSVIVGFAANGNAHESLVYFRKMQEKGF 303
Query: 142 FPDGFTLPLIIEACSHLG-SSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDAC 200
PD T + ACSH+G R + + LV +Y + GR+EDA
Sbjct: 304 KPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDAL 363
Query: 201 QLFDGMPVR 209
+L MP++
Sbjct: 364 KLVQSMPMK 372
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 292 bits (748), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 189/625 (30%), Positives = 295/625 (47%), Gaps = 83/625 (13%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGF 141
L+ +YA G A VF +P + L WNS++ + V+ G A+ + M G
Sbjct: 285 LLRMYAGAGRSVEANLVFKQMPTKDLIS---WNSLMASFVNDGRSLDALGLLCSMISSGK 341
Query: 142 FPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQ 201
+ T + AC RI+H + G + + N LV MYGK+G M ++ +
Sbjct: 342 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 401
Query: 202 LFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGL 261
+ MP R +++WN ++ GYA ED P
Sbjct: 402 VLLQMPRRDVVAWNALIGGYA-----------------EDEDP----------------- 427
Query: 262 YDETLELFKLMRTRGCEISAEALAVVISVC---ADVVEVDRSREIHGYVIKGGYEDYLFV 318
D+ L F+ MR G + + V+S C D++E R + +H Y++ G+E V
Sbjct: 428 -DKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE--RGKPLHAYIVSAGFESDEHV 484
Query: 319 KNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLD 378
KN+LI Y K L + ++F + N+N
Sbjct: 485 KNSLITMYAKCGDLSSSQDLFNGLDNRN-------------------------------- 512
Query: 379 GHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAAL 438
+I+W+A+++ A G GEE L+L +M+ V + +FS LS A+LA L
Sbjct: 513 --------IITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVL 564
Query: 439 NLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGY 498
G++LHG AV+ + + + N +MY KCG+ + + R L SWN LIS
Sbjct: 565 EEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISAL 624
Query: 499 GMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPT 558
G HG + TF EM++ G+KP HVTFV+ L+ACSH GLV G + + R+F +EP
Sbjct: 625 GRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPA 684
Query: 559 VEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQIL 618
+EH C++DLLGR+G L EA + MP++PN+ +W +LL SC+ H + + A +
Sbjct: 685 IEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLS 744
Query: 619 TLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGN 678
L + ++L SN++A GRWED VR K +KK SW++++ KV +F G+
Sbjct: 745 KLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGD 804
Query: 679 IVHLGLDEVYVILEELALQMANENY 703
H E+Y LE++ + Y
Sbjct: 805 RTHPQTMEIYAKLEDIKKLIKESGY 829
Score = 173 bits (438), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 147/565 (26%), Positives = 247/565 (43%), Gaps = 83/565 (14%)
Query: 55 STLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWN 114
S ++ Q+H + +++ ++ LY +G VS ++KVF +P +R ++ W
Sbjct: 56 SMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP-DR--NVVSWT 112
Query: 115 SIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALEL 174
S++ G E I+IY GMR G + ++ L+I +C L SL R + ++
Sbjct: 113 SLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS 172
Query: 175 GFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIF 234
G + L V N L+ M G +G ++ A +FD M R +SWN++ + YA N + RIF
Sbjct: 173 GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 232
Query: 235 KRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADV 294
LMR E+++ ++ ++SV V
Sbjct: 233 -----------------------------------SLMRRFHDEVNSTTVSTLLSVLGHV 257
Query: 295 VEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALI 354
R IHG V+K G++ + V N L+ Y +A+ VF + K+L SWN+L+
Sbjct: 258 DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLM 317
Query: 355 SSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQ 414
+S+ G +SLD +L L M
Sbjct: 318 ASFVNDG-------------RSLD---------------------------ALGLLCSMI 337
Query: 415 LAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFK 474
+ N VTF++ L+ C GR LHG V + + N ++GN L++MY K G+
Sbjct: 338 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 397
Query: 475 KGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACS 534
+ V + RD+++WN+LI GY D AL F M G+ +++T V+ LSAC
Sbjct: 398 ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 457
Query: 535 HAG-LVAAGRNLFYQMVRE-FRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEY 592
G L+ G+ L +V F + V++ L+ + + G L + D+ + N
Sbjct: 458 LPGDLLERGKPLHAYIVSAGFESDEHVKN--SLITMYAKCGDLSSSQDLFNGLD-NRNII 514
Query: 593 IWGALLNSCRTHKDTKIVEETASQI 617
W A+L + H + V + S++
Sbjct: 515 TWNAMLAANAHHGHGEEVLKLVSKM 539
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 133/527 (25%), Positives = 224/527 (42%), Gaps = 87/527 (16%)
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRI-VHCHA 171
WN+++ V G + +E + M G P F + ++ AC GS + VH
Sbjct: 9 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 68
Query: 172 LELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGAS 231
+ G + ++V ++ +YG G + + ++F+ MP R
Sbjct: 69 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDR---------------------- 106
Query: 232 RIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVC 291
N V+WTSL+ + G +E ++++K MR G + ++++VIS C
Sbjct: 107 -------------NVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC 153
Query: 292 ADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWN 351
+ + R+I G V+K G E L V+N+LI LG NV +
Sbjct: 154 GLLKDESLGRQIIGQVVKSGLESKLAVENSLISM------LGSMGNVDY----------- 196
Query: 352 ALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFR 411
A+ + Q+ + + ISW+++ + +A G EES +F
Sbjct: 197 --------------ANYIFDQMSER---------DTISWNSIAAAYAQNGHIEESFRIFS 233
Query: 412 RMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCG 471
M+ + N T ST+LSV + GR +HG V+ D + V N L+ MY G
Sbjct: 234 LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAG 293
Query: 472 DFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALS 531
+ +LVF + +DLISWNSL++ + G +AL MI +G ++VTF +AL+
Sbjct: 294 RSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALA 353
Query: 532 ACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNE 591
AC GR L +V + A LV + G+ G + E+ ++ MP +
Sbjct: 354 ACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA-LVSMYGKIGEMSESRRVLLQMP-RRDV 411
Query: 592 YIWGALLNSCRTHKD---------TKIVEETASQILTLNSQITGSFM 629
W AL+ +D T VE +S +T+ S ++ +
Sbjct: 412 VAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLL 458
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 90/357 (25%), Positives = 163/357 (45%), Gaps = 43/357 (12%)
Query: 245 NSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSR-EI 303
N V+W +++S R GLY E +E F+ M G + S+ +A +++ C + R ++
Sbjct: 5 NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQV 64
Query: 304 HGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLC 363
HG+V K G ++V A++ Y + + + VF ++ ++N+ SW +L+ Y++ G
Sbjct: 65 HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEP 124
Query: 364 EEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCV 423
EE +D ++ +R + GC E S+ L
Sbjct: 125 EEV----------IDIYKGMRGEGV------------GCNENSMSL-------------- 148
Query: 424 TFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNI 483
V+S C L +LGR++ G V++ ++ + V N LI+M G+ + +FD +
Sbjct: 149 ----VISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQM 204
Query: 484 EGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGR 543
RD ISWNS+ + Y +G + + F M + + + T T LS H GR
Sbjct: 205 SERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGR 264
Query: 544 NLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNS 600
+ + +V + + V L+ + AG EAN + + MP + + W +L+ S
Sbjct: 265 GI-HGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTK-DLISWNSLMAS 319
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 105/217 (48%), Gaps = 4/217 (1%)
Query: 382 PLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAAL-NL 440
P+R N +SW+ ++SG G E +E FR+M +KP+ +++++ C ++
Sbjct: 2 PVR-NEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 441 GRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGM 500
G ++HG+ ++ + ++ V ++++Y G VF+ + R+++SW SL+ GY
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 501 HGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVE 560
G + + + M G+ + + +S+C + GR + Q+V+ +E +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS-GLESKLA 179
Query: 561 HYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGAL 597
L+ +LG G + AN I M E + W ++
Sbjct: 180 VENSLISMLGSMGNVDYANYIFDQMS-ERDTISWNSI 215
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 13/173 (7%)
Query: 53 QCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPL 112
+ + L++ +QLH + F+ +Y++ G + K+ +P +P
Sbjct: 560 KLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKM---LPPSVNRSLPS 616
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSH-----LGSSSLCRIV 167
WN +I A HGYFE + M + G P T ++ ACSH G + I
Sbjct: 617 WNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIA 676
Query: 168 HCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR-TILSWNTMVS 219
LE + + V++ L G+ GR+ +A MP++ L W ++++
Sbjct: 677 RDFGLEPAIEHCICVIDLL----GRSGRLAEAETFISKMPMKPNDLVWRSLLA 725
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 292 bits (747), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 194/672 (28%), Positives = 326/672 (48%), Gaps = 87/672 (12%)
Query: 47 FITLLQQC---STLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F LL+QC ++ + + + +L + + +KL+ + G + +A++VF+ +
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAH-MLKSGFPAEISGSKLVDASLKCGDIDYARQVFDGMS 126
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
ER HI WNS+I + H + A+E+Y M PD +TL + +A S L
Sbjct: 127 -ER--HIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKE 183
Query: 164 CRIVHCHALELGFR-NHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYA 222
+ H A+ LG +++ V + LV MY K G+ +A + D + + ++ ++ GY+
Sbjct: 184 AQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYS 243
Query: 223 FNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAE 282
+ A + F+ M +E +PN T+ S+L S
Sbjct: 244 QKGEDTEAVKAFQSMLVEKVQPNEYTYASVLIS--------------------------- 276
Query: 283 ALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDI 342
C ++ ++ + IHG ++K G+E L + +L+ Y + + D+ VF I
Sbjct: 277 --------CGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLRVFKCI 328
Query: 343 KNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGC 402
+ PN +SW+++ISG G
Sbjct: 329 E----------------------------------------YPNQVSWTSLISGLVQNGR 348
Query: 403 GEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNG 462
E +L FR+M +KPN T S+ L C+ LA GR++HG + D + G+G
Sbjct: 349 EEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSG 408
Query: 463 LINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPD 522
LI++Y KCG LVFD + D+IS N++I Y +G G AL F+ MI G++P+
Sbjct: 409 LIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPN 468
Query: 523 HVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIV 582
VT ++ L AC+++ LV G LF R+ +I T +HYAC+VDLLGRAG L+EA +++
Sbjct: 469 DVTVLSVLLACNNSRLVEEGCELF-DSFRKDKIMLTNDHYACMVDLLGRAGRLEEA-EML 526
Query: 583 RNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWE 642
I P+ +W LL++C+ H+ ++ E +IL + G+ +L+SN+YA+ G+W
Sbjct: 527 TTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWN 586
Query: 643 DSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIV-HLGLDEVYVILEELALQMANE 701
++ K LKK P SW+E+ K+ +TF AG++ H +++ LEEL + +
Sbjct: 587 RVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDL 646
Query: 702 NY-ELNSCFNQE 712
Y E SC Q+
Sbjct: 647 GYVEDKSCVFQD 658
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 292 bits (747), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 189/625 (30%), Positives = 295/625 (47%), Gaps = 83/625 (13%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGF 141
L+ +YA G A VF +P + L WNS++ + V+ G A+ + M G
Sbjct: 302 LLRMYAGAGRSVEANLVFKQMPTKDLIS---WNSLMASFVNDGRSLDALGLLCSMISSGK 358
Query: 142 FPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQ 201
+ T + AC RI+H + G + + N LV MYGK+G M ++ +
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 418
Query: 202 LFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGL 261
+ MP R +++WN ++ GYA ED P
Sbjct: 419 VLLQMPRRDVVAWNALIGGYA-----------------EDEDP----------------- 444
Query: 262 YDETLELFKLMRTRGCEISAEALAVVISVC---ADVVEVDRSREIHGYVIKGGYEDYLFV 318
D+ L F+ MR G + + V+S C D++E R + +H Y++ G+E V
Sbjct: 445 -DKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE--RGKPLHAYIVSAGFESDEHV 501
Query: 319 KNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLD 378
KN+LI Y K L + ++F + N+N
Sbjct: 502 KNSLITMYAKCGDLSSSQDLFNGLDNRN-------------------------------- 529
Query: 379 GHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAAL 438
+I+W+A+++ A G GEE L+L +M+ V + +FS LS A+LA L
Sbjct: 530 --------IITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVL 581
Query: 439 NLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGY 498
G++LHG AV+ + + + N +MY KCG+ + + R L SWN LIS
Sbjct: 582 EEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISAL 641
Query: 499 GMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPT 558
G HG + TF EM++ G+KP HVTFV+ L+ACSH GLV G + + R+F +EP
Sbjct: 642 GRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPA 701
Query: 559 VEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQIL 618
+EH C++DLLGR+G L EA + MP++PN+ +W +LL SC+ H + + A +
Sbjct: 702 IEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLS 761
Query: 619 TLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGN 678
L + ++L SN++A GRWED VR K +KK SW++++ KV +F G+
Sbjct: 762 KLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGD 821
Query: 679 IVHLGLDEVYVILEELALQMANENY 703
H E+Y LE++ + Y
Sbjct: 822 RTHPQTMEIYAKLEDIKKLIKESGY 846
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 147/565 (26%), Positives = 247/565 (43%), Gaps = 83/565 (14%)
Query: 55 STLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWN 114
S ++ Q+H + +++ ++ LY +G VS ++KVF +P +R ++ W
Sbjct: 73 SMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP-DR--NVVSWT 129
Query: 115 SIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALEL 174
S++ G E I+IY GMR G + ++ L+I +C L SL R + ++
Sbjct: 130 SLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKS 189
Query: 175 GFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIF 234
G + L V N L+ M G +G ++ A +FD M R +SWN++ + YA N + RIF
Sbjct: 190 GLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIF 249
Query: 235 KRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADV 294
LMR E+++ ++ ++SV V
Sbjct: 250 -----------------------------------SLMRRFHDEVNSTTVSTLLSVLGHV 274
Query: 295 VEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALI 354
R IHG V+K G++ + V N L+ Y +A+ VF + K+L SWN+L+
Sbjct: 275 DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLM 334
Query: 355 SSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQ 414
+S+ G +SLD +L L M
Sbjct: 335 ASFVNDG-------------RSLD---------------------------ALGLLCSMI 354
Query: 415 LAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFK 474
+ N VTF++ L+ C GR LHG V + + N ++GN L++MY K G+
Sbjct: 355 SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 414
Query: 475 KGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACS 534
+ V + RD+++WN+LI GY D AL F M G+ +++T V+ LSAC
Sbjct: 415 ESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACL 474
Query: 535 HAG-LVAAGRNLFYQMVRE-FRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEY 592
G L+ G+ L +V F + V++ L+ + + G L + D+ + N
Sbjct: 475 LPGDLLERGKPLHAYIVSAGFESDEHVKN--SLITMYAKCGDLSSSQDLFNGLD-NRNII 531
Query: 593 IWGALLNSCRTHKDTKIVEETASQI 617
W A+L + H + V + S++
Sbjct: 532 TWNAMLAANAHHGHGEEVLKLVSKM 556
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 140/555 (25%), Positives = 239/555 (43%), Gaps = 90/555 (16%)
Query: 85 LYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPD 144
+Y +FG V A+ +F+ +P + + WN+++ V G + +E + M G P
Sbjct: 1 MYTKFGRVKPARHLFDIMP---VRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPS 57
Query: 145 GFTLPLIIEACSHLGSSSLCRI-VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLF 203
F + ++ AC GS + VH + G + ++V ++ +YG G + + ++F
Sbjct: 58 SFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVF 117
Query: 204 DGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYD 263
+ MP R N V+WTSL+ + G +
Sbjct: 118 EEMPDR-----------------------------------NVVSWTSLMVGYSDKGEPE 142
Query: 264 ETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALI 323
E ++++K MR G + ++++VIS C + + R+I G V+K G E L V+N+LI
Sbjct: 143 EVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLI 202
Query: 324 DTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPL 383
LG NV + A+ + Q+ +
Sbjct: 203 SM------LGSMGNVDY-------------------------ANYIFDQMSER------- 224
Query: 384 RPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRE 443
+ ISW+++ + +A G EES +F M+ + N T ST+LSV + GR
Sbjct: 225 --DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRG 282
Query: 444 LHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGL 503
+HG V+ D + V N L+ MY G + +LVF + +DLISWNSL++ + G
Sbjct: 283 IHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGR 342
Query: 504 GDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYA 563
+AL MI +G ++VTF +AL+AC GR L +V + A
Sbjct: 343 SLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNA 402
Query: 564 CLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKD---------TKIVEETA 614
LV + G+ G + E+ ++ MP + W AL+ +D T VE +
Sbjct: 403 -LVSMYGKIGEMSESRRVLLQMP-RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 460
Query: 615 SQILTLNSQITGSFM 629
S +T+ S ++ +
Sbjct: 461 SNYITVVSVLSACLL 475
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 13/173 (7%)
Query: 53 QCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPL 112
+ + L++ +QLH + F+ +Y++ G + K+ +P +P
Sbjct: 577 KLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKM---LPPSVNRSLPS 633
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSH-----LGSSSLCRIV 167
WN +I A HGYFE + M + G P T ++ ACSH G + I
Sbjct: 634 WNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIA 693
Query: 168 HCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR-TILSWNTMVS 219
LE + + V++ L G+ GR+ +A MP++ L W ++++
Sbjct: 694 RDFGLEPAIEHCICVIDLL----GRSGRLAEAETFISKMPMKPNDLVWRSLLA 742
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 292 bits (747), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 187/662 (28%), Positives = 331/662 (50%), Gaps = 76/662 (11%)
Query: 44 EDFFITLLQQCSTLQQAR---QLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFN 100
+ + ++L+ C+ L + R QLH+ + + + + +YA+ ++ AQ +F+
Sbjct: 281 QSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFD 340
Query: 101 AVPFERLDHIPLWNSIIR--ANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHL 158
E L+ +N++I + HG+ A+ ++ + G D +L + AC+ +
Sbjct: 341 NS--ENLNRQS-YNAMITGYSQEEHGFK--ALLLFHRLMSSGLGFDEISLSGVFRACALV 395
Query: 159 GSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMV 218
S ++ A++ + V N + MYGK + +A ++FD M
Sbjct: 396 KGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMR----------- 444
Query: 219 SGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCE 278
R ++V+W +++++H++ G ETL LF M E
Sbjct: 445 ------------------------RRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIE 480
Query: 279 ISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDA--- 335
++ C + EIH ++K G V +LID Y K + +A
Sbjct: 481 PDEFTFGSILKACTGG-SLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKI 539
Query: 336 HNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVIS 395
H+ FF N SG EE LEK ++ L+ +SW+++IS
Sbjct: 540 HSRFFQRANV--------------SGTMEE-------LEKM--HNKRLQEMCVSWNSIIS 576
Query: 396 GFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDD 455
G+ K E++ LF RM + P+ T++TVL CA LA+ LG+++H ++ +
Sbjct: 577 GYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQS 636
Query: 456 NILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMI 515
++ + + L++MY KCGD L+F+ RD ++WN++I GY HG G+ A+ F+ MI
Sbjct: 637 DVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMI 696
Query: 516 KAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLL 575
+KP+HVTF++ L AC+H GL+ G FY M R++ ++P + HY+ +VD+LG++G +
Sbjct: 697 LENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKV 756
Query: 576 QEANDIVRNMPIEPNEYIWGALLNSCRTHK-DTKIVEETASQILTLNSQITGSFMLLSNI 634
+ A +++R MP E ++ IW LL C H+ + ++ EE + +L L+ Q + ++ LLSN+
Sbjct: 757 KRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNV 816
Query: 635 YAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEEL 694
YA G WE + +R + + LKK PG SW+E++ +++ F G+ H +E+Y EEL
Sbjct: 817 YADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIY---EEL 873
Query: 695 AL 696
L
Sbjct: 874 GL 875
Score = 172 bits (435), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 118/489 (24%), Positives = 217/489 (44%), Gaps = 81/489 (16%)
Query: 148 LPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMP 207
+ + C+ G+ L + H H + GFR V+N L+ +Y A +FD MP
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 208 VRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLE 267
+R ++SWN M++GY+ ++D A+ F M + D V+W S+LS + + G +++E
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRD----VVSWNSMLSGYLQNGESLKSIE 166
Query: 268 LFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYR 327
+F M G E A+++ VC+ + + +IHG V++ G + + +AL+D Y
Sbjct: 167 VFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYA 226
Query: 328 KHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNV 387
K K ++ VF I KN SW+A+I+ ++ L A
Sbjct: 227 KGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA--------------------- 265
Query: 388 ISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGY 447
L+ F+ MQ + +++VL CA L+ L LG +LH +
Sbjct: 266 -------------------LKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAH 306
Query: 448 AVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNA 507
A+++ + +V ++MY KC + + ++FDN E + S+N++I+GY G A
Sbjct: 307 ALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKA 366
Query: 508 LTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVR-EFRIEPTVEHYACLV 566
L F ++ +G+ D ++ AC+ ++ G ++ ++ ++ V + A +
Sbjct: 367 LLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAA--I 424
Query: 567 DLLGRAGLLQEANDIVRNM----------------------------------PIEPNEY 592
D+ G+ L EA + M IEP+E+
Sbjct: 425 DMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEF 484
Query: 593 IWGALLNSC 601
+G++L +C
Sbjct: 485 TFGSILKAC 493
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 120/502 (23%), Positives = 228/502 (45%), Gaps = 82/502 (16%)
Query: 81 KLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFG 140
K+I Y++ + A FN +P + + WNS++ + +G +IE++V M + G
Sbjct: 119 KMINGYSKSNDMFKANSFFNMMP---VRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREG 175
Query: 141 FFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDAC 200
DG T +I++ CS L +SL +H + +G + + L+ MY K R ++
Sbjct: 176 IEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESL 235
Query: 201 QLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCG 260
++F G+P + NSV+W+++++ +
Sbjct: 236 RVFQGIPEK-----------------------------------NSVSWSAIIAGCVQNN 260
Query: 261 LYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKN 320
L L+ FK M+ +S A V+ CA + E+ ++H + +K + V+
Sbjct: 261 LLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRT 320
Query: 321 ALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGH 380
A +D Y K ++ DA +F + +N N +S+NA+I+ Y+ +E H
Sbjct: 321 ATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYS-----QEEH------------- 362
Query: 381 QPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNL 440
G ++L LF R+ + + + ++ S V CA + L+
Sbjct: 363 ----------------------GFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSE 400
Query: 441 GRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGM 500
G +++G A+++ + ++ V N I+MY KC + VFD + RD +SWN++I+ +
Sbjct: 401 GLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQ 460
Query: 501 HGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVE 560
+G G L F M+++ ++PD TF + L AC+ G + G + +V+ +
Sbjct: 461 NGKGYETLFLFVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNS-- 517
Query: 561 HYAC-LVDLLGRAGLLQEANDI 581
C L+D+ + G+++EA I
Sbjct: 518 SVGCSLIDMYSKCGMIEEAEKI 539
Score = 112 bits (280), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 149/307 (48%), Gaps = 12/307 (3%)
Query: 279 ISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNV 338
+S + V CA ++ ++ H ++I G+ FV N L+ Y + A V
Sbjct: 46 VSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMV 105
Query: 339 FFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFA 398
F + +++ SWN +I+ Y++S +A++ + P+R +V+SW++++SG+
Sbjct: 106 FDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMM--------PVR-DVVSWNSMLSGYL 156
Query: 399 SKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNIL 458
G +S+E+F M ++ + TF+ +L VC+ L +LG ++HG VR D +++
Sbjct: 157 QNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVV 216
Query: 459 VGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAG 518
+ L++MY K F + VF I ++ +SW+++I+G + L AL F EM K
Sbjct: 217 AASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVN 276
Query: 519 MKPDHVTFVTALSACSHAGLVAAGRNLFYQMVR-EFRIEPTVEHYACLVDLLGRAGLLQE 577
+ + L +C+ + G L ++ +F + V +D+ + +Q+
Sbjct: 277 AGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVR--TATLDMYAKCDNMQD 334
Query: 578 ANDIVRN 584
A + N
Sbjct: 335 AQILFDN 341
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 291 bits (746), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 176/587 (29%), Positives = 315/587 (53%), Gaps = 24/587 (4%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGF 141
+++ +A+ G +S A+++FNA+P + D + L NS++ + +GY E A+ ++ ++ F
Sbjct: 130 VVSGFAKAGELSVARRLFNAMPEK--DVVTL-NSLLHGYILNGYAEEALRLF---KELNF 183
Query: 142 FPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQ 201
D TL +++AC+ L + + +H L G + + LV +Y K G + A
Sbjct: 184 SADAITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASY 243
Query: 202 LFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNS--VTWTSLLSSHKRC 259
+ + + S + ++SGYA R+ + L D + N + W S++S +
Sbjct: 244 MLEQIREPDDHSLSALISGYA------NCGRVNESRGLFDRKSNRCVILWNSMISGYIAN 297
Query: 260 GLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVK 319
+ E L LF MR E S LA VI+ C + ++ +++H + K G D + V
Sbjct: 298 NMKMEALVLFNEMRNETREDS-RTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVA 356
Query: 320 NALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDG 379
+ L+D Y K +A +F ++++ + N++I Y G ++A V ++E
Sbjct: 357 STLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIEN---- 412
Query: 380 HQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALN 439
++ISW+++ +GF+ GC E+LE F +M + + V+ S+V+S CA +++L
Sbjct: 413 -----KSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLE 467
Query: 440 LGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYG 499
LG ++ A +D + +V + LI++Y KCG + G VFD + D + WNS+ISGY
Sbjct: 468 LGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYA 527
Query: 500 MHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTV 559
+G G A+ F +M AG++P +TF+ L+AC++ GLV GR LF M + P
Sbjct: 528 TNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDK 587
Query: 560 EHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILT 619
EH++C+VDLL RAG ++EA ++V MP + + +W ++L C + + ++ A +I+
Sbjct: 588 EHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIE 647
Query: 620 LNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIE 666
L + + +++ LS I+A +G WE SA VR ++ + K PG SW +
Sbjct: 648 LEPENSVAYVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 133/516 (25%), Positives = 231/516 (44%), Gaps = 80/516 (15%)
Query: 151 IIEACSHLGSSSLCRIVHCHALELGFRNHLHVV-NKLVGMYGKLGRMEDACQLFDGMPVR 209
++++CS +L R + L+ GF + + +V N L+ MY + G+M A LFD MP R
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 210 TILSWNTMVSGYAFNHDCVGASRIFKRMELED---W------------------------ 242
SWNTM+ GY + + + R F M D W
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMMPERDGYSWNVVVSGFAKAGELSVARRLFNAMP 151
Query: 243 RPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA--LAVVISVCADVVEVDRS 300
+ VT SLL + G +E L LFK + SA+A L V+ CA++ +
Sbjct: 152 EKDVVTLNSLLHGYILNGYAEEALRLFKELN-----FSADAITLTTVLKACAELEALKCG 206
Query: 301 REIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAES 360
++IH ++ GG E + ++L++ Y K L A + I+ + S +ALIS YA
Sbjct: 207 KQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSLSALISGYANC 266
Query: 361 GLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKP 420
G E+ + + VI W+++ISG+ + E+L LF M+ + +
Sbjct: 267 GRVNESRGLF---------DRKSNRCVILWNSMISGYIANNMKMEALVLFNEMR-NETRE 316
Query: 421 NCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGD-------- 472
+ T + V++ C L L G+++H +A + + D+I+V + L++MY KCG
Sbjct: 317 DSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLF 376
Query: 473 ------------------FKKGHL-----VFDNIEGRDLISWNSLISGYGMHGLGDNALT 509
F G + VF+ IE + LISWNS+ +G+ +G L
Sbjct: 377 SEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLE 436
Query: 510 TFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQ-MVREFRIEPTVEHYACLVDL 568
F +M K + D V+ + +SAC+ + G +F + + + V + L+DL
Sbjct: 437 YFHQMHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQVVS--SSLIDL 494
Query: 569 LGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTH 604
+ G ++ + M ++ +E W ++++ T+
Sbjct: 495 YCKCGFVEHGRRVFDTM-VKSDEVPWNSMISGYATN 529
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 110/245 (44%), Gaps = 28/245 (11%)
Query: 57 LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP------------- 103
L+ +Q+H +A+ L+ +Y++ GS A K+F+ V
Sbjct: 334 LETGKQMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKV 393
Query: 104 -------------FERLDHIPL--WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTL 148
FER+++ L WNS+ +G +E + M K D +L
Sbjct: 394 YFSCGRIDDAKRVFERIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSL 453
Query: 149 PLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPV 208
+I AC+ + S L V A +G + V + L+ +Y K G +E ++FD M
Sbjct: 454 SSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVK 513
Query: 209 RTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLEL 268
+ WN+M+SGYA N A +FK+M + RP +T+ +L++ CGL +E +L
Sbjct: 514 SDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKL 573
Query: 269 FKLMR 273
F+ M+
Sbjct: 574 FESMK 578
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 108/229 (47%), Gaps = 8/229 (3%)
Query: 48 ITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERL 107
I+ S+L+ Q+ ++ + +++ LI LY + G V H ++VF+ + +
Sbjct: 457 ISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMV--KS 514
Query: 108 DHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCR-I 166
D +P WNS+I ++G AI+++ M G P T +++ AC++ G R +
Sbjct: 515 DEVP-WNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKL 573
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILS-WNTMVSGYAFN- 224
++ GF + +V + + G +E+A L + MP S W++++ G N
Sbjct: 574 FESMKVDHGFVPDKEHFSCMVDLLARAGYVEEAINLVEEMPFDVDGSMWSSILRGCVANG 633
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMR 273
+ +G K +ELE NSV + L + G ++ + + KLMR
Sbjct: 634 YKAMGKKAAEKIIELEP--ENSVAYVQLSAIFATSGDWESSALVRKLMR 680
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 291 bits (745), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 160/475 (33%), Positives = 258/475 (54%), Gaps = 45/475 (9%)
Query: 230 ASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVIS 289
A+ IF+ ++ P + + +++ + ++E L + M RG E ++
Sbjct: 85 AASIFRGID----DPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLK 140
Query: 290 VCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLES 349
C + + ++IHG V K G E +FV+N+LI+ Y
Sbjct: 141 ACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMY----------------------- 177
Query: 350 WNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLEL 409
G E + AV +LE SWS+++S A G E L L
Sbjct: 178 --------GRCGEMELSSAVFEKLESK---------TAASWSSMVSARAGMGMWSECLLL 220
Query: 410 FRRM-QLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYM 468
FR M +K + L CA ALNLG +HG+ +RN+ + NI+V L++MY+
Sbjct: 221 FRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYV 280
Query: 469 KCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVT 528
KCG K +F +E R+ ++++++ISG +HG G++AL F +MIK G++PDHV +V+
Sbjct: 281 KCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVS 340
Query: 529 ALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIE 588
L+ACSH+GLV GR +F +M++E ++EPT EHY CLVDLLGRAGLL+EA + ++++PIE
Sbjct: 341 VLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIE 400
Query: 589 PNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVR 648
N+ IW L+ CR ++ ++ + A ++L L+S G ++L+SN+Y+ W+D AR R
Sbjct: 401 KNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLISNLYSQGQMWDDVARTR 460
Query: 649 ISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
KGLK+TPG S +E++ K + F + + H E+Y +L ++ Q+ E Y
Sbjct: 461 TEIAIKGLKQTPGFSIVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGY 515
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 181/380 (47%), Gaps = 53/380 (13%)
Query: 50 LLQQCSTLQQARQLHSQTI-LTAAYRKPFLAAKLIALYARFG---SVSHAQKVFNAVPFE 105
LL++C + + +Q+H++ I L+ Y F A+ ++A A G S+++A +F +
Sbjct: 36 LLKRCHNIDEFKQVHARFIKLSLFYSSSFSASSVLAKCAHSGWENSMNYAASIFRGID-- 93
Query: 106 RLDHIPL-WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLC 164
D +N++IR V+ FE A+ Y M + G PD FT P +++AC+ L S
Sbjct: 94 --DPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREG 151
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
+ +H +LG + V N L+ MYG+ G ME + +F+ + +T SW++MVS A
Sbjct: 152 KQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARA-- 209
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
G++ E L LF+ M + + AE
Sbjct: 210 ---------------------------------GMGMWSECLLLFRGMCSE-TNLKAEES 235
Query: 285 AVVISV--CADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDI 342
+V ++ CA+ ++ IHG++++ E + V+ +L+D Y K L A ++F +
Sbjct: 236 GMVSALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKM 295
Query: 343 KNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGC 402
+ +N +++A+IS A G E A + ++ K + L P+ + + +V++ + G
Sbjct: 296 EKRNNLTYSAMISGLALHGEGESALRMFSKMIK-----EGLEPDHVVYVSVLNACSHSGL 350
Query: 403 GEESLELFRRM-QLAKVKPN 421
+E +F M + KV+P
Sbjct: 351 VKEGRRVFAEMLKEGKVEPT 370
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 154/452 (34%), Positives = 253/452 (55%), Gaps = 15/452 (3%)
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREI 303
PN +T+++ G + + L+ M + V+ C ++ REI
Sbjct: 90 PNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREI 145
Query: 304 HGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLC 363
H V+K G+ V +++ Y K L +A +F ++ +++ + +I+ Y+E G
Sbjct: 146 HAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFI 205
Query: 364 EEAHAVLLQLEKSLDGHQPLR-PNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNC 422
+EA L+ Q ++ + + W+A+I G ++LELFR MQ+ V N
Sbjct: 206 KEA----------LELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANE 255
Query: 423 VTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDN 482
T VLS C++L AL LGR +H + M+ + VGN LINMY +CGD + VF
Sbjct: 256 FTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRV 315
Query: 483 IEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAG 542
+ +D+IS+N++ISG MHG A+ F +M+ G +P+ VT V L+ACSH GL+ G
Sbjct: 316 MRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIG 375
Query: 543 RNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCR 602
+F M R F +EP +EHY C+VDLLGR G L+EA + N+PIEP+ + G LL++C+
Sbjct: 376 LEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACK 435
Query: 603 THKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQ 662
H + ++ E+ A ++ + +G+++LLSN+YA++G+W++S +R S + G++K PG
Sbjct: 436 IHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGC 495
Query: 663 SWIEVRKKVYTFSAGNIVHLGLDEVYVILEEL 694
S IEV +++ F G+I H + +Y L+EL
Sbjct: 496 STIEVDNQIHEFLVGDIAHPHKEAIYQRLQEL 527
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/541 (22%), Positives = 231/541 (42%), Gaps = 90/541 (16%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
I++L+ C + +H++ I T + F+ +LI + + SV +A VF+ V
Sbjct: 32 LISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNP- 90
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRI 166
++ L+ ++I VS G + +Y M PD + + +++AC +CR
Sbjct: 91 --NVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCRE 144
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHD 226
+H L+LGF + V K++ +YGK G + +A ++FD MP R ++ M++ Y+
Sbjct: 145 IHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGF 204
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
A +F+ ++++D +V WT+++ R ++ LELF+ M+ +
Sbjct: 205 IKEALELFQDVKIKD----TVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVC 260
Query: 287 VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKN 346
V+S C+D+ ++ R +H +V E FV NALI+ Y + + +A VF +++K+
Sbjct: 261 VLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKD 320
Query: 347 LESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEES 406
+ S+N +I SG A G E+
Sbjct: 321 VISYNTMI----------------------------------------SGLAMHGASVEA 340
Query: 407 LELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNL-MDDNILVGNGLIN 465
+ FR M +PN VT +L+ C+ L++G E+ R ++ I +++
Sbjct: 341 INEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVD 400
Query: 466 MYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVT 525
+ + G ++ + +NI ++PDH+
Sbjct: 401 LLGRVGRLEEAYRFIENIP----------------------------------IEPDHIM 426
Query: 526 FVTALSACSHAGLVAAGRNLFYQMVREFRIE-PTVEHYACLVDLLGRAGLLQEANDIVRN 584
T LSAC G + G + ++ F E P Y L +L +G +E+ +I +
Sbjct: 427 LGTLLSACKIHGNMELGEKIAKRL---FESENPDSGTYVLLSNLYASSGKWKESTEIRES 483
Query: 585 M 585
M
Sbjct: 484 M 484
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 171/556 (30%), Positives = 295/556 (53%), Gaps = 58/556 (10%)
Query: 114 NSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACS-HLGSSSLCRIVHCHAL 172
+++I+ ++S G A+ +Y G+R+ G + G+ +PLI+ AC+ + L +++H ++
Sbjct: 15 SNLIKNHISRGSPIQALVLYGGIRRRGVYFPGW-VPLILRACACVVPRVVLGKLLHSESI 73
Query: 173 ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASR 232
+ G + + V + L+ MYGK G + A ++FD MP R + +WN M+ GY N D V AS
Sbjct: 74 KFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGDAVLASG 133
Query: 233 IFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCA 292
+F+ + + N+VTW ++ + + ++ ELF+ M + A ++
Sbjct: 134 LFEEISV---CRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSV-------- 182
Query: 293 DVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNA 352
++ Y ++ + DA F DI KN W+
Sbjct: 183 -----------------------------MLGVYVNNRKMEDARKFFEDIPEKNAFVWSL 213
Query: 353 LISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRR 412
++S Y G EA A+ ++ +++ W+ +I+G+A G +++++ F
Sbjct: 214 MMSGYFRIGDVHEARAIF---------YRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFN 264
Query: 413 MQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGD 472
MQ +P+ VT S++LS CA+ L++GRE+H ++ N V N LI+MY KCGD
Sbjct: 265 MQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGD 324
Query: 473 FKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSA 532
+ VF++I R + NS+IS +HG G AL F M +KPD +TF+ L+A
Sbjct: 325 LENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTA 384
Query: 533 CSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEY 592
C H G + G +F +M + ++P V+H+ CL+ LLGR+G L+EA +V+ M ++PN+
Sbjct: 385 CVHGGFLMEGLKIFSEMKTQ-DVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDT 443
Query: 593 IWGALLNSCRTHKDTKIVEETASQILTLNSQITGSF-----MLLSNIYAANGRWEDSARV 647
+ GALL +C+ H DT++ E+ I T S IT S+ +SN+YA RW+ + +
Sbjct: 444 VLGALLGACKVHMDTEMAEQVMKIIETAGS-ITNSYSENHLASISNLYAHTERWQTAEAL 502
Query: 648 RISAKKKGLKKTPGQS 663
R+ +K+GL+K+PG S
Sbjct: 503 RVEMEKRGLEKSPGLS 518
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 107/202 (52%), Gaps = 3/202 (1%)
Query: 74 RKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIY 133
+ F+ + +++ Y R G V A+ +F V F R + +WN++I +GY + AI+ +
Sbjct: 206 KNAFVWSLMMSGYFRIGDVHEARAIFYRV-FAR--DLVIWNTLIAGYAQNGYSDDAIDAF 262
Query: 134 VGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKL 193
M+ G+ PD T+ I+ AC+ G + R VH G + V N L+ MY K
Sbjct: 263 FNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKC 322
Query: 194 GRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLL 253
G +E+A +F+ + VR++ N+M+S A + A +F ME D +P+ +T+ ++L
Sbjct: 323 GDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVL 382
Query: 254 SSHKRCGLYDETLELFKLMRTR 275
++ G E L++F M+T+
Sbjct: 383 TACVHGGFLMEGLKIFSEMKTQ 404
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 290 bits (743), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 200/683 (29%), Positives = 330/683 (48%), Gaps = 77/683 (11%)
Query: 51 LQQCSTLQ---QARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERL 107
L+ C +Q + + + I + F+A +I++Y F +S A KVF+ + ER
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMS-ER- 69
Query: 108 DHIPLWNSIIRANVSHGYFEFAIEIYVGM-RKFGFFPDGFTLPLIIEACSHLGSSSLCRI 166
+I W +++ S G AIE+Y M + F +++AC +G L +
Sbjct: 70 -NIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGIL 128
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHD 226
V+ + R + ++N +V MY K GR+ +A F + + SWNT++SGY
Sbjct: 129 VYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGL 188
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
A +F RM +PN V+W L+S G LE M+ G + AL
Sbjct: 189 MDEAVTLFHRMP----QPNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPC 243
Query: 287 VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK--- 343
+ C+ + +++H V+K G E F +ALID Y L A +VF K
Sbjct: 244 GLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAV 303
Query: 344 NKNLESWNALISSYA----------------ESGLCEEAH-------------------- 367
N ++ WN+++S + +S LC +++
Sbjct: 304 NSSVAVWNSMLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQ 363
Query: 368 -----------------AVLLQLEKSL----DGHQPLR--PN--VISWSAVISGFASKGC 402
++L+ L ++ D H+ PN +I++S +I G G
Sbjct: 364 VHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGF 423
Query: 403 GEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNG 462
+ LFR + + + S +L VC+ LA+L G+++HG ++ + +
Sbjct: 424 NSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATA 483
Query: 463 LINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPD 522
L++MY+KCG+ G ++FD + RD++SW +I G+G +G + A F +MI G++P+
Sbjct: 484 LVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPN 543
Query: 523 HVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIV 582
VTF+ LSAC H+GL+ R+ M E+ +EP +EHY C+VDLLG+AGL QEAN+++
Sbjct: 544 KVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELI 603
Query: 583 RNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWE 642
MP+EP++ IW +LL +C THK+ +V A ++L + LSN YA G W+
Sbjct: 604 NKMPLEPDKTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWD 663
Query: 643 DSARVRISAKKKGLKKTPGQSWI 665
++VR +AKK G K++ G SWI
Sbjct: 664 QLSKVREAAKKLGAKES-GMSWI 685
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 198/664 (29%), Positives = 335/664 (50%), Gaps = 68/664 (10%)
Query: 48 ITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNA----VP 103
+ LL+ C++ Q +Q+ +Q + F ++LI F ++++ + + A +
Sbjct: 38 LVLLENCNSRNQFKQVLAQIMRFNLICDTFPMSRLIF----FSAITYPENLDLAKLLFLN 93
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
F ++ ++N++I A S F + Y M + PD T +++A S L S
Sbjct: 94 FTPNPNVFVYNTMISAVSSSKNECFGL--YSSMIRHRVSPDRQTFLYLMKASSFL---SE 148
Query: 164 CRIVHCHALE---LGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSG 220
+ +HCH + L N+L N LV Y +LG A ++F MP + S+N M+ G
Sbjct: 149 VKQIHCHIIVSGCLSLGNYLW--NSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVG 206
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEIS 280
+ + G E L+L+ M + G E
Sbjct: 207 -----------------------------------YAKQGFSLEALKLYFKMVSDGIEPD 231
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGG--YEDYLFVKNALIDTYRKHKHLGDAHNV 338
+ ++ C + ++ + +HG++ + G Y L + NAL+D Y K K G A
Sbjct: 232 EYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRA 291
Query: 339 FFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFA 398
F +K K++ SWN ++ + G E A AV Q+ K +++SW++++ G++
Sbjct: 292 FDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKR---------DLVSWNSLLFGYS 342
Query: 399 SKGCGEESL-ELFRRMQLA-KVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDN 456
KGC + ++ ELF M + KVKP+ VT +++S A L+ GR +HG +R + +
Sbjct: 343 KKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGD 402
Query: 457 ILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIK 516
+ + LI+MY KCG ++ +VF +D+ W S+I+G HG G AL F M +
Sbjct: 403 AFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFGRMQE 462
Query: 517 AGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQ 576
G+ P++VT + L+ACSH+GLV G ++F M +F +P EHY LVDLL RAG ++
Sbjct: 463 EGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVE 522
Query: 577 EANDIV-RNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIY 635
EA DIV + MP+ P++ +WG++L++CR +D + E +++L L + G ++LLSNIY
Sbjct: 523 EAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLLSNIY 582
Query: 636 AANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIV-HLGLDEVYVILEEL 694
A GRW S + R + + +G+KKT G S + + ++ F A H E+ IL+ L
Sbjct: 583 ATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTEIKRILQHL 642
Query: 695 ALQM 698
+M
Sbjct: 643 YNEM 646
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 168/392 (42%), Gaps = 52/392 (13%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYR-KPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
F+ L++ S L + +Q+H I++ +L L+ Y G+ A+KVF +P
Sbjct: 136 FLYLMKASSFLSEVKQIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHP 195
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCR 165
+ +N +I G+ A+++Y M G PD +T+ ++ C HL L +
Sbjct: 196 ---DVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGK 252
Query: 166 IVHCHALELG--FRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
VH G + ++L + N L+ MY K A + FD M + + SWNTMV G+
Sbjct: 253 GVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVR 312
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETL-ELFKLMR-TRGCEISA 281
D A +F +M D V+W SLL + + G T+ ELF M +
Sbjct: 313 LGDMEAAQAVFDQMPKRDL----VSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDR 368
Query: 282 EALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFD 341
+ +IS A+ E+ R +HG VI+ + F+ +ALID Y K + A VF
Sbjct: 369 VTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKT 428
Query: 342 IKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKG 401
K++ W ++ I+G A G
Sbjct: 429 ATEKDVALWTSM----------------------------------------ITGLAFHG 448
Query: 402 CGEESLELFRRMQLAKVKPNCVTFSTVLSVCA 433
G+++L+LF RMQ V PN VT VL+ C+
Sbjct: 449 NGQQALQLFGRMQEEGVTPNNVTLLAVLTACS 480
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 179/571 (31%), Positives = 288/571 (50%), Gaps = 77/571 (13%)
Query: 136 MRKFGFFPDGFTLPLI---IEACSHLGSSSL-CR--IVHCHALELGFRNHLHVVNKLVGM 189
M+K P F L I +E G L CR ++H H + G + KLV
Sbjct: 1 MKKLTIVPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTF 60
Query: 190 YGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTW 249
Y + G++ DA ++FD MP R I M+ A
Sbjct: 61 YVECGKVLDARKVFDEMPKRDISGCVVMIGACA--------------------------- 93
Query: 250 TSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIK 309
R G Y E+L+ F+ M G ++ A + ++ ++++ + + IH V+K
Sbjct: 94 --------RNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLK 145
Query: 310 GGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAV 369
YE F+ ++LID Y K +G+A VF D+ ++L +NA+IS YA + +EA +
Sbjct: 146 FSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNL 205
Query: 370 LLQLE---------------------------------KSLDGHQPLRPNVISWSAVISG 396
+ ++ LDG+ +P+V+SW+++ISG
Sbjct: 206 VKDMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGY---KPDVVSWTSIISG 262
Query: 397 FASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDN 456
E++ + F++M + PN T T+L C LA + G+E+HGY+V ++D+
Sbjct: 263 LVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDH 322
Query: 457 ILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIK 516
V + L++MY KCG + ++F + +++NS+I Y HGL D A+ FD+M
Sbjct: 323 GFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEA 382
Query: 517 AGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQ 576
G K DH+TF L+ACSHAGL G+NLF M ++RI P +EHYAC+VDLLGRAG L
Sbjct: 383 TGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRAGKLV 442
Query: 577 EANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYA 636
EA ++++ M +EP+ ++WGALL +CR H + ++ A + L + +G+ +LL+++YA
Sbjct: 443 EAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAKHLAELEPENSGNGLLLTSLYA 502
Query: 637 ANGRWEDSARVRISAKKKGLKKTPGQSWIEV 667
G WE R++ KKK ++ G SW+E
Sbjct: 503 NAGSWESVVRMKKMIKKKRFRRFLGSSWVET 533
Score = 149 bits (376), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 189/391 (48%), Gaps = 43/391 (10%)
Query: 59 QARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIR 118
+ R LH+ + + R +AAKL+ Y G V A+KVF+ +P + + +I
Sbjct: 34 RGRVLHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVV---MIG 90
Query: 119 ANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRN 178
A +GY++ +++ + M K G D F +P +++A +L +++HC L+ + +
Sbjct: 91 ACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYES 150
Query: 179 HLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRME 238
+V+ L+ MY K G + +A ++F + + ++ +N M+SGYA N A + K M+
Sbjct: 151 DAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMK 210
Query: 239 LEDWRPNSVTWTSLLS--SHKR----------------------------CGLY-----D 263
L +P+ +TW +L+S SH R GL +
Sbjct: 211 LLGIKPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNE 270
Query: 264 ETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALI 323
+ + FK M T G ++ + ++ C + + +EIHGY + G ED+ FV++AL+
Sbjct: 271 KAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALL 330
Query: 324 DTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPL 383
D Y K + +A +F K ++N++I YA GL ++A + Q+E + +
Sbjct: 331 DMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGE----- 385
Query: 384 RPNVISWSAVISGFASKGCGEESLELFRRMQ 414
+ + ++++A+++ + G + LF MQ
Sbjct: 386 KLDHLTFTAILTACSHAGLTDLGQNLFLLMQ 416
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 84 ALYARFGSVSHAQKVFNAVPFERLD----HIPLWNSIIRANVSHGYFEFAIEIYVGMRKF 139
AL + F + + +KV + LD + W SII V + E A + + M
Sbjct: 223 ALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTH 282
Query: 140 GFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDA 199
G +P+ T+ ++ AC+ L + +H +++ G +H V + L+ MYGK G + +A
Sbjct: 283 GLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEA 342
Query: 200 CQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRC 259
LF P +T +++N+M+ YA + A +F +ME + + +T+T++L++
Sbjct: 343 MILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHA 402
Query: 260 GLYDETLELFKLMRTR 275
GL D LF LM+ +
Sbjct: 403 GLTDLGQNLFLLMQNK 418
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 290 bits (741), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 183/625 (29%), Positives = 300/625 (48%), Gaps = 85/625 (13%)
Query: 47 FITLLQQCSTLQQ---ARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F L+ C+ LQ +++H Q + ++ L L+ +YA+ G + A KVFN +
Sbjct: 145 FSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVLTG-LLDMYAKCGEIKSAHKVFNDIT 203
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
L ++ W S+I V + E + ++ MR+ + +T +I AC+ L +
Sbjct: 204 ---LRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQ 260
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
+ H ++ G +V L+ MY K G + +A ++F+
Sbjct: 261 GKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFN------------------- 301
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
E + V WT+++ + G +E L LF+ M+ + +
Sbjct: 302 ----------------EHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCVT 345
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
+A V+S C + ++ R +HG IK G D V NAL+ Y K DA VF
Sbjct: 346 IASVLSGCGLIENLELGRSVHGLSIKVGIWD-TNVANALVHMYAKCYQNRDAKYVF---- 400
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
++E D +++W+++ISGF+ G
Sbjct: 401 ----------------------------EMESEKD--------IVAWNSIISGFSQNGSI 424
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVR--NLMDDNILVGN 461
E+L LF RM V PN VT +++ S CA L +L +G LH Y+V+ L ++ VG
Sbjct: 425 HEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGT 484
Query: 462 GLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKP 521
L++ Y KCGD + L+FD IE ++ I+W+++I GYG G +L F+EM+K KP
Sbjct: 485 ALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKP 544
Query: 522 DHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI 581
+ TF + LSAC H G+V G+ F M +++ P+ +HY C+VD+L RAG L++A DI
Sbjct: 545 NESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLARAGELEQALDI 604
Query: 582 VRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRW 641
+ MPI+P+ +GA L+ C H + E ++L L+ ++L+SN+YA++GRW
Sbjct: 605 IEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDDASYYVLVSNLYASDGRW 664
Query: 642 EDSARVRISAKKKGLKKTPGQSWIE 666
+ VR K++GL K G S +E
Sbjct: 665 NQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 136/560 (24%), Positives = 236/560 (42%), Gaps = 84/560 (15%)
Query: 50 LLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDH 109
LL +C+ + RQ H +A KL++LY FG A+ VF+ +P
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDF-- 107
Query: 110 IPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHC 169
LW ++R + +++Y + K GF D ++AC+ L + +HC
Sbjct: 108 -YLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 170 HALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVG 229
+++ +++ V+ L+ MY K G ++ A ++F+ + +R
Sbjct: 167 QLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLR-------------------- 205
Query: 230 ASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVIS 289
N V WTS+++ + + L +E L LF MR + +I
Sbjct: 206 ---------------NVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIM 250
Query: 290 VCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLES 349
C + + + + HG ++K G E + +L+D Y K + +A VF + + +L
Sbjct: 251 ACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVM 310
Query: 350 WNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLEL 409
W A+I Y +G EA L L + + G + ++PN ++ ++V+SG
Sbjct: 311 WTAMIVGYTHNGSVNEA----LSLFQKMKGVE-IKPNCVTIASVLSG------------- 352
Query: 410 FRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVR-NLMDDNILVGNGLINMYM 468
C + L LGR +HG +++ + D N V N L++MY
Sbjct: 353 ----------------------CGLIENLELGRSVHGLSIKVGIWDTN--VANALVHMYA 388
Query: 469 KCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVT 528
KC + VF+ +D+++WNS+ISG+ +G AL F M + P+ VT +
Sbjct: 389 KCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVAS 448
Query: 529 ALSACSHAGLVAAGRNLF-YQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPI 587
SAC+ G +A G +L Y + F +V L+D + G Q A I +
Sbjct: 449 LFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIE- 507
Query: 588 EPNEYIWGALLNSCRTHKDT 607
E N W A++ DT
Sbjct: 508 EKNTITWSAMIGGYGKQGDT 527
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 289 bits (740), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 169/553 (30%), Positives = 278/553 (50%), Gaps = 77/553 (13%)
Query: 151 IIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRT 210
+I A S LCR++HC ++ H + ++LVG Y +LG A +LFD MP R
Sbjct: 37 LIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERD 96
Query: 211 ILSWNTMVSGYAFNHDCVGASRIFKRMELED--WRPNSVTWTSLLSSHKRCGLYDETLEL 268
++SWN+++SGY+ + RM + + +RPN VT+ S+
Sbjct: 97 LVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSM---------------- 140
Query: 269 FKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRK 328
IS C + R IHG V+K G + + V NA I+ Y K
Sbjct: 141 -------------------ISACVYGGSKEEGRCIHGLVMKFGVLEEVKVVNAFINWYGK 181
Query: 329 HKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVI 388
L + +F D+ KNL +
Sbjct: 182 TGDLTSSCKLFEDLSIKNL----------------------------------------V 201
Query: 389 SWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYA 448
SW+ +I G E+ L F + +P+ TF VL C ++ + L + +HG
Sbjct: 202 SWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLI 261
Query: 449 VRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNAL 508
+ N + L+++Y K G + VF I D ++W ++++ Y HG G +A+
Sbjct: 262 MFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAI 321
Query: 509 TTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDL 568
F+ M+ G+ PDHVTF L+ACSH+GLV G++ F M + +RI+P ++HY+C+VDL
Sbjct: 322 KHFELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDL 381
Query: 569 LGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSF 628
LGR+GLLQ+A +++ MP+EP+ +WGALL +CR +KDT++ + A ++ L + ++
Sbjct: 382 LGRSGLLQDAYGLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNY 441
Query: 629 MLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVY 688
++LSNIY+A+G W+D++R+R K+KGL + G S+IE K++ F G+ H +++
Sbjct: 442 VMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKIQ 501
Query: 689 VILEELALQMANE 701
L+E+ +M +E
Sbjct: 502 KKLKEIRKKMKSE 514
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 176/388 (45%), Gaps = 46/388 (11%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
I ++ C +++ R LH + + + +YR F+ +L+ Y R G A+K+F+ +P ER
Sbjct: 37 LIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMP-ER 95
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGM--RKFGFFPDGFTLPLIIEACSHLGSSSLC 164
+ WNS+I GY E+ M + GF P+ T +I AC + GS
Sbjct: 96 --DLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEG 153
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
R +H ++ G + VVN + YGK G + +C+LF+ + ++ ++SWNTM+
Sbjct: 154 RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMI------ 207
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
H + GL ++ L F + R G E
Sbjct: 208 -----------------------------VIHLQNGLAEKGLAYFNMSRRVGHEPDQATF 238
Query: 285 AVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN 344
V+ C D+ V ++ IHG ++ GG+ + AL+D Y K L D+ VF +I +
Sbjct: 239 LAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITS 298
Query: 345 KNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGE 404
+ +W A++++YA G +A + E L H + P+ ++++ +++ + G E
Sbjct: 299 PDSMAWTAMLAAYATHGFGRDA---IKHFE--LMVHYGISPDHVTFTHLLNACSHSGLVE 353
Query: 405 ESLELFRRM-QLAKVKPNCVTFSTVLSV 431
E F M + ++ P +S ++ +
Sbjct: 354 EGKHYFETMSKRYRIDPRLDHYSCMVDL 381
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 123/282 (43%), Gaps = 47/282 (16%)
Query: 409 LFRRMQLAK---VKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLIN 465
L+RR L++ V S++++ ++ L R LH V+++ + +G+ L+
Sbjct: 15 LYRRRFLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLVG 74
Query: 466 MYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMI--KAGMKPDH 523
Y++ G +FD + RDL+SWNSLISGY G M+ + G +P+
Sbjct: 75 CYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNE 134
Query: 524 VTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVR 583
VTF++ +SAC + G GR + + +V +F + V+ ++ G+ G L + +
Sbjct: 135 VTFLSMISACVYGGSKEEGRCI-HGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFE 193
Query: 584 NMPI----------------------------------EPNEYIWGALLNSCRTHKDTKI 609
++ I EP++ + A+L SC ++
Sbjct: 194 DLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHEPDQATFLAVLRSCEDMGVVRL 253
Query: 610 VEETASQIL----TLNSQITGSFMLLSNIYAANGRWEDSARV 647
+ I+ + N IT + + ++Y+ GR EDS+ V
Sbjct: 254 AQGIHGLIMFGGFSGNKCITTALL---DLYSKLGRLEDSSTV 292
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 289 bits (740), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 193/663 (29%), Positives = 317/663 (47%), Gaps = 91/663 (13%)
Query: 49 TLLQQCSTLQQA---RQLHSQTILTAAYRKPFLAAKLIALYARFG-SVSHAQKVFNAV-- 102
++L CS + + H + T + F+ L+++YA+ G V + +VF ++
Sbjct: 143 SVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQ 202
Query: 103 PFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLII------EACS 156
P E + + + + R N E A++++ M + G D L I+ E C
Sbjct: 203 PNE-VSYTAVIGGLAREN---KVLE-AVQMFRLMCEKGVQVDSVCLSNILSISAPREGCD 257
Query: 157 HLG---SSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILS 213
L + L + +HC AL LGF LH+ N L+ +Y K M A +F MP ++S
Sbjct: 258 SLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVS 317
Query: 214 WNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVT------------------------- 248
WN M+ G+ + + RM ++PN VT
Sbjct: 318 WNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIP 377
Query: 249 ------WTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSRE 302
W ++LS + Y+E + F+ M+ + + L+V++S CA + ++ ++
Sbjct: 378 QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQ 437
Query: 303 IHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGL 362
IHG VI+ + + LI Y + + + + +F D N+
Sbjct: 438 IHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINE----------------- 480
Query: 363 CEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM-QLAKVKPN 421
LD + W+++ISGF ++L LFRRM Q A + PN
Sbjct: 481 --------------LD--------IACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPN 518
Query: 422 CVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFD 481
+F+TVLS C+ L +L GR+ HG V++ + V L +MY KCG+ FD
Sbjct: 519 ETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFD 578
Query: 482 NIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAA 541
+ ++ + WN +I GYG +G GD A+ + +MI +G KPD +TFV+ L+ACSH+GLV
Sbjct: 579 AVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGLVET 638
Query: 542 GRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSC 601
G + M R IEP ++HY C+VD LGRAG L++A + P + + +W LL+SC
Sbjct: 639 GLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDAEKLAEATPYKSSSVLWEILLSSC 698
Query: 602 RTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPG 661
R H D + A +++ L+ Q + +++LLSN Y++ +W+DSA ++ K + KTPG
Sbjct: 699 RVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPG 758
Query: 662 QSW 664
QSW
Sbjct: 759 QSW 761
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 144/592 (24%), Positives = 268/592 (45%), Gaps = 84/592 (14%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
+ L +C AR++ + + R + + + G + A +VF+ +P ER
Sbjct: 47 LLDLYIECGDGDYARKVFDEM----SVRDVYSWNAFLTFRCKVGDLGEACEVFDGMP-ER 101
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRI 166
+ WN++I V G+ E A+ +Y M GF P FTL ++ ACS +
Sbjct: 102 --DVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMR 159
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHD 226
H A++ G ++ V N L+ MY K G + D
Sbjct: 160 CHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDY--------------------------- 192
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
R+F+ + +PN V++T+++ R E +++F+LM +G ++ + L+
Sbjct: 193 ---GVRVFESLS----QPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSN 245
Query: 287 VISV------CADVVEV---DRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHN 337
++S+ C + E+ + ++IH ++ G+ L + N+L++ Y K+K + A
Sbjct: 246 ILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAEL 305
Query: 338 VFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQP--------------- 382
+F ++ N+ SWN +I + + +++ L ++ S G QP
Sbjct: 306 IFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDS--GFQPNEVTCISVLGACFRS 363
Query: 383 -------------LRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVL 429
+P+V +W+A++SG+++ EE++ FR+MQ +KP+ T S +L
Sbjct: 364 GDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVIL 423
Query: 430 SVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDN-IEGRDL 488
S CA L L G+++HG +R + N + +GLI +Y +C + +FD+ I D+
Sbjct: 424 SSCARLRFLEGGKQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDI 483
Query: 489 ISWNSLISGYGMHGLGDNALTTFDEMIK-AGMKPDHVTFVTALSACSHAGLVAAGRNLFY 547
WNS+ISG+ + L AL F M + A + P+ +F T LS+CS + GR
Sbjct: 484 ACWNSMISGFRHNMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHG 543
Query: 548 QMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLN 599
+V+ + + A L D+ + G + A + + N IW +++
Sbjct: 544 LVVKSGYVSDSFVETA-LTDMYCKCGEIDSARQFF-DAVLRKNTVIWNEMIH 593
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 111/442 (25%), Positives = 198/442 (44%), Gaps = 46/442 (10%)
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
+++H + +G ++ ++ N+L+ +Y + G + A ++FD M VR + SWN ++
Sbjct: 26 KVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKV 85
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
D A +F M D V+W +++S R G ++ L ++K M G S L
Sbjct: 86 GDLGEACEVFDGMPERD----VVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTL 141
Query: 285 AVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGD-AHNVFFDIK 343
A V+S C+ V++ HG +K G + +FV NAL+ Y K + D VF +
Sbjct: 142 ASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLS 201
Query: 344 NKNLESWNALISSYA-ESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGC 402
N S+ A+I A E+ + E L EK + N++S SA +GC
Sbjct: 202 QPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISA-----PREGC 256
Query: 403 GEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNG 462
+SL +E+ LG+++H A+R ++ + N
Sbjct: 257 --DSL-------------------------SEIYGNELGKQIHCLALRLGFGGDLHLNNS 289
Query: 463 LINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPD 522
L+ +Y K D L+F + +++SWN +I G+G D ++ M +G +P+
Sbjct: 290 LLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPN 349
Query: 523 HVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIV 582
VT ++ L AC +G V GR +F + +P+V + ++ +EA
Sbjct: 350 EVTCISVLGACFRSGDVETGRRIFSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISNF 404
Query: 583 RNMP---IEPNEYIWGALLNSC 601
R M ++P++ +L+SC
Sbjct: 405 RQMQFQNLKPDKTTLSVILSSC 426
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 25/242 (10%)
Query: 44 EDFFITLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFN 100
E F T+L CS +L RQ H + + F+ L +Y + G + A++ F+
Sbjct: 519 ETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVETALTDMYCKCGEIDSARQFFD 578
Query: 101 AVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGS 160
AV + + +WN +I +G + A+ +Y M G PDG T ++ ACSH G
Sbjct: 579 AVLRK---NTVIWNEMIHGYGHNGRGDEAVGLYRKMISSGEKPDGITFVSVLTACSHSGL 635
Query: 161 --------SSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR-TI 211
SS+ RI H +E +++ +V+ L G+ GR+EDA +L + P + +
Sbjct: 636 VETGLEILSSMQRI---HGIEPELDHYICIVDCL----GRAGRLEDAEKLAEATPYKSSS 688
Query: 212 LSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLS-SHKRCGLYDETLELFK 270
+ W ++S + D A R+ +++ D P S LLS ++ +D++ L
Sbjct: 689 VLWEILLSSCRVHGDVSLARRVAEKLMRLD--PQSSAAYVLLSNTYSSLRQWDDSAALQG 746
Query: 271 LM 272
LM
Sbjct: 747 LM 748
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 31/125 (24%)
Query: 441 GRELHGYAVRNLMDDNILVGNGLINMYMKCGD--------------------------FK 474
G+ +HG+ VR M + + N L+++Y++CGD K
Sbjct: 25 GKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCK 84
Query: 475 KGHL-----VFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTA 529
G L VFD + RD++SWN++IS G + AL + M+ G P T +
Sbjct: 85 VGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASV 144
Query: 530 LSACS 534
LSACS
Sbjct: 145 LSACS 149
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 288 bits (737), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 192/670 (28%), Positives = 325/670 (48%), Gaps = 54/670 (8%)
Query: 47 FITLLQQC---STLQQARQLHSQTILTAAYRKPFLAAKLIALYAR--FGSVSHAQKVFNA 101
F+ +L C S Q+H + + F++ L++LY + S K+F+
Sbjct: 184 FVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDE 243
Query: 102 VPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKF-GFFPDGFTLPLIIEACSHLGS 160
+P +R + WN+++ + V G A +++ M + GF D FTL ++ +C+
Sbjct: 244 IP-QR--DVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSV 300
Query: 161 SSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSG 220
R +H A+ +G L V N L+G Y K M+ L++ M + +++ M++
Sbjct: 301 LLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITA 360
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEIS 280
Y A IF + N++T+ +L++ R G + L+LF M RG E++
Sbjct: 361 YMSFGMVDSAVEIFANVT----EKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELT 416
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFF 340
+L + C V E S +IHG+ IK G ++ AL+D + + + DA +F
Sbjct: 417 DFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMF- 475
Query: 341 DIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASK 400
D NL+S A S +I G+A
Sbjct: 476 DQWPSNLDSSKATTS-------------------------------------IIGGYARN 498
Query: 401 GCGEESLELFRR-MQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILV 459
G ++++ LF R + K+ + V+ + +L+VC L +G ++H YA++ +I +
Sbjct: 499 GLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISL 558
Query: 460 GNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGM 519
GN LI+MY KC D +F+ + D+ISWNSLIS Y + GD AL + M + +
Sbjct: 559 GNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMNEKEI 618
Query: 520 KPDHVTFVTALSAC--SHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQE 577
KPD +T +SA + + +++ R+LF M + IEPT EHY V +LG GLL+E
Sbjct: 619 KPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWGLLEE 678
Query: 578 ANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAA 637
A D + +MP++P + ALL+SCR H +T + + A IL+ + ++L SNIY+A
Sbjct: 679 AEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSNIYSA 738
Query: 638 NGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQ 697
+G W S +R +++G +K P +SWI K+++F A + H ++Y LE L ++
Sbjct: 739 SGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEILIME 798
Query: 698 MANENYELNS 707
YE N+
Sbjct: 799 CLKVGYEPNT 808
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 117/513 (22%), Positives = 222/513 (43%), Gaps = 63/513 (12%)
Query: 46 FFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
+ + L Q ++ + +H+ + L K L LI+ Y + G A VF ++
Sbjct: 85 YLLRLSAQYHDVEVTKAVHA-SFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSSP 143
Query: 106 RL-DHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFF-PDGFTLPLIIEACSHLGSSSL 163
+ + L + R N+ A++++ MRK G P+ +T I+ AC + SL
Sbjct: 144 TVVSYTALISGFSRLNLEIE----ALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSL 199
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLG--RMEDACQLFDGMPVRTILSWNTMVSGY 221
+H ++ GF N + V N L+ +Y K +D +LFD +P R + SWNT+VS
Sbjct: 200 GIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSL 259
Query: 222 AFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISA 281
SHK L+ +++ R G + +
Sbjct: 260 VKEG----------------------------KSHKAFDLF------YEMNRVEGFGVDS 285
Query: 282 EALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFD 341
L+ ++S C D + R RE+HG I+ G L V NALI Y K + +++
Sbjct: 286 FTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEM 345
Query: 342 IKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKG 401
+ ++ ++ +I++Y G+ + A + + + N I+++A+++GF G
Sbjct: 346 MMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEK---------NTITYNALMAGFCRNG 396
Query: 402 CGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGN 461
G ++L+LF M V+ + ++ + C ++ + ++HG+ ++ N +
Sbjct: 397 HGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQT 456
Query: 462 GLINMYMKCGDFKKGHLVFD----NIEGRDLISWNSLISGYGMHGLGDNALTTFDEMI-K 516
L++M +C +FD N++ + S+I GY +GL D A++ F + +
Sbjct: 457 ALLDMCTRCERMADAEEMFDQWPSNLDSSK--ATTSIIGGYARNGLPDKAVSLFHRTLCE 514
Query: 517 AGMKPDHVTFVTALSACSHAGLVAAGRNLFYQM 549
+ D V+ L+ C G R + YQ+
Sbjct: 515 QKLFLDEVSLTLILAVCGTLGF----REMGYQI 543
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 116/223 (52%), Gaps = 19/223 (8%)
Query: 336 HNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVIS 395
H F ++ + NALIS+Y + G EA V + L P V+S++A+IS
Sbjct: 103 HASFLKLREEKTRLGNALISTYLKLGFPREAILVFVSLSS---------PTVVSYTALIS 153
Query: 396 GFASKGCGEESLELFRRMQLAK-VKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMD 454
GF+ E+L++F RM+ A V+PN TF +L+ C ++ +LG ++HG V++
Sbjct: 154 GFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFL 213
Query: 455 DNILVGNGLINMYMK-----CGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALT 509
+++ V N L+++Y K C D K +FD I RD+ SWN+++S G A
Sbjct: 214 NSVFVSNSLMSLYDKDSGSSCDDVLK---LFDEIPQRDVASWNTVVSSLVKEGKSHKAFD 270
Query: 510 TFDEMIKA-GMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVR 551
F EM + G D T T LS+C+ + ++ GR L + +R
Sbjct: 271 LFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIR 313
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 425 FSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIE 484
F +L + A+ + + + +H ++ L ++ +GN LI+ Y+K G ++ LVF ++
Sbjct: 83 FFYLLRLSAQYHDVEVTKAVHASFLK-LREEKTRLGNALISTYLKLGFPREAILVFVSLS 141
Query: 485 GRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGM-KPDHVTFVTALSACSHAGLVAAG 542
++S+ +LISG+ L AL F M KAG+ +P+ TFV L+AC + G
Sbjct: 142 SPTVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLG 200
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 288 bits (737), Expect = 9e-78, Method: Compositional matrix adjust.
Identities = 185/661 (27%), Positives = 320/661 (48%), Gaps = 83/661 (12%)
Query: 47 FITLLQ---QCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
FI +L + +L +Q+H + ++ LI +Y + A+ VF+ +
Sbjct: 318 FILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMS 377
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSS-S 162
ER D I WNS+I +G A+ +++ + + G PD +T+ +++A S L S
Sbjct: 378 -ER-DLIS-WNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLS 434
Query: 163 LCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYA 222
L + VH HA+++ + V L+ Y + M++A LF+ +++WN M++GY
Sbjct: 435 LSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWNAMMAGYT 493
Query: 223 FNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAE 282
+HD HK TL+LF LM +G
Sbjct: 494 QSHD----------------------------GHK-------TLKLFALMHKQGERSDDF 518
Query: 283 ALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDI 342
LA V C + +++ +++H Y IK GY+ L+V + ++D Y K + A F I
Sbjct: 519 TLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI 578
Query: 343 KNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGC 402
P+ P+ ++W+ +ISG G
Sbjct: 579 ---------------------------------------PV-PDDVAWTTMISGCIENGE 598
Query: 403 GEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNG 462
E + +F +M+L V P+ T +T+ + L AL GR++H A++ ++ VG
Sbjct: 599 EERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTS 658
Query: 463 LINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPD 522
L++MY KCG + +F IE ++ +WN+++ G HG G L F +M G+KPD
Sbjct: 659 LVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPD 718
Query: 523 HVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIV 582
VTF+ LSACSH+GLV+ M ++ I+P +EHY+CL D LGRAGL+++A +++
Sbjct: 719 KVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGLVKQAENLI 778
Query: 583 RNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWE 642
+M +E + ++ LL +CR DT+ + A+++L L + +++LLSN+YAA +W+
Sbjct: 779 ESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWD 838
Query: 643 DSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANEN 702
+ R K +KK PG SWIEV+ K++ F + + + +Y ++++ + E
Sbjct: 839 EMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEG 898
Query: 703 Y 703
Y
Sbjct: 899 Y 899
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 126/499 (25%), Positives = 221/499 (44%), Gaps = 81/499 (16%)
Query: 124 GYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVV 183
G + ++ + M + D T L++ + S +L + VHC AL+LG L V
Sbjct: 294 GQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVS 353
Query: 184 NKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWR 243
N L+ MY KL + A +FD M R ++SWN++++G A N V A +F ++ +
Sbjct: 354 NSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLK 413
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREI 303
P+ T TS+L +A +L +S+ S+++
Sbjct: 414 PDQYTMTSVLK-------------------------AASSLPEGLSL---------SKQV 439
Query: 304 HGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLC 363
H + IK FV ALID Y +++ + +A + F+ N +L +WNA+++ Y +S
Sbjct: 440 HVHAIKINNVSDSFVSTALIDAYSRNRCMKEAE-ILFERHNFDLVAWNAMMAGYTQSH-- 496
Query: 364 EEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCV 423
DGH+ +L+LF M + +
Sbjct: 497 --------------DGHK------------------------TLKLFALMHKQGERSDDF 518
Query: 424 TFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNI 483
T +TV C L A+N G+++H YA+++ D ++ V +G+++MY+KCGD FD+I
Sbjct: 519 TLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSI 578
Query: 484 EGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGR 543
D ++W ++ISG +G + A F +M G+ PD T T A S + GR
Sbjct: 579 PVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGR 638
Query: 544 NLFYQMVREFRIEPTVEHY--ACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSC 601
+ ++ T + + LVD+ + G + +A + + + + N W A+L
Sbjct: 639 QIH---ANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEM-MNITAWNAMLVGL 694
Query: 602 RTHKDTKIVEETASQILTL 620
H + K + Q+ +L
Sbjct: 695 AQHGEGKETLQLFKQMKSL 713
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 134/596 (22%), Positives = 248/596 (41%), Gaps = 104/596 (17%)
Query: 55 STLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWN 114
S L + H++ + + FL LI++Y++ GS+++A++VF+ +P L WN
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVS---WN 109
Query: 115 SIIRA----------NVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLC 164
SI+ A N+ + F I +R+ + TL +++ C H G
Sbjct: 110 SILAAYAQSSECVVENIQQAFLLFRI-----LRQDVVYTSRMTLSPMLKLCLHSGYVWAS 164
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGY--- 221
H +A ++G V LV +Y K G++++ LF+ MP R ++ WN M+ Y
Sbjct: 165 ESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEM 224
Query: 222 AFNHDCVGASRIFKRMELEDWRPNSVTWTSL----------------------------- 252
F + + S F L PN +T L
Sbjct: 225 GFKEEAIDLSSAFHSSGLN---PNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEII 281
Query: 253 -----LSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYV 307
LS + G Y L+ F M E ++++ V + +++H
Sbjct: 282 FRNKGLSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMA 341
Query: 308 IKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAH 367
+K G + L V N+LI+ Y K + G A VF ++ ++L SWN++I+ A++GL EA
Sbjct: 342 LKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAV 401
Query: 368 AVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFST 427
+ +QL + CG +KP+ T ++
Sbjct: 402 CLFMQLLR--------------------------CG--------------LKPDQYTMTS 421
Query: 428 VLSVCAELA-ALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGR 486
VL + L L+L +++H +A++ + V LI+ Y + K+ ++F+
Sbjct: 422 VLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNF 480
Query: 487 DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLF 546
DL++WN++++GY G L F M K G + D T T C + G+ +
Sbjct: 481 DLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVH 540
Query: 547 -YQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSC 601
Y + + ++ V + ++D+ + G + A ++P+ P++ W +++ C
Sbjct: 541 AYAIKSGYDLDLWVS--SGILDMYVKCGDMSAAQFAFDSIPV-PDDVAWTTMISGC 593
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 122/235 (51%), Gaps = 10/235 (4%)
Query: 44 EDFFI-TLLQQCSTL---QQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVF 99
+DF + T+ + C L Q +Q+H+ I + ++++ ++ +Y + G +S AQ F
Sbjct: 516 DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAF 575
Query: 100 NAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLG 159
+++P D + W ++I + +G E A ++ MR G PD FT+ + +A S L
Sbjct: 576 DSIPVP--DDVA-WTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLT 632
Query: 160 SSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVS 219
+ R +H +AL+L N V LV MY K G ++DA LF + + I +WN M+
Sbjct: 633 ALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLV 692
Query: 220 GYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRT 274
G A + + ++FK+M+ +P+ VT+ +LS+ GL E +K MR+
Sbjct: 693 GLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEA---YKHMRS 744
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 186/588 (31%), Positives = 290/588 (49%), Gaps = 73/588 (12%)
Query: 143 PDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQL 202
P+ FT P ++++C+ LG RI+H ++ GF + LV MY K+ ++ DA ++
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 203 FDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVT-------------- 248
D MP R I S N VSG N C A R+F + NSVT
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEGG 148
Query: 249 ------------------WTSLLSSHKRCG------------------------------ 260
TSL+S + RCG
Sbjct: 149 MQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMEN 208
Query: 261 -LYDETLELFKLMRTRGCEISAEALAV-VISVCADVVEVDRSREIHGYVIKGGYEDYLFV 318
+ + +F LMR E + V I+ CA ++ + R++HG V+K ++ V
Sbjct: 209 GVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMV 268
Query: 319 KNALIDTYRKHKHLGDAHNVFFDIKN-KNLESWNALISSYAESGLCEEAHAVLLQLEKSL 377
ALID Y K + A+ VF ++K+ +NL SWN++IS +G H ++L + L
Sbjct: 269 GTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMING----QHETAVELFEKL 324
Query: 378 DGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAA 437
D + L+P+ +W+++ISGF+ G E+ + F RM + P+ +++LS C+++
Sbjct: 325 DS-EGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWT 383
Query: 438 LNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGR--DLISWNSLI 495
L G+E+HG+ ++ + +I V LI+MYMKCG +FD E + D + WN +I
Sbjct: 384 LKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMI 443
Query: 496 SGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRI 555
SGYG HG ++A+ F+ + + ++P TF LSACSH G V G +F M E+
Sbjct: 444 SGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGY 503
Query: 556 EPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETAS 615
+P+ EH C++DLLGR+G L+EA +++ M + +LL SCR H D + EE A
Sbjct: 504 KPSTEHIGCMIDLLGRSGRLREAKEVIDQMSEPSSSVY-SSLLGSCRQHLDPVLGEEAAM 562
Query: 616 QILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQS 663
++ L + F++LS+IYAA RWED +R +K L K PG S
Sbjct: 563 KLAELEPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 184/372 (49%), Gaps = 16/372 (4%)
Query: 49 TLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLD 108
++L C ++ QLH + + + ++ L+++Y+R G A ++F VP +
Sbjct: 137 SVLGGCGDIEGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHK--- 193
Query: 109 HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFF-PDGFTLPLIIEACSHLGSSSLCRIV 167
+ +N+ I + +G ++ MRKF P+ T I AC+ L + R +
Sbjct: 194 SVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQL 253
Query: 168 HCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMP-VRTILSWNTMVSGYAFNHD 226
H ++ F+ V L+ MY K + A +F + R ++SWN+++SG N
Sbjct: 254 HGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQ 313
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
A +F++++ E +P+S TW SL+S + G E + F+ M + S + L
Sbjct: 314 HETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTS 373
Query: 287 VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVF--FDIKN 344
++S C+D+ + +EIHG+VIK E +FV +LID Y K A +F F+ K
Sbjct: 374 LLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKP 433
Query: 345 KNLESWNALISSYAESGLCEEAHAV--LLQLEKSLDGHQPLRPNVISWSAVISGFASKGC 402
K+ WN +IS Y + G CE A + LL+ EK + P++ +++AV+S + G
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLREEK-------VEPSLATFTAVLSACSHCGN 486
Query: 403 GEESLELFRRMQ 414
E+ ++FR MQ
Sbjct: 487 VEKGSQIFRLMQ 498
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 81/163 (49%), Gaps = 7/163 (4%)
Query: 49 TLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
+LL CS TL+ +++H I AA R F+ LI +Y + G S A+++F+ FE
Sbjct: 373 SLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDR--FE 430
Query: 106 RLDHIPL-WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGS-SSL 163
P+ WN +I HG E AIEI+ +R+ P T ++ ACSH G+
Sbjct: 431 PKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKG 490
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGM 206
+I E G++ + ++ + G+ GR+ +A ++ D M
Sbjct: 491 SQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 287 bits (735), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 179/682 (26%), Positives = 333/682 (48%), Gaps = 88/682 (12%)
Query: 47 FITLLQQCSTLQQ---ARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
+T+L C+ ++ + +H + ++ L L+ +Y++ G +++AQ +F
Sbjct: 295 LVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK--- 351
Query: 104 FERLDHIPLWNSIIRA----NVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLG 159
++ WN+++ +HG F+ ++ G D T+ + C H
Sbjct: 352 MNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVK--ADEVTILNAVPVCFHES 409
Query: 160 SSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVS 219
+ +HC++L+ F + V N V Y K G + A ++F G+ +T+ SWN ++
Sbjct: 410 FLPSLKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIG 469
Query: 220 GYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEI 279
G+A ++D + +M++ P+S T SLLS+
Sbjct: 470 GHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSA------------------------ 505
Query: 280 SAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVF 339
C+ + + +E+HG++I+ E LFV +++ Y L +F
Sbjct: 506 -----------CSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALF 554
Query: 340 FDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFAS 399
+++K+L +SW+ VI+G+
Sbjct: 555 DAMEDKSL----------------------------------------VSWNTVITGYLQ 574
Query: 400 KGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILV 459
G + +L +FR+M L ++ ++ V C+ L +L LGRE H YA+++L++D+ +
Sbjct: 575 NGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFI 634
Query: 460 GNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGM 519
LI+MY K G + VF+ ++ + SWN++I GYG+HGL A+ F+EM + G
Sbjct: 635 ACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGH 694
Query: 520 KPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAN 579
PD +TF+ L+AC+H+GL+ G QM F ++P ++HYAC++D+LGRAG L +A
Sbjct: 695 NPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKAL 754
Query: 580 DIV-RNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAAN 638
+V M E + IW +LL+SCR H++ ++ E+ A+++ L + +++LLSN+YA
Sbjct: 755 RVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGL 814
Query: 639 GRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQM 698
G+WED +VR + L+K G SWIE+ +KV++F G G +E+ + L +++
Sbjct: 815 GKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKI 874
Query: 699 ANENYELNSCFNQECIYDQSEL 720
+ Y ++ Q + ++ ++
Sbjct: 875 SKMGYRPDTMSVQHDLSEEEKI 896
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 128/503 (25%), Positives = 213/503 (42%), Gaps = 82/503 (16%)
Query: 57 LQQARQLHSQTILTAAYRKP-FLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNS 115
++ R++H + R L ++I +YA GS ++ VF+A+ R ++ WN+
Sbjct: 100 IEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDAL---RSKNLFQWNA 156
Query: 116 IIRANVSHGYFEFAIEIYVGM-RKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALEL 174
+I + + ++ +E ++ M PD FT P +I+AC+ + + VH ++
Sbjct: 157 VISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT 216
Query: 175 GFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIF 234
G + V N LV YG G + DA QLFD MP R ++SWN+M+ ++ N
Sbjct: 217 GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDN---------- 266
Query: 235 KRMELEDWRPNSVTWTSLLSSHKRCGLYDET-LELFKLMRTRGCEI---SAEALAVVISV 290
G +E+ L L ++M G L V+ V
Sbjct: 267 -------------------------GFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPV 301
Query: 291 CADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESW 350
CA E+ + +HG+ +K + L + NAL+D Y K + +A +F NKN+ SW
Sbjct: 302 CAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSW 361
Query: 351 NALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELF 410
N ++ ++ G + H L + L G GE+
Sbjct: 362 NTMVGGFSAEG---DTHGTFDVLRQMLAG-----------------------GED----- 390
Query: 411 RRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKC 470
VK + VT + VC + L +ELH Y+++ N LV N + Y KC
Sbjct: 391 -------VKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC 443
Query: 471 GDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTAL 530
G VF I + + SWN+LI G+ +L +M +G+ PD T + L
Sbjct: 444 GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLL 503
Query: 531 SACSHAGLVAAGRNLFYQMVREF 553
SACS + G+ + ++R +
Sbjct: 504 SACSKLKSLRLGKEVHGFIIRNW 526
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 92/215 (42%), Gaps = 23/215 (10%)
Query: 428 VLSVCAELAALNLGRELHGY--AVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEG 485
+L + + +GR++H L +D++L +I MY CG VFD +
Sbjct: 90 LLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTR-IITMYAMCGSPDDSRFVFDALRS 148
Query: 486 RDLISWNSLISGYGMHGLGDNALTTFDEMIK-AGMKPDHVTFVTALSACSHAGLVAAGRN 544
++L WN++IS Y + L D L TF EMI + PDH T+ + AC+ V G
Sbjct: 149 KNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLA 208
Query: 545 LFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTH 604
+ +V+ +E A LV G G + +A + MP E N W +++ R
Sbjct: 209 VHGLVVKTGLVEDVFVGNA-LVSFYGTHGFVTDALQLFDIMP-ERNLVSWNSMI---RVF 263
Query: 605 KDTKIVEETASQILTLNSQITGSFMLLSNIYAANG 639
D EE SF+LL + NG
Sbjct: 264 SDNGFSEE--------------SFLLLGEMMEENG 284
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 287 bits (734), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 174/580 (30%), Positives = 284/580 (48%), Gaps = 90/580 (15%)
Query: 129 AIEIYVGMRKFGFFPDGFTLPLIIEAC-----SHLGSSSLCRIVHCHALELGFRNHLHVV 183
A++ ++ G + D T +I+ C H G+ +CR H G R + +V
Sbjct: 45 AMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNL-ICR----HLYFNGHRPMMFLV 99
Query: 184 NKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWR 243
N L+ MY K + DA QLFD MP R
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQR---------------------------------- 125
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREI 303
N ++WT+++S++ +C ++ + LEL LM + + V+ C + +V R +
Sbjct: 126 -NVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV---RML 181
Query: 304 HGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLC 363
H +IK G E +FV++ALID + K DA +VF ++
Sbjct: 182 HCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEM--------------------- 220
Query: 364 EEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCV 423
+ + I W+++I GFA + +LELF+RM+ A
Sbjct: 221 -------------------VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQA 261
Query: 424 TFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNI 483
T ++VL C LA L LG + H + V+ D ++++ N L++MY KCG + VF+ +
Sbjct: 262 TLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFNQM 319
Query: 484 EGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGR 543
+ RD+I+W+++ISG +G AL F+ M +G KP+++T V L ACSHAGL+ G
Sbjct: 320 KERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGW 379
Query: 544 NLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRT 603
F M + + I+P EHY C++DLLG+AG L +A ++ M EP+ W LL +CR
Sbjct: 380 YYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRV 439
Query: 604 HKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQS 663
++ + E A +++ L+ + G++ LLSNIYA + +W+ +R + +G+KK PG S
Sbjct: 440 QRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCS 499
Query: 664 WIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
WIEV K+++ F G+ H + EV L +L ++ Y
Sbjct: 500 WIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGY 539
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 157/338 (46%), Gaps = 48/338 (14%)
Query: 77 FLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGM 136
FL LI +Y +F ++ A ++F+ +P ++ W ++I A + A+E+ V M
Sbjct: 97 FLVNVLINMYVKFNLLNDAHQLFDQMPQR---NVISWTTMISAYSKCKIHQKALELLVLM 153
Query: 137 RKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRM 196
+ P+ +T ++ +C+ + S R++HC ++ G + + V + L+ ++ KLG
Sbjct: 154 LRDNVRPNVYTYSSVLRSCNGM---SDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEP 210
Query: 197 EDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSH 256
EDA +FD M + WN+++ G+A N A +FKRM
Sbjct: 211 EDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRM------------------- 251
Query: 257 KRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYL 316
KR G E L ++R C + ++ + H +++K Y+ L
Sbjct: 252 KRAGFIAEQATLTSVLRA----------------CTGLALLELGMQAHVHIVK--YDQDL 293
Query: 317 FVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKS 376
+ NAL+D Y K L DA VF +K +++ +W+ +IS A++G +EA + +++ S
Sbjct: 294 ILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSS 353
Query: 377 LDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQ 414
+PN I+ V+ + G E+ FR M+
Sbjct: 354 -----GTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK 386
Score = 109 bits (272), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 119/236 (50%), Gaps = 23/236 (9%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
+ ++L+ C+ + R LH I F+ + LI ++A+ G A VF+ +
Sbjct: 165 YSSVLRSCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTG- 223
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRI 166
D I +WNSII + + A+E++ M++ GF + TL ++ AC+ L
Sbjct: 224 -DAI-VWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA------- 274
Query: 167 VHCHALELGFRNHLHVV---------NKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTM 217
LELG + H+H+V N LV MY K G +EDA ++F+ M R +++W+TM
Sbjct: 275 ----LLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTM 330
Query: 218 VSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMR 273
+SG A N A ++F+RM+ +PN +T +L + GL ++ F+ M+
Sbjct: 331 ISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMK 386
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 286 bits (732), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 168/456 (36%), Positives = 242/456 (53%), Gaps = 14/456 (3%)
Query: 264 ETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALI 323
E++ L+ L+ G S + + A R +H + G+E F LI
Sbjct: 65 ESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTTLI 124
Query: 324 DTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPL 383
Y K L A VF ++ +++ WNA+I+ Y G + A ++L S+
Sbjct: 125 TAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAA----MELFDSMP----- 175
Query: 384 RPNVISWSAVISGFASKGCGEESLELFRRMQLAK-VKPNCVTFSTVLSVCAELAALNLGR 442
R NV SW+ VISGF+ G E+L++F M+ K VKPN +T +VL CA L L +GR
Sbjct: 176 RKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGR 235
Query: 443 ELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNI-EGRDLISWNSLISGYGMH 501
L GYA N DNI V N I MY KCG +F+ + R+L SWNS+I H
Sbjct: 236 RLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATH 295
Query: 502 GLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEH 561
G D ALT F +M++ G KPD VTFV L AC H G+V G+ LF M +I P +EH
Sbjct: 296 GKHDEALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEH 355
Query: 562 YACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLN 621
Y C++DLLGR G LQEA D+++ MP++P+ +WG LL +C H + +I E + + L
Sbjct: 356 YGCMIDLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLE 415
Query: 622 SQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSW-IEVRKKVYTFSAGNIV 680
G+ +++SNIYAAN +W+ R+R KK+ + K G S+ +EV V+ F+ +
Sbjct: 416 PTNPGNCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKS 475
Query: 681 HLGLDEVYVILEELALQMANENYELNSCFNQE--CI 714
H E+Y +LEE+ +M E +S E CI
Sbjct: 476 HPRSYEIYQVLEEIFRRMKLEKSRFDSLLQPEQLCI 511
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 182/391 (46%), Gaps = 27/391 (6%)
Query: 61 RQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVF----NAVPFERLDHIPLWNSI 116
+QLH+ + T L +L+ + ++ +A+K+F N+ F L+N +
Sbjct: 5 KQLHAHCLRTGVDETKDLLQRLLLI----PNLVYARKLFDHHQNSCTF-------LYNKL 53
Query: 117 IRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGF 176
I+A H +I +Y + G P T I A + S+ R++H GF
Sbjct: 54 IQAYYVHHQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGF 113
Query: 177 RNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKR 236
+ L+ Y KLG + A ++FD M R + WN M++GY D A +F
Sbjct: 114 ESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDS 173
Query: 237 MELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLM-RTRGCEISAEALAVVISVCADVV 295
M R N +WT+++S + G Y E L++F M + + + + + V+ CA++
Sbjct: 174 MP----RKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLG 229
Query: 296 EVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN-KNLESWNALI 354
E++ R + GY + G+ D ++V NA I+ Y K + A +F ++ N +NL SWN++I
Sbjct: 230 ELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMI 289
Query: 355 SSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM- 413
S A G +EA + Q+ + + +P+ +++ ++ G + ELF+ M
Sbjct: 290 GSLATHGKHDEALTLFAQMLREGE-----KPDAVTFVGLLLACVHGGMVVKGQELFKSME 344
Query: 414 QLAKVKPNCVTFSTVLSVCAELAALNLGREL 444
++ K+ P + ++ + + L +L
Sbjct: 345 EVHKISPKLEHYGCMIDLLGRVGKLQEAYDL 375
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 286 bits (731), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 166/544 (30%), Positives = 284/544 (52%), Gaps = 50/544 (9%)
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMED--ACQLFDGMPVRTILSWNTMVSGYAFN 224
+H H L G +++ KL+ KLG D A ++ + + R W ++ GYA
Sbjct: 68 IHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIE 127
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
G +DE + ++ MR +
Sbjct: 128 -----------------------------------GKFDEAIAMYGCMRKEEITPVSFTF 152
Query: 285 AVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN 344
+ ++ C + +++ R+ H + +++V N +ID Y K + + A VF ++
Sbjct: 153 SALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPE 212
Query: 345 KNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGE 404
+++ SW LI++YA G E A + L P + ++++W+A+++GFA +
Sbjct: 213 RDVISWTELIAAYARVGNMECAAELFESL--------PTK-DMVAWTAMVTGFAQNAKPQ 263
Query: 405 ESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRN--LMDDNILVGNG 462
E+LE F RM+ + ++ + VT + +S CA+L A A ++ D++++G+
Sbjct: 264 EALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSA 323
Query: 463 LINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMI-KAGMKP 521
LI+MY KCG+ ++ VF ++ +++ +++S+I G HG AL F M+ + +KP
Sbjct: 324 LIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKP 383
Query: 522 DHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI 581
+ VTFV AL ACSH+GLV GR +F M + F ++PT +HY C+VDLLGR G LQEA ++
Sbjct: 384 NTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALEL 443
Query: 582 VRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRW 641
++ M +EP+ +WGALL +CR H + +I E A + L I G+++LLSN+YA+ G W
Sbjct: 444 IKTMSVEPHGGVWGALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDW 503
Query: 642 EDSARVRISAKKKGLKKTPGQSW-IEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMAN 700
RVR K+KGLKKTP SW ++ +++ F GN+ H +++ LEEL ++
Sbjct: 504 GGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTV 563
Query: 701 ENYE 704
Y+
Sbjct: 564 LGYQ 567
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 188/407 (46%), Gaps = 24/407 (5%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSV--SHAQKVFNAVPF 104
I+ L C L Q +Q+H + + ++ KLI + G +A++V V F
Sbjct: 52 LISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQF 111
Query: 105 ERLDHIP-LWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
P LW ++IR G F+ AI +Y MRK P FT +++AC + +L
Sbjct: 112 RN----PFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNL 167
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
R H L ++V N ++ MY K ++ A ++FD MP R ++SW +++ YA
Sbjct: 168 GRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYAR 227
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
+ A+ +F+ + +D V WT++++ + E LE F M G
Sbjct: 228 VGNMECAAELFESLPTKDM----VAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVT 283
Query: 284 LAVVISVCADVVE---VDRSREIHGYVIKGGY--EDYLFVKNALIDTYRKHKHLGDAHNV 338
+A IS CA + DR+ +I K GY D++ + +ALID Y K ++ +A NV
Sbjct: 284 VAGYISACAQLGASKYADRAVQI---AQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNV 340
Query: 339 FFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFA 398
F + NKN+ +++++I A G +EA L L + ++PN +++ + +
Sbjct: 341 FMSMNNKNVFTYSSMILGLATHGRAQEA----LHLFHYMVTQTEIKPNTVTFVGALMACS 396
Query: 399 SKGCGEESLELFRRM-QLAKVKPNCVTFSTVLSVCAELAALNLGREL 444
G ++ ++F M Q V+P ++ ++ + L EL
Sbjct: 397 HSGLVDQGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALEL 443
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 285 bits (728), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 155/466 (33%), Positives = 265/466 (56%), Gaps = 15/466 (3%)
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREI 303
P+ +T+ +++ GL D+ L+ + + + + ++ C+ + I
Sbjct: 93 PDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----TKSGKLI 148
Query: 304 HGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLC 363
H +V+K G +V L+D Y K + A VF + ++L S A+I+ YA+ G
Sbjct: 149 HTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNV 208
Query: 364 EEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM-QLAKVKPNC 422
E A A+ + +++SW+ +I G+A G ++L LF+++ K KP+
Sbjct: 209 EAARALFDSM---------CERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDE 259
Query: 423 VTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDN 482
+T LS C+++ AL GR +H + + + N+ V GLI+MY KCG ++ LVF++
Sbjct: 260 ITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFND 319
Query: 483 IEGRDLISWNSLISGYGMHGLGDNALTTFDEMIK-AGMKPDHVTFVTALSACSHAGLVAA 541
+D+++WN++I+GY MHG +AL F+EM G++P +TF+ L AC+HAGLV
Sbjct: 320 TPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNE 379
Query: 542 GRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSC 601
G +F M +E+ I+P +EHY CLV LLGRAG L+ A + ++NM ++ + +W ++L SC
Sbjct: 380 GIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSC 439
Query: 602 RTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPG 661
+ H D + +E A ++ LN + +G ++LLSNIYA+ G +E A+VR K+KG+ K PG
Sbjct: 440 KLHGDFVLGKEIAEYLIGLNIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPG 499
Query: 662 QSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENYELNS 707
S IE+ KV+ F AG+ H E+Y +L +++ ++ + Y N+
Sbjct: 500 ISTIEIENKVHEFRAGDREHSKSKEIYTMLRKISERIKSHGYVPNT 545
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 204/446 (45%), Gaps = 27/446 (6%)
Query: 50 LLQQCSTLQQARQLHSQTI---LTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
L+ + ++ + Q+H+ + L R P L KL YA G + H+ +F+ +
Sbjct: 35 LIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFH----QT 90
Query: 107 LD-HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCR 165
+D + L+ + I +G + A +YV + P+ FT ++++CS + +
Sbjct: 91 IDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCS----TKSGK 146
Query: 166 IVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNH 225
++H H L+ G +V LV +Y K G + A ++FD MP R+++S M++ YA
Sbjct: 147 LIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQG 206
Query: 226 DCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALA 285
+ A +F M D V+W ++ + + G ++ L LF+ + G E
Sbjct: 207 NVEAARALFDSMCERDI----VSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITV 262
Query: 286 V-VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN 344
V +S C+ + ++ R IH +V + V LID Y K L +A VF D
Sbjct: 263 VAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPR 322
Query: 345 KNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGE 404
K++ +WNA+I+ YA G ++A L+L + G L+P I++ + A G
Sbjct: 323 KDIVAWNAMIAGYAMHGYSQDA----LRLFNEMQGITGLQPTDITFIGTLQACAHAGLVN 378
Query: 405 ESLELFRRM-QLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNL-MDDNILVGNG 462
E + +F M Q +KP + ++S+ L E ++N+ MD + ++ +
Sbjct: 379 EGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYE----TIKNMNMDADSVLWSS 434
Query: 463 LINMYMKCGDFKKGHLVFDNIEGRDL 488
++ GDF G + + + G ++
Sbjct: 435 VLGSCKLHGDFVLGKEIAEYLIGLNI 460
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 182/655 (27%), Positives = 313/655 (47%), Gaps = 50/655 (7%)
Query: 51 LQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPF--ERLD 108
L C +L +QLH+ + T K +++ + ++S+A VF+++P E +
Sbjct: 19 LSFCKSLNHIKQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYALNVFSSIPSPPESIV 78
Query: 109 HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVH 168
P + R++ F Y +R G D F+ I++A S + + +H
Sbjct: 79 FNPFLRDLSRSSEPRATILF----YQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELH 134
Query: 169 CHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCV 228
A ++ V + MY GR+ A +FD M R +
Sbjct: 135 GVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDV----------------- 177
Query: 229 GASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVI 288
VTW +++ + R GL DE +LF+ M+ L ++
Sbjct: 178 ------------------VTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIV 219
Query: 289 SVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE 348
S C + +R I+ ++I+ + AL+ Y + A F + +NL
Sbjct: 220 SACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLF 279
Query: 349 SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLE 408
A++S Y++ G ++A + Q EK +++ W+ +IS + +E+L
Sbjct: 280 VSTAMVSGYSKCGRLDDAQVIFDQTEKK---------DLVCWTTMISAYVESDYPQEALR 330
Query: 409 LFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYM 468
+F M + +KP+ V+ +V+S CA L L+ + +H N ++ + + N LINMY
Sbjct: 331 VFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYA 390
Query: 469 KCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVT 528
KCG VF+ + R+++SW+S+I+ MHG +AL+ F M + ++P+ VTFV
Sbjct: 391 KCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVG 450
Query: 529 ALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIE 588
L CSH+GLV G+ +F M E+ I P +EHY C+VDL GRA LL+EA +++ +MP+
Sbjct: 451 VLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVA 510
Query: 589 PNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVR 648
N IWG+L+++CR H + ++ + A +IL L G+ +L+SNIYA RWED +R
Sbjct: 511 SNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIR 570
Query: 649 ISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
++K + K G S I+ K + F G+ H +E+Y L+E+ ++ Y
Sbjct: 571 RVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGY 625
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 123/270 (45%), Gaps = 29/270 (10%)
Query: 3 NAAPVRFLCSSSLRFRPHFLTRSFSLXXXXXXXXXXXXXXXEDFFITLLQQCSTLQQARQ 62
N A FL + +R H LT +T+ + AR+
Sbjct: 231 NRAIYEFLIENDVRMDTHLLTA----------------------LVTMYAGAGCMDMARE 268
Query: 63 LHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVS 122
+ + R F++ +++ Y++ G + AQ +F+ E+ D + W ++I A V
Sbjct: 269 FFRKM----SVRNLFVSTAMVSGYSKCGRLDDAQVIFDQT--EKKDLV-CWTTMISAYVE 321
Query: 123 HGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHV 182
Y + A+ ++ M G PD ++ +I AC++LG + VH G + L +
Sbjct: 322 SDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSI 381
Query: 183 VNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDW 242
N L+ MY K G ++ +F+ MP R ++SW++M++ + + + A +F RM+ E+
Sbjct: 382 NNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENV 441
Query: 243 RPNSVTWTSLLSSHKRCGLYDETLELFKLM 272
PN VT+ +L GL +E ++F M
Sbjct: 442 EPNEVTFVGVLYGCSHSGLVEEGKKIFASM 471
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 284 bits (726), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 188/645 (29%), Positives = 307/645 (47%), Gaps = 92/645 (14%)
Query: 62 QLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANV 121
QL S + T + I +Y+R GS A++VF+ + F+ D I WNS++
Sbjct: 195 QLQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK--DMIS-WNSLLSGLS 251
Query: 122 SHGYFEF-AIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHL 180
G F F A+ I+ M + G D + +I C H L R +H ++ G+ + L
Sbjct: 252 QEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLL 311
Query: 181 HVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELE 240
V N L+ Y K G +E +F M R ++SW TM+S N D A IF M +
Sbjct: 312 EVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS---NKD--DAVSIFLNMRFD 366
Query: 241 DWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRS 300
PN VT+ L+++ K C + ++
Sbjct: 367 GVYPNEVTFVGLINAVK---------------------------------CNE--QIKEG 391
Query: 301 REIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAES 360
+IHG IK G+ V N+ I Y K + L DA F DI +
Sbjct: 392 LKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFRE-------------- 437
Query: 361 GLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKP 420
+ISW+A+ISGFA G E+L++F A+ P
Sbjct: 438 --------------------------IISWNAMISGFAQNGFSHEALKMFLSAA-AETMP 470
Query: 421 NCVTFSTVLSVCA--ELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHL 478
N TF +VL+ A E ++ G+ H + ++ ++ +V + L++MY K G+ +
Sbjct: 471 NEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEK 530
Query: 479 VFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGL 538
VF+ + ++ W S+IS Y HG + + F +MIK + PD VTF++ L+AC+ G+
Sbjct: 531 VFNEMSQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGM 590
Query: 539 VAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALL 598
V G +F M+ + +EP+ EHY+C+VD+LGRAG L+EA +++ +P P E + ++L
Sbjct: 591 VDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSML 650
Query: 599 NSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKK 658
SCR H + K+ + A + + +++GS++ + NIYA W+ +A +R + +KK + K
Sbjct: 651 GSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSK 710
Query: 659 TPGQSWIEVRK-----KVYTFSAGNIVHLGLDEVYVILEELALQM 698
G SWI+V + FS+G+ H DE+Y ++E + L+M
Sbjct: 711 EAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEM 755
Score = 121 bits (304), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 168/384 (43%), Gaps = 64/384 (16%)
Query: 296 EVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALIS 355
++ R +IHG+ G+ ++ V NA++ YRK +A +F +NL
Sbjct: 91 DLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIF-----ENL-------- 137
Query: 356 SYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQL 415
+ P+V+SW+ ++SGF + +L RM+
Sbjct: 138 ---------------------------VDPDVVSWNTILSGFDDN---QIALNFVVRMKS 167
Query: 416 AKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKK 475
A V + T+ST LS C LG +L V+ ++ +++VGN I MY + G F+
Sbjct: 168 AGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGSFRG 227
Query: 476 GHLVFDNIEGRDLISWNSLISGYGMHG-LGDNALTTFDEMIKAGMKPDHVTFVTALSACS 534
VFD + +D+ISWNSL+SG G G A+ F +M++ G++ DHV+F + ++ C
Sbjct: 228 ARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCC 287
Query: 535 HAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIW 594
H + R + ++ E +E L+ + G+L+ + M E N W
Sbjct: 288 HETDLKLARQIHGLCIKR-GYESLLEVGNILMSRYSKCGVLEAVKSVFHQMS-ERNVVSW 345
Query: 595 GALLNSCRTHKDTKIVEETASQILTLNSQITG------SFMLLSNIYAANGRWEDSARVR 648
+++S +KD + + LN + G +F+ L N N + ++ ++
Sbjct: 346 TTMISS---NKDDAVS-------IFLNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIH 395
Query: 649 ISAKKKGLKKTP--GQSWIEVRKK 670
K G P G S+I + K
Sbjct: 396 GLCIKTGFVSEPSVGNSFITLYAK 419
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 127/263 (48%), Gaps = 7/263 (2%)
Query: 57 LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSI 116
+++ ++H I T +P + I LYA+F ++ A+K F + F I WN++
Sbjct: 388 IKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFR---EIISWNAM 444
Query: 117 IRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHA--LEL 174
I +G+ A+++++ P+ +T ++ A + S+ + CHA L+L
Sbjct: 445 ISGFAQNGFSHEALKMFLSAAA-ETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLKL 503
Query: 175 GFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIF 234
G + V + L+ MY K G ++++ ++F+ M + W +++S Y+ + D +F
Sbjct: 504 GLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNLF 563
Query: 235 KRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLM-RTRGCEISAEALAVVISVCAD 293
+M E+ P+ VT+ S+L++ R G+ D+ E+F +M E S E + ++ +
Sbjct: 564 HKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGR 623
Query: 294 VVEVDRSREIHGYVIKGGYEDYL 316
+ + E+ V G E L
Sbjct: 624 AGRLKEAEELMSEVPGGPGESML 646
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 79/157 (50%), Gaps = 12/157 (7%)
Query: 56 TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNS 115
+++Q ++ H+ + P +++ L+ +YA+ G++ ++KVFN + + +W S
Sbjct: 489 SVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMS---QKNQFVWTS 545
Query: 116 IIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSS-----LCRIVHCH 170
II A SHG FE + ++ M K PD T ++ AC+ G ++ +
Sbjct: 546 IISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVY 605
Query: 171 ALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMP 207
LE +H H + +V M G+ GR+++A +L +P
Sbjct: 606 NLE---PSHEH-YSCMVDMLGRAGRLKEAEELMSEVP 638
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 81/179 (45%), Gaps = 11/179 (6%)
Query: 423 VTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDN 482
VT L C L G ++HG++ + + V N ++ MY K G F +F+N
Sbjct: 79 VTLCLALKACR--GDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFEN 136
Query: 483 IEGRDLISWNSLISGYGMHGLGDN--ALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVA 540
+ D++SWN+++SG+ DN AL M AG+ D T+ TALS C +
Sbjct: 137 LVDPDVVSWNTILSGF-----DDNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFL 191
Query: 541 AGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLN 599
G L +V+ +E + + + R+G + A + M + + W +LL+
Sbjct: 192 LGLQLQSTVVKT-GLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFK-DMISWNSLLS 248
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 195/652 (29%), Positives = 303/652 (46%), Gaps = 109/652 (16%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGF 141
L++ + G + +A +VF+ +P ER D + +WN++I GY E ++E++ M K G
Sbjct: 129 LLSASFKLGDIEYAFEVFDKMP-ER-DDVAIWNAMITGCKESGYHETSVELFREMHKLGV 186
Query: 142 FPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQ 201
D F I+ C + GS + VH ++ GF VVN L+ MY + DAC
Sbjct: 187 RHDKFGFATILSMCDY-GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACL 245
Query: 202 LFD--GMPVRTILSWNTMVSGYA-FNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKR 258
+F+ + VR +++N ++ G A F D + +F++M RP +T+ S++ S
Sbjct: 246 VFEETDVAVRDQVTFNVVIDGLAGFKRD--ESLLVFRKMLEASLRPTDLTFVSVMGS--- 300
Query: 259 CGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFV 318
C +A ++HG IK GYE Y V
Sbjct: 301 ------------------CSCAA-----------------MGHQVHGLAIKTGYEKYTLV 325
Query: 319 KNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAV--------- 369
NA + Y + G AH VF ++ K+L +WN +ISSY ++ L + A +V
Sbjct: 326 SNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMHIIGV 385
Query: 370 ---------LLQLEKSLDGHQPLRPNVISW---------SAVISGFASKGCGEESLELFR 411
LL LD + ++ +I + +A+IS ++ G E++ LF
Sbjct: 386 KPDEFTFGSLLATSLDLDVLEMVQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFE 445
Query: 412 RM---------------------------------QLAKVKPNCVTFSTVLSVCAELAAL 438
R ++ P+ T ST+LS+C ++L
Sbjct: 446 RSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDAYTLSTLLSICVSTSSL 505
Query: 439 NLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGY 498
LG + H Y +R+ L+GN LINMY +CG + VF+ + +D++SWNSLIS Y
Sbjct: 506 MLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAY 565
Query: 499 GMHGLGDNALTTFDEMIKAG-MKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEP 557
HG G+NA+ T+ M G + PD TF LSACSHAGLV G +F MV +
Sbjct: 566 SRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIR 625
Query: 558 TVEHYACLVDLLGRAGLLQEANDIVR--NMPIEPNEYIWGALLNSCRTHKDTKIVEETAS 615
V+H++CLVDLLGRAG L EA +V+ I +W AL ++C H D K+ + A
Sbjct: 626 NVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAK 685
Query: 616 QILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEV 667
++ ++ LSNIYA G W+++ R + G K G SW+ +
Sbjct: 686 LLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 132/513 (25%), Positives = 234/513 (45%), Gaps = 73/513 (14%)
Query: 143 PDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQL 202
PD +++ L I HL + VHC+A+ G H HV N L+ +Y +LG + +
Sbjct: 55 PDQYSVSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKK 114
Query: 203 FDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLY 262
FD + + SW T++S D A +F +M R + W ++++ K G +
Sbjct: 115 FDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFDKMP---ERDDVAIWNAMITGCKESGYH 171
Query: 263 DETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNAL 322
+ ++ELF+ M G A ++S+C D +D +++H VIK G+ V NAL
Sbjct: 172 ETSVELFREMHKLGVRHDKFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNAL 230
Query: 323 IDTYRKHKHLGDAHNVF--FDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGH 380
I Y + + DA VF D+ ++ ++N +I DG
Sbjct: 231 ITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVI-----------------------DG- 266
Query: 381 QPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNL 440
++GF +ESL +FR+M A ++P +TF +V+ C+ A +
Sbjct: 267 -------------LAGFKR----DESLLVFRKMLEASLRPTDLTFVSVMGSCSCAA---M 306
Query: 441 GRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGM 500
G ++HG A++ + LV N + MY DF H VF+++E +DL++WN++IS Y
Sbjct: 307 GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQ 366
Query: 501 HGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVE 560
LG +A++ + M G+KPD TF + L+ ++ + + +F + +E
Sbjct: 367 AKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVL----EMVQACIIKFGLSSKIE 422
Query: 561 HYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLN---------------SCRTHK 605
L+ + G +++A D++ + N W A+++ SC
Sbjct: 423 ISNALISAYSKNGQIEKA-DLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLES 481
Query: 606 DTKIVEE--TASQILTLNSQITGSFMLLSNIYA 636
+ +I+ + T S +L++ T S ML S +A
Sbjct: 482 EVRILPDAYTLSTLLSICVS-TSSLMLGSQTHA 513
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 184/436 (42%), Gaps = 49/436 (11%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
F++++ CS Q+H I T + ++ + +Y+ F A KVF ++ E
Sbjct: 294 FVSVMGSCSCAAMGHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESL--EE 351
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRI 166
D + WN++I + + A+ +Y M G PD FT ++ L + +
Sbjct: 352 KDLVT-WNTMISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLLATSLDL---DVLEM 407
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHD 226
V ++ G + + + N L+ Y K G++E A LF+ + ++SWN ++SG+ N
Sbjct: 408 VQACIIKFGLSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHN-- 465
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA--L 284
G E LE F + I +A L
Sbjct: 466 ---------------------------------GFPFEGLERFSCLLESEVRILPDAYTL 492
Query: 285 AVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN 344
+ ++S+C + + H YV++ G + NALI+ Y + + ++ VF +
Sbjct: 493 STLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSE 552
Query: 345 KNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGE 404
K++ SWN+LIS+Y+ G E A + K++ + P+ ++SAV+S + G E
Sbjct: 553 KDVVSWNSLISAYSRHGEGENA----VNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVE 608
Query: 405 ESLELFRRM-QLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
E LE+F M + V N FS ++ + L+ L + + + + V L
Sbjct: 609 EGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTI-GSRVDVWWAL 667
Query: 464 INMYMKCGDFKKGHLV 479
+ GD K G +V
Sbjct: 668 FSACAAHGDLKLGKMV 683
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 179/378 (47%), Gaps = 50/378 (13%)
Query: 302 EIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESG 361
++H Y I+ G + V N L+ Y + +L F +I ++ SW L+S+ + G
Sbjct: 78 QVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLG 137
Query: 362 LCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPN 421
E A V ++ P R +V W+A+I+G G E S+ELFR M V+ +
Sbjct: 138 DIEYAFEVFDKM--------PERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHD 189
Query: 422 CVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFD 481
F+T+LS+C + +L+ G+++H ++ V N LI MY C LVF+
Sbjct: 190 KFGFATILSMC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFE 248
Query: 482 --NIEGRDLISWNSLISGYGMHGLG-DNALTTFDEMIKAGMKPDHVTFVTALSACSHAG- 537
++ RD +++N +I G+ G D +L F +M++A ++P +TFV+ + +CS A
Sbjct: 249 ETDVAVRDQVTFNVVID--GLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCAAM 306
Query: 538 -----------------LVAAGRNLFYQMVREF----RIEPTVEH-----YACLVDLLGR 571
LV+ Y +F ++ ++E + ++ +
Sbjct: 307 GHQVHGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQ 366
Query: 572 AGLLQEANDIVRNMPI---EPNEYIWGALLNSCRTHKDTKIVEETASQILT--LNSQITG 626
A L + A + + M I +P+E+ +G+LL T D ++E + I+ L+S+I
Sbjct: 367 AKLGKSAMSVYKRMHIIGVKPDEFTFGSLL---ATSLDLDVLEMVQACIIKFGLSSKIEI 423
Query: 627 SFMLLSNIYAANGRWEDS 644
S L+S Y+ NG+ E +
Sbjct: 424 SNALIS-AYSKNGQIEKA 440
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 106/246 (43%), Gaps = 24/246 (9%)
Query: 49 TLLQQC---STLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
TLL C S+L Q H+ + +++ + LI +Y++ G++ ++ +VFN + +
Sbjct: 494 TLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEK 553
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFG-FFPDGFTLPLIIEACSHLGSSS-- 162
+ WNS+I A HG E A+ Y M+ G PD T ++ ACSH G
Sbjct: 554 ---DVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEG 610
Query: 163 ---LCRIVHCHALELGFRN--HLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTM 217
+V H + RN H + L+G G L E ++ + + W +
Sbjct: 611 LEIFNSMVEFHGV---IRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWAL 667
Query: 218 VSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLE------LFKL 271
S A + D + ++ ++ +E + + + L + + G++ E E +
Sbjct: 668 FSACAAHGD-LKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGA 726
Query: 272 MRTRGC 277
M+ RGC
Sbjct: 727 MKQRGC 732
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 88/201 (43%), Gaps = 33/201 (16%)
Query: 371 LQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM-QLAKVKPNCVTFSTVL 429
L L +SL +++ + ++G G +L+LF + + ++P+ + S +
Sbjct: 5 LCLTESLSAIAENSTTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAI 64
Query: 430 SVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGD----------------- 472
+ L G ++H YA+R+ + + V N L+++Y + G+
Sbjct: 65 TTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVY 124
Query: 473 ---------FKKGHL-----VFDNIEGRDLIS-WNSLISGYGMHGLGDNALTTFDEMIKA 517
FK G + VFD + RD ++ WN++I+G G + ++ F EM K
Sbjct: 125 SWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKL 184
Query: 518 GMKPDHVTFVTALSACSHAGL 538
G++ D F T LS C + L
Sbjct: 185 GVRHDKFGFATILSMCDYGSL 205
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 283 bits (723), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 149/426 (34%), Positives = 249/426 (58%), Gaps = 19/426 (4%)
Query: 301 REIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAES 360
+ H ++ G + FV+ +L++ Y L A VF D +K+L +WN+++++YA++
Sbjct: 82 QRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKA 141
Query: 361 GLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAK--- 417
GL ++A + ++ P R NVISWS +I+G+ G +E+L+LFR MQL K
Sbjct: 142 GLIDDARKLFDEM--------PER-NVISWSCLINGYVMCGKYKEALDLFREMQLPKPNE 192
Query: 418 --VKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKK 475
V+PN T STVLS C L AL G+ +H Y + ++ +I++G LI+MY KCG ++
Sbjct: 193 AFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLER 252
Query: 476 GHLVFDNI-EGRDLISWNSLISGYGMHGLGDNALTTFDEMIKA-GMKPDHVTFVTALSAC 533
VF+ + +D+ +++++I M+GL D F EM + + P+ VTFV L AC
Sbjct: 253 AKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGAC 312
Query: 534 SHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYI 593
H GL+ G++ F M+ EF I P+++HY C+VDL GR+GL++EA + +MP+EP+ I
Sbjct: 313 VHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLI 372
Query: 594 WGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKK 653
WG+LL+ R D K E +++ L+ +G+++LLSN+YA GRW + +R +
Sbjct: 373 WGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKCIRHEMEV 432
Query: 654 KGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENYELNSCFNQEC 713
KG+ K PG S++EV V+ F G+ + +Y +L+E+ ++ Y ++ +E
Sbjct: 433 KGINKVPGCSYVEVEGVVHEFVVGDESQQESERIYAMLDEIMQRLREAGYVTDT---KEV 489
Query: 714 IYDQSE 719
+ D +E
Sbjct: 490 LLDLNE 495
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/376 (24%), Positives = 166/376 (44%), Gaps = 27/376 (7%)
Query: 112 LWNSIIRA---NVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVH 168
LWN IIRA NVS I +Y+ MR PD T P ++ + + L + H
Sbjct: 26 LWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTH 85
Query: 169 CHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCV 228
L G V L+ MY G + A ++FD + + +WN++V+ YA
Sbjct: 86 AQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLID 145
Query: 229 GASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMR--------TRGCEIS 280
A ++F M N ++W+ L++ + CG Y E L+LF+ M+ R E +
Sbjct: 146 DARKLFDEMP----ERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFT 201
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFF 340
++ V+S C + +++ + +H Y+ K E + + ALID Y K L A VF
Sbjct: 202 ---MSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFN 258
Query: 341 DI-KNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFAS 399
+ K++++++A+I A GL +E QL + + PN +++ ++
Sbjct: 259 ALGSKKDVKAYSAMICCLAMYGLTDEC----FQLFSEMTTSDNINPNSVTFVGILGACVH 314
Query: 400 KGCGEESLELFRRM-QLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNIL 458
+G E F+ M + + P+ + ++ + L +E + M+ ++L
Sbjct: 315 RGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSG---LIKEAESFIASMPMEPDVL 371
Query: 459 VGNGLINMYMKCGDFK 474
+ L++ GD K
Sbjct: 372 IWGSLLSGSRMLGDIK 387
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 37/211 (17%)
Query: 407 LELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINM 466
+ ++ RM+ +V P+ TF +L L LG+ H + +D + V L+NM
Sbjct: 47 ISVYLRMRNHRVSPDFHTFPFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNM 106
Query: 467 YMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMI----------- 515
Y CGD + VFD+ +DL +WNS+++ Y GL D+A FDEM
Sbjct: 107 YSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLI 166
Query: 516 -------------------------KAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMV 550
+A ++P+ T T LSAC G + G+ + +
Sbjct: 167 NGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGK-WVHAYI 225
Query: 551 REFRIEPTVEHYACLVDLLGRAGLLQEANDI 581
++ +E + L+D+ + G L+ A +
Sbjct: 226 DKYHVEIDIVLGTALIDMYAKCGSLERAKRV 256
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 101/201 (50%), Gaps = 16/201 (7%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMR---- 137
++ YA+ G + A+K+F+ +P ER ++ W+ +I V G ++ A++++ M+
Sbjct: 134 VVNAYAKAGLIDDARKLFDEMP-ER--NVISWSCLINGYVMCGKYKEALDLFREMQLPKP 190
Query: 138 -KFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRM 196
+ P+ FT+ ++ AC LG+ + VH + + + + L+ MY K G +
Sbjct: 191 NEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSL 250
Query: 197 EDACQLFDGM-PVRTILSWNTMV---SGYAFNHDCVGASRIFKRMELED-WRPNSVTWTS 251
E A ++F+ + + + +++ M+ + Y +C ++F M D PNSVT+
Sbjct: 251 ERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECF---QLFSEMTTSDNINPNSVTFVG 307
Query: 252 LLSSHKRCGLYDETLELFKLM 272
+L + GL +E FK+M
Sbjct: 308 ILGACVHRGLINEGKSYFKMM 328
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 282 bits (722), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 174/635 (27%), Positives = 302/635 (47%), Gaps = 76/635 (11%)
Query: 63 LHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVS 122
LH ++ ++ FL LI +Y++ G + A +F+ ER D + WNS+I V
Sbjct: 170 LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ER-DQVS-WNSLISGYVR 226
Query: 123 HGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACS---HLGSSSLCRIVHCHALELGFRNH 179
G E + + M + G + L +++AC + G +HC+ +LG
Sbjct: 227 VGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFD 286
Query: 180 LHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMEL 239
+ V L+ MY K G +++A +LF MP + ++++N M+SG+ + E+
Sbjct: 287 IVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGF------------LQMDEI 334
Query: 240 EDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDR 299
D + E +LF M+ RG E S +VV+ C+ ++
Sbjct: 335 TDEASS------------------EAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEY 376
Query: 300 SREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAE 359
R+IH + K ++ F+ +ALI+ Y D F +++ SW ++I
Sbjct: 377 GRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMI----- 431
Query: 360 SGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVK 419
+ H QLE + D LFR++ + ++
Sbjct: 432 -----DCHVQNEQLESAFD------------------------------LFRQLFSSHIR 456
Query: 420 PNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLV 479
P T S ++S CA+ AAL+ G ++ GYA+++ +D V I+MY K G+ + V
Sbjct: 457 PEEYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQV 516
Query: 480 FDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLV 539
F ++ D+ +++++IS HG + AL F+ M G+KP+ F+ L AC H GLV
Sbjct: 517 FIEVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLV 576
Query: 540 AAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLN 599
G F M ++RI P +H+ CLVDLLGR G L +A +++ + + + W ALL+
Sbjct: 577 TQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLS 636
Query: 600 SCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKT 659
SCR +KD+ I + A +++ L + +GS++LL NIY +G + VR + +G+KK
Sbjct: 637 SCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKE 696
Query: 660 PGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEEL 694
P SWI + + ++F+ ++ H +Y +LE +
Sbjct: 697 PALSWIVIGNQTHSFAVADLSHPSSQMIYTMLETM 731
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 110/528 (20%), Positives = 214/528 (40%), Gaps = 114/528 (21%)
Query: 150 LIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR 209
++ + + GS L ++ H H ++ L+++N L+ MY K + A QLFD MP R
Sbjct: 52 ILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPER 111
Query: 210 TILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELF 269
I+S+N SL+S + + G Y++ +ELF
Sbjct: 112 NIISFN-----------------------------------SLISGYTQMGFYEQAMELF 136
Query: 270 KLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKH 329
R ++ A + C + ++D +HG V+ G +F+ N LID Y K
Sbjct: 137 LEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKC 196
Query: 330 KHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQL---------------- 373
L A ++F ++ SWN+LIS Y G EE +L ++
Sbjct: 197 GKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVL 256
Query: 374 ------------EKSLDGH-----QPLRPNVISWSAVISGFASKGCGEESLELFR----- 411
EK + H + +++ +A++ +A G +E+++LF
Sbjct: 257 KACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSK 316
Query: 412 -------------------------------RMQLAKVKPNCVTFSTVLSVCAELAALNL 440
MQ ++P+ TFS VL C+ L
Sbjct: 317 NVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEY 376
Query: 441 GRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGM 500
GR++H +N + +G+ LI +Y G + G F + +D+ SW S+I +
Sbjct: 377 GRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQ 436
Query: 501 HGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVE 560
+ ++A F ++ + ++P+ T +SAC+ +++G + ++ + I+ ++
Sbjct: 437 NEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSG-----EQIQGYAIKSGID 491
Query: 561 HYACL----VDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTH 604
+ + + + ++G + AN + + P+ + A+++S H
Sbjct: 492 AFTSVKTSSISMYAKSGNMPLANQVFIEVQ-NPDVATYSAMISSLAQH 538
Score = 106 bits (265), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 123/253 (48%), Gaps = 8/253 (3%)
Query: 371 LQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLS 430
L + L P R N+IS++++ISG+ G E+++ELF + A +K + T++ L
Sbjct: 98 LGFARQLFDRMPER-NIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALG 156
Query: 431 VCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLIS 490
C E L+LG LHG V N + + + N LI+MY KCG + +FD + RD +S
Sbjct: 157 FCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVS 216
Query: 491 WNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACS---HAGLVAAGRNLFY 547
WNSLISGY G + L +M + G+ + L AC + G + G + +
Sbjct: 217 WNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAI-H 275
Query: 548 QMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDT 607
+ +E + L+D+ + G L+EA + MP N + A+++ +
Sbjct: 276 CYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMP-SKNVVTYNAMISGFLQMDE- 333
Query: 608 KIVEETASQILTL 620
I +E +S+ L
Sbjct: 334 -ITDEASSEAFKL 345
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/413 (22%), Positives = 166/413 (40%), Gaps = 64/413 (15%)
Query: 47 FITLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F +L+ CS TL+ RQ+H+ F+ + LI LYA GS + F +
Sbjct: 361 FSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQCFASTS 420
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
+ I W S+I +V + E A +++ + P+ +T+ L++ AC+ + S
Sbjct: 421 KQ---DIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSS 477
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
+ +A++ G V + MY K G M A Q+F + + +++ M+S A
Sbjct: 478 GEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQ 537
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
+ A IF+ M+ +PN + +L + GL + L+ F+ M+
Sbjct: 538 HGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMK---------- 587
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
+ Y I + + L+D + L DA N+
Sbjct: 588 --------------------NDYRINPNEKHF----TCLVDLLGRTGRLSDAENLILSSG 623
Query: 344 NKNLE-SWNALISS---YAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFAS 399
++ +W AL+SS Y +S + + L++LE G L N+ + S V S
Sbjct: 624 FQDHPVTWRALLSSCRVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSS--- 680
Query: 400 KGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNL 452
EE EL R + K +P L+ + +G + H +AV +L
Sbjct: 681 ---AEEVRELMRDRGVKK-EP-------------ALSWIVIGNQTHSFAVADL 716
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 87/175 (49%), Gaps = 2/175 (1%)
Query: 425 FSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIE 484
+ + A+ ++ LG+ HG+ +++ ++ + + N L+NMY KC + +FD +
Sbjct: 50 YKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMP 109
Query: 485 GRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRN 544
R++IS+NSLISGY G + A+ F E +A +K D T+ AL C + G
Sbjct: 110 ERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGE- 168
Query: 545 LFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLN 599
L + +V + V L+D+ + G L +A + E ++ W +L++
Sbjct: 169 LLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD-ERDQVSWNSLIS 222
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 282 bits (722), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 177/670 (26%), Positives = 316/670 (47%), Gaps = 79/670 (11%)
Query: 56 TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNS 115
+L R LH + + L ++ +Y S+ A K+F+ + L+ + +
Sbjct: 98 SLSHGRLLHDRMRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEM--SELNAVSR-TT 154
Query: 116 IIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELG 175
+I A G + A+ ++ GM G P ++++ + + R +H H + G
Sbjct: 155 MISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAG 214
Query: 176 FRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFK 235
++ + +V MY K G + VGA R+F
Sbjct: 215 LCSNTSIETGIVNMYVKCGWL-------------------------------VGAKRVFD 243
Query: 236 RMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVV 295
+M ++ +P V T L+ + + G + L+LF + T G E + +VV+ CA +
Sbjct: 244 QMAVK--KP--VACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLE 299
Query: 296 EVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALIS 355
E++ ++IH V K G E + V L+D Y K A F +I+
Sbjct: 300 ELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIR------------ 347
Query: 356 SYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQL 415
PN +SWSA+ISG+ EE+++ F+ ++
Sbjct: 348 ----------------------------EPNDVSWSAIISGYCQMSQFEEAVKTFKSLRS 379
Query: 416 AKVKP-NCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFK 474
N T++++ C+ LA N+G ++H A++ + + + LI MY KCG
Sbjct: 380 KNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGCLD 439
Query: 475 KGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACS 534
+ VF++++ D+++W + ISG+ +G AL F++M+ GMKP+ VTF+ L+ACS
Sbjct: 440 DANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACS 499
Query: 535 HAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIW 594
HAGLV G++ M+R++ + PT++HY C++D+ R+GLL EA ++NMP EP+ W
Sbjct: 500 HAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSW 559
Query: 595 GALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKK 654
L+ C THK+ ++ E ++ L+ + T ++L N+Y G+WE++A + ++
Sbjct: 560 KCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEMMKLMNER 619
Query: 655 GLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENYELNSCFNQECI 714
LKK SWI+ + K++ F G+ H E+Y L+E M + ++ N +E +
Sbjct: 620 MLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYEKLKEFDGFMEGDMFQCNMTERREQL 679
Query: 715 YDQSELVLVA 724
D SE + +A
Sbjct: 680 LDHSERLAIA 689
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 112/479 (23%), Positives = 187/479 (39%), Gaps = 80/479 (16%)
Query: 123 HGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRN-HLH 181
H A E M K G ++ + EAC L S S R++H + +G N +
Sbjct: 61 HRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLH-DRMRMGIENPSVL 119
Query: 182 VVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELED 241
+ N ++ MY + +EDA +LFD M +S TM+S YA A +F M
Sbjct: 120 LQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASG 179
Query: 242 WRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSR 301
+P S +T+LL S L+ R +D R
Sbjct: 180 DKPPSSMYTTLLKS---------------LVNPRA--------------------LDFGR 204
Query: 302 EIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESG 361
+IH +VI+ G ++ +++ Y K L A VF + K + L+ Y ++G
Sbjct: 205 QIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAG 264
Query: 362 LCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPN 421
+A L+LF + V+ +
Sbjct: 265 RARDA----------------------------------------LKLFVDLVTEGVEWD 284
Query: 422 CVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFD 481
FS VL CA L LNLG+++H + ++ + VG L++ Y+KC F+ F
Sbjct: 285 SFVFSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQ 344
Query: 482 NIEGRDLISWNSLISGYGMHGLGDNALTTFDEM-IKAGMKPDHVTFVTALSACSHAGLVA 540
I + +SW+++ISGY + A+ TF + K + T+ + ACS
Sbjct: 345 EIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCN 404
Query: 541 AGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLN 599
G + ++ I A L+ + + G L +AN++ +M P+ W A ++
Sbjct: 405 IGGQVHADAIKRSLIGSQYGESA-LITMYSKCGCLDDANEVFESMD-NPDIVAWTAFIS 461
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 109/222 (49%), Gaps = 7/222 (3%)
Query: 47 FITLLQQCSTLQQ---ARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F +L+ C++L++ +Q+H+ + + L+ Y + S A + F +
Sbjct: 288 FSVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEI- 346
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMR-KFGFFPDGFTLPLIIEACSHLGSSS 162
R + W++II FE A++ + +R K + FT I +ACS L +
Sbjct: 347 --REPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCN 404
Query: 163 LCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYA 222
+ VH A++ + + L+ MY K G ++DA ++F+ M I++W +SG+A
Sbjct: 405 IGGQVHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHA 464
Query: 223 FNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDE 264
+ + A R+F++M +PNSVT+ ++L++ GL ++
Sbjct: 465 YYGNASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQ 506
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 281 bits (720), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 167/524 (31%), Positives = 267/524 (50%), Gaps = 49/524 (9%)
Query: 187 VGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNS 246
+ MY KLG A ++ M + +S N +++GY D V A ++F M P+
Sbjct: 1 MSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEM------PDR 54
Query: 247 --VTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIH 304
TW ++++ + +E L LF+ M G L V S A + V ++IH
Sbjct: 55 KLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIH 114
Query: 305 GYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCE 364
GY IK G E L V ++L Y ++ L D V +
Sbjct: 115 GYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSM---------------------- 152
Query: 365 EAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVT 424
P+R N+++W+ +I G A GC E L L++ M+++ +PN +T
Sbjct: 153 -----------------PVR-NLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKIT 194
Query: 425 FSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIE 484
F TVLS C++LA G+++H A++ + V + LI+MY KCG F E
Sbjct: 195 FVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSERE 254
Query: 485 GRDLISWNSLISGYGMHGLGDNALTTFDEMI-KAGMKPDHVTFVTALSACSHAGLVAAGR 543
D + W+S+IS YG HG GD A+ F+ M + M+ + V F+ L ACSH+GL G
Sbjct: 255 DEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGL 314
Query: 544 NLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRT 603
LF MV ++ +P ++HY C+VDLLGRAG L +A I+R+MPI+ + IW LL++C
Sbjct: 315 ELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNI 374
Query: 604 HKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQS 663
HK+ ++ + +IL ++ + ++LL+N++A+ RW D + VR S + K +KK G S
Sbjct: 375 HKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGIS 434
Query: 664 WIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENYELNS 707
W E + +V+ F G+ E+Y L+EL L+M + Y+ ++
Sbjct: 435 WFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYKPDT 478
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 173/368 (47%), Gaps = 44/368 (11%)
Query: 74 RKPFLAAK-LIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEI 132
+K ++++ LI Y R G + +A+KVF+ +P +L WN++I + + E + +
Sbjct: 22 KKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKL---TTWNAMIAGLIQFEFNEEGLSL 78
Query: 133 YVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGK 192
+ M GF PD +TL + + L S S+ + +H + ++ G L V + L MY +
Sbjct: 79 FREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMR 138
Query: 193 LGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSL 252
G+++D + MPVR +++WNT++ G A N ++K M++ RPN +T+ ++
Sbjct: 139 NGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTV 198
Query: 253 LSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGY 312
LSS C+D+ + ++IH IK G
Sbjct: 199 LSS-----------------------------------CSDLAIRGQGQQIHAEAIKIGA 223
Query: 313 EDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQ 372
+ V ++LI Y K LGDA F + ++++ W+++IS+Y G +EA ++
Sbjct: 224 SSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEA----IE 279
Query: 373 LEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM-QLAKVKPNCVTFSTVLSV 431
L ++ + N +++ ++ + G ++ LELF M + KP ++ V+ +
Sbjct: 280 LFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDL 339
Query: 432 CAELAALN 439
L+
Sbjct: 340 LGRAGCLD 347
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 113/257 (43%), Gaps = 24/257 (9%)
Query: 60 ARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRA 119
+Q+H TI + + L +Y R G + + V ++P L WN++I
Sbjct: 110 GQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNL---VAWNTLIMG 166
Query: 120 NVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNH 179
N +G E + +Y M+ G P+ T ++ +CS L + +H A+++G +
Sbjct: 167 NAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSV 226
Query: 180 LHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRM-E 238
+ VV+ L+ MY K G + DA + F + W++M+S Y F+ A +F M E
Sbjct: 227 VAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAE 286
Query: 239 LEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTR--------------------GCE 278
+ N V + +LL + GL D+ LELF +M + GC
Sbjct: 287 QTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCL 346
Query: 279 ISAEALAVVISVCADVV 295
AEA+ + + D+V
Sbjct: 347 DQAEAIIRSMPIKTDIV 363
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 114/243 (46%), Gaps = 14/243 (5%)
Query: 47 FITLLQQCSTLQ---QARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F+T+L CS L Q +Q+H++ I A + + LI++Y++ G + A K F+
Sbjct: 195 FVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFS--- 251
Query: 104 FERLDHIP-LWNSIIRANVSHGYFEFAIEIYVGM-RKFGFFPDGFTLPLIIEACSHLG-S 160
ER D +W+S+I A HG + AIE++ M + + ++ ACSH G
Sbjct: 252 -EREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLK 310
Query: 161 SSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRT-ILSWNTMVS 219
+ + GF+ L +V + G+ G ++ A + MP++T I+ W T++S
Sbjct: 311 DKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLS 370
Query: 220 GYAFNHDCVGASRIFKRMELEDWRPN-SVTWTSLLSSHKRCGLYDETLELFKLMRTRGCE 278
+ + A R+FK E+ PN S + L + H + + E+ K MR + +
Sbjct: 371 ACNIHKNAEMAQRVFK--EILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVK 428
Query: 279 ISA 281
A
Sbjct: 429 KEA 431
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 181/663 (27%), Positives = 315/663 (47%), Gaps = 90/663 (13%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
F+ LL++C ++ Q RQ+ +Q +L + + FL K + L G +++ +F+ E
Sbjct: 40 FLFLLKKCISVNQLRQIQAQMLLHSVEKPNFLIPKAVEL----GDFNYSSFLFSVT--EE 93
Query: 107 LDHIPLWNSIIRA--NVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLC 164
+H +N +IR N + + E A+ +Y M+ G PD FT + AC+ L +
Sbjct: 94 PNHYS-FNYMIRGLTNTWNDH-EAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVG 151
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
R VH ++G +H+ + L+ MY K G++ A +LFD + R
Sbjct: 152 RSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITER--------------- 196
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
++V+W S++S + G + ++LF+ M G E L
Sbjct: 197 --------------------DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTL 236
Query: 285 AVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN 344
++ C+ + ++ R + I F+ + LI Y K L A VF
Sbjct: 237 VSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVF----- 291
Query: 345 KNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGE 404
+Q ++ + ++W+A+I+ ++ G
Sbjct: 292 -----------------------------------NQMIKKDRVAWTAMITVYSQNGKSS 316
Query: 405 ESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLI 464
E+ +LF M+ V P+ T STVLS C + AL LG+++ +A + NI V GL+
Sbjct: 317 EAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLV 376
Query: 465 NMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHV 524
+MY KCG ++ VF+ + ++ +WN++I+ Y G AL FD M + P +
Sbjct: 377 DMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM---SVPPSDI 433
Query: 525 TFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRN 584
TF+ LSAC HAGLV G F++M F + P +EHY ++DLL RAG+L EA + +
Sbjct: 434 TFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMER 493
Query: 585 MPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLN-SQITGSFMLLSNIYAANGRWED 643
P +P+E + A+L +C KD I E+ ++ + ++ G++++ SN+ A W++
Sbjct: 494 FPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNVLADMKMWDE 553
Query: 644 SARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAG-NIVHLGLDEVYVILEELALQMANEN 702
SA++R + +G+ KTPG SWIE+ ++ F AG + + G ++ + + L +M E
Sbjct: 554 SAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDSGSLFDLLVEEMKRER 613
Query: 703 YEL 705
YE
Sbjct: 614 YEF 616
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 123/239 (51%), Gaps = 16/239 (6%)
Query: 44 EDFFITLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFN 100
E +++L CS L+ R L I FL +KLI++Y + G + A++VFN
Sbjct: 233 ERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFN 292
Query: 101 AVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGS 160
+ + D + W ++I +G A +++ M K G PD TL ++ AC +G+
Sbjct: 293 QMI--KKDRVA-WTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGA 349
Query: 161 SSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSG 220
L + + HA EL +++++V LV MYGK GR+E+A ++F+ MPV+ +WN M++
Sbjct: 350 LELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITA 409
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSS-------HKRCGLYDETLELFKLM 272
YA A +F RM + P+ +T+ +LS+ H+ C + E +F L+
Sbjct: 410 YAHQGHAKEALLLFDRMSVP---PSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLV 465
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 175/634 (27%), Positives = 324/634 (51%), Gaps = 87/634 (13%)
Query: 77 FLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIY--- 133
F+ + I++YA G + +++VF++ ER +I +WN++I V + +IE++
Sbjct: 252 FVVSSAISMYAELGDIESSRRVFDSC-VER--NIEVWNTMIGVYVQNDCLVESIELFLEA 308
Query: 134 VGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRN-HLHVVNKLVGMYGK 192
+G ++ D T L A S L L R H + FR + +VN L+ MY +
Sbjct: 309 IGSKEI--VSDEVTYLLAASAVSALQQVELGRQFHGF-VSKNFRELPIVIVNSLMVMYSR 365
Query: 193 LGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSL 252
G + + +F M R ++SWNT +
Sbjct: 366 CGSVHKSFGVFLSMRERDVVSWNT-----------------------------------M 390
Query: 253 LSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGY 312
+S+ + GL DE L L M+ +G +I + ++S +++ + ++ H ++I+ G
Sbjct: 391 ISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG- 449
Query: 313 EDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQ 372
I+ + + S+ LI Y++SGL +
Sbjct: 450 -----------------------------IQFEGMNSY--LIDMYSKSGLIRIS------ 472
Query: 373 LEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVC 432
+K +G + +W+++ISG+ G E++ +FR+M ++PN VT +++L C
Sbjct: 473 -QKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPAC 531
Query: 433 AELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWN 492
+++ +++LG++LHG+++R +D N+ V + L++MY K G K +F + R+ +++
Sbjct: 532 SQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYT 591
Query: 493 SLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVRE 552
++I GYG HG+G+ A++ F M ++G+KPD +TFV LSACS++GL+ G +F +M
Sbjct: 592 TMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREV 651
Query: 553 FRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPN-EYIWGALLNSCRTHKDTKIVE 611
+ I+P+ EHY C+ D+LGR G + EA + V+ + E N +WG+LL SC+ H + ++ E
Sbjct: 652 YNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAE 711
Query: 612 ETASQILTLN--SQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRK 669
+ ++ + +G +LLSN+YA +W+ +VR ++KGLKK G+S IE+
Sbjct: 712 TVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAG 771
Query: 670 KVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
V F + + H E+Y +++ LA M +++
Sbjct: 772 YVNCFVSRDQEHPHSSEIYDVIDGLAKDMRGDSF 805
Score = 146 bits (369), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 134/576 (23%), Positives = 251/576 (43%), Gaps = 78/576 (13%)
Query: 65 SQTILTAAYRKPFLAAKLIALYARFGSVSH------AQKVFNAVPFERLDHIPLWNSIIR 118
+QT ++ + P L + ++ +R + A+++F+A+P LWN+II
Sbjct: 22 NQTRHSSTFSPPTLTPQTPSIRSRLSKICQDGNPQLARQLFDAIP---KPTTVLWNTIII 78
Query: 119 ANVSHGYFEFAIEIYVGMRKFGFFP--DGFTLPLIIEACSHLGSSSLCRIVHCHALELGF 176
+ + A+ Y M+K F D +T ++AC+ + + VHCH +
Sbjct: 79 GFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRC-L 137
Query: 177 RNHLHVV-NKLVGMYGKLGRMEDACQ------LFDGMPVRTILSWNTMVSGYAFNHDCVG 229
+N VV N L+ MY D + +FD M + +++WNT++S Y
Sbjct: 138 QNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAE 197
Query: 230 ASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV--V 287
A R F M + +P+ V++ ++ + + + LM G E + V
Sbjct: 198 ACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKLGDEYVKDLFVVSSA 257
Query: 288 ISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFD-IKNKN 346
IS+ A++ +++ SR + ++ E V N +I Y ++ L ++ +F + I +K
Sbjct: 258 ISMYAELGDIESSRRVFDSCVERNIE----VWNTMIGVYVQNDCLVESIELFLEAIGSKE 313
Query: 347 LES---------------------------------------WNALISSYAESGLCEEAH 367
+ S N+L+ Y+ G ++
Sbjct: 314 IVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVIVNSLMVMYSRCGSVHKSF 373
Query: 368 AVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFST 427
V L + + +V+SW+ +IS F G +E L L MQ K + +T +
Sbjct: 374 GVFLSMRER---------DVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTA 424
Query: 428 VLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFD--NIEG 485
+LS + L +G++ H + +R + + + LI+MY K G + +F+
Sbjct: 425 LLSAASNLRNKEIGKQTHAFLIRQGIQFEGM-NSYLIDMYSKSGLIRISQKLFEGSGYAE 483
Query: 486 RDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNL 545
RD +WNS+ISGY +G + F +M++ ++P+ VT + L ACS G V G+ L
Sbjct: 484 RDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQL 543
Query: 546 FYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI 581
+R++ ++ V + LVD+ +AG ++ A D+
Sbjct: 544 HGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAEDM 578
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 188/398 (47%), Gaps = 54/398 (13%)
Query: 55 STLQQ---ARQLHSQTILTAAYRK-PF-LAAKLIALYARFGSVSHAQKVFNAVPFERLDH 109
S LQQ RQ H ++ +R+ P + L+ +Y+R GSV + VF ++ R
Sbjct: 329 SALQQVELGRQFHG--FVSKNFRELPIVIVNSLMVMYSRCGSVHKSFGVFLSM---RERD 383
Query: 110 IPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHC 169
+ WN++I A V +G + + + M+K GF D T+ ++ A S+L + + + H
Sbjct: 384 VVSWNTMISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHA 443
Query: 170 HALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFD--GMPVRTILSWNTMVSGYAFNHDC 227
+ G + + + L+ MY K G + + +LF+ G R +WN+M+SGY N
Sbjct: 444 FLIRQGIQFE-GMNSYLIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHT 502
Query: 228 VGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVV 287
+F++M ++ RPN+VT S+L +
Sbjct: 503 EKTFLVFRKMLEQNIRPNAVTVASILPA-------------------------------- 530
Query: 288 ISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNL 347
C+ + VD +++HG+ I+ + +FV +AL+D Y K + A ++F K +N
Sbjct: 531 ---CSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNS 587
Query: 348 ESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESL 407
++ +I Y + G+ E A ++ L +++S ++P+ I++ AV+S + G +E L
Sbjct: 588 VTYTTMILGYGQHGMGERAISLFLSMQES-----GIKPDAITFVAVLSACSYSGLIDEGL 642
Query: 408 ELFRRM-QLAKVKPNCVTFSTVLSVCAELAALNLGREL 444
++F M ++ ++P+ + + + + +N E
Sbjct: 643 KIFEEMREVYNIQPSSEHYCCITDMLGRVGRVNEAYEF 680
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 121/256 (47%), Gaps = 30/256 (11%)
Query: 360 SGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVK 419
S +C++ + QL + L P +P + W+ +I GF E+L + RM+
Sbjct: 47 SKICQDGNP---QLARQLFDAIP-KPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPF 102
Query: 420 PNC--VTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKC------G 471
NC T+S+ L CAE L G+ +H + +R L + + +V N L+NMY+ C
Sbjct: 103 TNCDAYTYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCF 162
Query: 472 DFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALS 531
++ VFDN+ +++++WN+LIS Y G A F M++ +KP V+FV
Sbjct: 163 EYDVVRKVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFP 222
Query: 532 ACSHAGLVAAGRNLFYQMVRE---------FRIEPTVEHYACLVDLLGRAGLLQEANDIV 582
A S + + N+FY ++ + F + + YA L D+ E++ V
Sbjct: 223 AVSISRSIKKA-NVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDI--------ESSRRV 273
Query: 583 RNMPIEPNEYIWGALL 598
+ +E N +W ++
Sbjct: 274 FDSCVERNIEVWNTMI 289
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
Query: 49 TLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
++L CS ++ +QLH +I + F+A+ L+ +Y++ G++ +A+ +F+ E
Sbjct: 526 SILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTK-E 584
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLG 159
R + + ++I HG E AI +++ M++ G PD T ++ ACS+ G
Sbjct: 585 R--NSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSG 636
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 281 bits (719), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 155/522 (29%), Positives = 278/522 (53%), Gaps = 61/522 (11%)
Query: 199 ACQLFDGMPVRTILSWNTMVSGYAFNHD---CVGASRIFKRMELEDWRPNSVTWTSLLSS 255
A ++F+ MP R SWNT++ G++ + + + + ++ M E PN T+ S+L +
Sbjct: 78 AHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKA 137
Query: 256 HKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDY 315
CA ++ ++IHG +K G+
Sbjct: 138 -----------------------------------CAKTGKIQEGKQIHGLALKYGFGGD 162
Query: 316 LFVKNALIDTYRKHKHLGDAHNVFF------------DIKNKNLES--WNALISSYAESG 361
FV + L+ Y + DA +F+ D + ++ E WN +I Y G
Sbjct: 163 EFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLG 222
Query: 362 LCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPN 421
C+ A + ++ + +V+SW+ +ISG++ G ++++E+FR M+ ++PN
Sbjct: 223 DCKAARMLFDKMRQR---------SVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPN 273
Query: 422 CVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFD 481
VT +VL + L +L LG LH YA + + + ++G+ LI+MY KCG +K VF+
Sbjct: 274 YVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFE 333
Query: 482 NIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAA 541
+ ++I+W+++I+G+ +HG +A+ F +M +AG++P V ++ L+ACSH GLV
Sbjct: 334 RLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEE 393
Query: 542 GRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSC 601
GR F QMV +EP +EHY C+VDLLGR+GLL EA + + NMPI+P++ IW ALL +C
Sbjct: 394 GRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGAC 453
Query: 602 RTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPG 661
R + ++ + A+ ++ + +G+++ LSN+YA+ G W + + +R+ K+K ++K PG
Sbjct: 454 RMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPG 513
Query: 662 QSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
S I++ ++ F + H E+ +L E++ ++ Y
Sbjct: 514 CSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGY 555
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 123/525 (23%), Positives = 210/525 (40%), Gaps = 106/525 (20%)
Query: 51 LQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYA----RFGSVSHAQKVFNAVPFER 106
+ C T++ Q+H+ I + R AA+++ A + +A K+FN +P
Sbjct: 30 INNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQR- 88
Query: 107 LDHIPLWNSIIR--ANVSHGYFEFAIEIYVGMRKFGFF-PDGFTLPLIIEACSHLGSSSL 163
+ WN+IIR + AI ++ M F P+ FT P +++AC+ G
Sbjct: 89 --NCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQE 146
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLF------DGMPVRT------- 210
+ +H AL+ GF V++ LV MY G M+DA LF M V T
Sbjct: 147 GKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDG 206
Query: 211 -ILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELF 269
I+ WN M+ GY DC A +F +M + + V+W +++S + G + + +E+F
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMR----QRSVVSWNTMISGYSLNGFFKDAVEVF 262
Query: 270 KLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKH 329
+ M+ + L V+ + + ++ +H Y G + +ALID Y K
Sbjct: 263 REMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKC 322
Query: 330 KHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVIS 389
+ A +VF + +N+ +W+A+I
Sbjct: 323 GIIEKAIHVFERLPRENVITWSAMI----------------------------------- 347
Query: 390 WSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAV 449
+GFA G ++++ F +M+ A V+P+ V + +L+ C+ + GR V
Sbjct: 348 -----NGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMV 402
Query: 450 RNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALT 509
D +E R + + ++ G GL D A
Sbjct: 403 S-----------------------------VDGLEPR-IEHYGCMVDLLGRSGLLDEA-- 430
Query: 510 TFDEMI-KAGMKPDHVTFVTALSACSHAGLVAAGR---NLFYQMV 550
+E I +KPD V + L AC G V G+ N+ MV
Sbjct: 431 --EEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMV 473
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 141/298 (47%), Gaps = 10/298 (3%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGF 141
+I Y R G A+ +F+ + R + WN++I +G+F+ A+E++ M+K
Sbjct: 214 MIDGYMRLGDCKAARMLFDKM---RQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDI 270
Query: 142 FPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQ 201
P+ TL ++ A S LGS L +H +A + G R + + L+ MY K G +E A
Sbjct: 271 RPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIH 330
Query: 202 LFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGL 261
+F+ +P +++W+ M++G+A + A F +M RP+ V + +LL++ GL
Sbjct: 331 VFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGL 390
Query: 262 YDETLELF-KLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKN 320
+E F +++ G E E ++ + +D + E +++ + +
Sbjct: 391 VEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEE---FILNMPIKPDDVIWK 447
Query: 321 ALIDTYRKHKHL---GDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEK 375
AL+ R ++ N+ D+ + ++ AL + YA G E + L++++
Sbjct: 448 ALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKE 505
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 281 bits (718), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 187/617 (30%), Positives = 293/617 (47%), Gaps = 50/617 (8%)
Query: 49 TLLQQCSTLQQ---ARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
+LL C + +QLH+ I + L KL+ Y+ F + AQ + E
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENS--E 145
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCR 165
L +P WN +I + + + F+ ++ +Y M G D FT P +I+AC+ L + R
Sbjct: 146 ILHPLP-WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGR 204
Query: 166 IVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNH 225
+VH R +L+V N L+ MY + G+++ A +LFD M R +SWN +++ Y
Sbjct: 205 VVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 226 DCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALA 285
A ++ RM L + VTW ++ G Y L MR I + A+
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 286 VVISVCADVVEVDRSREIHGYVIKGGY--EDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
+ C+ + + + H VI+ D V+N+LI Y + L A VF ++
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVE 384
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
+L + W+++ISGFA
Sbjct: 385 ANSLST----------------------------------------WNSIISGFAYNERS 404
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVR-NLMDDNILVGNG 462
EE+ L + M L+ PN +T +++L + A + L G+E H Y +R D +++ N
Sbjct: 405 EETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNS 464
Query: 463 LINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPD 522
L++MY K G+ VFD++ RD +++ SLI GYG G G+ AL F +M ++G+KPD
Sbjct: 465 LVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPD 524
Query: 523 HVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIV 582
HVT V LSACSH+ LV G LF +M F I +EHY+C+VDL RAG L +A DI
Sbjct: 525 HVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIF 584
Query: 583 RNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQ-ILTLNSQITGSFMLLSNIYAANGRW 641
+P EP+ + LL +C H +T I E A + +L + G +MLL+++YA G W
Sbjct: 585 HTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSW 644
Query: 642 EDSARVRISAKKKGLKK 658
V+ G++K
Sbjct: 645 SKLVTVKTLLSDLGVQK 661
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 112/291 (38%), Gaps = 45/291 (15%)
Query: 252 LLSSHKRC---GLYDETLELFKLMRTRGC--EISAEALAVVISVCADVVEVDRSREIHGY 306
L +S + C G E F L+R + E + A ++S C E +++H +
Sbjct: 49 LFNSFRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAH 108
Query: 307 VIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEA 366
I G E + L+ Y L +A + + + + WN LI SY + +E+
Sbjct: 109 CISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQES 168
Query: 367 HAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFS 426
+V ++RM ++ + T+
Sbjct: 169 VSV----------------------------------------YKRMMSKGIRADEFTYP 188
Query: 427 TVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGR 486
+V+ CA L GR +HG + N+ V N LI+MY + G +FD + R
Sbjct: 189 SVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSER 248
Query: 487 DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAG 537
D +SWN++I+ Y A D M +G++ VT+ T C AG
Sbjct: 249 DAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 281 bits (718), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 187/617 (30%), Positives = 293/617 (47%), Gaps = 50/617 (8%)
Query: 49 TLLQQCSTLQQ---ARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
+LL C + +QLH+ I + L KL+ Y+ F + AQ + E
Sbjct: 88 SLLSTCVGFNEFVPGQQLHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENS--E 145
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCR 165
L +P WN +I + + + F+ ++ +Y M G D FT P +I+AC+ L + R
Sbjct: 146 ILHPLP-WNVLIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGR 204
Query: 166 IVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNH 225
+VH R +L+V N L+ MY + G+++ A +LFD M R +SWN +++ Y
Sbjct: 205 VVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEE 264
Query: 226 DCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALA 285
A ++ RM L + VTW ++ G Y L MR I + A+
Sbjct: 265 KLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMI 324
Query: 286 VVISVCADVVEVDRSREIHGYVIKGGY--EDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
+ C+ + + + H VI+ D V+N+LI Y + L A VF ++
Sbjct: 325 NGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVE 384
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
+L + W+++ISGFA
Sbjct: 385 ANSLST----------------------------------------WNSIISGFAYNERS 404
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVR-NLMDDNILVGNG 462
EE+ L + M L+ PN +T +++L + A + L G+E H Y +R D +++ N
Sbjct: 405 EETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNS 464
Query: 463 LINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPD 522
L++MY K G+ VFD++ RD +++ SLI GYG G G+ AL F +M ++G+KPD
Sbjct: 465 LVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSGIKPD 524
Query: 523 HVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIV 582
HVT V LSACSH+ LV G LF +M F I +EHY+C+VDL RAG L +A DI
Sbjct: 525 HVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKARDIF 584
Query: 583 RNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQ-ILTLNSQITGSFMLLSNIYAANGRW 641
+P EP+ + LL +C H +T I E A + +L + G +MLL+++YA G W
Sbjct: 585 HTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAVTGSW 644
Query: 642 EDSARVRISAKKKGLKK 658
V+ G++K
Sbjct: 645 SKLVTVKTLLSDLGVQK 661
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 112/291 (38%), Gaps = 45/291 (15%)
Query: 252 LLSSHKRC---GLYDETLELFKLMRTRGC--EISAEALAVVISVCADVVEVDRSREIHGY 306
L +S + C G E F L+R + E + A ++S C E +++H +
Sbjct: 49 LFNSFRHCISHGQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAH 108
Query: 307 VIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEA 366
I G E + L+ Y L +A + + + + WN LI SY + +E+
Sbjct: 109 CISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQES 168
Query: 367 HAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFS 426
+V ++RM ++ + T+
Sbjct: 169 VSV----------------------------------------YKRMMSKGIRADEFTYP 188
Query: 427 TVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGR 486
+V+ CA L GR +HG + N+ V N LI+MY + G +FD + R
Sbjct: 189 SVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRMSER 248
Query: 487 DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAG 537
D +SWN++I+ Y A D M +G++ VT+ T C AG
Sbjct: 249 DAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 280 bits (715), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 141/397 (35%), Positives = 227/397 (57%), Gaps = 14/397 (3%)
Query: 303 IHGYVIKGGYEDYLFVKNALIDTYRKH-KHLGDAHNVFFDIKNKNLESWNALISSYAESG 361
+H ++ K G+ Y+ V+ AL+ +Y H+ A +F ++ +N+ SW A++S YA SG
Sbjct: 148 VHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSG 207
Query: 362 LCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM-QLAKVKP 420
A A+ + P R +V SW+A+++ G E++ LFRRM ++P
Sbjct: 208 DISNAVALFEDM--------PER-DVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRP 258
Query: 421 NCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVF 480
N VT VLS CA+ L L + +H +A R + ++ V N L+++Y KCG+ ++ VF
Sbjct: 259 NEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVF 318
Query: 481 DNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGM---KPDHVTFVTALSACSHAG 537
+ L +WNS+I+ + +HG + A+ F+EM+K + KPDH+TF+ L+AC+H G
Sbjct: 319 KMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGG 378
Query: 538 LVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGAL 597
LV+ GR F M F IEP +EHY CL+DLLGRAG EA +++ M ++ +E IWG+L
Sbjct: 379 LVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSL 438
Query: 598 LNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLK 657
LN+C+ H + E ++ LN G +++N+Y G WE++ R R K +
Sbjct: 439 LNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAY 498
Query: 658 KTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEEL 694
K PG S IE+ +V+ F + + H +E+Y+IL+ L
Sbjct: 499 KPPGWSRIEIDNEVHQFYSLDKSHPETEEIYMILDSL 535
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 119/505 (23%), Positives = 220/505 (43%), Gaps = 74/505 (14%)
Query: 45 DFFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYA-RFGSVSHAQKVFNAVP 103
F ++ + L +Q+ S I++ FL KL+ R ++S+A+ +F+
Sbjct: 25 QFISAVISKSRHLNHLKQVQSFMIVSGLSHSHFLCFKLLRFCTLRLCNLSYARFIFDRFS 84
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFF----------PDGFTLPLIIE 153
F L+ +++ A + ++ ++ F FF P+ F PL+++
Sbjct: 85 FPNTH---LYAAVLTA------YSSSLPLHAS-SAFSFFRLMVNRSVPRPNHFIYPLVLK 134
Query: 154 ACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGK-LGRMEDACQLFDGMPVRTIL 212
+ +L S+ +VH H + GF ++ V L+ Y + + A QLFD M R ++
Sbjct: 135 STPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVV 194
Query: 213 SWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLM 272
SW M+SGYA + D A +F+ M D +W ++L++ + GL+ E + LF+ M
Sbjct: 195 SWTAMLSGYARSGDISNAVALFEDMPERD----VPSWNAILAACTQNGLFLEAVSLFRRM 250
Query: 273 RTRGCEISAEALAV-VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKH 331
E V V+S CA + ++ IH + + +FV N+L+D Y K +
Sbjct: 251 INEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGN 310
Query: 332 LGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWS 391
L +A +VF K+L +WN++I+ +A G EEA AV ++ K
Sbjct: 311 LEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMK---------------- 354
Query: 392 AVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGY---- 447
+ + +KP+ +TF +L+ C ++ GR GY
Sbjct: 355 ---------------------LNINDIKPDHITFIGLLNACTHGGLVSKGR---GYFDLM 390
Query: 448 AVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGR-DLISWNSLISGYGMHGLGDN 506
R ++ I LI++ + G F + V ++ + D W SL++ +HG D
Sbjct: 391 TNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSLLNACKIHGHLDL 450
Query: 507 ALTTFDEMIKAGMKPDHVTFVTALS 531
A ++ + P++ +V ++
Sbjct: 451 AEVAVKNLV--ALNPNNGGYVAMMA 473
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 278 bits (711), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 182/633 (28%), Positives = 294/633 (46%), Gaps = 89/633 (14%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYF-----EFAIEIYVGM 136
L++LYA+ G + A K+F D +P+ + I + V +G+ E + M
Sbjct: 96 LLSLYAKCGKLVDAIKLF--------DEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM 147
Query: 137 RKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRM 196
G F D TL +++ C + +++H A+ G+ + V NKL+ Y K G
Sbjct: 148 LGSGGF-DHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCS 206
Query: 197 EDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSH 256
+FDGM R +++ ++SG N
Sbjct: 207 VSGRGVFDGMSHRNVITLTAVISGLIENE------------------------------- 235
Query: 257 KRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYL 316
L+++ L LF LMR ++ ++ C+ + ++IH + K G E L
Sbjct: 236 ----LHEDGLRLFSLMRRGLVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESEL 291
Query: 317 FVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKS 376
+++AL+D Y K + DA +F ES +
Sbjct: 292 CIESALMDMYSKCGSIEDAWTIF--------ESTTEV----------------------- 320
Query: 377 LDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELA 436
+ +S + ++ G A G EE+++ F RM A V+ + S VL V
Sbjct: 321 ---------DEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDN 371
Query: 437 ALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLIS 496
+L LG++LH ++ N V NGLINMY KCGD VF + R+ +SWNS+I+
Sbjct: 372 SLGLGKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIA 431
Query: 497 GYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIE 556
+ HG G AL ++EM +KP VTF++ L ACSH GL+ GR L +M IE
Sbjct: 432 AFARHGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIE 491
Query: 557 PTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQ 616
P EHY C++D+LGRAGLL+EA + ++P++P+ IW ALL +C H DT++ E A Q
Sbjct: 492 PRTEHYTCIIDMLGRAGLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQ 551
Query: 617 ILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSA 676
+ + + +L++NIY++ G+W++ A+ K G+ K G S IE+ K ++F
Sbjct: 552 LFQTAPDSSSAHILIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVV 611
Query: 677 GNIVHLGLDEVYVILEELALQMANENYELNSCF 709
+ +H + +Y +L L M +E Y + F
Sbjct: 612 EDKLHPQAEAIYDVLSGLFPVMVDEGYRPDKRF 644
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/429 (22%), Positives = 176/429 (41%), Gaps = 80/429 (18%)
Query: 177 RNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKR 236
RN L V N L+ +Y K G++ DA +LFD MP+R ++S N + G+ N + + KR
Sbjct: 87 RNALVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKR 146
Query: 237 MELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVE 296
+L S G +D L +V+SVC
Sbjct: 147 ---------------MLGS----GGFDHA-----------------TLTIVLSVCDTPEF 170
Query: 297 VDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISS 356
++ IH I GY+ + V N LI +Y K VF + ++N+ + A+IS
Sbjct: 171 CLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISG 230
Query: 357 YAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLA 416
E+ E H E+ L LF M+
Sbjct: 231 LIEN----ELH------------------------------------EDGLRLFSLMRRG 250
Query: 417 KVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKG 476
V PN VT+ + L+ C+ + G+++H + ++ + + + L++MY KCG +
Sbjct: 251 LVHPNSVTYLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDA 310
Query: 477 HLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHA 536
+F++ D +S ++ G +G + A+ F M++AG++ D L
Sbjct: 311 WTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFID 370
Query: 537 GLVAAGRNLFYQMV-REFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWG 595
+ G+ L ++ R+F V + L+++ + G L ++ + R MP + N W
Sbjct: 371 NSLGLGKQLHSLVIKRKFSGNTFVNN--GLINMYSKCGDLTDSQTVFRRMP-KRNYVSWN 427
Query: 596 ALLNSCRTH 604
+++ + H
Sbjct: 428 SMIAAFARH 436
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 122/238 (51%), Gaps = 11/238 (4%)
Query: 341 DIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASK 400
DI L WN+L+S YA+ G +A + ++ P+R +VIS + V GF
Sbjct: 84 DIHRNALVVWNSLLSLYAKCGKLVDAIKLFDEM--------PMR-DVISQNIVFYGFLRN 134
Query: 401 GCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVG 460
E L +RM L + T + VLSVC + + +H A+ + D I VG
Sbjct: 135 RETESGFVLLKRM-LGSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVG 193
Query: 461 NGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMK 520
N LI Y KCG G VFD + R++I+ ++ISG + L ++ L F M + +
Sbjct: 194 NKLITSYFKCGCSVSGRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVH 253
Query: 521 PDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEA 578
P+ VT+++AL+ACS + + G+ + + ++ ++ IE + + L+D+ + G +++A
Sbjct: 254 PNSVTYLSALAACSGSQRIVEGQQI-HALLWKYGIESELCIESALMDMYSKCGSIEDA 310
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 117/248 (47%), Gaps = 7/248 (2%)
Query: 47 FITLLQQCSTLQ---QARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
+++ L CS Q + +Q+H+ + + + L+ +Y++ GS+ A +F +
Sbjct: 259 YLSALAACSGSQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTT 318
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
+D + + I+ +G E AI+ ++ M + G D + ++ S L
Sbjct: 319 --EVDEVSM-TVILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGL 375
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
+ +H ++ F + V N L+ MY K G + D+ +F MP R +SWN+M++ +A
Sbjct: 376 GKQLHSLVIKRKFSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFAR 435
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMR-TRGCEISAE 282
+ + A ++++ M + +P VT+ SLL + GL D+ EL M+ G E E
Sbjct: 436 HGHGLAALKLYEEMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTE 495
Query: 283 ALAVVISV 290
+I +
Sbjct: 496 HYTCIIDM 503
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 277 bits (708), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 180/618 (29%), Positives = 293/618 (47%), Gaps = 85/618 (13%)
Query: 91 SVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPL 150
S +A KVF+ + L+ + W +I + G+ AI ++ M GF D FTL
Sbjct: 218 SFENAYKVFDKM--SELN-VVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSS 274
Query: 151 IIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKL---GRMEDACQLFDGMP 207
+ AC+ L + SL + +H A+ G + + LV MY K G ++D ++FD M
Sbjct: 275 VFSACAELENLSLGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRME 332
Query: 208 VRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSH-KRCGLYDETL 266
+++S WT+L++ + K C L E +
Sbjct: 333 DHSVMS-----------------------------------WTALITGYMKNCNLATEAI 357
Query: 267 ELFKLMRTRG-CEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDT 325
LF M T+G E + + C ++ + +++ G K G V N++I
Sbjct: 358 NLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISM 417
Query: 326 YRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRP 385
+ K + DA F + KNL S+N + G C +
Sbjct: 418 FVKSDRMEDAQRAFESLSEKNLVSYNTFLD-----GTCRNLNF----------------- 455
Query: 386 NVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELH 445
E++ +L + ++ + TF+++LS A + ++ G ++H
Sbjct: 456 ------------------EQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIH 497
Query: 446 GYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGD 505
V+ + N V N LI+MY KCG VF+ +E R++ISW S+I+G+ HG
Sbjct: 498 SQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAI 557
Query: 506 NALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACL 565
L TF++MI+ G+KP+ VT+V LSACSH GLV+ G F M + +I+P +EHYAC+
Sbjct: 558 RVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACM 617
Query: 566 VDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQIT 625
VDLL RAGLL +A + + MP + + +W L +CR H +T++ + A +IL L+
Sbjct: 618 VDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEP 677
Query: 626 GSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLD 685
+++ LSNIYA G+WE+S +R K++ L K G SWIEV K++ F G+ H
Sbjct: 678 AAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAH 737
Query: 686 EVYVILEELALQMANENY 703
++Y L+ L ++ Y
Sbjct: 738 QIYDELDRLITEIKRCGY 755
Score = 119 bits (298), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 127/584 (21%), Positives = 243/584 (41%), Gaps = 93/584 (15%)
Query: 47 FITLLQQC---STLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F +LL+ C + + +H++ I L LI+LY++ G + A+ VF +
Sbjct: 65 FSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETMR 124
Query: 104 -FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSS 162
F + D + W++++ ++G AI+++V + G P+ + +I ACS+
Sbjct: 125 RFGKRDVVS-WSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 163 LCRIVHCHALELG-FRNHLHVVNKLVGMYGK-LGRMEDACQLFDGMPVRTILSWNTMVSG 220
+ R+ ++ G F + + V L+ M+ K E+A ++FD M
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS------------- 230
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEIS 280
EL N VTWT +++ + G E + F M G E
Sbjct: 231 -----------------EL-----NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESD 268
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLG---DAHN 337
L+ V S CA++ + +++H + I+ G D V+ +L+D Y K G D
Sbjct: 269 KFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRK 326
Query: 338 VFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGF 397
VF +++ ++ SW ALI+ Y ++ C A
Sbjct: 327 VFDRMEDHSVMSWTALITGYMKN--CNLA------------------------------- 353
Query: 398 ASKGCGEESLELFRRM-QLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDN 456
E++ LF M V+PN TFS+ C L+ +G+++ G A + + N
Sbjct: 354 ------TEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASN 407
Query: 457 ILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIK 516
V N +I+M++K + F+++ ++L+S+N+ + G + + A E+ +
Sbjct: 408 SSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITE 467
Query: 517 AGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYAC--LVDLLGRAGL 574
+ TF + LS ++ G + G + Q+V ++ + C L+ + + G
Sbjct: 468 RELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV---KLGLSCNQPVCNALISMYSKCGS 524
Query: 575 LQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQIL 618
+ A+ + M N W +++ H V ET +Q++
Sbjct: 525 IDTASRVFNFME-NRNVISWTSMITGFAKHGFAIRVLETFNQMI 567
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 169/382 (44%), Gaps = 56/382 (14%)
Query: 49 TLLQQCSTLQQ---ARQLHSQTILTAAYRKPFLAAKLIALYARF---GSVSHAQKVFNAV 102
++ C+ L+ +QLHS I + + L+ +YA+ GSV +KVF+ +
Sbjct: 274 SVFSACAELENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRM 331
Query: 103 PFERLDH-IPLWNSIIRANVSHGYFEF-AIEIYVGMRKFGFF-PDGFTLPLIIEACSHLG 159
DH + W ++I + + AI ++ M G P+ FT +AC +L
Sbjct: 332 E----DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLS 387
Query: 160 SSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVS 219
+ + V A + G ++ V N ++ M+ K RMEDA + F+ + + ++S+NT +
Sbjct: 388 DPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLD 447
Query: 220 GYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEI 279
G N + +++ +L + R +
Sbjct: 448 GTCRNLN-----------------------------------FEQAFKLLSEITERELGV 472
Query: 280 SAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVF 339
SA A ++S A+V + + +IH V+K G V NALI Y K + A VF
Sbjct: 473 SAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVF 532
Query: 340 FDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFAS 399
++N+N+ SW ++I+ +A+ G A VL + ++ + ++PN +++ A++S +
Sbjct: 533 NFMENRNVISWTSMITGFAKHGF---AIRVLETFNQMIE--EGVKPNEVTYVAILSACSH 587
Query: 400 KGCGEESLELFRRM-QLAKVKP 420
G E F M + K+KP
Sbjct: 588 VGLVSEGWRHFNSMYEDHKIKP 609
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 108/231 (46%), Gaps = 10/231 (4%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPF-----LAAKLIALYARFGSVSHAQKVFNA 101
F + + C L R + +L A+++ +A +I+++ + + AQ+ F +
Sbjct: 376 FSSAFKACGNLSDPRV--GKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFES 433
Query: 102 VPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSS 161
+ + L +N+ + + FE A ++ + + FT ++ +++GS
Sbjct: 434 LSEKNLVS---YNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSI 490
Query: 162 SLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGY 221
+H ++LG + V N L+ MY K G ++ A ++F+ M R ++SW +M++G+
Sbjct: 491 RKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGF 550
Query: 222 AFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLM 272
A + + F +M E +PN VT+ ++LS+ GL E F M
Sbjct: 551 AKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSM 601
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 93/189 (49%), Gaps = 6/189 (3%)
Query: 418 VKP-NCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKG 476
++P + VTFS++L C LG+ +H + ++ + ++ N LI++Y K GD K
Sbjct: 57 IRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKA 116
Query: 477 HLVFDNIE---GRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSAC 533
VF+ + RD++SW+++++ YG +G +A+ F E ++ G+ P+ + + AC
Sbjct: 117 EDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRAC 176
Query: 534 SHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRA-GLLQEANDIVRNMPIEPNEY 592
S++ V GR +++ E V L+D+ + + A + M E N
Sbjct: 177 SNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMS-ELNVV 235
Query: 593 IWGALLNSC 601
W ++ C
Sbjct: 236 TWTLMITRC 244
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 276 bits (707), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 167/563 (29%), Positives = 287/563 (50%), Gaps = 80/563 (14%)
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHD 226
VH H ++ + ++ +L+ YGK +EDA ++ D MP +
Sbjct: 74 VHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK----------------- 116
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELF-KLMRTRGCEISAEALA 285
N V+WT+++S + + G E L +F ++MR+ G + + A
Sbjct: 117 ------------------NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDG-KPNEFTFA 157
Query: 286 VVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK 345
V++ C + ++IHG ++K Y+ ++FV ++L+D Y
Sbjct: 158 TVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMY------------------- 198
Query: 346 NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEE 405
A++G +EA + L P R +V+S +A+I+G+A G EE
Sbjct: 199 ------------AKAGQIKEAREIFECL--------PER-DVVSCTAIIAGYAQLGLDEE 237
Query: 406 SLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLIN 465
+LE+F R+ + PN VT++++L+ + LA L+ G++ H + +R + ++ N LI+
Sbjct: 238 ALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLID 297
Query: 466 MYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMI-KAGMKPDHV 524
MY KCG+ +FDN+ R ISWN+++ GY HGLG L F M + +KPD V
Sbjct: 298 MYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAV 357
Query: 525 TFVTALSACSHAGLVAAGRNLFYQMVR-EFRIEPTVEHYACLVDLLGRAGLLQEANDIVR 583
T + LS CSH + G N+F MV E+ +P EHY C+VD+LGRAG + EA + ++
Sbjct: 358 TLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAFEFIK 417
Query: 584 NMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWED 643
MP +P + G+LL +CR H I E +++ + + G++++LSN+YA+ GRW D
Sbjct: 418 RMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAGRWAD 477
Query: 644 SARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
VR +K + K PG+SWI+ + ++ F A + H +EV ++E++++M Y
Sbjct: 478 VNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKMKQAGY 537
Query: 704 ELN-SCFNQECIYDQSELVLVAN 725
+ SC + +Q E +L+ +
Sbjct: 538 VPDLSCVLYDVDEEQKEKMLLGH 560
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 146/290 (50%), Gaps = 25/290 (8%)
Query: 319 KNALIDTYRKHKHLGDAHNVFFDIKNKNLESW---NALISSYAESGLCEEAHAVLLQLEK 375
K AL D R H H+ IK + L + L+ Y + E+A VL ++ +
Sbjct: 65 KRALRDGQRVHAHM---------IKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPE 115
Query: 376 SLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAEL 435
NV+SW+A+IS ++ G E+L +F M + KPN TF+TVL+ C
Sbjct: 116 K---------NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRA 166
Query: 436 AALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLI 495
+ L LG+++HG V+ D +I VG+ L++MY K G K+ +F+ + RD++S ++I
Sbjct: 167 SGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAII 226
Query: 496 SGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMV-REFR 554
+GY GL + AL F + GM P++VT+ + L+A S L+ G+ ++ RE
Sbjct: 227 AGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELP 286
Query: 555 IEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTH 604
+++ L+D+ + G L A + NMP E W A+L H
Sbjct: 287 FYAVLQN--SLIDMYSKCGNLSYARRLFDNMP-ERTAISWNAMLVGYSKH 333
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/370 (22%), Positives = 173/370 (46%), Gaps = 45/370 (12%)
Query: 47 FITLLQQC---STLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
+ LL C L+ +++H+ I T +L +L+ Y + + A+KV + +P
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
+ ++ W ++I G+ A+ ++ M + P+ FT ++ +C L
Sbjct: 115 EK---NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGL 171
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
+ +H ++ + +H+ V + L+ MY K G++++A ++F+ +P R ++S +++GYA
Sbjct: 172 GKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQ 231
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
A +F R+ E PN VT+ SLL++ +S A
Sbjct: 232 LGLDEEALEMFHRLHSEGMSPNYVTYASLLTA-----------------------LSGLA 268
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
L +D ++ H +V++ Y ++N+LID Y K +L A +F ++
Sbjct: 269 L------------LDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP 316
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
+ SWNA++ Y++ GL E +L+L + + + ++P+ ++ AV+SG +
Sbjct: 317 ERTAISWNAMLVGYSKHGLGRE----VLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRME 372
Query: 404 EESLELFRRM 413
+ L +F M
Sbjct: 373 DTGLNIFDGM 382
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 154/353 (43%), Gaps = 19/353 (5%)
Query: 47 FITLLQQC---STLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F T+L C S L +Q+H + F+ + L+ +YA+ G + A+++F +P
Sbjct: 156 FATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLP 215
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
ER + +II G E A+E++ + G P+ T ++ A S L
Sbjct: 216 -ER--DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDH 272
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
+ HCH L + + N L+ MY K G + A +LFD MP RT +SWN M+ GY+
Sbjct: 273 GKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSK 332
Query: 224 NHDCVGASRIFKRMELEDW-RPNSVTWTSLLSSHKRCGLYDETLELFKLMRT--RGCEIS 280
+ +F+ M E +P++VT ++LS + D L +F M G +
Sbjct: 333 HGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPG 392
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNV-- 338
E ++ + +D + E ++ + + V +L+ R H + +V
Sbjct: 393 TEHYGCIVDMLGRAGRIDEAFE---FIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGR 449
Query: 339 -FFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISW 390
+I+ +N ++ L + YA +G + + V + + +P R SW
Sbjct: 450 RLIEIEPENAGNYVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGR----SW 498
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 98/195 (50%), Gaps = 8/195 (4%)
Query: 394 ISGFASKGCGEESLELFRRMQLAKVKPNCV--TFSTVLSVCAELAALNLGRELHGYAVRN 451
IS S G +E+L +++A + P + +L+ C + AL G+ +H + ++
Sbjct: 27 ISQLCSNGRLQEAL-----LEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKT 81
Query: 452 LMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTF 511
+ L+ Y KC + V D + ++++SW ++IS Y G ALT F
Sbjct: 82 RYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVF 141
Query: 512 DEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGR 571
EM+++ KP+ TF T L++C A + G+ + + ++ ++ + + + L+D+ +
Sbjct: 142 AEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQI-HGLIVKWNYDSHIFVGSSLLDMYAK 200
Query: 572 AGLLQEANDIVRNMP 586
AG ++EA +I +P
Sbjct: 201 AGQIKEAREIFECLP 215
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 276 bits (706), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 185/630 (29%), Positives = 296/630 (46%), Gaps = 96/630 (15%)
Query: 80 AKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRK- 138
K + + A + +A+K+F+ P +R D L NS+I+A + + + +Y +RK
Sbjct: 14 TKFLVISASAVGIGYARKLFDQRP-QRDDSF-LSNSMIKAYLETRQYPDSFALYRDLRKE 71
Query: 139 FGFFPDGFTLPLIIEACSHLGSSSLCRI----VHCHALELGFRNHLHVVNKLVGMYGKLG 194
F PD FT + ++CS S+C +H GF ++V +V MY K G
Sbjct: 72 TCFAPDNFTFTTLTKSCS----LSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFG 127
Query: 195 RMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLS 254
+M A FD MP R+ V+WT+L+S
Sbjct: 128 KMGCARNAFDEMPHRS-----------------------------------EVSWTALIS 152
Query: 255 SHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYED 314
+ RCG D +LF M DVV
Sbjct: 153 GYIRCGELDLASKLFDQM----------------PHVKDVV------------------- 177
Query: 315 YLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLE 374
+ NA++D + K + A +F ++ +K + +W +I Y + A
Sbjct: 178 ---IYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAA-------- 226
Query: 375 KSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQ-LAKVKPNCVTFSTVLSVCA 433
+ L P R N++SW+ +I G+ +E + LF+ MQ + P+ VT +VL +
Sbjct: 227 RKLFDAMPER-NLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAIS 285
Query: 434 ELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNS 493
+ AL+LG H + R +D + V +++MY KCG+ +K +FD + + + SWN+
Sbjct: 286 DTGALSLGEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNA 345
Query: 494 LISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREF 553
+I GY ++G AL F M+ KPD +T + ++AC+H GLV GR F+ M RE
Sbjct: 346 MIHGYALNGNARAALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKWFHVM-REM 403
Query: 554 RIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEET 613
+ +EHY C+VDLLGRAG L+EA D++ NMP EPN I + L++C +KD + E
Sbjct: 404 GLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERI 463
Query: 614 ASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYT 673
+ + L Q G+++LL N+YAA+ RW+D V+ +K KK G S IE+ V
Sbjct: 464 LKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSE 523
Query: 674 FSAGNIVHLGLDEVYVILEELALQMANENY 703
F +G+ H ++++L +L + M E Y
Sbjct: 524 FISGDTTHPHRRSIHLVLGDLLMHMNEEKY 553
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 113/265 (42%), Gaps = 24/265 (9%)
Query: 48 ITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERL 107
++L + C Q ++L + + A ++ +Y++ G + A+++F+ +P ++
Sbjct: 290 LSLGEWCHCFVQRKKLDKKVKVCTA---------ILDMYSKCGEIEKAKRIFDEMPEKQ- 339
Query: 108 DHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIV 167
+ WN++I +G A++++V M PD T+ +I AC+H G R
Sbjct: 340 --VASWNAMIHGYALNGNARAALDLFVTMM-IEEKPDEITMLAVITACNHGGLVEEGRKW 396
Query: 168 HCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRT---ILSWNTMVSGYAFN 224
E+G + +V + G+ G +++A L MP ILS + +S
Sbjct: 397 FHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILS--SFLSACGQY 454
Query: 225 HDCVGASRIFKR-MELEDWRP-NSVTWTSLLSSHKRC---GLYDETLELFKLMRTRGCEI 279
D A RI K+ +ELE N V +L ++ KR G+ + + + GC +
Sbjct: 455 KDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSL 514
Query: 280 SAEALAVVISVCADVVEVDRSREIH 304
V + D R R IH
Sbjct: 515 IEINYIVSEFISGDTTHPHR-RSIH 538
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 276 bits (706), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 158/505 (31%), Positives = 274/505 (54%), Gaps = 51/505 (10%)
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHD 226
+H ++ GF+ L++ KL+ ++ K G + A Q+FD +P T+ ++N M+SGY H
Sbjct: 56 IHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGY-LKH- 113
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
GL E L L + M G + L++
Sbjct: 114 ---------------------------------GLVKELLLLVQRMSYSGEKADGYTLSM 140
Query: 287 VISVC---ADVVEVDRS--REIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFD 341
V+ + + RS R +H +IK E + AL+DTY K L A VF
Sbjct: 141 VLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKLESARTVFET 200
Query: 342 IKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKG 401
+K++N+ ++IS Y G E+A + + +++ ++A++ GF+ G
Sbjct: 201 MKDENVVCCTSMISGYMNQGFVEDAEEIF---------NTTKVKDIVVYNAMVEGFSRSG 251
Query: 402 -CGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVG 460
+ S++++ MQ A PN TF++V+ C+ L + +G+++H +++ + +I +G
Sbjct: 252 ETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQQVHAQIMKSGVYTHIKMG 311
Query: 461 NGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMK 520
+ L++MY KCG VFD ++ +++ SW S+I GYG +G + AL F M + ++
Sbjct: 312 SSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEALELFTRMKEFRIE 371
Query: 521 PDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAND 580
P++VTF+ ALSACSH+GLV G +F M R++ ++P +EHYAC+VDL+GRAG L +A +
Sbjct: 372 PNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDLMGRAGDLNKAFE 431
Query: 581 IVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNS-QITGSFMLLSNIYAANG 639
R MP P+ IW ALL+SC H + ++ AS++ LN+ + G+++ LSN+YA+N
Sbjct: 432 FARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNADKRPGAYLALSNVYASND 491
Query: 640 RWEDSARVRISAKKKGLKKTPGQSW 664
+W++ +++R K++ + KT G+SW
Sbjct: 492 KWDNVSKIREVMKRRRISKTIGRSW 516
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 211/471 (44%), Gaps = 63/471 (13%)
Query: 58 QQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSII 117
+ +++H+ I T ++ KL+ L+ + G +S+A++VF+ +P L +N +I
Sbjct: 51 KAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLS---AYNYMI 107
Query: 118 RANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSS-----SLCRIVHCHAL 172
+ HG + + + M G DG+TL ++++A + GS+ SLCR+VH +
Sbjct: 108 SGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARII 167
Query: 173 ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASR 232
+ ++ LV Y K G++E A +F+ M ++ +M+SGY A
Sbjct: 168 KCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEE 227
Query: 233 IFKRMELEDWRPNSVTWTSLLSSHKRCG-LYDETLELFKLMRTRGCEISAEALAVVISVC 291
IF +++D V + +++ R G +++++ M+ G + A VI C
Sbjct: 228 IFNTTKVKDI----VVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGAC 283
Query: 292 ADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWN 351
+ + + +++H ++K G ++ + ++L+D Y K + DA VF ++ KN+ SW
Sbjct: 284 SVLTSHEVGQQVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWT 343
Query: 352 ALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFR 411
++I Y ++G EEA LELF
Sbjct: 344 SMIDGYGKNGNPEEA----------------------------------------LELFT 363
Query: 412 RMQLAKVKPNCVTFSTVLSVCAELAALNLGREL-----HGYAVRNLMDDNILVGNGLINM 466
RM+ +++PN VTF LS C+ ++ G E+ Y+++ M+ + +++
Sbjct: 364 RMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACI----VDL 419
Query: 467 YMKCGDFKKGHLVFDNIEGR-DLISWNSLISGYGMHGLGDNALTTFDEMIK 516
+ GD K + R D W +L+S +HG + A E+ K
Sbjct: 420 MGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFK 470
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 4/156 (2%)
Query: 437 ALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLIS 496
A G+++H ++ ++ + L+ +++KCG VFD + L ++N +IS
Sbjct: 49 APKAGKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMIS 108
Query: 497 GYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIE 556
GY HGL L M +G K D T L A + G ++V I+
Sbjct: 109 GYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIK 168
Query: 557 PTVE----HYACLVDLLGRAGLLQEANDIVRNMPIE 588
VE LVD ++G L+ A + M E
Sbjct: 169 CDVELDDVLITALVDTYVKSGKLESARTVFETMKDE 204
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 276 bits (706), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 190/667 (28%), Positives = 316/667 (47%), Gaps = 89/667 (13%)
Query: 57 LQQARQLHSQTILTAAYRKPFLAA---KLIALYARFGSVSHAQKVFNAVPFERLDHIPLW 113
L++ R++H I T F+ L+ +YA+ GS++ A++VF + + D + W
Sbjct: 329 LKKGREVHGHVITTGLV--DFMVGIGNGLVNMYAKCGSIADARRVFYFMTDK--DSVS-W 383
Query: 114 NSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALE 173
NS+I +G F A+E Y MR+ P FTL + +C+ L + L + +H +L+
Sbjct: 384 NSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK 443
Query: 174 LGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRI 233
LG ++ V N L+ +Y + G + + ++F MP HD
Sbjct: 444 LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP----------------EHD------- 480
Query: 234 FKRMELEDWRPNSVTWTSLLSSHKRCGL-YDETLELFKLMRTRGCEISAEALAVVISVCA 292
V+W S++ + R E + F + G +++ + V+S +
Sbjct: 481 ------------QVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVS 528
Query: 293 DVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNA 352
+ + ++IHG +K D +NALI Y K + +F
Sbjct: 529 SLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIF------------- 575
Query: 353 LISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRR 412
S AE R + ++W+++ISG+ ++L+L
Sbjct: 576 --SRMAE------------------------RRDNVTWNSMISGYIHNELLAKALDLVWF 609
Query: 413 MQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGD 472
M + + ++TVLS A +A L G E+H +VR ++ +++VG+ L++MY KCG
Sbjct: 610 MLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGR 669
Query: 473 FKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEM-IKAGMKPDHVTFVTALS 531
F+ + R+ SWNS+ISGY HG G+ AL F+ M + PDHVTFV LS
Sbjct: 670 LDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLS 729
Query: 532 ACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNE 591
ACSHAGL+ G F M + + P +EH++C+ D+LGRAG L + D + MP++PN
Sbjct: 730 ACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNV 789
Query: 592 YIWGALLNSC--RTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRI 649
IW +L +C + ++ ++ A + L + +++LL N+YAA GRWED + R
Sbjct: 790 LIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARK 849
Query: 650 SAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENYELNSCF 709
K +KK G SW+ ++ V+ F AG+ H D +Y L+EL +M + Y + F
Sbjct: 850 KMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGF 909
Query: 710 NQECIYD 716
+YD
Sbjct: 910 ---ALYD 913
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 141/539 (26%), Positives = 232/539 (43%), Gaps = 95/539 (17%)
Query: 77 FLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGM 136
F+ + L++ +A+ GS+S+A+KVFN + E + + L N ++ V + E A ++++ M
Sbjct: 244 FVGSGLVSAFAKSGSLSYARKVFNQM--ETRNAVTL-NGLMVGLVRQKWGEEATKLFMDM 300
Query: 137 RKF-GFFPDGFTLPLIIEACSHLGSSSLC--------RIVHCHALELGFRNHL-HVVNKL 186
P+ + + L S SL R VH H + G + + + N L
Sbjct: 301 NSMIDVSPESYVILL-----SSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGL 355
Query: 187 VGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNS 246
V MY K G + DA R+F M +D S
Sbjct: 356 VNMYAKCGSIADA-------------------------------RRVFYFMTDKD----S 380
Query: 247 VTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGY 306
V+W S+++ + G + E +E +K MR + L +S CA + ++IHG
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE 440
Query: 307 VIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEA 366
+K G + + V NAL+ Y + +L + +F + + SWN++I + A S
Sbjct: 441 SLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARS------ 494
Query: 367 HAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFS 426
E+SL E++ F Q A K N +TFS
Sbjct: 495 -------ERSL--------------------------PEAVVCFLNAQRAGQKLNRITFS 521
Query: 427 TVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNI-EG 485
+VLS + L+ LG+++HG A++N + D N LI Y KCG+ +F + E
Sbjct: 522 SVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAER 581
Query: 486 RDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNL 545
RD ++WNS+ISGY + L AL M++ G + D + T LSA + + G +
Sbjct: 582 RDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEV 641
Query: 546 FYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTH 604
VR +E V + LVD+ + G L A MP+ N Y W ++++ H
Sbjct: 642 HACSVRAC-LESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR-NSYSWNSMISGYARH 698
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 134/566 (23%), Positives = 231/566 (40%), Gaps = 95/566 (16%)
Query: 48 ITLLQQCSTLQ-QARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
++ +Q C + AR HS+ + +L LI Y G A+KVF+ +P
Sbjct: 7 LSFVQSCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMP--- 63
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLC-- 164
L + W I+ +G + A+ M K G F + + ++ AC +GS +
Sbjct: 64 LRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFG 123
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVS-GYAF 223
R +H +L + V N L+ MY W + S GYA
Sbjct: 124 RQIHGLMFKLSYAVDAVVSNVLISMY-----------------------WKCIGSVGYAL 160
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
C F +E++ NSV+W S++S + + G +F M+ G +
Sbjct: 161 ---CA-----FGDIEVK----NSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYT 208
Query: 284 LAVVISVCADVVEVDRS--REIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFD 341
+++ + E D +I + K G LFV + L+
Sbjct: 209 FGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLV------------------ 250
Query: 342 IKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKG 401
S++A+SG A V Q+E N ++ + ++ G +
Sbjct: 251 -------------SAFAKSGSLSYARKVFNQMETR---------NAVTLNGLMVGLVRQK 288
Query: 402 CGEESLELFRRMQ-LAKVKPNCVTFSTVLSV-----CAELAALNLGRELHGYAVRN-LMD 454
GEE+ +LF M + V P ++ +LS AE L GRE+HG+ + L+D
Sbjct: 289 WGEEATKLFMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVD 346
Query: 455 DNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEM 514
+ +GNGL+NMY KCG VF + +D +SWNS+I+G +G A+ + M
Sbjct: 347 FMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSM 406
Query: 515 IKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGL 574
+ + P T +++LS+C+ G+ + + ++ I+ V L+ L G
Sbjct: 407 RRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLK-LGIDLNVSVSNALMTLYAETGY 465
Query: 575 LQEANDIVRNMPIEPNEYIWGALLNS 600
L E I +MP E ++ W +++ +
Sbjct: 466 LNECRKIFSSMP-EHDQVSWNSIIGA 490
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/419 (25%), Positives = 182/419 (43%), Gaps = 51/419 (12%)
Query: 47 FITLLQQCSTLQQAR---QLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
I+ L C++L+ A+ Q+H +++ ++ L+ LYA G ++ +K+F+++P
Sbjct: 418 LISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Query: 104 FERLDHIPLWNSIIRANV-SHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSS 162
D + WNSII A S A+ ++ ++ G + T ++ A S L
Sbjct: 478 --EHDQVS-WNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGE 534
Query: 163 LCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTI-LSWNTMVSGY 221
L + +H AL+ + N L+ YGK G M+ ++F M R ++WN+M+SGY
Sbjct: 535 LGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGY 594
Query: 222 AFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISA 281
N L + L+L M G + +
Sbjct: 595 IHNE-----------------------------------LLAKALDLVWFMLQTGQRLDS 619
Query: 282 EALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFD 341
A V+S A V ++R E+H ++ E + V +AL+D Y K L A F
Sbjct: 620 FMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNT 679
Query: 342 IKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKG 401
+ +N SWN++IS YA G EEA + ++ LDG P P+ +++ V+S + G
Sbjct: 680 MPVRNSYSWNSMISGYARHGQGEEALKLFETMK--LDGQTP--PDHVTFVGVLSACSHAG 735
Query: 402 CGEESLELFRRMQLA-KVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILV 459
EE + F M + + P FS + V L+ +L + + M N+L+
Sbjct: 736 LLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELD---KLEDFIEKMPMKPNVLI 791
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/442 (22%), Positives = 179/442 (40%), Gaps = 66/442 (14%)
Query: 215 NTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRT 274
N +++ Y D V A ++F M L N V+W ++S + R G + E L + M
Sbjct: 40 NNLINAYLETGDSVSARKVFDEMPLR----NCVSWACIVSGYSRNGEHKEALVFLRDMVK 95
Query: 275 RGCEISAEALAVVISVCADV--VEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKH-KH 331
G + A V+ C ++ V + R+IHG + K Y V N LI Y K
Sbjct: 96 EGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGS 155
Query: 332 LGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWS 391
+G A F DI+ KN +SW+
Sbjct: 156 VGYALCAFGDIEVKN----------------------------------------SVSWN 175
Query: 392 AVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAA--LNLGRELHGYAV 449
++IS ++ G + +F MQ +P TF ++++ L + L ++
Sbjct: 176 SIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQ 235
Query: 450 RNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALT 509
++ + ++ VG+GL++ + K G VF+ +E R+ ++ N L+ G G+ A
Sbjct: 236 KSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATK 295
Query: 510 TFDEMIKAGMKPDHVTFVTALSACSHAGL-----VAAGRNLFYQMVREFRIEPTVEHYAC 564
F +M + + ++V LS+ L + GR + ++ ++ V
Sbjct: 296 LFMDM-NSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNG 354
Query: 565 LVDLLGRAGLLQEANDIVRNM----PIEPNEYIWGALLNSCRTHKDTKIVEETASQILTL 620
LV++ + G + +A + M + N I G N C + VE S +
Sbjct: 355 LVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCF----IEAVERYKS--MRR 408
Query: 621 NSQITGSFMLLSNIYA-ANGRW 641
+ + GSF L+S++ + A+ +W
Sbjct: 409 HDILPGSFTLISSLSSCASLKW 430
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 49/257 (19%)
Query: 421 NCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVF 480
NCV S V S A R H +N +D ++ + N LIN Y++ GD VF
Sbjct: 3 NCVPLSFVQSCVGHRGA---ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVF 59
Query: 481 DNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVA 540
D + R+ +SW ++SGY +G AL +M+K G+ + FV+ L AC G V
Sbjct: 60 DEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVG 119
Query: 541 A--GRNLFYQMVR-EFRIEPTVE------HYAC------------------------LVD 567
GR + M + + ++ V ++ C ++
Sbjct: 120 ILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIIS 179
Query: 568 LLGRAGLLQEANDIVRNMPIE---PNEYIWGALLNS-CR-THKDTKIVEETASQILTLNS 622
+ +AG + A I +M + P EY +G+L+ + C T D +++E+ I
Sbjct: 180 VYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTI----- 234
Query: 623 QITGSFMLLSNIYAANG 639
Q +G LL++++ +G
Sbjct: 235 QKSG---LLTDLFVGSG 248
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 275 bits (703), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 158/445 (35%), Positives = 238/445 (53%), Gaps = 41/445 (9%)
Query: 265 TLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALID 324
+LE K M L CA + D R +H +K GY+ +FV ++L+D
Sbjct: 100 SLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVD 159
Query: 325 TYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLR 384
Y K + A +F ++ +N
Sbjct: 160 MYAKCGEIVYARKMFDEMPQRN-------------------------------------- 181
Query: 385 PNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGREL 444
V++WS ++ G+A G EE+L LF+ + N +FS+V+SVCA L LGR++
Sbjct: 182 --VVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQI 239
Query: 445 HGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLG 504
HG ++++ D + VG+ L+++Y KCG + + VF+ + ++L WN+++ Y H
Sbjct: 240 HGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHT 299
Query: 505 DNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYAC 564
+ F M +GMKP+ +TF+ L+ACSHAGLV GR F QM +E RIEPT +HYA
Sbjct: 300 QKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYAS 358
Query: 565 LVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQI 624
LVD+LGRAG LQEA +++ NMPI+P E +WGALL SC HK+T++ A ++ L
Sbjct: 359 LVDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVS 418
Query: 625 TGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGL 684
+G + LSN YAA+GR+ED+A+ R + +G KK G SW+E R KV+TF+AG H
Sbjct: 419 SGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKS 478
Query: 685 DEVYVILEELALQMANENYELNSCF 709
E+Y L EL +M Y ++ +
Sbjct: 479 KEIYEKLAELGEEMEKAGYIADTSY 503
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 116/506 (22%), Positives = 206/506 (40%), Gaps = 84/506 (16%)
Query: 45 DFFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPF 104
D ++ + ST++ QLH + + P +A LI Y++ +++ F P
Sbjct: 20 DLLLSSARTRSTIK-GLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQ 78
Query: 105 ERLDHIPLWNSIIRAN-VSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
+ S N + EF ++ G PD LP ++C+ L +
Sbjct: 79 KSSTTWSSIISCFAQNELPWMSLEFLKKMMAG----NLRPDDHVLPSATKSCAILSRCDI 134
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
R VHC +++ G+ + V + LV MY K G + A ++FD MP R +++W+ M+ GYA
Sbjct: 135 GRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYA- 193
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
+ G +E L LFK ++ +
Sbjct: 194 ----------------------------------QMGENEEALWLFKEALFENLAVNDYS 219
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
+ VISVCA+ ++ R+IHG IK ++ FV ++L+ Y K A+ VF ++
Sbjct: 220 FSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVP 279
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
KNL WNA++ +YA + +H
Sbjct: 280 VKNLGIWNAMLKAYA-----QHSHT----------------------------------- 299
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
++ +ELF+RM+L+ +KPN +TF VL+ C+ ++ GR + ++ L
Sbjct: 300 QKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQMKESRIEPTDKHYASL 359
Query: 464 INMYMKCGDFKKGHLVFDNIEGRDLIS-WNSLISGYGMHGLGDNALTTFDEMIKAGMKPD 522
++M + G ++ V N+ S W +L++ +H + A D++ + G
Sbjct: 360 VDMLGRAGRLQEALEVITNMPIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSS 419
Query: 523 --HVTFVTALSACSHAGLVAAGRNLF 546
H++ A +A A R L
Sbjct: 420 GMHISLSNAYAADGRFEDAAKARKLL 445
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 144/311 (46%), Gaps = 42/311 (13%)
Query: 302 EIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESG 361
++HGYV+K G V N LI+ Y K + D+ F D K+ +W+++IS +A+
Sbjct: 36 QLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQ-- 93
Query: 362 LCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPN 421
N + W SLE ++M ++P+
Sbjct: 94 ------------------------NELPWM--------------SLEFLKKMMAGNLRPD 115
Query: 422 CVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFD 481
+ CA L+ ++GR +H +++ D ++ VG+ L++MY KCG+ +FD
Sbjct: 116 DHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFD 175
Query: 482 NIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAA 541
+ R++++W+ ++ GY G + AL F E + + + +F + +S C+++ L+
Sbjct: 176 EMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLEL 235
Query: 542 GRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSC 601
GR + + + + + + + LV L + G+ + A + +P++ N IW A+L +
Sbjct: 236 GRQI-HGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVK-NLGIWNAMLKAY 293
Query: 602 RTHKDTKIVEE 612
H T+ V E
Sbjct: 294 AQHSHTQKVIE 304
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 148/477 (31%), Positives = 245/477 (51%), Gaps = 47/477 (9%)
Query: 230 ASRIFKRMELEDWRP-NSVTWTSLLSSHKRCGLYDETLELFKLMRTRG-CEISAEALAVV 287
A ++F ++E +P N W +L+ + G L++ MR G E +
Sbjct: 72 AHKVFSKIE----KPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFL 127
Query: 288 ISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNL 347
I + +V IH VI+ G+ ++V+N+L+ Y + A+ VF + K+L
Sbjct: 128 IKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDL 187
Query: 348 ESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESL 407
++W++VI+GFA G EE+L
Sbjct: 188 ----------------------------------------VAWNSVINGFAENGKPEEAL 207
Query: 408 ELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMY 467
L+ M +KP+ T ++LS CA++ AL LG+ +H Y ++ + N+ N L+++Y
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267
Query: 468 MKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKA-GMKPDHVTF 526
+CG ++ +FD + ++ +SW SLI G ++G G A+ F M G+ P +TF
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327
Query: 527 VTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMP 586
V L ACSH G+V G F +M E++IEP +EH+ C+VDLL RAG +++A + +++MP
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387
Query: 587 IEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSAR 646
++PN IW LL +C H D+ + E QIL L +G ++LLSN+YA+ RW D +
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447
Query: 647 VRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
+R + G+KK PG S +EV +V+ F G+ H D +Y L+E+ ++ +E Y
Sbjct: 448 IRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGY 504
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 109/434 (25%), Positives = 198/434 (45%), Gaps = 54/434 (12%)
Query: 48 ITLLQQ--CSTLQQARQLHSQTI-----LTAAYRKPFLAAKLIALYARFGSVSHAQKVFN 100
I LLQ S++ + RQ+H+ +I ++ A L L++L + +S+A KVF+
Sbjct: 19 INLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSP-PPMSYAHKVFS 77
Query: 101 AVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFF-PDGFTLPLIIEACSHLG 159
+ E+ ++ +WN++IR G A +Y MR G PD T P +I+A + +
Sbjct: 78 KI--EKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMA 135
Query: 160 SSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVS 219
L +H + GF + ++V N L+ +Y G + A ++FD MP + +++WN++++
Sbjct: 136 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 195
Query: 220 GYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEI 279
G+A N A ++ M + +P+ T SLLS+
Sbjct: 196 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSA------------------------ 231
Query: 280 SAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVF 339
CA + + + +H Y+IK G L N L+D Y + + +A +F
Sbjct: 232 -----------CAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLF 280
Query: 340 FDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFAS 399
++ +KN SW +LI A +G +EA ++L K ++ + L P I++ ++ +
Sbjct: 281 DEMVDKNSVSWTSLIVGLAVNGFGKEA----IELFKYMESTEGLLPCEITFVGILYACSH 336
Query: 400 KGCGEESLELFRRMQLA-KVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNIL 458
G +E E FRRM+ K++P F ++ + A + E Y M N++
Sbjct: 337 CGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYE---YIKSMPMQPNVV 393
Query: 459 VGNGLINMYMKCGD 472
+ L+ GD
Sbjct: 394 IWRTLLGACTVHGD 407
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 131/259 (50%), Gaps = 5/259 (1%)
Query: 46 FFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
F I + + ++ +HS I + ++ L+ LYA G V+ A KVF+ +P +
Sbjct: 126 FLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK 185
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCR 165
L WNS+I +G E A+ +Y M G PDGFT+ ++ AC+ +G+ +L +
Sbjct: 186 DL---VAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGK 242
Query: 166 IVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNH 225
VH + +++G +LH N L+ +Y + GR+E+A LFD M + +SW +++ G A N
Sbjct: 243 RVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG 302
Query: 226 DCVGASRIFKRME-LEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTR-GCEISAEA 283
A +FK ME E P +T+ +L + CG+ E E F+ MR E E
Sbjct: 303 FGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEH 362
Query: 284 LAVVISVCADVVEVDRSRE 302
++ + A +V ++ E
Sbjct: 363 FGCMVDLLARAGQVKKAYE 381
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 273 bits (699), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 179/617 (29%), Positives = 289/617 (46%), Gaps = 84/617 (13%)
Query: 51 LQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERL 107
Q CS L++ R LH + F+ + + + Y++ G+ S A F + E +
Sbjct: 237 FQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDM 296
Query: 108 DHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIV 167
W SII + G E + +++ M+ G PDG + +I + +
Sbjct: 297 FS---WTSIIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAF 353
Query: 168 HCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR-TILSWNTMVSGYAFNHD 226
H + F V N L+ MY K + A +LF + +WNTM+ GY
Sbjct: 354 HGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYG---- 409
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
+ H +C +ELF+ ++ G EI + +
Sbjct: 410 -------------------------KMKCHVKC------IELFRKIQNLGIEIDSASATS 438
Query: 287 VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKN 346
VIS C+ + V + +H YV+K + + V N+LID Y K L A +F
Sbjct: 439 VISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF------- 491
Query: 347 LESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEES 406
CE NVI+W+A+I+ + E++
Sbjct: 492 ----------------CEA------------------DTNVITWNAMIASYVHCEQSEKA 517
Query: 407 LELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINM 466
+ LF RM KP+ +T T+L C +L G+ +H Y + N+ + LI+M
Sbjct: 518 IALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDM 577
Query: 467 YMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTF 526
Y KCG +K +FD +D + WN +ISGYGMHG ++A+ FD+M ++ +KP TF
Sbjct: 578 YAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVKPTGPTF 637
Query: 527 VTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMP 586
+ LSAC+HAGLV G+ LF +M ++ ++P ++HY+CLVDLL R+G L+EA V +MP
Sbjct: 638 LALLSACTHAGLVEQGKKLFLKM-HQYDVKPNLKHYSCLVDLLSRSGNLEEAESTVMSMP 696
Query: 587 IEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSAR 646
P+ IWG LL+SC TH + ++ A + + + Q G +++L+N+Y+A G+WE++ R
Sbjct: 697 FSPDGVIWGTLLSSCMTHGEFEMGIRMAERAVASDPQNDGYYIMLANMYSAAGKWEEAER 756
Query: 647 VRISAKKKGLKKTPGQS 663
R ++ G+ K G S
Sbjct: 757 AREMMRESGVGKRAGHS 773
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 134/558 (24%), Positives = 244/558 (43%), Gaps = 86/558 (15%)
Query: 48 ITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERL 107
+ L Q +L+ R+ ++ I F+A+KLI+ YA +G + + +VF+ V R
Sbjct: 31 VILCDQSLSLESLRKHNALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVT--RR 88
Query: 108 DHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIV 167
D I LWNSII+A+ S+G + ++ + M G PD FT P+++ AC+ L + V
Sbjct: 89 D-IFLWNSIIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFV 147
Query: 168 HCHALELG-FRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHD 226
H L+ G F + V V Y K G ++DAC +FD MP R +
Sbjct: 148 HGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDV--------------- 192
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEI---SAEA 283
V WT+++S H + G + L M + G ++ +
Sbjct: 193 --------------------VAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVDKPNPRT 232
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
L C+++ + R +HG+ +K G FV++++ Y K + +A+ F ++
Sbjct: 233 LECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELG 292
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
++++ SW+++I+ A G
Sbjct: 293 DEDM----------------------------------------FSWTSIIASLARSGDM 312
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
EES ++F MQ + P+ V S +++ ++ + G+ HG+ +R+ + V N L
Sbjct: 313 EESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSL 372
Query: 464 INMYMKCGDFKKGHLVFDNI-EGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPD 522
++MY K +F I E + +WN+++ GYG + F ++ G++ D
Sbjct: 373 LSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEID 432
Query: 523 HVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIV 582
+ + +S+CSH G V G++L +V+ ++ T+ L+DL G+ G L A +
Sbjct: 433 SASATSVISSCSHIGAVLLGKSLHCYVVKT-SLDLTISVVNSLIDLYGKMGDLTVAWRMF 491
Query: 583 RNMPIEPNEYIWGALLNS 600
+ N W A++ S
Sbjct: 492 --CEADTNVITWNAMIAS 507
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 99/430 (23%), Positives = 187/430 (43%), Gaps = 46/430 (10%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
I L + + Q + H I + L+++Y +F +S A+K+F + E
Sbjct: 337 LINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEE- 395
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRI 166
+ WN++++ IE++ ++ G D + +I +CSH+G+ L +
Sbjct: 396 -GNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKS 454
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHD 226
+HC+ ++ + VVN L+ +YGK+G + A ++F
Sbjct: 455 LHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF----------------------- 491
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
C + N +TW ++++S+ C ++ + LF M + + S+ L
Sbjct: 492 C-------------EADTNVITWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLVT 538
Query: 287 VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKN 346
++ C + ++R + IH Y+ + +E L + ALID Y K HL + +F K+
Sbjct: 539 LLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKD 598
Query: 347 LESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEES 406
WN +IS Y G E A A+ Q+E+S ++P ++ A++S G E+
Sbjct: 599 AVCWNVMISGYGMHGDVESAIALFDQMEES-----DVKPTGPTFLALLSACTHAGLVEQG 653
Query: 407 LELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINM 466
+LF +M VKPN +S ++ + + NL D ++ G L++
Sbjct: 654 KKLFLKMHQYDVKPNLKHYSCLVDLLSRSG--NLEEAESTVMSMPFSPDGVIWGT-LLSS 710
Query: 467 YMKCGDFKKG 476
M G+F+ G
Sbjct: 711 CMTHGEFEMG 720
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 273 bits (697), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 183/707 (25%), Positives = 340/707 (48%), Gaps = 102/707 (14%)
Query: 57 LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSI 116
Q+ H I + +++ +++ Y +FG + +A +F+ +P + D + WN++
Sbjct: 16 FQKLSLTHCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMP--KRDSVS-WNTM 72
Query: 117 IRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGF 176
I S G E A ++ M++ G DG++ +++ + + L VH ++ G+
Sbjct: 73 ISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGY 132
Query: 177 RNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKR 236
+++V + LV MY K R+EDA + F + +SWN +++G+ D A +
Sbjct: 133 ECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGL 192
Query: 237 MELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVE 296
ME++ +VT + A A ++++ D +
Sbjct: 193 MEMK----AAVT------------------------------MDAGTFAPLLTLLDDPMF 218
Query: 297 VDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDI-KNKNLESWNALIS 355
+ +++H V+K G + + + NA+I +Y + DA VF + +K+L SWN++I+
Sbjct: 219 CNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIA 278
Query: 356 SYAESGLCEEAHAVLLQLE---------------------------KSLDG---HQPLRP 385
+++ L E A + +Q++ KSL G + L
Sbjct: 279 GFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQ 338
Query: 386 NVISWSAVISGFAS--KGCGEESLELFRRMQ----------------------------- 414
+ +A+IS + G E++L LF ++
Sbjct: 339 VTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFSY 398
Query: 415 --LAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGD 472
+++K + FS +L C++LA L LG+++H A ++ N V + LI MY KCG
Sbjct: 399 LRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGI 458
Query: 473 FKKGHLVFDNIEGR-DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALS 531
+ F I + ++WN++I GY HGLG +L F +M +K DHVTF L+
Sbjct: 459 IESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILT 518
Query: 532 ACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNE 591
ACSH GL+ G L M ++I+P +EHYA VDLLGRAGL+ +A +++ +MP+ P+
Sbjct: 519 ACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDP 578
Query: 592 YIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISA 651
+ L CR + ++ + A+ +L + + +++ LS++Y+ +WE+ A V+
Sbjct: 579 MVLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMM 638
Query: 652 KKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQM 698
K++G+KK PG SWIE+R +V F+A + + ++Y+++++L +M
Sbjct: 639 KERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIYMMIKDLTQEM 685
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 185/402 (46%), Gaps = 46/402 (11%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
+TLL +Q+H++ + + + +I+ YA GSVS A++VF+ + +
Sbjct: 209 LLTLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKRVFDGLGGSK 268
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRI 166
D I WNS+I H E A E+++ M++ D +T ++ ACS +
Sbjct: 269 -DLIS-WNSMIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKS 326
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKL--GRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
+H ++ G N L+ MY + G MEDA LF+ + + ++SWN++++G+A
Sbjct: 327 LHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFA-- 384
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
+ GL ++ ++ F +R+ ++ A
Sbjct: 385 ---------------------------------QKGLSEDAVKFFSYLRSSEIKVDDYAF 411
Query: 285 AVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN 344
+ ++ C+D+ + ++IH K G+ FV ++LI Y K + A F I +
Sbjct: 412 SALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISS 471
Query: 345 K-NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
K + +WNA+I YA+ GL + + + Q+ +Q ++ + ++++A+++ + G
Sbjct: 472 KHSTVAWNAMILGYAQHGLGQVSLDLFSQM-----CNQNVKLDHVTFTAILTACSHTGLI 526
Query: 404 EESLELFRRMQ-LAKVKPNCVTFSTVLSVCAELAALNLGREL 444
+E LEL M+ + K++P ++ + + +N +EL
Sbjct: 527 QEGLELLNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKEL 568
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 77/175 (44%), Gaps = 24/175 (13%)
Query: 47 FITLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F LL+ CS TLQ +Q+H+ + F+ + LI +Y++ G + A+K F +
Sbjct: 411 FSALLRSCSDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQIS 470
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
+ WN++I HG + +++++ M D T I+ ACSH G
Sbjct: 471 SKH--STVAWNAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTG---- 524
Query: 164 CRIVHCHALELGFRNHLHVVNKL----------VGMYGKLGRMEDACQLFDGMPV 208
+ LEL N + V K+ V + G+ G + A +L + MP+
Sbjct: 525 ---LIQEGLEL--LNLMEPVYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPL 574
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 177/624 (28%), Positives = 292/624 (46%), Gaps = 74/624 (11%)
Query: 48 ITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYA---RFGSVSHAQKVFNAVPF 104
++ L+ C +L + QLH I ++ R ++LI ++S+A+ VF ++
Sbjct: 10 LSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESID- 68
Query: 105 ERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLC 164
+ +WNS+IR + + A+ Y M + G+ PD FT P +++ACS L
Sbjct: 69 --CPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFG 126
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
VH ++ GF +++V L+ MY G + ++F+ +P WN
Sbjct: 127 SCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIP-----QWNV-------- 173
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
V W SL+S + + +E F+ M++ G + + +
Sbjct: 174 ----------------------VAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIM 211
Query: 285 AVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN 344
++ C ++ + HG++ G++ Y K
Sbjct: 212 VDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSKVGF---------------------- 249
Query: 345 KNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGE 404
N+ +LI YA+ G A + DG P R ++SW+++I+G++ G E
Sbjct: 250 -NVILATSLIDMYAKCGDLRTARYLF-------DG-MPER-TLVSWNSIITGYSQNGDAE 299
Query: 405 ESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLI 464
E+L +F M + P+ VTF +V+ LG+ +H Y + + + L+
Sbjct: 300 EALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALV 359
Query: 465 NMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAG-MKPDH 523
NMY K GD + F+++E +D I+W +I G HG G+ AL+ F M + G PD
Sbjct: 360 NMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDG 419
Query: 524 VTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVR 583
+T++ L ACSH GLV G+ F +M +EPTVEHY C+VD+L RAG +EA +V+
Sbjct: 420 ITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVK 479
Query: 584 NMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWED 643
MP++PN IWGALLN C H++ ++ + S + +G ++LLSNIYA GRW D
Sbjct: 480 TMPVKPNVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWAD 539
Query: 644 SARVRISAKKKGLKKTPGQSWIEV 667
+R S K K + K G S +E
Sbjct: 540 VKLIRESMKSKRVDKVLGHSSVET 563
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 104/475 (21%), Positives = 187/475 (39%), Gaps = 104/475 (21%)
Query: 47 FITLLQQCSTL---QQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F +L+ CS L Q +H + T +++ L+ +Y G V++ +VF +P
Sbjct: 110 FPYVLKACSGLRDIQFGSCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIP 169
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
++ W S+I V++ F AIE + M+ G + + ++ AC
Sbjct: 170 QW---NVVAWGSLISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVT 226
Query: 164 CRIVHCHALELGFRNHLH--------VVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWN 215
+ H LGF + + L+ MY K G + A LFDGMP RT++SWN
Sbjct: 227 GKWFHGFLQGLGFDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWN 286
Query: 216 TMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTR 275
++++GY+ N D A +F M P+ VT+ S++
Sbjct: 287 SIITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIR--------------------- 325
Query: 276 GCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDA 335
A +I C+ + + IH YV K G+ + AL++ Y K A
Sbjct: 326 ---------ASMIQGCSQL-----GQSIHAYVSKTGFVKDAAIVCALVNMYAKTGDAESA 371
Query: 336 HNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVIS 395
F D++ K+ +W +I A
Sbjct: 372 KKAFEDLEKKDTIAWTVVIIGLA------------------------------------- 394
Query: 396 GFASKGCGEESLELFRRMQ-LAKVKPNCVTFSTVLSVCAELAALNLG-------RELHGY 447
S G G E+L +F+RMQ P+ +T+ VL C+ + + G R+LHG
Sbjct: 395 ---SHGHGNEALSIFQRMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHG- 450
Query: 448 AVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLIS-WNSLISGYGMH 501
++ + ++++ + G F++ + + + ++ W +L++G +H
Sbjct: 451 -----LEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKPNVNIWGALLNGCDIH 500
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 272 bits (695), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 173/636 (27%), Positives = 307/636 (48%), Gaps = 81/636 (12%)
Query: 48 ITLLQQCSTLQQ-ARQLHSQTILTA-AYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
I LQ S L++ Q+H+ I T ++ LIA R G +S+A+KVF+ +P +
Sbjct: 20 IKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDELP-Q 78
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCR 165
R + ++NS+I + + +Y M PD T + I+AC
Sbjct: 79 R--GVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGE 136
Query: 166 IVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNH 225
V C A++ G++N + V + ++ +Y K G+M++A LF M R +
Sbjct: 137 AVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDV-------------- 182
Query: 226 DCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALA 285
+ WT++++ + G + +E ++ M+ G +
Sbjct: 183 ---------------------ICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVML 221
Query: 286 VVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK 345
++ D+ + R +HGY+ + G + V+ +L+D Y
Sbjct: 222 GLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMY------------------- 262
Query: 346 NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEE 405
A+ G E A V ++ + +SW ++ISGFA G +
Sbjct: 263 ------------AKVGFIEVASRVFSRM---------MFKTAVSWGSLISGFAQNGLANK 301
Query: 406 SLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLIN 465
+ E MQ +P+ VT VL C+++ +L GR +H Y ++ + D + L++
Sbjct: 302 AFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRV-TATALMD 360
Query: 466 MYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVT 525
MY KCG +F+++ +DL+ WN++IS YG+HG G ++ F +M ++ ++PDH T
Sbjct: 361 MYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHAT 420
Query: 526 FVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM 585
F + LSA SH+GLV G++ F M+ +++I+P+ +HY CL+DLL RAG ++EA D++ +
Sbjct: 421 FASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSE 480
Query: 586 PIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSA 645
++ IW ALL+ C H++ + + A++IL LN G L+SN +A +W++ A
Sbjct: 481 KLDNALPIWVALLSGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVA 540
Query: 646 RVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVH 681
+VR + ++K PG S IEV ++ TF ++ H
Sbjct: 541 KVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSH 576
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 272 bits (695), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 157/518 (30%), Positives = 267/518 (51%), Gaps = 39/518 (7%)
Query: 222 AFNHDC------VGASRIFKRMEL------EDWRPNSVTWTSLLSSHKRCGLYDETLELF 269
+ N DC + A FKR++L + PN + +L C +LEL+
Sbjct: 800 SLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEPNVFVYNALFKGFVTCSHPIRSLELY 859
Query: 270 KLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKH 329
M S+ + ++ + S + H + K G+ ++ ++ LID Y
Sbjct: 860 VRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAH--IWKFGFGFHVKIQTTLIDFYSAT 917
Query: 330 KHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEK-------------- 375
+ +A VF ++ ++ +W ++S+Y + A+++ Q+ +
Sbjct: 918 GRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYM 977
Query: 376 ---------SLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFS 426
SL P++ ++ISW+ +I G++ E++ +F +M + P+ VT S
Sbjct: 978 GLGNLEQAESLFNQMPVK-DIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMS 1036
Query: 427 TVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGR 486
TV+S CA L L +G+E+H Y ++N ++ +G+ L++MY KCG ++ LVF N+ +
Sbjct: 1037 TVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK 1096
Query: 487 DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLF 546
+L WNS+I G HG AL F +M +KP+ VTFV+ +AC+HAGLV GR ++
Sbjct: 1097 NLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIY 1156
Query: 547 YQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKD 606
M+ ++ I VEHY +V L +AGL+ EA +++ NM EPN IWGALL+ CR HK+
Sbjct: 1157 RSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRIHKN 1216
Query: 607 TKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKT-PGQSWI 665
I E ++++ L +G + LL ++YA RW D A +R ++ G++K PG S I
Sbjct: 1217 LVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSI 1276
Query: 666 EVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
+ K+ + F+A + H DEV ++L+E+ QM Y
Sbjct: 1277 RIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGY 1314
Score = 126 bits (316), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 179/395 (45%), Gaps = 45/395 (11%)
Query: 50 LLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDH 109
+++QCST + + I T+ + L + I F + A + + +
Sbjct: 779 IIKQCSTPKLLESALAAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQM---QEPN 835
Query: 110 IPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHC 169
+ ++N++ + V+ + ++E+YV M + P +T +++A S +S +
Sbjct: 836 VFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSF--ASRFGESLQA 893
Query: 170 HALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGY-------- 221
H + GF H+ + L+ Y GR+ +A ++FD MP R ++W TMVS Y
Sbjct: 894 HIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDS 953
Query: 222 ------------AFNHDCV-----------GASRIFKRMELEDWRPNSVTWTSLLSSHKR 258
+C+ A +F +M ++D ++WT+++ + +
Sbjct: 954 ANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDI----ISWTTMIKGYSQ 1009
Query: 259 CGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFV 318
Y E + +F M G ++ VIS CA + ++ +E+H Y ++ G+ +++
Sbjct: 1010 NKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYI 1069
Query: 319 KNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLD 378
+AL+D Y K L A VFF++ KNL WN++I A G +EA + ++E
Sbjct: 1070 GSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEM--- 1126
Query: 379 GHQPLRPNVISWSAVISGFASKGCGEESLELFRRM 413
+ ++PN +++ +V + G +E ++R M
Sbjct: 1127 --ESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSM 1159
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 142/282 (50%), Gaps = 10/282 (3%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGF 141
LI Y G++ A+ +FN +P + I W ++I+ + + AI ++ M + G
Sbjct: 972 LINGYMGLGNLEQAESLFNQMP---VKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGI 1028
Query: 142 FPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQ 201
PD T+ +I AC+HLG + + VH + L+ GF +++ + LV MY K G +E A
Sbjct: 1029 IPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALL 1088
Query: 202 LFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGL 261
+F +P + + WN+++ G A + A ++F +ME+E +PN+VT+ S+ ++ GL
Sbjct: 1089 VFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGL 1148
Query: 262 YDETLELFKLMRTRGCEIS-AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKN 320
DE +++ M +S E ++ + + + + E+ G + +E +
Sbjct: 1149 VDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNM---EFEPNAVIWG 1205
Query: 321 ALIDTYRKHKHLGDAH---NVFFDIKNKNLESWNALISSYAE 359
AL+D R HK+L A N ++ N + L+S YAE
Sbjct: 1206 ALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAE 1247
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 106/236 (44%), Gaps = 11/236 (4%)
Query: 49 TLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
T++ C+ L+ +++H T+ ++ + L+ +Y++ GS+ A VF +P +
Sbjct: 1037 TVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKK 1096
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCR 165
L WNSII +HG+ + A++++ M P+ T + AC+H G R
Sbjct: 1097 NLF---CWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGR 1153
Query: 166 IVHCHAL-ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR-TILSWNTMVSGYAF 223
++ + + +++ +V ++ K G + +A +L M + W ++ G
Sbjct: 1154 RIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCRI 1213
Query: 224 NHDCVGASRIF-KRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCE 278
+ + V A F K M LE NS + L+S + + + E+ MR G E
Sbjct: 1214 HKNLVIAEIAFNKLMVLEPM--NSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIE 1267
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 236/420 (56%), Gaps = 10/420 (2%)
Query: 247 VTWTSLLSSHKRCGLYDETLELFKLMRTR-GCEISAEALAVVISVCADVVEVDRSREIHG 305
++ T LSS+ G +++ L LF M + + A ++ + CA +H
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 306 YVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEE 365
+ +K + FV AL+D Y K + A +F +I +N WNA+IS Y G +E
Sbjct: 73 HSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 366 AHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGE-ESLELFRRMQLAKVKPNCVT 424
A ++L +++D + PN S++A+I G G ++E +R+M + KPN +T
Sbjct: 133 A----VELYEAMD----VMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLIT 184
Query: 425 FSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIE 484
++S C+ + A L +E+H YA RNL++ + + +GL+ Y +CG LVFD++E
Sbjct: 185 LLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSME 244
Query: 485 GRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRN 544
RD+++W+SLIS Y +HG ++AL TF EM A + PD + F+ L ACSHAGL
Sbjct: 245 DRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALV 304
Query: 545 LFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTH 604
F +M ++ + + +HY+CLVD+L R G +EA +++ MP +P WGALL +CR +
Sbjct: 305 YFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNY 364
Query: 605 KDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSW 664
+ ++ E A ++L + + +++LL IY + GR E++ R+R+ K+ G+K +PG SW
Sbjct: 365 GEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVSPGSSW 424
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 119/242 (49%), Gaps = 32/242 (13%)
Query: 63 LHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP------------------- 103
+H+ ++ + PF+ L+ +Y + SVSHA+K+F+ +P
Sbjct: 70 VHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGK 129
Query: 104 -------FERLDHIP---LWNSIIRANV--SHGYFEFAIEIYVGMRKFGFFPDGFTLPLI 151
+E +D +P +N+II+ V G + AIE Y M +F F P+ TL +
Sbjct: 130 VKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYR-AIEFYRKMIEFRFKPNLITLLAL 188
Query: 152 IEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTI 211
+ ACS +G+ L + +H +A H + + LV YG+ G + +FD M R +
Sbjct: 189 VSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDV 248
Query: 212 LSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKL 271
++W++++S YA + D A + F+ MEL P+ + + ++L + GL DE L FK
Sbjct: 249 VAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADEALVYFKR 308
Query: 272 MR 273
M+
Sbjct: 309 MQ 310
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 140/297 (47%), Gaps = 14/297 (4%)
Query: 122 SHGYFEFAIEIYVGMRKFGFFP-DGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHL 180
+ G E A+ +++ M P D L +++C+ L VH H+++ F ++
Sbjct: 24 NQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSNFLSNP 83
Query: 181 HVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELE 240
V L+ MYGK + A +LFD +P R + WN M+S Y A +++ M
Sbjct: 84 FVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYEAM--- 140
Query: 241 DWRPNSVTWTSLLSSHKRCGLYD---ETLELFKLMRTRGCEISAEALAVVISVCADVVEV 297
D PN ++ +++ G D +E ++ M + + L ++S C+ +
Sbjct: 141 DVMPNESSFNAIIKG--LVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAF 198
Query: 298 DRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSY 357
+EIH Y + E + +K+ L++ Y + + VF ++++++ +W++LIS+Y
Sbjct: 199 RLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAY 258
Query: 358 AESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQ 414
A G E A ++E + + P+ I++ V+ + G +E+L F+RMQ
Sbjct: 259 ALHGDAESALKTFQEMELA-----KVTPDDIAFLNVLKACSHAGLADEALVYFKRMQ 310
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 11/240 (4%)
Query: 47 FITLLQQCSTLQQAR---QLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
+ L+ CS + R ++HS P L + L+ Y R GS+ + Q VF+++
Sbjct: 185 LLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSM- 243
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
E D + W+S+I A HG E A++ + M PD +++ACSH G +
Sbjct: 244 -EDRD-VVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADE 301
Query: 164 CRIVHCHALE--LGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR-TILSWNTMVSG 220
+V+ ++ G R + LV + ++GR E+A ++ MP + T +W ++ G
Sbjct: 302 A-LVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALL-G 359
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEIS 280
N+ + + I R L N + L + G +E L M+ G ++S
Sbjct: 360 ACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVS 419
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 158/484 (32%), Positives = 253/484 (52%), Gaps = 28/484 (5%)
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELF-KLMRTRGCEISAEALAVVISVCADVVEVDRSRE 302
P++ + +L+ + ++ +F ++MR + + A VI + + +
Sbjct: 68 PDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQ 127
Query: 303 IHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGL 362
+H +K G E +LFV LI Y + A VF ++ NL +WNA+I++
Sbjct: 128 MHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGND 187
Query: 363 CEEAHAVL-----------------------LQLEKSLDGHQPLRPNVISWSAVISGFAS 399
A + L+ K + P R +V SWS +I G A
Sbjct: 188 VAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDV-SWSTMIVGIAH 246
Query: 400 KGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILV 459
G ES FR +Q A + PN V+ + VLS C++ + G+ LHG+ + + V
Sbjct: 247 NGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSV 306
Query: 460 GNGLINMYMKCGDFKKGHLVFDNI-EGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAG 518
N LI+MY +CG+ LVF+ + E R ++SW S+I+G MHG G+ A+ F+EM G
Sbjct: 307 NNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYG 366
Query: 519 MKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEA 578
+ PD ++F++ L ACSHAGL+ G + F +M R + IEP +EHY C+VDL GR+G LQ+A
Sbjct: 367 VTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKA 426
Query: 579 NDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAAN 638
D + MPI P +W LL +C +H + ++ E+ ++ L+ +G +LLSN YA
Sbjct: 427 YDFICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATA 486
Query: 639 GRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLD-EVYVILEELALQ 697
G+W+D A +R S + +KKT S +EV K +Y F+AG G+D E + L+E+ L+
Sbjct: 487 GKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGE-KKKGIDIEAHEKLKEIILR 545
Query: 698 MANE 701
+ +E
Sbjct: 546 LKDE 549
Score = 128 bits (322), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/407 (27%), Positives = 183/407 (44%), Gaps = 57/407 (14%)
Query: 48 ITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER- 106
++LL C L+ Q+H I + KLI + A + +A+P+ R
Sbjct: 9 LSLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLI--------LHCAISISDALPYARR 60
Query: 107 -LDHIP-----LWNSIIRANVSHGYFEFAIEIYVGMRKFGF-FPDGFTLPLIIEACSHLG 159
L P ++N+++R ++ ++V M + GF FPD F+ +I+A +
Sbjct: 61 LLLCFPEPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFR 120
Query: 160 SSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRME---------------------D 198
S +HC AL+ G +HL V L+GMYG G +E
Sbjct: 121 SLRTGFQMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVIT 180
Query: 199 AC----------QLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVT 248
AC ++FD M VR SWN M++GY + A RIF M D V+
Sbjct: 181 ACFRGNDVAGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRD----DVS 236
Query: 249 WTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVI 308
W++++ G ++E+ F+ ++ G + +L V+S C+ + + +HG+V
Sbjct: 237 WSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVE 296
Query: 309 KGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKN-LESWNALISSYAESGLCEEAH 367
K GY + V NALID Y + ++ A VF ++ K + SW ++I+ A G EE
Sbjct: 297 KAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEE-- 354
Query: 368 AVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQ 414
AV L E + G + P+ IS+ +++ + G EE + F M+
Sbjct: 355 AVRLFNEMTAYG---VTPDGISFISLLHACSHAGLIEEGEDYFSEMK 398
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 270 bits (691), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 141/438 (32%), Positives = 243/438 (55%), Gaps = 15/438 (3%)
Query: 230 ASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVIS 289
A+R+F ++ PN + + +++ + G E+L F M++RG A ++
Sbjct: 55 ANRVFSHIQ----NPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLK 110
Query: 290 VCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLES 349
C+ + ++ + +HG +I+ G+ ++ +++ Y +GDA VF ++ +N+
Sbjct: 111 SCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVV 170
Query: 350 WNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLEL 409
WN +I + +SG E + Q+ + +++SW+++IS + G E+LEL
Sbjct: 171 WNLMIRGFCDSGDVERGLHLFKQMSER---------SIVSWNSMISSLSKCGRDREALEL 221
Query: 410 FRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYA-VRNLMDDNILVGNGLINMYM 468
F M P+ T TVL + A L L+ G+ +H A L D I VGN L++ Y
Sbjct: 222 FCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYC 281
Query: 469 KCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAG-MKPDHVTFV 527
K GD + +F ++ R+++SWN+LISG ++G G+ + FD MI+ G + P+ TF+
Sbjct: 282 KSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGKVAPNEATFL 341
Query: 528 TALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPI 587
L+ CS+ G V G LF M+ F++E EHY +VDL+ R+G + EA ++NMP+
Sbjct: 342 GVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEAFKFLKNMPV 401
Query: 588 EPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARV 647
N +WG+LL++CR+H D K+ E A +++ + +G+++LLSN+YA GRW+D +V
Sbjct: 402 NANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEEGRWQDVEKV 461
Query: 648 RISAKKKGLKKTPGQSWI 665
R KK L+K+ GQS I
Sbjct: 462 RTLMKKNRLRKSTGQSTI 479
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 200/463 (43%), Gaps = 51/463 (11%)
Query: 44 EDFFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
E + LL +T + ++H+ + + L A I++ + +A +VF+ +
Sbjct: 4 ERKLLRLLHGHNTRTRLPEIHAHLLRHFLHGSNLLLAHFISICGSLSNSDYANRVFSHI- 62
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
+ ++ ++N++I+ G ++ + M+ G + D +T ++++CS L
Sbjct: 63 --QNPNVLVFNAMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRF 120
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
+ VH + GF + +V +Y GRM DA ++FD M R ++ WN M+ G+
Sbjct: 121 GKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCD 180
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
+ D +FK+M + V+W S++SS +CG E LELF M +G +
Sbjct: 181 SGDVERGLHLFKQMS----ERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEAT 236
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGG-YEDYLFVKNALIDTYRKHKHLGDAHNVFFDI 342
+ V+ + A + +D + IH G ++D++ V NAL+D Y K L A +F +
Sbjct: 237 VVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKM 296
Query: 343 KNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGC 402
+ +N+ SWN LI SG A G
Sbjct: 297 QRRNVVSWNTLI----------------------------------------SGSAVNGK 316
Query: 403 GEESLELFRRM-QLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAV-RNLMDDNILVG 460
GE ++LF M + KV PN TF VL+ C+ + G EL G + R ++
Sbjct: 317 GEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHY 376
Query: 461 NGLINMYMKCGDFKKGHLVFDNIE-GRDLISWNSLISGYGMHG 502
++++ + G + N+ + W SL+S HG
Sbjct: 377 GAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHG 419
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 268 bits (685), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 130/377 (34%), Positives = 222/377 (58%), Gaps = 9/377 (2%)
Query: 302 EIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESG 361
+ H +++ G+++ ++V+N+L+ Y + A +F + +++ SW ++++ Y + G
Sbjct: 138 QTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCG 197
Query: 362 LCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPN 421
+ E A + ++ P R N+ +WS +I+G+A C E++++LF M+ V N
Sbjct: 198 MVENAREMFDEM--------PHR-NLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVAN 248
Query: 422 CVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFD 481
+V+S CA L AL G + Y V++ M N+++G L++M+ +CGD +K VF+
Sbjct: 249 ETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFE 308
Query: 482 NIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAA 541
+ D +SW+S+I G +HG A+ F +MI G P VTF LSACSH GLV
Sbjct: 309 GLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEK 368
Query: 542 GRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSC 601
G ++ M ++ IEP +EHY C+VD+LGRAG L EA + + M ++PN I GALL +C
Sbjct: 369 GLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGAC 428
Query: 602 RTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPG 661
+ +K+T++ E + ++ + + +G ++LLSNIYA G+W+ +R K+K +KK PG
Sbjct: 429 KIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPG 488
Query: 662 QSWIEVRKKVYTFSAGN 678
S IE+ K+ F+ G+
Sbjct: 489 WSLIEIDGKINKFTMGD 505
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 174/374 (46%), Gaps = 19/374 (5%)
Query: 48 ITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGS-------VSHAQKVFN 100
+ LLQ CS+ + +H + T F+A++L+AL + + +A +F+
Sbjct: 16 LALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFS 75
Query: 101 AVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGS 160
+ + ++ ++N +IR + A Y M K +PD T P +I+A S +
Sbjct: 76 QI---QNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 161 SSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSG 220
+ H + GF+N ++V N LV MY G + A ++F M R ++SW +MV+G
Sbjct: 133 VLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAG 192
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEIS 280
Y A +F M N TW+ +++ + + +++ ++LF+ M+ G +
Sbjct: 193 YCKCGMVENAREMFDEMP----HRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVAN 248
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFF 340
+ VIS CA + ++ + YV+K L + AL+D + + + A +VF
Sbjct: 249 ETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFE 308
Query: 341 DIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASK 400
+ + SW+++I A G +A Q+ SL P ++++AV+S +
Sbjct: 309 GLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQM-ISLG----FIPRDVTFTAVLSACSHG 363
Query: 401 GCGEESLELFRRMQ 414
G E+ LE++ M+
Sbjct: 364 GLVEKGLEIYENMK 377
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/271 (21%), Positives = 119/271 (43%), Gaps = 33/271 (12%)
Query: 381 QPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNL 440
Q PN+ ++ +I F++ ++ + +M +++ P+ +TF ++ +E+ + +
Sbjct: 76 QIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLV 135
Query: 441 GRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGM 500
G + H VR +++ V N L++MY CG +F + RD++SW S+++GY
Sbjct: 136 GEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCK 195
Query: 501 HGLGDNALTTFDEMI-------------------------------KAGMKPDHVTFVTA 529
G+ +NA FDEM + G+ + V+
Sbjct: 196 CGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSV 255
Query: 530 LSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEP 589
+S+C+H G + G + +V+ + A LVD+ R G +++A + +P E
Sbjct: 256 ISSCAHLGALEFGERAYEYVVKSHMTVNLILGTA-LVDMFWRCGDIEKAIHVFEGLP-ET 313
Query: 590 NEYIWGALLNSCRTHKDTKIVEETASQILTL 620
+ W +++ H SQ+++L
Sbjct: 314 DSLSWSSIIKGLAVHGHAHKAMHYFSQMISL 344
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 121/259 (46%), Gaps = 30/259 (11%)
Query: 44 EDFFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
E+ + + C + A ++ Q +R ++A Y + G V +A+++F+ +P
Sbjct: 155 ENSLVHMYANCGFIAAAGRIFGQM----GFRDVVSWTSMVAGYCKCGMVENAREMFDEMP 210
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
L W+ +I + FE AI+++ M++ G + + +I +C+HLG
Sbjct: 211 HRNLF---TWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLG---- 263
Query: 164 CRIVHCHALELGFRNHLHVVNK-----------LVGMYGKLGRMEDACQLFDGMPVRTIL 212
ALE G R + +VV LV M+ + G +E A +F+G+P L
Sbjct: 264 -------ALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSL 316
Query: 213 SWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLM 272
SW++++ G A + A F +M + P VT+T++LS+ GL ++ LE+++ M
Sbjct: 317 SWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENM 376
Query: 273 RT-RGCEISAEALAVVISV 290
+ G E E ++ +
Sbjct: 377 KKDHGIEPRLEHYGCIVDM 395
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 267 bits (682), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 172/656 (26%), Positives = 329/656 (50%), Gaps = 32/656 (4%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
+ L + L++AR + + + R + +IA Y +F +V A+++F + ER
Sbjct: 29 LVNLYSKSGLLREARNVFDEML----ERNVYSWNAVIAAYVKFNNVKEARELFESDNCER 84
Query: 107 LDHIPLWNSIIRANV-SHGYFEFAIEIYVGM---RKFGFFPDGFTLPLIIEACSHLGSSS 162
+ +N+++ + G AIE++ M K + D FT+ +++ + L +
Sbjct: 85 --DLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVF 142
Query: 163 LCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTI--LSWNTMVSG 220
+H ++ G V+ L+ MY K G+ ++ C +F+G V + ++ N M++
Sbjct: 143 YGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAA 202
Query: 221 YAFNHDCVGASRIFKRM-ELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEI 279
Y D A +F R EL D +++W +L++ + + G +E L++ M G +
Sbjct: 203 YCREGDIDKALSVFWRNPELND----TISWNTLIAGYAQNGYEEEALKMAVSMEENGLKW 258
Query: 280 SAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVF 339
+ V++V + + + +E+H V+K G FV + ++D Y K ++ A +
Sbjct: 259 DEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAH 318
Query: 340 FDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFAS 399
NL S +++I Y+ G EA + L + N++ W+A+ G+ +
Sbjct: 319 LLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSE---------KNLVVWTAMFLGYLN 369
Query: 400 KGCGEESLELFRRMQLAKVK-PNCVTFSTVLSVCAELAALNLGRELHGYAVRN--LMDDN 456
+ LEL R + P+ + +VL C+ A + G+E+HG+++R LMD
Sbjct: 370 LRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKK 429
Query: 457 ILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIK 516
++ ++MY KCG+ + +FD+ RD + +N++I+G HG + F++M +
Sbjct: 430 LVTA--FVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTE 487
Query: 517 AGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQ 576
G KPD +TF+ LSAC H GLV G F M+ + I P HY C++DL G+A L
Sbjct: 488 GGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLD 547
Query: 577 EANDIVRNM-PIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIY 635
+A +++ + +E + I GA LN+C +K+T++V+E ++L + ++ ++N Y
Sbjct: 548 KAIELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAY 607
Query: 636 AANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVIL 691
A++GRW++ R+R + K L+ G SW + K+ + F++ +I H + +Y +L
Sbjct: 608 ASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHYETEAIYAML 663
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/459 (23%), Positives = 210/459 (45%), Gaps = 51/459 (11%)
Query: 184 NKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWR 243
N+LV +Y K G + +A +FD M R + SWN +++ Y ++ A +F E ++
Sbjct: 27 NQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEARELF---ESDNCE 83
Query: 244 PNSVTWTSLLSSHKRC-GLYDETLELFKLMRTRGCE---ISAEALAVVISVCADVVEVDR 299
+ +T+ +LLS + G E +E+F M + + I + ++ + A + V
Sbjct: 84 RDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTTMVKLSAKLTNVFY 143
Query: 300 SREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFD--IKNKNLESWNALISSY 357
++HG ++K G + F ++LI Y K + N+F ++ + + NA+I++Y
Sbjct: 144 GEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAY 203
Query: 358 AESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAK 417
G ++A +V + P + ISW+ +I+G+A G EE+L++ M+
Sbjct: 204 CREGDIDKALSVFWR--------NPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENG 255
Query: 418 VKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFK--- 474
+K + +F VL+V + L +L +G+E+H ++N N V +G++++Y KCG+ K
Sbjct: 256 LKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAE 315
Query: 475 -----------------------KGHLV-----FDNIEGRDLISWNSLISGYGMHGLGDN 506
+G +V FD++ ++L+ W ++ GY D+
Sbjct: 316 SAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDS 375
Query: 507 ALTTFDEMIKAGMK-PDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACL 565
L I PD + V+ L ACS + G+ + +R I +
Sbjct: 376 VLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRT-GILMDKKLVTAF 434
Query: 566 VDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTH 604
VD+ + G ++ A I + E + ++ A++ C H
Sbjct: 435 VDMYSKCGNVEYAERIF-DSSFERDTVMYNAMIAGCAHH 472
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 130/282 (46%), Gaps = 46/282 (16%)
Query: 308 IKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAH 367
IK G N L++ Y K L +A NVF ++ +N+ SWNA+I++Y + +EA
Sbjct: 15 IKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNVKEA- 73
Query: 368 AVLLQLEKSLDGHQPLRPNVISWSAVISGFA-SKGCGEESLELF---RRMQLAKVKPNCV 423
+ L ++I+++ ++SGFA + GC E++E+F R + + +
Sbjct: 74 -------RELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDF 126
Query: 424 TFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFD-- 481
T +T++ + A+L + G +LHG V+ D + LI+MY KCG FK+ +F+
Sbjct: 127 TVTTMVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGS 186
Query: 482 --------------------------------NIEGRDLISWNSLISGYGMHGLGDNALT 509
N E D ISWN+LI+GY +G + AL
Sbjct: 187 CVEFVDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALK 246
Query: 510 TFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVR 551
M + G+K D +F L+ S + G+ + ++++
Sbjct: 247 MAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLK 288
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 266 bits (679), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 148/480 (30%), Positives = 263/480 (54%), Gaps = 15/480 (3%)
Query: 230 ASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV--V 287
A++I R E +P S++ +H + + +++ + ++ + + G ++ + V +
Sbjct: 59 ANQILDRSE----KPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFL 114
Query: 288 ISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNL 347
+ C + + ++HG I+ G+++ V+ LI Y + L H VF I +
Sbjct: 115 VQACTGLRMRETGLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDF 174
Query: 348 ESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESL 407
A++++ A G ++ K +G P I+W+A+ISG+A G E+L
Sbjct: 175 VCRTAMVTACARCG-------DVVFARKLFEGMPERDP--IAWNAMISGYAQVGESREAL 225
Query: 408 ELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMY 467
+F MQL VK N V +VLS C +L AL+ GR H Y RN + + + L+++Y
Sbjct: 226 NVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLY 285
Query: 468 MKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFV 527
KCGD +K VF +E +++ +W+S ++G M+G G+ L F M + G+ P+ VTFV
Sbjct: 286 AKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFV 345
Query: 528 TALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPI 587
+ L CS G V G+ F M EF IEP +EHY CLVDL RAG L++A I++ MP+
Sbjct: 346 SVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPM 405
Query: 588 EPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARV 647
+P+ +W +LL++ R +K+ ++ + ++L L + G+++LLSNIYA + W++ + V
Sbjct: 406 KPHAAVWSSLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHV 465
Query: 648 RISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENYELNS 707
R S K KG++K PG S +EV +V+ F G+ H ++ + ++++ ++ Y+ ++
Sbjct: 466 RQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADT 525
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/461 (22%), Positives = 200/461 (43%), Gaps = 55/461 (11%)
Query: 48 ITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERL 107
I LL T ++ RQ+H++ + + L + A H + +R
Sbjct: 10 IALLDSGITFKEVRQIHAKLYVDGTLKDDHLVGHFVKAVAL---SDHKYLDYANQILDRS 66
Query: 108 DHIPLW--NSIIRANVSHGYFEFAIEIYVGMRKFG--FFPDGFTLPLIIEACSHLGSSSL 163
+ L+ NS+IRA+ E + + Y + G PD +T+ +++AC+ L
Sbjct: 67 EKPTLFALNSMIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRET 126
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
VH + GF N HV L+ +Y +LG ++ ++F+ +P + MV+ A
Sbjct: 127 GLQVHGMTIRRGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACAR 186
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
D V A ++F+ M D + W +++S + + G E L +F LM+ G +++ A
Sbjct: 187 CGDVVFARKLFEGMPERD----PIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVA 242
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
+ V+S C + +D+ R H Y+ + + + + L+D Y K + A VF+ ++
Sbjct: 243 MISVLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGME 302
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
KN+ +W S+ ++G A G G
Sbjct: 303 EKNVYTW----------------------------------------SSALNGLAMNGFG 322
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNL--MDDNILVGN 461
E+ LELF M+ V PN VTF +VL C+ + ++ G+ H ++RN ++ +
Sbjct: 323 EKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR-HFDSMRNEFGIEPQLEHYG 381
Query: 462 GLINMYMKCGDFKKGHLVFDNIEGRDLIS-WNSLISGYGMH 501
L+++Y + G + + + + + W+SL+ M+
Sbjct: 382 CLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMY 422
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 264 bits (675), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/452 (32%), Positives = 251/452 (55%), Gaps = 11/452 (2%)
Query: 245 NSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV--VISVCADVVEVDRSRE 302
N W +++ R + + +F M + + L V + + R+
Sbjct: 88 NPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQ 147
Query: 303 IHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGL 362
+HG VIK G ED F++N ++ Y L +A +F + ++ +WN++I +A+ GL
Sbjct: 148 LHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGL 207
Query: 363 CEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNC 422
++A + ++ P R N +SW+++ISGF G +++L++FR MQ VKP+
Sbjct: 208 IDQAQNLFDEM--------PQR-NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDG 258
Query: 423 VTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDN 482
T ++L+ CA L A GR +H Y VRN + N +V LI+MY KCG ++G VF+
Sbjct: 259 FTMVSLLNACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFEC 318
Query: 483 IEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAG 542
+ L WNS+I G +G + A+ F E+ ++G++PD V+F+ L+AC+H+G V
Sbjct: 319 APKKQLSCWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRA 378
Query: 543 RNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCR 602
F M ++ IEP+++HY +V++LG AGLL+EA +++NMP+E + IW +LL++CR
Sbjct: 379 DEFFRLMKEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACR 438
Query: 603 THKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQ 662
+ ++ + A + L+ T ++LLSN YA+ G +E++ R+ K++ ++K G
Sbjct: 439 KIGNVEMAKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVGC 498
Query: 663 SWIEVRKKVYTFSAGNIVHLGLDEVYVILEEL 694
S IEV +V+ F + H E+Y +L+ L
Sbjct: 499 SSIEVDFEVHEFISCGGTHPKSAEIYSLLDIL 530
Score = 126 bits (317), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 115/496 (23%), Positives = 211/496 (42%), Gaps = 88/496 (17%)
Query: 53 QCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIP- 111
QCST+++ +Q+H+ I T A++++A F S + + + F R++H
Sbjct: 34 QCSTMRELKQIHASLIKTGLISDTVTASRVLA----FCCASPSDMNYAYLVFTRINHKNP 89
Query: 112 -LWNSIIRANVSHGYFEFAIEIYVGM--RKFGFFPDGFTLPLIIEACSHLGSSSLCRIVH 168
+WN+IIR + E AI I++ M P T P + +A LG + R +H
Sbjct: 90 FVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLH 149
Query: 169 CHALELGFRNHLHVVNKLVGMY-------------------------------GKLGRME 197
++ G + + N ++ MY K G ++
Sbjct: 150 GMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLID 209
Query: 198 DACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHK 257
A LFD MP R +SWN+M+SG+ N A +F+ M+ +D +P+ T SLL++
Sbjct: 210 QAQNLFDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNA-- 267
Query: 258 RCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLF 317
CA + ++ R IH Y+++ +E
Sbjct: 268 ---------------------------------CAYLGASEQGRWIHEYIVRNRFELNSI 294
Query: 318 VKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSL 377
V ALID Y K + + NVF K L WN++I A +G E A + +LE+S
Sbjct: 295 VVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFSELERS- 353
Query: 378 DGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLA-KVKPNCVTFSTVLSVCAELA 436
L P+ +S+ V++ A G + E FR M+ ++P+ ++ +++V
Sbjct: 354 ----GLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGAG 409
Query: 437 ALNLGRELHGYAVRNL-MDDNILVGNGLINMYMKCGDF---KKGHLVFDNIEGRDLISWN 492
L L ++N+ ++++ ++ + L++ K G+ K+ ++ + +
Sbjct: 410 LLEEAEAL----IKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPDETCGYV 465
Query: 493 SLISGYGMHGLGDNAL 508
L + Y +GL + A+
Sbjct: 466 LLSNAYASYGLFEEAV 481
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 264 bits (674), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 140/349 (40%), Positives = 208/349 (59%), Gaps = 11/349 (3%)
Query: 351 NALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELF 410
++L+ Y +SG E A+ V ++ P R NV+SW+A+ISGFA + + L+L+
Sbjct: 159 SSLVVLYRDSGEVENAYKVFEEM--------PER-NVVSWTAMISGFAQEWRVDICLKLY 209
Query: 411 RRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKC 470
+M+ + PN TF+ +LS C AL GR +H + + + + N LI+MY KC
Sbjct: 210 SKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKC 269
Query: 471 GDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMI-KAGMKPDHVTFVTA 529
GD K +FD +D++SWNS+I+GY HGL A+ F+ M+ K+G KPD +T++
Sbjct: 270 GDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGV 329
Query: 530 LSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEP 589
LS+C HAGLV GR F+ ++ E ++P + HY+CLVDLLGR GLLQEA +++ NMP++P
Sbjct: 330 LSSCRHAGLVKEGRK-FFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKP 388
Query: 590 NEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRI 649
N IWG+LL SCR H D A + L L + + L+N+YA+ G W+++A VR
Sbjct: 389 NSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLANLYASVGYWKEAATVRK 448
Query: 650 SAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQM 698
K KGLK PG SWIE+ V+ F A + + + E+ +L L M
Sbjct: 449 LMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIVHVLHCLIDHM 497
Score = 119 bits (297), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 111/201 (55%), Gaps = 4/201 (1%)
Query: 77 FLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGM 136
+L + L+ LY G V +A KVF +P ER ++ W ++I + +++Y M
Sbjct: 156 YLGSSLVVLYRDSGEVENAYKVFEEMP-ER--NVVSWTAMISGFAQEWRVDICLKLYSKM 212
Query: 137 RKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRM 196
RK P+ +T ++ AC+ G+ R VHC L +G +++LH+ N L+ MY K G +
Sbjct: 213 RKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDL 272
Query: 197 EDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFK-RMELEDWRPNSVTWTSLLSS 255
+DA ++FD + ++SWN+M++GYA + + A +F+ M +P+++T+ +LSS
Sbjct: 273 KDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSS 332
Query: 256 HKRCGLYDETLELFKLMRTRG 276
+ GL E + F LM G
Sbjct: 333 CRHAGLVKEGRKFFNLMAEHG 353
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 137/309 (44%), Gaps = 39/309 (12%)
Query: 136 MRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGR 195
+++ G+ D + L + +C HC AL+ GF + +++ + LV +Y G
Sbjct: 111 VKRDGWSFDAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGE 170
Query: 196 MEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSS 255
+E+A ++F+ MP R ++SW M+SG+A ++WR
Sbjct: 171 VENAYKVFEEMPERNVVSWTAMISGFA-----------------QEWR------------ 201
Query: 256 HKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDY 315
D L+L+ MR + + ++S C + + R +H + G + Y
Sbjct: 202 ------VDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSY 255
Query: 316 LFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEK 375
L + N+LI Y K L DA +F NK++ SWN++I+ YA+ GL +A ++L +
Sbjct: 256 LHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQA----IELFE 311
Query: 376 SLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAEL 435
+ +P+ I++ V+S G +E + F M +KP +S ++ +
Sbjct: 312 LMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAEHGLKPELNHYSCLVDLLGRF 371
Query: 436 AALNLGREL 444
L EL
Sbjct: 372 GLLQEALEL 380
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 110/237 (46%), Gaps = 13/237 (5%)
Query: 47 FITLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F LL C+ L Q R +H QT+ ++ LI++Y + G + A ++F+
Sbjct: 224 FTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFD--Q 281
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIY-VGMRKFGFFPDGFTLPLIIEACSHLGSSS 162
F D + WNS+I HG AIE++ + M K G PD T ++ +C H G
Sbjct: 282 FSNKDVVS-WNSMIAGYAQHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCRHAGLVK 340
Query: 163 LCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR-TILSWNTMVSGY 221
R E G + L+ + LV + G+ G +++A +L + MP++ + W +++
Sbjct: 341 EGRKFFNLMAEHGLKPELNHYSCLVDLLGRFGLLQEALELIENMPMKPNSVIWGSLLFSC 400
Query: 222 AFNHDC-VGASRIFKRMELEDWRPN-SVTWTSLLSSHKRCGLYDETLELFKLMRTRG 276
+ D G +R+ LE P+ + T L + + G + E + KLM+ +G
Sbjct: 401 RVHGDVWTGIRAAEERLMLE---PDCAATHVQLANLYASVGYWKEAATVRKLMKDKG 454
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 63/126 (50%)
Query: 425 FSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIE 484
S+ + C G H A++ ++ +G+ L+ +Y G+ + + VF+ +
Sbjct: 123 LSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMP 182
Query: 485 GRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRN 544
R+++SW ++ISG+ D L + +M K+ P+ TF LSAC+ +G + GR+
Sbjct: 183 ERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRS 242
Query: 545 LFYQMV 550
+ Q +
Sbjct: 243 VHCQTL 248
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 263 bits (671), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 140/423 (33%), Positives = 228/423 (53%), Gaps = 25/423 (5%)
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREI 303
PN T S++ ++ + L +F+ M + V+ CA + R+I
Sbjct: 103 PNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQI 162
Query: 304 HGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLC 363
HG IK G +FV+N L++ Y + + A V + ++ SWN+L+S+Y E GL
Sbjct: 163 HGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLV 222
Query: 364 EEAHAVLLQLE-----------------------KSLDGHQPLRPNVISWSAVISGFASK 400
+EA A+ ++E K + P+R +V+SW+A+++ +A
Sbjct: 223 DEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVR-DVVSWNAMVTAYAHV 281
Query: 401 GCGEESLELFRRM-QLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILV 459
GC E LE+F +M + KP+ T +VLS CA L +L+ G +H Y ++ ++ +
Sbjct: 282 GCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFL 341
Query: 460 GNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGM 519
L++MY KCG K VF RD+ +WNS+IS +HGLG +AL F EM+ G
Sbjct: 342 ATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGF 401
Query: 520 KPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAN 579
KP+ +TF+ LSAC+H G++ R LF M +R+EPT+EHY C+VDLLGR G ++EA
Sbjct: 402 KPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAE 461
Query: 580 DIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANG 639
++V +P + + +LL +C+ + E A+++L LN + + + +SN+YA++G
Sbjct: 462 ELVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNLRDSSGYAQMSNLYASDG 521
Query: 640 RWE 642
RWE
Sbjct: 522 RWE 524
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/430 (24%), Positives = 196/430 (45%), Gaps = 42/430 (9%)
Query: 48 ITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYA---RFGSVSHAQKVFNAVPF 104
++ ++ +L + +Q H+ + T + F A+KL+A A +VS+A + N +
Sbjct: 43 LSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGS 102
Query: 105 ER-LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
H NS+IRA + E A+ ++ M FPD ++ +++AC+
Sbjct: 103 PNGFTH----NSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEE 158
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
R +H ++ G + V N LV +YG+ G E A ++ D MPVR +SWN+++S Y
Sbjct: 159 GRQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLE 218
Query: 224 NHDCVGASRIFKRME---LEDWR------------------------PNSVTWTSLLSSH 256
A +F ME +E W + V+W ++++++
Sbjct: 219 KGLVDEARALFDEMEERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAY 278
Query: 257 KRCGLYDETLELFKLMRTRGCE-ISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDY 315
G Y+E LE+F M E L V+S CA + + + +H Y+ K G E
Sbjct: 279 AHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIE 338
Query: 316 LFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEK 375
F+ AL+D Y K + A VF +++ +WN++IS + GL ++A + ++
Sbjct: 339 GFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMV- 397
Query: 376 SLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM-QLAKVKPNCVTFSTVLSVCAE 434
++ +PN I++ V+S G +++ +LF M + +V+P + ++ +
Sbjct: 398 ----YEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGR 453
Query: 435 LAALNLGREL 444
+ + EL
Sbjct: 454 MGKIEEAEEL 463
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/250 (22%), Positives = 109/250 (43%), Gaps = 18/250 (7%)
Query: 406 SLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLIN 465
+L L ++ L K+ T +LS +L ++ H + ++ + + + L+
Sbjct: 20 NLRLLQKENLKKMSVCSSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVA 79
Query: 466 MYMKCGDFKK---GHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPD 522
+ K H + + I + + NS+I Y + ALT F EM+ + PD
Sbjct: 80 FAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPD 139
Query: 523 HVTFVTALSACSHAGLVAAGRN---LFYQ--MVREFRIEPTVEHYACLVDLLGRAGLLQE 577
+F L AC+ GR LF + +V + +E T LV++ GR+G +
Sbjct: 140 KYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVENT------LVNVYGRSGYFEI 193
Query: 578 ANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAA 637
A ++ MP+ + W +LL++ + + +V+E + + + S+ + + YAA
Sbjct: 194 ARKVLDRMPVR-DAVSWNSLLSA---YLEKGLVDEARALFDEMEERNVESWNFMISGYAA 249
Query: 638 NGRWEDSARV 647
G +++ V
Sbjct: 250 AGLVKEAKEV 259
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 262 bits (669), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 175/662 (26%), Positives = 306/662 (46%), Gaps = 122/662 (18%)
Query: 49 TLLQQCSTLQ---QARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
++L+ C++L + Q+H TI T + L+A+YA+ +S A+ +F + E
Sbjct: 130 SVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGE 189
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCR 165
+ + W S++ +G+ AIE + +R+ G + +T P ++ AC+ S S CR
Sbjct: 190 KNN--VTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACA---SVSACR 244
Query: 166 I---VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYA 222
+ VHC ++ GF+ +++V + L+ MY K ME A L +GM V +
Sbjct: 245 VGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDV----------- 293
Query: 223 FNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAE 282
V+W S++ R GL E L +F M R +I
Sbjct: 294 ------------------------VSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDF 329
Query: 283 ALAVVISVCA-DVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFD 341
+ +++ A E+ + H ++K GY Y V NAL+D Y
Sbjct: 330 TIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLVNNALVDMY--------------- 374
Query: 342 IKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKG 401
A+ G+ + A V + + +VISW+A+++G G
Sbjct: 375 ----------------AKRGIMDSALKVFEGM---------IEKDVISWTALVTGNTHNG 409
Query: 402 CGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGN 461
+E+L+LF M++ + P+ + ++VLS AEL L G+++HG +++ ++ V N
Sbjct: 410 SYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNN 469
Query: 462 GLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKP 521
L+ MY KCG + +++F+++E RDLI+W LI GY +GL ++A FD
Sbjct: 470 SLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNGLLEDAQRYFD--------- 520
Query: 522 DHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI 581
M + I P EHYAC++DL GR+G + +
Sbjct: 521 --------------------------SMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQL 554
Query: 582 VRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRW 641
+ M +EP+ +W A+L + R H + + E A ++ L ++ LSN+Y+A GR
Sbjct: 555 LHQMEVEPDATVWKAILAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQ 614
Query: 642 EDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANE 701
+++A VR K + + K PG SW+E + KV++F + + H + E+Y ++E+ L +
Sbjct: 615 DEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYSKVDEMMLLIKEA 674
Query: 702 NY 703
Y
Sbjct: 675 GY 676
Score = 159 bits (401), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 206/435 (47%), Gaps = 71/435 (16%)
Query: 177 RNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKR 236
R LH N L+G K GR+++A Q+FD MP R +WNTM+ Y+ + A ++F+
Sbjct: 26 RTKLHS-NLLLGDLSKSGRVDEARQMFDKMPERDEFTWNTMIVAYSNSRRLSDAEKLFRS 84
Query: 237 MELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVE 296
++ N+++W +L+S + + G E LF M++ G + + L V+ +C +V
Sbjct: 85 NPVK----NTISWNALISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVL 140
Query: 297 VDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK-NKNLESWNALIS 355
+ R +IHG+ IK G++ + V N L+ Y + K + +A +F ++ KN +W ++++
Sbjct: 141 LLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLT 200
Query: 356 SYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQL 415
Y++ +GFA K ++E FR ++
Sbjct: 201 GYSQ-----------------------------------NGFAFK-----AIECFRDLRR 220
Query: 416 AKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKK 475
+ N TF +VL+ CA ++A +G ++H V++ NI V + LI+MY KC + +
Sbjct: 221 EGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMES 280
Query: 476 GHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTAL----- 530
+ + +E D++SWNS+I G GL AL+ F M + MK D T + L
Sbjct: 281 ARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFAL 340
Query: 531 -------SACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVR 583
++ +H +V G Y++V LVD+ + G++ A +
Sbjct: 341 SRTEMKIASSAHCLIVKTGYAT-YKLVNN-----------ALVDMYAKRGIMDSALKVFE 388
Query: 584 NMPIEPNEYIWGALL 598
M IE + W AL+
Sbjct: 389 GM-IEKDVISWTALV 402
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 259 bits (662), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 172/614 (28%), Positives = 285/614 (46%), Gaps = 79/614 (12%)
Query: 52 QQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIP 111
++ T ++LHS + R P+ A +L YA + A+K+F+ P ER +
Sbjct: 16 RKIQTRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFP-ER--SVF 72
Query: 112 LWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHA 171
LWNSIIRA F + ++ + + PD FT + S + R +H A
Sbjct: 73 LWNSIIRAYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIA 132
Query: 172 LELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGAS 231
+ G + +V Y K G + +A +LF +P + WN M+ GY
Sbjct: 133 IVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGC-------- 184
Query: 232 RIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVC 291
CG +D+ + LF LM+ RG + + + + S
Sbjct: 185 ---------------------------CGFWDKGINLFNLMQHRGHQPNCYTMVALTSGL 217
Query: 292 ADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWN 351
D + + +H + +K + + +V AL++ Y + + A +VF I
Sbjct: 218 IDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSIS-------- 269
Query: 352 ALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFR 411
P++++ S++I+G++ G +E+L LF
Sbjct: 270 --------------------------------EPDLVACSSLITGYSRCGNHKEALHLFA 297
Query: 412 RMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCG 471
++++ KP+CV + VL CAEL+ G+E+H Y +R ++ +I V + LI+MY KCG
Sbjct: 298 ELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCG 357
Query: 472 DFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALS 531
K +F I ++++S+NSLI G G+HG A F E+++ G+ PD +TF L
Sbjct: 358 LLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLC 417
Query: 532 ACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNE 591
C H+GL+ G+ +F +M EF IEP EHY +V L+G AG L+EA + V ++ +
Sbjct: 418 TCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDS 477
Query: 592 YIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSF-MLLSNIYAANGRWEDSARVRIS 650
I GALL+ C H++T + E A I + + ++LSN+YA GRW++ R+R
Sbjct: 478 GILGALLSCCEVHENTHLAEVVAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDG 537
Query: 651 AKKKGLKKTPGQSW 664
+ K PG SW
Sbjct: 538 ISESYGGKLPGISW 551
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 259 bits (662), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 134/411 (32%), Positives = 220/411 (53%), Gaps = 41/411 (9%)
Query: 294 VVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNAL 353
+ +V IH VI+ G+ ++V+N+L+ Y + A+ VF + K+L
Sbjct: 1 MADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDL------ 54
Query: 354 ISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM 413
++W++VI+GFA G EE+L L+ M
Sbjct: 55 ----------------------------------VAWNSVINGFAENGKPEEALALYTEM 80
Query: 414 QLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDF 473
+KP+ T ++LS CA++ AL LG+ +H Y ++ + N+ N L+++Y +CG
Sbjct: 81 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 140
Query: 474 KKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKA-GMKPDHVTFVTALSA 532
++ +FD + ++ +SW SLI G ++G G A+ F M G+ P +TFV L A
Sbjct: 141 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 200
Query: 533 CSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEY 592
CSH G+V G F +M E++IEP +EH+ C+VDLL RAG +++A + +++MP++PN
Sbjct: 201 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 260
Query: 593 IWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAK 652
IW LL +C H D+ + E QIL L +G ++LLSN+YA+ RW D ++R
Sbjct: 261 IWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQML 320
Query: 653 KKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
+ G+KK PG S +EV +V+ F G+ H D +Y L+E+ ++ +E Y
Sbjct: 321 RDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGY 371
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 125/242 (51%), Gaps = 5/242 (2%)
Query: 63 LHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVS 122
+HS I + ++ L+ LYA G V+ A KVF+ +P + L WNS+I
Sbjct: 10 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDL---VAWNSVINGFAE 66
Query: 123 HGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHV 182
+G E A+ +Y M G PDGFT+ ++ AC+ +G+ +L + VH + +++G +LH
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 183 VNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRME-LED 241
N L+ +Y + GR+E+A LFD M + +SW +++ G A N A +FK ME E
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 242 WRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTR-GCEISAEALAVVISVCADVVEVDRS 300
P +T+ +L + CG+ E E F+ MR E E ++ + A +V ++
Sbjct: 187 LLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKA 246
Query: 301 RE 302
E
Sbjct: 247 YE 248
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 124/263 (47%), Gaps = 12/263 (4%)
Query: 211 ILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFK 270
I N+++ YA D A ++F +M +D V W S+++ G +E L L+
Sbjct: 23 IYVQNSLLHLYANCGDVASAYKVFDKMPEKDL----VAWNSVINGFAENGKPEEALALYT 78
Query: 271 LMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHK 330
M ++G + + ++S CA + + + +H Y+IK G L N L+D Y +
Sbjct: 79 EMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCG 138
Query: 331 HLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISW 390
+ +A +F ++ +KN SW +LI A +G +EA ++L K ++ + L P I++
Sbjct: 139 RVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEA----IELFKYMESTEGLLPCEITF 194
Query: 391 SAVISGFASKGCGEESLELFRRMQLA-KVKPNCVTFSTVLSVCAELAALNLGRELHGYAV 449
++ + G +E E FRRM+ K++P F ++ + A + ++ + Y
Sbjct: 195 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV---KKAYEYIK 251
Query: 450 RNLMDDNILVGNGLINMYMKCGD 472
M N+++ L+ GD
Sbjct: 252 SMPMQPNVVIWRTLLGACTVHGD 274
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 259 bits (661), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 175/599 (29%), Positives = 284/599 (47%), Gaps = 57/599 (9%)
Query: 143 PDGFTLPLIIEACSHL----GSSSLCRI---VHCHAL---ELGFRNHLHVVNKLVGMYGK 192
P P I+ + L +SS RI +H H + + + +N L+ +Y K
Sbjct: 22 PKSKKTPFPIDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVK 81
Query: 193 LGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELE-DWRPNSVTWTS 251
A +LFD MP R ++SW M+ GY + ++FK M + RPN T
Sbjct: 82 CRETVRARKLFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATV 141
Query: 252 LLSSHKRCGLYDETLELFKLMRTRGC---EISAEALAVVISVCADVVEVDR--------- 299
+ S G +E + G E L + S+C+ E R
Sbjct: 142 VFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCD 201
Query: 300 ----SREIHGYVIKGGY------------EDYLFVKNALIDTYRKHKHLGD--------A 335
S + GY+ G + ED+++ + + R +L D +
Sbjct: 202 LSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHS 261
Query: 336 HNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVIS 395
V F N +E+ ALI+ Y + G A V D H N+ + ++
Sbjct: 262 RMVRFGF-NAEVEACGALINMYGKCGKVLYAQRVFD------DTHAQ---NIFLNTTIMD 311
Query: 396 GFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDD 455
+ EE+L LF +M +V PN TF+ +L+ AEL+ L G LHG +++ +
Sbjct: 312 AYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRN 371
Query: 456 NILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMI 515
+++VGN L+NMY K G + F + RD+++WN++ISG HGLG AL FD MI
Sbjct: 372 HVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMI 431
Query: 516 KAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLL 575
G P+ +TF+ L ACSH G V G + F Q++++F ++P ++HY C+V LL +AG+
Sbjct: 432 FTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMF 491
Query: 576 QEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIY 635
++A D +R PIE + W LLN+C ++ ++ ++ A + +G ++LLSNI+
Sbjct: 492 KDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIH 551
Query: 636 AANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEEL 694
A + WE A+VR +G+KK PG SWI +R + + F A + H + +Y ++E+
Sbjct: 552 AKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEV 610
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 110/227 (48%), Gaps = 4/227 (1%)
Query: 48 ITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERL 107
+ L L A Q+HS+ + + LI +Y + G V +AQ+VF+
Sbjct: 244 LRLFSNLRDLNLALQVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDT---HA 300
Query: 108 DHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIV 167
+I L +I+ A FE A+ ++ M P+ +T +++ + + L ++
Sbjct: 301 QNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLL 360
Query: 168 HCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDC 227
H L+ G+RNH+ V N LV MY K G +EDA + F GM R I++WNTM+SG + +
Sbjct: 361 HGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLG 420
Query: 228 VGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELF-KLMR 273
A F RM PN +T+ +L + G ++ L F +LM+
Sbjct: 421 REALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMK 467
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 89/454 (19%), Positives = 172/454 (37%), Gaps = 83/454 (18%)
Query: 49 TLLQQCST---LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
+ + CS +++ +Q H + F+ L+ +Y+ A +V + +P+
Sbjct: 141 VVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYC 200
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCR 165
L +++S + + G F+ +++ F + T + S+L +L
Sbjct: 201 DLS---VFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLAL 257
Query: 166 IVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNH 225
VH + GF + L+ MYGK G++ A ++FD + I T++ Y +
Sbjct: 258 QVHSRMVRFGFNAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDK 317
Query: 226 DCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALA 285
A +F +M+ ++ PN T+ LL+S
Sbjct: 318 SFEEALNLFSKMDTKEVPPNEYTFAILLNS------------------------------ 347
Query: 286 VVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK 345
A++ + + +HG V+K GY +++ V NAL++ Y K + DA F + +
Sbjct: 348 -----IAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFR 402
Query: 346 NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEE 405
++ +WN +IS G + G G E
Sbjct: 403 DIVTWNTMIS----------------------------------------GCSHHGLGRE 422
Query: 406 SLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNL-MDDNILVGNGLI 464
+LE F RM PN +TF VL C+ + + G ++ + +I ++
Sbjct: 423 ALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIV 482
Query: 465 NMYMKCGDFKKGHLVFDNIEGR-DLISWNSLISG 497
+ K G FK D+++W +L++
Sbjct: 483 GLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 258 bits (658), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 160/544 (29%), Positives = 271/544 (49%), Gaps = 74/544 (13%)
Query: 191 GKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWT 250
G + +E+A +LFD MP R SWNTM+SGYA N A +F++M N+V+W+
Sbjct: 116 GGIRFLEEARKLFDEMPSRDSFSWNTMISGYAKNRRIGEALLLFEKMP----ERNAVSWS 171
Query: 251 SLLSSHKRCGLYDETLELFKLMRTRGCE---------ISAEALAVVISVCADVVEVDRSR 301
++++ + G D + LF+ M + I E L+ V + R
Sbjct: 172 AMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGR 231
Query: 302 E---------IHGYVIKGGYE------DYL---------------FVK-----NALIDTY 326
E I GY +G E D + F K N++I Y
Sbjct: 232 EDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAY 291
Query: 327 RKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGH------ 380
K + A +F +K+++ SWN +I Y E+A A+ ++ D H
Sbjct: 292 LKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNR-DAHSWNMMV 350
Query: 381 -----------------QPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCV 423
+ + +SW+++I+ + +E+++LF RM + KP+
Sbjct: 351 SGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPH 410
Query: 424 TFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNI 483
T +++LS L L LG ++H V+ ++ D + V N LI MY +CG+ + +FD +
Sbjct: 411 TLTSLLSASTGLVNLRLGMQMHQIVVKTVIPD-VPVHNALITMYSRCGEIMESRRIFDEM 469
Query: 484 E-GRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAG 542
+ R++I+WN++I GY HG AL F M G+ P H+TFV+ L+AC+HAGLV
Sbjct: 470 KLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEA 529
Query: 543 RNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCR 602
+ F M+ ++IEP +EHY+ LV++ G +EA I+ +MP EP++ +WGALL++CR
Sbjct: 530 KAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACR 589
Query: 603 THKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQ 662
+ + + A + L + + ++LL N+YA G W+++++VR++ + K +KK G
Sbjct: 590 IYNNVGLAHVAAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGS 649
Query: 663 SWIE 666
SW++
Sbjct: 650 SWVD 653
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 182/450 (40%), Gaps = 92/450 (20%)
Query: 174 LGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRI 233
LGFR +N+++ + G + +A +F+ + R ++WNTM+SGY + A ++
Sbjct: 38 LGFRATNKELNQMI----RSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKL 93
Query: 234 FKRMELEDWRPNSVTWTSLLSSHKRCG---LYDETLELFKLMRTRGCEISAEALAVVISV 290
F M D VTW +++S + CG +E +LF M +R
Sbjct: 94 FDVMPKRD----VVTWNTMISGYVSCGGIRFLEEARKLFDEMPSRDS------------- 136
Query: 291 CADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESW 350
F N +I Y K++ +G+A +F + +N SW
Sbjct: 137 --------------------------FSWNTMISGYAKNRRIGEALLLFEKMPERNAVSW 170
Query: 351 NALISSYAESGLCEEAHAVLLQLEKSLDGHQPL-----------RPNVISWSAVISGFAS 399
+A+I+ + ++G E AV+L + + PL R + +W V+ + S
Sbjct: 171 SAMITGFCQNG--EVDSAVVLFRKMPVKDSSPLCALVAGLIKNERLSEAAW--VLGQYGS 226
Query: 400 KGCGEESLE------LFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLM 453
G E L + Q +V+ F + +C + HG R
Sbjct: 227 LVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCG---------DDHGGEFRERF 277
Query: 454 DDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDE 513
N++ N +I Y+K GD L+FD ++ RD ISWN++I GY ++A F E
Sbjct: 278 CKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSE 337
Query: 514 MIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAG 573
M D ++ +S + G V R+ F E E + ++ +
Sbjct: 338 MPNR----DAHSWNMMVSGYASVGNVELARHYF-----EKTPEKHTVSWNSIIAAYEKNK 388
Query: 574 LLQEANDIVRNMPIE---PNEYIWGALLNS 600
+EA D+ M IE P+ + +LL++
Sbjct: 389 DYKEAVDLFIRMNIEGEKPDPHTLTSLLSA 418
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/434 (21%), Positives = 180/434 (41%), Gaps = 90/434 (20%)
Query: 57 LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSI 116
L++AR+L + R F +I+ YA+ + A +F +P ER + W+++
Sbjct: 121 LEEARKLFDEM----PSRDSFSWNTMISGYAKNRRIGEALLLFEKMP-ER--NAVSWSAM 173
Query: 117 IRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIV----HCHAL 172
I +G + A+ ++ M P + PL + + L +L
Sbjct: 174 ITGFCQNGEVDSAVVLFRKM------PVKDSSPLCALVAGLIKNERLSEAAWVLGQYGSL 227
Query: 173 ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMP---------------VRTILSWNTM 217
G + ++ N L+ YG+ G++E A LFD +P + ++SWN+M
Sbjct: 228 VSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSM 287
Query: 218 VSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGC 277
+ Y D V A +F +M+ D +++W +++ + ++ LF M R
Sbjct: 288 IKAYLKVGDVVSARLLFDQMKDRD----TISWNTMIDGYVHVSRMEDAFALFSEMPNR-- 341
Query: 278 EISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHN 337
A + +++S A V V+ +R + + E + N++I Y K+K +A +
Sbjct: 342 --DAHSWNMMVSGYASVGNVELAR----HYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVD 395
Query: 338 VFFDIKNK--------------------------------------NLESWNALISSYAE 359
+F + + ++ NALI+ Y+
Sbjct: 396 LFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSR 455
Query: 360 SGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVK 419
G E+ + +++ L+ VI+W+A+I G+A G E+L LF M+ +
Sbjct: 456 CGEIMESRRIFDEMK--------LKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIY 507
Query: 420 PNCVTFSTVLSVCA 433
P+ +TF +VL+ CA
Sbjct: 508 PSHITFVSVLNACA 521
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 164/368 (44%), Gaps = 67/368 (18%)
Query: 82 LIALYARFGSVSHAQKVFNAVP-----------FERL-DHIPLWNSIIRANVSHGYFEFA 129
LI Y + G V A+ +F+ +P ER ++ WNS+I+A + G A
Sbjct: 241 LIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSA 300
Query: 130 IEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL--ELGFRNHLHVVNKLV 187
++ M+ D + +I+ H+ R+ AL E+ R+ H N +V
Sbjct: 301 RLLFDQMKD----RDTISWNTMIDGYVHVS-----RMEDAFALFSEMPNRD-AHSWNMMV 350
Query: 188 GMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSV 247
Y +G +E A F+ P + +SWN++++ Y N D A +F RM +E +P+
Sbjct: 351 SGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPH 410
Query: 248 TWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYV 307
T TSLLS+ GL + L + ++H V
Sbjct: 411 TLTSLLSAS--TGLVNLRLGM---------------------------------QMHQIV 435
Query: 308 IKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK-NKNLESWNALISSYAESGLCEEA 366
+K D + V NALI Y + + ++ +F ++K + + +WNA+I YA G EA
Sbjct: 436 VKTVIPD-VPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEA 494
Query: 367 HAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELF-RRMQLAKVKPNCVTF 425
L L S+ + + P+ I++ +V++ A G +E+ F M + K++P +
Sbjct: 495 ----LNLFGSMKSNG-IYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHY 549
Query: 426 STVLSVCA 433
S++++V +
Sbjct: 550 SSLVNVTS 557
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 257 bits (657), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 174/616 (28%), Positives = 281/616 (45%), Gaps = 90/616 (14%)
Query: 55 STLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIP--- 111
S + +A Q+H+ + Y +AA LI++Y++ G + +++VF E LD I
Sbjct: 365 SMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVF-----EDLDDIQRQN 419
Query: 112 LWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEA--CSHLGSSSLCRIVHC 169
+ N +I + AI ++ M + G D F++ ++ C +LG + VH
Sbjct: 420 IVNVMITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLG-----KQVHG 474
Query: 170 HALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVG 229
+ L+ G L V + L +Y K G +E++ +LF G+P +
Sbjct: 475 YTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFK-------------------- 514
Query: 230 ASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVIS 289
++ W S++S G E + LF M G LA V++
Sbjct: 515 ---------------DNACWASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLT 559
Query: 290 VCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLES 349
VC+ + R +EIHGY ++ G + + + +AL++ Y K L A V+
Sbjct: 560 VCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVY---------- 609
Query: 350 WNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLEL 409
D L P +S S++ISG++ G ++ L
Sbjct: 610 ----------------------------DRLPELDP--VSCSSLISGYSQHGLIQDGFLL 639
Query: 410 FRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMK 469
FR M ++ + S++L A +LG ++H Y + + VG+ L+ MY K
Sbjct: 640 FRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSK 699
Query: 470 CGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTA 529
G F I G DLI+W +LI+ Y HG + AL ++ M + G KPD VTFV
Sbjct: 700 FGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYNLMKEKGFKPDKVTFVGV 759
Query: 530 LSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEP 589
LSACSH GLV MV+++ IEP HY C+VD LGR+G L+EA + NM I+P
Sbjct: 760 LSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRSGRLREAESFINNMHIKP 819
Query: 590 NEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRI 649
+ +WG LL +C+ H + ++ + A + + L G+++ LSNI A G W++ R
Sbjct: 820 DALVWGTLLAACKIHGEVELGKVAAKKAIELEPSDAGAYISLSNILAEVGEWDEVEETRK 879
Query: 650 SAKKKGLKKTPGQSWI 665
K G++K PG S +
Sbjct: 880 LMKGTGVQKEPGWSSV 895
Score = 172 bits (436), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 151/598 (25%), Positives = 271/598 (45%), Gaps = 63/598 (10%)
Query: 49 TLLQQCSTLQQ---ARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
+++ CS LQ + + TI + + + LI ++++ A KVF +
Sbjct: 155 SVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFR----D 210
Query: 106 RLD-HIPLWNSIIRA---NVSHG-YFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGS 160
L ++ WN+II N ++G F+ E+ VG +K PD +T ++ AC+ L
Sbjct: 211 SLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQK----PDSYTYSSVLAACASLEK 266
Query: 161 SSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSG 220
++V ++ G + + V +V +Y K G M +A ++F +P +++SW M+SG
Sbjct: 267 LRFGKVVQARVIKCGAED-VFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSG 325
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEIS 280
Y ++D A IFK M N+ T TS++S+ R + E ++ + G +
Sbjct: 326 YTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGFYLD 385
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVK-----NALIDTYRKHKHLGDA 335
+ A +IS+ + ++D S ++ +ED ++ N +I ++ + K G A
Sbjct: 386 SSVAAALISMYSKSGDIDLSEQV--------FEDLDDIQRQNIVNVMITSFSQSKKPGKA 437
Query: 336 HNVFFDIKNKNLE----SWNALISSYAESGLCEEAHAVLLQ------------------- 372
+F + + L S +L+S L ++ H L+
Sbjct: 438 IRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSSLFTLYSK 497
Query: 373 ---LEKSLDGHQ--PLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFST 427
LE+S Q P + N W+++ISGF G E++ LF M P+ T +
Sbjct: 498 CGSLEESYKLFQGIPFKDNAC-WASMISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAA 556
Query: 428 VLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRD 487
VL+VC+ +L G+E+HGY +R +D + +G+ L+NMY KCG K V+D + D
Sbjct: 557 VLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELD 616
Query: 488 LISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFY 547
+S +SLISGY HGL + F +M+ +G D + L A + + + G +
Sbjct: 617 PVSCSSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHA 676
Query: 548 QMVR-EFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTH 604
+ + EP+V + L+ + + G + + + P+ W AL+ S H
Sbjct: 677 YITKIGLCTEPSVG--SSLLTMYSKFGSIDDCCKAFSQIN-GPDLIAWTALIASYAQH 731
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 119/528 (22%), Positives = 228/528 (43%), Gaps = 93/528 (17%)
Query: 77 FLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGM 136
FL L++ Y+ GS++ A K+F+ +P + D + N +I H FE ++ + M
Sbjct: 85 FLTKSLLSWYSNSGSMADAAKLFDTIP--QPDVVSC-NIMISGYKQHRLFEESLRFFSKM 141
Query: 137 RKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRM 196
GF + + +I ACS L + +V CH +++G+ + V + L+ ++ K R
Sbjct: 142 HFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRF 201
Query: 197 EDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSH 256
EDA ++F + WNT+++G N + +F M + +P+S T++S
Sbjct: 202 EDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSS----- 256
Query: 257 KRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYL 316
V++ CA + ++ + + VIK G ED +
Sbjct: 257 ------------------------------VLAACASLEKLRFGKVVQARVIKCGAED-V 285
Query: 317 FVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKS 376
FV A++D Y K H+ +A VF I N ++ SW ++S Y +S
Sbjct: 286 FVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSN--------------- 330
Query: 377 LDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELA 436
F+ +LE+F+ M+ + V+ N T ++V+S C +
Sbjct: 331 ------------------DAFS-------ALEIFKEMRHSGVEINNCTVTSVISACGRPS 365
Query: 437 ALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVF---DNIEGRDLISWNS 493
+ ++H + ++ + V LI+MY K GD VF D+I+ ++++ N
Sbjct: 366 MVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NV 423
Query: 494 LISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSA--CSHAGLVAAGRNLFYQMVR 551
+I+ + A+ F M++ G++ D + + LS C + G G L +V
Sbjct: 424 MITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVL 483
Query: 552 EFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLN 599
+ + + L L + G L+E+ + + +P + N W ++++
Sbjct: 484 DLTVGSS------LFTLYSKCGSLEESYKLFQGIPFKDNA-CWASMIS 524
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 120/239 (50%), Gaps = 7/239 (2%)
Query: 44 EDFFITLLQQCST---LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFN 100
E +L CS+ L + +++H T+ + L + L+ +Y++ GS+ A++V++
Sbjct: 551 ESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQVYD 610
Query: 101 AVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGS 160
+P LD + +S+I HG + ++ M GF D F + I++A +
Sbjct: 611 RLP--ELDPVSC-SSLISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDE 667
Query: 161 SSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSG 220
SSL VH + ++G V + L+ MY K G ++D C+ F + +++W +++
Sbjct: 668 SSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIAS 727
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDET-LELFKLMRTRGCE 278
YA + A +++ M+ + ++P+ VT+ +LS+ GL +E+ L +++ G E
Sbjct: 728 YAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIE 786
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/258 (23%), Positives = 119/258 (46%), Gaps = 18/258 (6%)
Query: 352 ALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFR 411
+L+S Y+ SG +A + + + P+V+S + +ISG+ EESL F
Sbjct: 89 SLLSWYSNSGSMADAAKLFDTIPQ---------PDVVSCNIMISGYKQHRLFEESLRFFS 139
Query: 412 RMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCG 471
+M + N +++ +V+S C+ L A + + ++ +V + LI+++ K
Sbjct: 140 KMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNL 199
Query: 472 DFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALS 531
F+ + VF + ++ WN++I+G + F EM KPD T+ + L+
Sbjct: 200 RFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLA 259
Query: 532 ACSHAGLVAAGRNLFYQMVREFRIEPTVEH-YAC--LVDLLGRAGLLQEANDIVRNMPIE 588
AC+ + + F ++V+ I+ E + C +VDL + G + EA ++ +P
Sbjct: 260 ACA-----SLEKLRFGKVVQARVIKCGAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIP-N 313
Query: 589 PNEYIWGALLNSCRTHKD 606
P+ W +L+ D
Sbjct: 314 PSVVSWTVMLSGYTKSND 331
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 10/153 (6%)
Query: 450 RNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALT 509
R L+ ++ + L++ Y G +FD I D++S N +ISGY H L + +L
Sbjct: 77 RYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLR 136
Query: 510 TFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHY----ACL 565
F +M G + + +++ + +SACS A LF ++V I+ Y + L
Sbjct: 137 FFSKMHFLGFEANEISYGSVISACS-----ALQAPLFSELVCCHTIKMGYFFYEVVESAL 191
Query: 566 VDLLGRAGLLQEANDIVRNMPIEPNEYIWGALL 598
+D+ + ++A + R+ + N Y W ++
Sbjct: 192 IDVFSKNLRFEDAYKVFRD-SLSANVYCWNTII 223
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 256 bits (655), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 149/485 (30%), Positives = 247/485 (50%), Gaps = 46/485 (9%)
Query: 226 DCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALA 285
D A ++F M +P W +L + R L E+L L+K MR G
Sbjct: 58 DMCYARQVFDEMH----KPRIFLWNTLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYP 113
Query: 286 VVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK 345
V+ + + + +H +V+K G+ V L+ Y K L A +F ++ K
Sbjct: 114 FVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVK 173
Query: 346 NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEE 405
+L ++W+A ++ G
Sbjct: 174 DL----------------------------------------VAWNAFLAVCVQTGNSAI 193
Query: 406 SLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLIN 465
+LE F +M V+ + T ++LS C +L +L +G E++ A + +D NI+V N ++
Sbjct: 194 ALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLD 253
Query: 466 MYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVT 525
M++KCG+ + ++F+ ++ R+++SW+++I GY M+G ALT F M G++P++VT
Sbjct: 254 MHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVT 313
Query: 526 FVTALSACSHAGLVAAGRNLFYQMVR--EFRIEPTVEHYACLVDLLGRAGLLQEANDIVR 583
F+ LSACSHAGLV G+ F MV+ + +EP EHYAC+VDLLGR+GLL+EA + ++
Sbjct: 314 FLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIK 373
Query: 584 NMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWED 643
MP+EP+ IWGALL +C H+D + ++ A ++ I +LLSNIYAA G+W+
Sbjct: 374 KMPVEPDTGIWGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDC 433
Query: 644 SARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
+VR +K G KK S +E K++ F+ G+ H +Y L+E+ ++ Y
Sbjct: 434 VDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGY 493
Query: 704 ELNSC 708
++C
Sbjct: 494 VPDTC 498
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 158/359 (44%), Gaps = 43/359 (11%)
Query: 55 STLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWN 114
S +Q +++H+ + T K L +L+ G + +A++VF+ + R I LWN
Sbjct: 22 SKPKQLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPR---IFLWN 78
Query: 115 SIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALEL 174
++ + V + ++ +Y MR G PD FT P +++A S LG S +H H ++
Sbjct: 79 TLFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKY 138
Query: 175 GFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIF 234
GF V +LV MY K G + A LF+ M V+ +++WN AF CV
Sbjct: 139 GFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWN------AFLAVCVQTG--- 189
Query: 235 KRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADV 294
NS LE F M + + + ++S C +
Sbjct: 190 ----------NSAI----------------ALEYFNKMCADAVQFDSFTVVSMLSACGQL 223
Query: 295 VEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALI 354
++ EI+ K + + V+NA +D + K + A +F ++K +N+ SW+ +I
Sbjct: 224 GSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMI 283
Query: 355 SSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM 413
YA +G EA + ++ ++ LRPN +++ V+S + G E F M
Sbjct: 284 VGYAMNGDSREALTLFTTMQ-----NEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLM 337
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 108/227 (47%), Gaps = 3/227 (1%)
Query: 46 FFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
F + + Q LH+ + +A +L+ +Y +FG +S A+ +F ++
Sbjct: 114 FVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESM--- 170
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCR 165
++ + WN+ + V G A+E + M D FT+ ++ AC LGS +
Sbjct: 171 QVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGE 230
Query: 166 IVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNH 225
++ A + ++ V N + M+ K G E A LF+ M R ++SW+TM+ GYA N
Sbjct: 231 EIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNG 290
Query: 226 DCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLM 272
D A +F M+ E RPN VT+ +LS+ GL +E F LM
Sbjct: 291 DSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLM 337
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 185/680 (27%), Positives = 309/680 (45%), Gaps = 89/680 (13%)
Query: 47 FITLLQQCS--TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPF 104
F+ LL S L+ + +HS I+ L L+ Y++F + A +V N+
Sbjct: 228 FVKLLGASSFLGLEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGE 287
Query: 105 ERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLC 164
+ + LW S++ V + + A+ ++ MR G P+ FT I+ CS + S
Sbjct: 288 Q---DVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFG 344
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
+ +H +++GF + V N LV MY K E
Sbjct: 345 KQIHSQTIKVGFEDSTDVGNALVDMYMKCSASE--------------------------- 377
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
V ASR+F M PN V+WT+L+ G + L M R E + L
Sbjct: 378 ---VEASRVFGAM----VSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTL 430
Query: 285 AVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN 344
+ V+ C+ + V R EIH Y+++ + + V N+L+D Y + + A NV +K
Sbjct: 431 SGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMK- 489
Query: 345 KNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGE 404
R + I+++++++ F G E
Sbjct: 490 ---------------------------------------RRDNITYTSLVTRFNELGKHE 510
Query: 405 ESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLI 464
+L + M ++ + ++ +S A L AL G+ LH Y+V++ V N L+
Sbjct: 511 MALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLV 570
Query: 465 NMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHV 524
+MY KCG + VF+ I D++SWN L+SG +G +AL+ F+EM +PD V
Sbjct: 571 DMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSV 630
Query: 525 TFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRN 584
TF+ LSACS+ L G F M + + IEP VEHY LV +LGRAG L+EA +V
Sbjct: 631 TFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVET 690
Query: 585 MPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDS 644
M ++PN I+ LL +CR + + E+ A++ L L ++LL+++Y +G+ E +
Sbjct: 691 MHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELA 750
Query: 645 ARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLG-LDEVYVILEELALQM----- 698
+ R +K L K G+S +EV+ KV++F + ++ + + +Y +E + ++
Sbjct: 751 QKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFGS 810
Query: 699 ---ANENYELNSCFNQECIY 715
NEN +S Q +Y
Sbjct: 811 PYRGNENASFHSA-KQAVVY 829
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 190/458 (41%), Gaps = 80/458 (17%)
Query: 78 LAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMR 137
L L++LY + + +A+K+F+ + + W +I A F A+ ++ M
Sbjct: 60 LCNNLLSLYLKTDGIWNARKLFDEMSHRT---VFAWTVMISAFTKSQEFASALSLFEEMM 116
Query: 138 KFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRME 197
G P+ FT ++ +C+ L S VH ++ GF + V + L +Y K G+ +
Sbjct: 117 ASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFK 176
Query: 198 DACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHK 257
+AC+LF + +SW M+S A + + M PN T+ LL +
Sbjct: 177 EACELFSSLQNADTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASS 236
Query: 258 RCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLF 317
GL + + IH +I G +
Sbjct: 237 FLGL------------------------------------EFGKTIHSNIIVRGIPLNVV 260
Query: 318 VKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSL 377
+K +L+D Y + + DA V +
Sbjct: 261 LKTSLVDFYSQFSKMEDAVRVL------------------------------------NS 284
Query: 378 DGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAA 437
G Q +V W++V+SGF +E++ F M+ ++PN T+S +LS+C+ + +
Sbjct: 285 SGEQ----DVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRS 340
Query: 438 LNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFK-KGHLVFDNIEGRDLISWNSLIS 496
L+ G+++H ++ +D+ VGN L++MYMKC + + VF + +++SW +LI
Sbjct: 341 LDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLIL 400
Query: 497 GYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACS 534
G HG + EM+K ++P+ VT L ACS
Sbjct: 401 GLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACS 438
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 175/432 (40%), Gaps = 77/432 (17%)
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHD 226
+HC ++ G +L + N L+ +Y K + +A +LFD M RT+ +W M+S + + +
Sbjct: 45 IHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQE 104
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
A +F+ M PN T++S++ S
Sbjct: 105 FASALSLFEEMMASGTHPNEFTFSSVVRS------------------------------- 133
Query: 287 VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKN 346
CA + ++ +HG VIK G+E V ++L D Y K +A +F ++N +
Sbjct: 134 ----CAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNAD 189
Query: 347 LESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEES 406
SW +IS SL G + R E+
Sbjct: 190 TISWTMMIS--------------------SLVGARKWR--------------------EA 209
Query: 407 LELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINM 466
L+ + M A V PN TF +L + L L G+ +H + + N+++ L++
Sbjct: 210 LQFYSEMVKAGVPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLNVVLKTSLVDF 268
Query: 467 YMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTF 526
Y + + V ++ +D+ W S++SG+ + A+ TF EM G++P++ T+
Sbjct: 269 YSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTY 328
Query: 527 VTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMP 586
LS CS + G+ + Q ++ E + + LVD+ + + V
Sbjct: 329 SAILSLCSAVRSLDFGKQIHSQTIK-VGFEDSTDVGNALVDMYMKCSASEVEASRVFGAM 387
Query: 587 IEPNEYIWGALL 598
+ PN W L+
Sbjct: 388 VSPNVVSWTTLI 399
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 3/214 (1%)
Query: 386 NVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELH 445
V +W+ +IS F +L LF M + PN TFS+V+ CA L ++ G +H
Sbjct: 88 TVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVH 147
Query: 446 GYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGD 505
G ++ + N +VG+ L ++Y KCG FK+ +F +++ D ISW +IS
Sbjct: 148 GSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWR 207
Query: 506 NALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACL 565
AL + EM+KAG+ P+ TFV L A S GL G+ + ++ I V L
Sbjct: 208 EALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVR-GIPLNVVLKTSL 265
Query: 566 VDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLN 599
VD + +++A ++ N E + ++W ++++
Sbjct: 266 VDFYSQFSKMEDAVRVL-NSSGEQDVFLWTSVVS 298
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 94/193 (48%), Gaps = 8/193 (4%)
Query: 409 LFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYM 468
L R +L ++ +C+ +LS C E + +G +H ++ + +N+ + N L+++Y+
Sbjct: 14 LSRTNELGNLQKSCIR---ILSFC-ESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYL 69
Query: 469 KCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVT 528
K +FD + R + +W +IS + +AL+ F+EM+ +G P+ TF +
Sbjct: 70 KTDGIWNARKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSS 129
Query: 529 ALSACSHAGLVAAGRNLFYQMVRE-FRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPI 587
+ +C+ ++ G + +++ F V + L DL + G +EA ++ ++
Sbjct: 130 VVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVG--SSLSDLYSKCGQFKEACELFSSLQ- 186
Query: 588 EPNEYIWGALLNS 600
+ W +++S
Sbjct: 187 NADTISWTMMISS 199
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 256 bits (654), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 164/560 (29%), Positives = 279/560 (49%), Gaps = 29/560 (5%)
Query: 143 PDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQL 202
PD +I AC S R VH L G + V +LV L + + +
Sbjct: 27 PDESHFISLIHACKDTAS---LRHVHAQILRRGVLSS-RVAAQLVSCSSLLKSPDYSLSI 82
Query: 203 FDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCG-- 260
F R N ++ G N + R F M +P+ +T+ +L S+ + G
Sbjct: 83 FRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFR 142
Query: 261 -----LYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDY 315
L+ TL+ F + + ++ + A ++ + ++ ++
Sbjct: 143 WLGRALHAATLKNF-------VDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKES 195
Query: 316 LFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVL-LQLE 374
+ + N LI+ Y + K + A +F + +N SW+ LI Y +SG A + L E
Sbjct: 196 ILIWNVLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPE 255
Query: 375 KSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAE 434
K NV+SW+ +I+GF+ G E ++ + M +KPN T + VLS C++
Sbjct: 256 K----------NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSK 305
Query: 435 LAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSL 494
AL G +HGY + N + + +G L++MY KCG+ VF N+ +D++SW ++
Sbjct: 306 SGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAM 365
Query: 495 ISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFR 554
I G+ +HG A+ F +M+ +G KPD V F+ L+AC ++ V G N F M ++
Sbjct: 366 IQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYA 425
Query: 555 IEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETA 614
IEPT++HY +VDLLGRAG L EA+++V NMPI P+ W AL +C+ HK + E +
Sbjct: 426 IEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAALYRACKAHKGYRRAESVS 485
Query: 615 SQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTF 674
+L L+ ++ GS++ L +A+ G +D + R+S +K+ +++ G S+IE+ ++ F
Sbjct: 486 QNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKF 545
Query: 675 SAGNIVHLGLDEVYVILEEL 694
SAG+ H E+ + L+E+
Sbjct: 546 SAGDYSHKLTQEIGLKLDEI 565
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 118/499 (23%), Positives = 210/499 (42%), Gaps = 93/499 (18%)
Query: 44 EDFFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAV- 102
E FI+L+ C R +H+Q IL +AA+L++ + S ++ +F
Sbjct: 29 ESHFISLIHACKDTASLRHVHAQ-ILRRGVLSSRVAAQLVSCSSLLKSPDYSLSIFRNSE 87
Query: 103 ---PFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLG 159
PF + N++IR + FE ++ ++ M + G PD T P ++++ S LG
Sbjct: 88 ERNPF-------VLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLG 140
Query: 160 SSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR----TILSWN 215
L R +H L+ V LV MY K G+++ A Q+F+ P R +IL WN
Sbjct: 141 FRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWN 200
Query: 216 TMVSGYAFNHDCVGASRIFKRM-------------------------ELEDWRP--NSVT 248
+++GY D A+ +F+ M +L + P N V+
Sbjct: 201 VLINGYCRAKDMHMATTLFRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVS 260
Query: 249 WTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVI 308
WT+L++ + G Y+ + + M +G + + +A V+S C+ + IHGY++
Sbjct: 261 WTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYIL 320
Query: 309 KGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHA 368
G + + AL+D Y K L A VF ++ +K++ SW A+I
Sbjct: 321 DNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMI-------------- 366
Query: 369 VLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTV 428
G+A G ++++ FR+M + KP+ V F V
Sbjct: 367 --------------------------QGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAV 400
Query: 429 LSVCAELAALNLGRELH-----GYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNI 483
L+ C + ++LG YA+ + +LV +++ + G + H + +N+
Sbjct: 401 LTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLV----VDLLGRAGKLNEAHELVENM 456
Query: 484 E-GRDLISWNSLISGYGMH 501
DL +W +L H
Sbjct: 457 PINPDLTTWAALYRACKAH 475
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 255 bits (652), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 147/460 (31%), Positives = 240/460 (52%), Gaps = 41/460 (8%)
Query: 249 WTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVI 308
W ++ + R G + L ++ M E +++V + C D+ ++ R IH ++
Sbjct: 204 WAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIV 263
Query: 309 KGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHA 368
K RK K V + N L+ Y ESGL ++A
Sbjct: 264 K-----------------RKEK----VDQVVY----------NVLLKLYMESGLFDDARK 292
Query: 369 VLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTV 428
V DG NV++W+++IS + K E LFR+MQ + + T +T+
Sbjct: 293 VF-------DGMS--ERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTI 343
Query: 429 LSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDL 488
L C+ +AAL G+E+H +++ ++ + N L++MY KCG+ + VFD + +DL
Sbjct: 344 LPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDL 403
Query: 489 ISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQ 548
SWN +++ Y ++G + + F+ MI++G+ PD +TFV LS CS GL G +LF +
Sbjct: 404 ASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFER 463
Query: 549 MVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTK 608
M EFR+ P +EHYACLVD+LGRAG ++EA ++ MP +P+ IWG+LLNSCR H +
Sbjct: 464 MKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVS 523
Query: 609 IVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVR 668
+ E A ++ L G+++++SNIYA W++ ++R K++G+KK G SW++V+
Sbjct: 524 VGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVK 583
Query: 669 KKVYTFSAGNIVHL-GLDEVYVILEELALQMANENYELNS 707
K+ F AG DE + EL + Y N+
Sbjct: 584 DKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNT 623
Score = 103 bits (257), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 156/346 (45%), Gaps = 41/346 (11%)
Query: 76 PFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVG 135
P L +KLI L++ + A+K+F+ V L +W ++ +G A+ +YV
Sbjct: 167 PKLLSKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVD 226
Query: 136 MRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGR 195
M P F++ + ++AC L + R +H ++ + V N L+ +Y + G
Sbjct: 227 MLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGL 286
Query: 196 MEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSS 255
+DA ++FDGM R +++WN+++ S+LS
Sbjct: 287 FDDARKVFDGMSERNVVTWNSLI--------------------------------SVLSK 314
Query: 256 HKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDY 315
R E LF+ M+ S L ++ C+ V + +EIH ++K +
Sbjct: 315 KVRV---HEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPD 371
Query: 316 LFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEK 375
+ + N+L+D Y K + + VF + K+L SWN +++ YA +G EE + + +
Sbjct: 372 VPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIE 431
Query: 376 SLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLA-KVKP 420
S + P+ I++ A++SG + G E L LF RM+ +V P
Sbjct: 432 S-----GVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSP 472
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 3/218 (1%)
Query: 57 LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSI 116
L+ R +H+Q + + L+ LY G A+KVF+ + ER ++ WNS+
Sbjct: 252 LRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMS-ER--NVVTWNSL 308
Query: 117 IRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGF 176
I ++ M++ TL I+ ACS + + + +H L+
Sbjct: 309 ISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKE 368
Query: 177 RNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKR 236
+ + ++N L+ MYGK G +E + ++FD M + + SWN M++ YA N + +F+
Sbjct: 369 KPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEW 428
Query: 237 MELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRT 274
M P+ +T+ +LLS GL + L LF+ M+T
Sbjct: 429 MIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKT 466
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 133/313 (42%), Gaps = 27/313 (8%)
Query: 49 TLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
T+L CS L +++H+Q + + L L+ +Y + G V ++++VF+ + +
Sbjct: 342 TILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTK 401
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL-C 164
L WN ++ +G E I ++ M + G PDG T ++ CS G +
Sbjct: 402 DLAS---WNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGL 458
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILS-WNTMVSGYAF 223
+ E L LV + G+ G++++A ++ + MP + S W ++++
Sbjct: 459 SLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRL 518
Query: 224 NHDC-VGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAE 282
+ + VG + LE P + S + + + ++D ++ ++M+ RG + A
Sbjct: 519 HGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAK--MWDNVDKIREMMKQRGVKKEAG 576
Query: 283 ALAVVISVCADVVEVDRSREIHGYVIKGGYE-----DYLFVKNALIDTYRKHKHLGDAHN 337
C+ V D+ I +V GGYE +Y V L + K + +
Sbjct: 577 --------CSWVQVKDK---IQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSV 625
Query: 338 VFFDIKNKNLESW 350
V D+ + +W
Sbjct: 626 VLHDVDEETKANW 638
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 173/638 (27%), Positives = 294/638 (46%), Gaps = 85/638 (13%)
Query: 47 FITLLQQCSTLQQ---ARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F +L+Q C+ L+ L+SQ I + ++ +Y+ G + A+++F+ V
Sbjct: 202 FTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCV- 260
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
D + WN++I ++ + E + + M G P FT +++ CS LGS SL
Sbjct: 261 -NNRDAVA-WNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSL 318
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
+++H + L + N L+ MY G M +A +F
Sbjct: 319 GKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVF-------------------- 358
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFK-LMRTRGCEISAE 282
RI PN V+W S++S G ++ + +++ L+R
Sbjct: 359 -------GRIHN--------PNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEY 403
Query: 283 ALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDI 342
+ IS A+ + +HG V K GYE +FV L+ Y K++ A VF +
Sbjct: 404 TFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFDVM 463
Query: 343 KNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGC 402
K ++ V+ W+ +I G + G
Sbjct: 464 KERD----------------------------------------VVLWTEMIVGHSRLGN 483
Query: 403 GEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNG 462
E +++ F M K + + + S+V+ C+++A L G H A+R D + V
Sbjct: 484 SELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGA 543
Query: 463 LINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPD 522
L++MY K G ++ +F DL WNS++ Y HG+ + AL+ F+++++ G PD
Sbjct: 544 LVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPD 603
Query: 523 HVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIV 582
VT+++ L+ACSH G G+ L+ QM +E I+ +HY+C+V+L+ +AGL+ EA +++
Sbjct: 604 AVTYLSLLAACSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKAGLVDEALELI 662
Query: 583 RNMPIEPNEY-IWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRW 641
P N+ +W LL++C ++ +I A QIL L+ + T + +LLSN+YA NGRW
Sbjct: 663 EQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRW 722
Query: 642 EDSARVRISAKKKGLKKTPGQSWIEV-RKKVYTFSAGN 678
ED A +R + K PG SWIEV FS+G+
Sbjct: 723 EDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGD 760
Score = 153 bits (387), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 133/563 (23%), Positives = 238/563 (42%), Gaps = 84/563 (14%)
Query: 48 ITLLQQC---STLQQARQLHSQTILT---AAYRKPFLAAKLIALYARFGSVSHAQKVFNA 101
+ L ++C + L++ARQ+H+ + AA P+ LI++Y R GS+ A+KVF+
Sbjct: 98 VELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDK 157
Query: 102 VPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSS 161
+P + S N + F + ++ P+ T +++ C+ L
Sbjct: 158 MPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVK--PNSSTFTSLVQVCAVLEDV 215
Query: 162 SLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGY 221
+ ++ ++LG+ +++ V ++GMY G +E A ++FD + R ++WNTM+ G
Sbjct: 216 LMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGS 275
Query: 222 AFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISA 281
N F+ M + P T++ +L+ + G Y L KL+ R
Sbjct: 276 LKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSY----SLGKLIHAR------ 325
Query: 282 EALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFD 341
+V AD L + NAL+D Y + +A VF
Sbjct: 326 ---IIVSDSLAD----------------------LPLDNALLDMYCSCGDMREAFYVFGR 360
Query: 342 IKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKG 401
I N NL SWN++IS +E+G E+A +L + L P RP+ ++SA IS
Sbjct: 361 IHNPNLVSWNSIISGCSENGFGEQA---MLMYRRLLRMSTP-RPDEYTFSAAISA----- 411
Query: 402 CGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGN 461
AE G+ LHG + + ++ VG
Sbjct: 412 ------------------------------TAEPERFVHGKLLHGQVTKLGYERSVFVGT 441
Query: 462 GLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKP 521
L++MY K + + VFD ++ RD++ W +I G+ G + A+ F EM + +
Sbjct: 442 TLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRS 501
Query: 522 DHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI 581
D + + + ACS ++ G +F+ + + + LVD+ G+ G + A I
Sbjct: 502 DGFSLSSVIGACSDMAMLRQGE-VFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAETI 560
Query: 582 VRNMPIEPNEYIWGALLNSCRTH 604
++ P+ W ++L + H
Sbjct: 561 F-SLASNPDLKCWNSMLGAYSQH 582
Score = 152 bits (385), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 120/495 (24%), Positives = 208/495 (42%), Gaps = 95/495 (19%)
Query: 71 AAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAI 130
AA P+ LI++Y R S+ A+KVF+ +P + + +++ Y
Sbjct: 17 AAAEYPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFE------YVSMGS 70
Query: 131 EIYVGMRKFGFFPDGFTLPL---------IIEACSHLGSSSLCRIVHCHALELG---FRN 178
++ + K G F F +PL + C + R +H L G
Sbjct: 71 SLHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATE 130
Query: 179 HLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVG-ASRIFKRM 237
+ N L+ MY + G +E A ++FD MP R ++S+N + S Y+ N D A + M
Sbjct: 131 SPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHM 190
Query: 238 ELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEV 297
E +PNS T+TSL + VCA + +V
Sbjct: 191 AFEYVKPNSSTFTSL-----------------------------------VQVCAVLEDV 215
Query: 298 DRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSY 357
++ +IK GY D + V+ +++ Y L A +F + N++ +WN +I
Sbjct: 216 LMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVG- 274
Query: 358 AESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAK 417
L+ + I E+ L FR M ++
Sbjct: 275 ------------------------SLKNDKI---------------EDGLMFFRNMLMSG 295
Query: 418 VKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGH 477
V P T+S VL+ C++L + +LG+ +H + + ++ + N L++MY CGD ++
Sbjct: 296 VDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAF 355
Query: 478 LVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGM-KPDHVTFVTALSACSHA 536
VF I +L+SWNS+ISG +G G+ A+ + +++ +PD TF A+SA +
Sbjct: 356 YVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEP 415
Query: 537 GLVAAGRNLFYQMVR 551
G+ L Q+ +
Sbjct: 416 ERFVHGKLLHGQVTK 430
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 182/423 (43%), Gaps = 77/423 (18%)
Query: 184 NKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWR 243
N L+ MY + +E A ++FD MP R I++ G S +F+
Sbjct: 26 NNLISMYVRCSSLEQARKVFDKMPQRNIVTL-------------FGLSAVFE-------- 64
Query: 244 PNSVTWTSLLSSHKRCGLYDETLEL--FKLMRTRGCEISAEALAVVISVCADVVEVDRSR 301
+ S+ SS L+ + ++L F+++ A ++ + C + + R+R
Sbjct: 65 -----YVSMGSS-----LHSQIIKLGSFQMIFFMPLNEIASSVVELTRKCVSITVLKRAR 114
Query: 302 EIHGYVIKGGY---EDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYA 358
+IH V+ G + + N LI Y + L A VF + ++N+ S+NAL S+Y+
Sbjct: 115 QIHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYS 174
Query: 359 ESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKV 418
+ P+ S++ L M V
Sbjct: 175 RN------------------------PDFASYA---------------FPLTTHMAFEYV 195
Query: 419 KPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHL 478
KPN TF++++ VCA L + +G L+ ++ DN++V ++ MY CGD +
Sbjct: 196 KPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARR 255
Query: 479 VFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGL 538
+FD + RD ++WN++I G + ++ L F M+ +G+ P T+ L+ CS G
Sbjct: 256 IFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGS 315
Query: 539 VAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALL 598
+ G+ + +++ + A L+D+ G ++EA + + PN W +++
Sbjct: 316 YSLGKLIHARIIVSDSLADLPLDNA-LLDMYCSCGDMREAFYVFGRIH-NPNLVSWNSII 373
Query: 599 NSC 601
+ C
Sbjct: 374 SGC 376
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 254 bits (649), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 171/622 (27%), Positives = 305/622 (49%), Gaps = 61/622 (9%)
Query: 50 LLQQCSTLQQARQLHSQTILTA-AYRKPFLAAKLIALYARFGS--VSHAQKVFNAVPFER 106
LQ+C L+QA+Q+H+Q ++ + +P L + + F V++ +++ F
Sbjct: 9 FLQRCVVLEQAKQVHAQLVVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKG--FNG 66
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRI 166
D W ++R H F+ +++Y+ M G P + ++ AC + + +
Sbjct: 67 HDSFS-WGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKP 125
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHD 226
+H AL+ G ++V LVG+Y +LG +E A + FD + +
Sbjct: 126 IHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEK----------------- 168
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
N+V+W SLL + G DE +F + E A + +
Sbjct: 169 ------------------NTVSWNSLLHGYLESGELDEARRVFDKIP----EKDAVSWNL 206
Query: 287 VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKN 346
+IS A ++ + + + + N LI Y + + A F + KN
Sbjct: 207 IISSYAKKGDMGNACSLFSAMPLKSPASW----NILIGGYVNCREMKLARTYFDAMPQKN 262
Query: 347 LESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEES 406
SW +IS Y + G + A + + K + + + A+I+ + G +++
Sbjct: 263 GVSWITMISGYTKLGDVQSAEELFRLMSKK---------DKLVYDAMIACYTQNGKPKDA 313
Query: 407 LELFRRM--QLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLI 464
L+LF +M + + ++P+ +T S+V+S ++L + G + Y + + + L+ LI
Sbjct: 314 LKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLI 373
Query: 465 NMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHV 524
++YMK GDF K +F N+ +D +S++++I G G++G+ A + F MI+ + P+ V
Sbjct: 374 DLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVV 433
Query: 525 TFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRN 584
TF LSA SH+GLV G F M ++ +EP+ +HY +VD+LGRAG L+EA +++++
Sbjct: 434 TFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDMLGRAGRLEEAYELIKS 492
Query: 585 MPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDS 644
MP++PN +WGALL + H + + E S + L + TG L+ IY++ GRW+D+
Sbjct: 493 MPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDPTGYLSHLAMIYSSVGRWDDA 552
Query: 645 ARVRISAKKKGLKKTPGQSWIE 666
VR S K+K L KT G SW+E
Sbjct: 553 RTVRDSIKEKKLCKTLGCSWVE 574
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 142/429 (33%), Positives = 231/429 (53%), Gaps = 40/429 (9%)
Query: 267 ELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTY 326
E L+ + G ++ E AV++ C E + + IH +FV
Sbjct: 94 EAVGLLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQ---------MFV-------- 136
Query: 327 RKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPN 386
+G A N + +K L+ YA SG + A + L+ +R +
Sbjct: 137 -----VGFALNEYLKVK---------LLILYALSGDLQTAGILFRSLK--------IR-D 173
Query: 387 VISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHG 446
+I W+A+ISG+ KG +E L ++ M+ ++ P+ TF++V C+ L L G+ H
Sbjct: 174 LIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHA 233
Query: 447 YAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDN 506
++ + NI+V + L++MY KC F GH VFD + R++I+W SLISGYG HG
Sbjct: 234 VMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSE 293
Query: 507 ALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLV 566
L F++M + G +P+ VTF+ L+AC+H GLV G FY M R++ IEP +HYA +V
Sbjct: 294 VLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMV 353
Query: 567 DLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITG 626
D LGRAG LQEA + V P + + +WG+LL +CR H + K++E A++ L L+ G
Sbjct: 354 DTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGG 413
Query: 627 SFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDE 686
++++ +N YA+ G E +++VR + G+KK PG S IE++ +V+ F + H ++
Sbjct: 414 NYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEK 473
Query: 687 VYVILEELA 695
+Y + E+
Sbjct: 474 IYKKVHEMT 482
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 159/337 (47%), Gaps = 13/337 (3%)
Query: 47 FITLLQQCSTLQQ---ARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
+ LLQ+C ++ +++H+Q + +L KL+ LYA G + A +F ++
Sbjct: 111 YAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLK 170
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
D IP WN++I V G + + IY MR+ PD +T + ACS L
Sbjct: 171 IR--DLIP-WNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEH 227
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
+ H ++ ++++ V + LV MY K D ++FD + R +++W +++SGY +
Sbjct: 228 GKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGY 287
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLM-RTRGCEISAE 282
+ + F++M+ E RPN VT+ +L++ GL D+ E F M R G E +
Sbjct: 288 HGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQ 347
Query: 283 ALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKH---KHLGDAHNVF 339
A ++ R +E + +V+K +++ V +L+ R H K L A F
Sbjct: 348 HYAAMVDTLG---RAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKF 404
Query: 340 FDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKS 376
++ N ++ + YA GL E A V ++E +
Sbjct: 405 LELDPTNGGNYVVFANGYASCGLREAASKVRRKMENA 441
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 153/380 (40%), Gaps = 47/380 (12%)
Query: 147 TLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGM 206
T ++++ C + + +H +GF + ++ KL+ +Y G ++ A LF +
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSL 169
Query: 207 PVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETL 266
+R ++ WN M+SGY + GL E L
Sbjct: 170 KIRDLIPWNAMISGYV-----------------------------------QKGLEQEGL 194
Query: 267 ELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTY 326
++ MR A V C+ + ++ + H +IK + + V +AL+D Y
Sbjct: 195 FIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMY 254
Query: 327 RKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPN 386
K D H VF + +N+ +W +LIS Y G E VL EK + + RPN
Sbjct: 255 FKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSE---VLKCFEKMKE--EGCRPN 309
Query: 387 VISWSAVISGFASKGCGEESLELFRRMQLA-KVKPNCVTFSTVLSVCAELAALNLGRELH 445
+++ V++ G ++ E F M+ ++P ++ ++ L +E +
Sbjct: 310 PVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRL---QEAY 366
Query: 446 GYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLV---FDNIEGRDLISWNSLISGYGMHG 502
+ +++ ++ V L+ G+ K L F ++ + ++ +GY G
Sbjct: 367 EFVMKSPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTNGGNYVVFANGYASCG 426
Query: 503 LGDNALTTFDEMIKAGMKPD 522
L + A +M AG+K D
Sbjct: 427 LREAASKVRRKMENAGVKKD 446
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 254 bits (648), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 168/628 (26%), Positives = 306/628 (48%), Gaps = 86/628 (13%)
Query: 46 FFITLLQQCSTLQQARQL---HSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAV 102
++ L+ CS +QL H +I L LI LY + G V HA+K+F+ +
Sbjct: 14 LYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRI 73
Query: 103 PFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSS 162
+ D + W ++I GY A+ ++ M + + FT ++++C LG
Sbjct: 74 S--KRDVVS-WTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLK 130
Query: 163 LCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYA 222
+H + +L V + L+ +Y + G+ME+A FD M R ++SWN M+ GY
Sbjct: 131 EGMQIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYT 190
Query: 223 FNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAE 282
N + +F+ M E +P+ T+ SLL
Sbjct: 191 ANACADTSFSLFQLMLTEGKKPDCFTFGSLLR---------------------------- 222
Query: 283 ALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDI 342
A ++ C ++V E+HG IK G+ + +L++ Y K L +A +
Sbjct: 223 --ASIVVKCLEIVS-----ELHGLAIKLGFGRSSALIRSLVNAYVKCGSLANAWKLHEGT 275
Query: 343 KNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKG- 401
K ++L +S +A+I+GF+ +
Sbjct: 276 KKRDL----------------------------------------LSCTALITGFSQQNN 295
Query: 402 CGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRN-LMDDNILVG 460
C ++ ++F+ M K K + V S++L +C +A++ +GR++HG+A+++ + ++ +G
Sbjct: 296 CTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALG 355
Query: 461 NGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMK 520
N LI+MY K G+ + L F+ ++ +D+ SW SLI+GYG HG + A+ ++ M +K
Sbjct: 356 NSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIK 415
Query: 521 PDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAND 580
P+ VTF++ LSACSH G G ++ M+ + IE EH +C++D+L R+G L+EA
Sbjct: 416 PNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYA 475
Query: 581 IVRNMP--IEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAAN 638
++R+ + + WGA L++CR H + ++ + A+Q+L++ + +++ L+++YAAN
Sbjct: 476 LIRSKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAAN 535
Query: 639 GRWEDSARVRISAKKKG-LKKTPGQSWI 665
G W+++ R K+ G K PG S +
Sbjct: 536 GAWDNALNTRKLMKESGSCNKAPGYSLV 563
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 253 bits (647), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 161/522 (30%), Positives = 275/522 (52%), Gaps = 58/522 (11%)
Query: 196 MEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSS 255
+ +A ++FD +P ++S ++ + V AS+ FKR+ RPN T+
Sbjct: 43 IRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTF------ 96
Query: 256 HKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDY 315
VI +V +++H Y +K G
Sbjct: 97 -----------------------------GTVIGSSTTSRDVKLGKQLHCYALKMGLASN 127
Query: 316 LFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEK 375
+FV +A+++ Y K L DA F D ++ N+ S LIS Y + EEA L L +
Sbjct: 128 VFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEA----LSLFR 183
Query: 376 SLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM-QLAKVKPNCVTFSTVLSVCAE 434
++ P R +V++W+AVI GF+ G EE++ F M + V PN TF ++ +
Sbjct: 184 AM----PER-SVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISN 238
Query: 435 LAALNLGRELHGYAVRNLMDD-NILVGNGLINMYMKCGDFKKGHLVFDNIE--GRDLISW 491
+A+ G+ +H A++ L N+ V N LI+ Y KCG+ + L F+ +E R+++SW
Sbjct: 239 IASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSW 298
Query: 492 NSLISGYGMHGLGDNALTTFDEMIK-AGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMV 550
NS+I GY +G G+ A+ F++M+K ++P++VT + L AC+HAGL+ G F + V
Sbjct: 299 NSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAV 358
Query: 551 REFRIEPTV---EHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDT 607
++ +P + EHYAC+VD+L R+G +EA +++++MP++P W ALL C+ H +
Sbjct: 359 NDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPLDPGIGFWKALLGGCQIHSNK 417
Query: 608 KIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEV 667
++ + AS+IL L+ + S+++LSN Y+A W++ + +R K+ GLK+ G SWIEV
Sbjct: 418 RLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEV 477
Query: 668 RKKVYTFSAGNIVHLGLDEVYVILEELALQMANENYELNSCF 709
R ++ F + + DEVY + L + +++ E N C+
Sbjct: 478 RDQIRVFVNADKNNELKDEVYRM-----LALVSQHLEENECW 514
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 153/334 (45%), Gaps = 15/334 (4%)
Query: 92 VSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLI 151
+ +A KVF+ +P LD I ++I V A + + + G P+ FT +
Sbjct: 43 IRNAHKVFDEIP--ELDVISA-TAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTV 99
Query: 152 IEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTI 211
I + + L + +HC+AL++G +++ V + ++ Y KL + DA + FD +
Sbjct: 100 IGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNV 159
Query: 212 LSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKL 271
+S ++SGY H+ A +F+ M + VTW +++ + G +E + F
Sbjct: 160 VSITNLISGYLKKHEFEEALSLFRAMP----ERSVVTWNAVIGGFSQTGRNEEAVNTFVD 215
Query: 272 MRTRGCEISAEA-LAVVISVCADVVEVDRSREIHGYVIKG-GYEDYLFVKNALIDTYRKH 329
M G I E+ I+ +++ + IH IK G +FV N+LI Y K
Sbjct: 216 MLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKC 275
Query: 330 KHLGDAHNVF--FDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNV 387
++ D+ F + + +N+ SWN++I YA +G EEA A+ ++ K + LRPN
Sbjct: 276 GNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTN----LRPNN 331
Query: 388 ISWSAVISGFASKGCGEESLELFRRMQLAKVKPN 421
++ V+ G +E F + PN
Sbjct: 332 VTILGVLFACNHAGLIQEGYMYFNKAVNDYDDPN 365
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 134/299 (44%), Gaps = 32/299 (10%)
Query: 357 YAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLA 416
+ +S L AH V ++ + LD VIS +AVI F + E+ + F+R+
Sbjct: 37 HIDSDLIRNAHKVFDEIPE-LD--------VISATAVIGRFVKESRHVEASQAFKRLLCL 87
Query: 417 KVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKG 476
++PN TF TV+ + LG++LH YA++ + N+ VG+ ++N Y+K
Sbjct: 88 GIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDA 147
Query: 477 HLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHA 536
FD+ +++S +LISGY + AL+ F M + + VT+ + S
Sbjct: 148 RRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQT 203
Query: 537 GLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI----VRNMPIEPNEY 592
G N F M+RE + P + C + + I ++ + N +
Sbjct: 204 GRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVF 263
Query: 593 IWGALL---NSCRTHKDTKI----VEETASQILTLNSQITGSFMLLSNIYAANGRWEDS 644
+W +L+ + C +D+ + +EE I++ NS I G YA NGR E++
Sbjct: 264 VWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWG--------YAHNGRGEEA 314
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 251 bits (642), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 175/569 (30%), Positives = 260/569 (45%), Gaps = 87/569 (15%)
Query: 184 NKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWR 243
N LV + G ME A Q+FD MP R ++SWN M+ GY N A +F M
Sbjct: 173 NTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMS----E 228
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGC-------------EISAEALAVVISV 290
N VTWTS++ + R G E LF M R E+ EAL + + +
Sbjct: 229 KNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEM 288
Query: 291 CADV---------------------VEVDR-SREIHGYVIKGGYE----DYLFVK----- 319
DV VE R ++H VI G+E D K
Sbjct: 289 KKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHM 348
Query: 320 -----------------------NALIDTYRKHKHLGDAHNVFFDIKN-KNLESWNALIS 355
N +I+ Y K+ L A +F +K+ + SW ++I
Sbjct: 349 YASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMID 408
Query: 356 SYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQL 415
Y E+G A + +L DG ++W+ +ISG E+ L M
Sbjct: 409 GYLEAGDVSRAFGLFQKLHDK-DG--------VTWTVMISGLVQNELFAEAASLLSDMVR 459
Query: 416 AKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLM--DDNILVGNGLINMYMKCGDF 473
+KP T+S +LS + L+ G+ +H + D ++++ N L++MY KCG
Sbjct: 460 CGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAI 519
Query: 474 KKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSAC 533
+ + +F + +D +SWNS+I G HGL D AL F EM+ +G KP+ VTF+ LSAC
Sbjct: 520 EDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSAC 579
Query: 534 SHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYI 593
SH+GL+ G LF M + I+P ++HY ++DLLGRAG L+EA + + +P P+ +
Sbjct: 580 SHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTV 639
Query: 594 WGALLNSC----RTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRI 649
+GALL C R I E A ++L L+ + L N+YA GR + +R
Sbjct: 640 YGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRK 699
Query: 650 SAKKKGLKKTPGQSWIEVRKKVYTFSAGN 678
KG+KKTPG SW+ V + F +G+
Sbjct: 700 EMGIKGVKKTPGCSWVVVNGRANVFLSGD 728
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 110/444 (24%), Positives = 192/444 (43%), Gaps = 64/444 (14%)
Query: 175 GFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIF 234
G N + L+ Y K G +++A LF+ MP R I++ N M++GY A +F
Sbjct: 72 GSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLF 131
Query: 235 KRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADV 294
+ M N V+WT +L++ G ++ +ELF M R +S L + D
Sbjct: 132 REMP-----KNVVSWTVMLTALCDDGRSEDAVELFDEMPERNV-VSWNTLVTGLIRNGD- 184
Query: 295 VEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALI 354
+++++++ + + NA+I Y ++ + +A +F D+ KN+ +W +++
Sbjct: 185 --MEKAKQVFDAMPSRDVVSW----NAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMV 238
Query: 355 SSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQ 414
Y G EA+ + ++ P R N++SW+A+ISGFA E+L LF M+
Sbjct: 239 YGYCRYGDVREAYRLFCEM--------PER-NIVSWTAMISGFAWNELYREALMLFLEMK 289
Query: 415 --LAKVKPNCVTFSTVLSVCAELAA--LNLGRELHGYAVRN------------------- 451
+ V PN T ++ C L LG +LH + N
Sbjct: 290 KDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWETVDHDGRLAKSLVHMY 349
Query: 452 -----------LMDD--NILVGNGLINMYMKCGDFKKGHLVFDNIEG-RDLISWNSLISG 497
L+++ ++ N +IN Y+K GD ++ +F+ ++ D +SW S+I G
Sbjct: 350 ASSGLIASAQSLLNESFDLQSCNIIINRYLKNGDLERAETLFERVKSLHDKVSWTSMIDG 409
Query: 498 YGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEP 557
Y G A F ++ D VT+ +S L A +L MVR ++P
Sbjct: 410 YLEAGDVSRAFGLFQKL----HDKDGVTWTVMISGLVQNELFAEAASLLSDMVR-CGLKP 464
Query: 558 TVEHYACLVDLLGRAGLLQEANDI 581
Y+ L+ G L + I
Sbjct: 465 LNSTYSVLLSSAGATSNLDQGKHI 488
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 16/226 (7%)
Query: 51 LQQCSTL-QQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDH 109
L++ TL ++ + LH + T+ +I Y G VS A +F + + D
Sbjct: 384 LERAETLFERVKSLHDKVSWTS----------MIDGYLEAGDVSRAFGLFQKLHDK--DG 431
Query: 110 IPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHC 169
+ W +I V + F A + M + G P T +++ + + + +HC
Sbjct: 432 VT-WTVMISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHC 490
Query: 170 HALELG--FRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDC 227
+ + L + N LV MY K G +EDA ++F M + +SWN+M+ G + +
Sbjct: 491 VIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLA 550
Query: 228 VGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMR 273
A +FK M +PNSVT+ +LS+ GL LELFK M+
Sbjct: 551 DKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMK 596
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 250 bits (638), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 142/379 (37%), Positives = 205/379 (54%), Gaps = 15/379 (3%)
Query: 320 NALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDG 379
N +I Y + ++ +A ++F + +++ SWN ++ YA G E V +
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDM------ 147
Query: 380 HQPLRPNVISWSAVISGFASKGCGEESLELFRRM-QLAKVKPNCVTFSTVLSVCAELAAL 438
P R NV SW+ +I G+A G E L F+RM V PN T + VLS CA+L A
Sbjct: 148 --PER-NVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAF 204
Query: 439 NLGRELHGYAVR---NLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLI 495
+ G+ +H Y N +D N V N LI+MY KCG + VF I+ RDLISWN++I
Sbjct: 205 DFGKWVHKYGETLGYNKVDVN--VKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMI 262
Query: 496 SGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRI 555
+G HG G AL F EM +G+ PD VTFV L AC H GLV G F M +F I
Sbjct: 263 NGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSI 322
Query: 556 EPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETAS 615
P +EH C+VDLL RAG L +A + + MP++ + IW LL + + +K I E
Sbjct: 323 MPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGEVALE 382
Query: 616 QILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFS 675
+++ L + +F++LSNIY GR++D+AR++++ + G KK G SWIE + F
Sbjct: 383 ELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFY 442
Query: 676 AGNIVHLGLDEVYVILEEL 694
+ H +E+ IL EL
Sbjct: 443 SSGEKHPRTEELQRILREL 461
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 114/260 (43%), Gaps = 46/260 (17%)
Query: 184 NKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWR 243
N ++ Y ++G M +A LFD MP R ++SWNT++ GYA D R+F M
Sbjct: 94 NTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMP----E 149
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA-LAVVISVCADVVEVDRSRE 302
N +W L+ + + G E L FK M G + +A + +V+S CA + D +
Sbjct: 150 RNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKW 209
Query: 303 IHGYVIKGGYEDY-LFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESG 361
+H Y GY + VKNALID Y K + A VF IK ++L SWN +I
Sbjct: 210 VHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMI------- 262
Query: 362 LCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPN 421
+G A+ G G E+L LF M+ + + P+
Sbjct: 263 ---------------------------------NGLAAHGHGTEALNLFHEMKNSGISPD 289
Query: 422 CVTFSTVLSVCAELAALNLG 441
VTF VL C + + G
Sbjct: 290 KVTFVGVLCACKHMGLVEDG 309
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 100/191 (52%), Gaps = 5/191 (2%)
Query: 86 YARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFG-FFPD 144
YA G + ++VF+ +P ER ++ WN +I+ +G + + M G P+
Sbjct: 131 YANIGDMEACERVFDDMP-ER--NVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPN 187
Query: 145 GFTLPLIIEACSHLGSSSLCRIVHCHALELGFRN-HLHVVNKLVGMYGKLGRMEDACQLF 203
T+ L++ AC+ LG+ + VH + LG+ ++V N L+ MYGK G +E A ++F
Sbjct: 188 DATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVF 247
Query: 204 DGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYD 263
G+ R ++SWNTM++G A + A +F M+ P+ VT+ +L + K GL +
Sbjct: 248 KGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVE 307
Query: 264 ETLELFKLMRT 274
+ L F M T
Sbjct: 308 DGLAYFNSMFT 318
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 249 bits (637), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 185/682 (27%), Positives = 304/682 (44%), Gaps = 107/682 (15%)
Query: 47 FITLLQQCSTLQQ---ARQLHSQTILTAAYRKPFLAA--KLIALYARFGSVSHAQKVFNA 101
F ++ CS++++ LH I + + ++ +I++Y++ G A+ VF
Sbjct: 292 FSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEE 351
Query: 102 VPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFF-PDGFTLPLIIEACSHLGS 160
+ + N+I+ ++G FE A I M+ PD T+ I C L
Sbjct: 352 LVCR---DVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLSF 408
Query: 161 SSLCRIVHCHALELGFRNH-LHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVS 219
S R VH + + + ++ L V+N ++ MYGK G A LF R ++SWN+M+S
Sbjct: 409 SREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMIS 468
Query: 220 GYAFNHDCVGASRIFK-------------------------------------------- 235
++ N A +FK
Sbjct: 469 AFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGD 528
Query: 236 ------RMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVV-- 287
R+E + +W S++S G + E+L F+ M G +I + + ++
Sbjct: 529 LTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREG-KIRHDLITLLGT 587
Query: 288 ISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNL 347
IS ++ V + R HG IK E ++N LI Y + K + A VF
Sbjct: 588 ISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVF-------- 639
Query: 348 ESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESL 407
LIS PN+ SW+ VIS + G E
Sbjct: 640 ----GLISD----------------------------PNLCSWNCVISALSQNKAGREVF 667
Query: 408 ELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMY 467
+LFR + K++PN +TF +LS +L + + G + H + +R N V L++MY
Sbjct: 668 QLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMY 724
Query: 468 MKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIK-AGMKPDHVTF 526
CG + G VF N + +WNS+IS +G HG+G+ A+ F E+ + M+P+ +F
Sbjct: 725 SSCGMLETGMKVFRNSGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSF 784
Query: 527 VTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMP 586
++ LSACSH+G + G + + QM +F ++P EH +VD+LGRAG L+EA + + +
Sbjct: 785 ISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIG 844
Query: 587 IEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSAR 646
+WGALL++C H DTK+ +E A + + ++ L+N Y G WE++ R
Sbjct: 845 EPQKAGVWGALLSACNYHGDTKLGKEVAEVLFEMEPDNASYYISLANTYVGLGGWEEAVR 904
Query: 647 VRISAKKKGLKKTPGQSWIEVR 668
+R + LKK PG S I+VR
Sbjct: 905 LRKMVEDNALKKLPGYSVIDVR 926
Score = 162 bits (409), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 144/579 (24%), Positives = 249/579 (43%), Gaps = 96/579 (16%)
Query: 58 QQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSII 117
++ LH I T L L+ LYA+ ++S A+ VF + E D I WN+I+
Sbjct: 205 RKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHM--EHRD-IVSWNTIM 261
Query: 118 RANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGF- 176
+++G+ +++ + M G D T +I ACS + +L +H ++ G+
Sbjct: 262 TKCLANGHPRKSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYS 321
Query: 177 -RNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFK 235
H+ V N ++ MY K G E A +F+ + R ++S N +++G+A N
Sbjct: 322 PEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAAN----------- 370
Query: 236 RMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVV--ISVCAD 293
G+++E + M++ +I + VV S+C D
Sbjct: 371 ------------------------GMFEEAFGILNQMQSVD-KIQPDIATVVSITSICGD 405
Query: 294 VVEVDRSREIHGYVIKGGYEDY-LFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNA 352
+ R +HGY ++ + L V N++ID Y K A +F +++L SWN+
Sbjct: 406 LSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNS 465
Query: 353 LISSYAESGLCEEAH-----------------AVLLQLEKSLDGHQPL------------ 383
+IS+++++G +A + +L + S D L
Sbjct: 466 MISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQK 525
Query: 384 ----------------RPNVISWSAVISGFASKGCGEESLELFRRM-QLAKVKPNCVTFS 426
++ SW++VISG AS G ESL F+ M + K++ + +T
Sbjct: 526 LGDLTSAFLRLETMSETRDLTSWNSVISGCASSGHHLESLRAFQAMSREGKIRHDLITLL 585
Query: 427 TVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGR 486
+S L + GR HG A+++L + + + N LI MY +C D + VF I
Sbjct: 586 GTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFGLISDP 645
Query: 487 DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLF 546
+L SWN +IS + G F + ++P+ +TFV LSA + G + G
Sbjct: 646 NLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAH 702
Query: 547 YQMVRE-FRIEPTVEHYACLVDLLGRAGLLQEANDIVRN 584
++R F+ P V A LVD+ G+L+ + RN
Sbjct: 703 CHLIRRGFQANPFVS--AALVDMYSSCGMLETGMKVFRN 739
Score = 149 bits (377), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 217/493 (44%), Gaps = 82/493 (16%)
Query: 58 QQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSII 117
+ R +H + + ++KL+ Y R G + + +F+ + + + +WNS+I
Sbjct: 104 ETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDEL---KEKDVIVWNSMI 160
Query: 118 RANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFR 177
A +G + A+ +++ M G D TL L A S L S C ++HC A+E G
Sbjct: 161 TALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIETGLV 220
Query: 178 NHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRM 237
+ N L+ +Y K + A +F M R I+SWNT+++
Sbjct: 221 GDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMT------------------ 262
Query: 238 ELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEV 297
L + H R ++L+ FK M G E + VIS C+ + E+
Sbjct: 263 ------------KCLANGHPR-----KSLQYFKSMTGSGQEADTVTFSCVISACSSIEEL 305
Query: 298 DRSREIHGYVIKGGY--EDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALIS 355
+HG VIK GY E ++ V N++I Y K A VF ++ +++ S NA+++
Sbjct: 306 TLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAETVFEELVCRDVISSNAILN 365
Query: 356 SYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQL 415
+A +G+ EEA +L Q++ S+D QP V+S
Sbjct: 366 GFAANGMFEEAFGILNQMQ-SVDKIQPDIATVVS-------------------------- 398
Query: 416 AKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNIL-VGNGLINMYMKCGDFK 474
+ S+C +L+ GR +HGY VR M L V N +I+MY KCG
Sbjct: 399 ------------ITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTT 446
Query: 475 KGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIK--AGMKPDHVTFVTALSA 532
+ L+F RDL+SWNS+IS + +G A F E++ + K T + L++
Sbjct: 447 QAELLFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTS 506
Query: 533 CSHAGLVAAGRNL 545
C + + G+++
Sbjct: 507 CDSSDSLIFGKSV 519
Score = 124 bits (310), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 102/459 (22%), Positives = 196/459 (42%), Gaps = 83/459 (18%)
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
R VHC AL+ G L +KL+ YG+ G + + LFD + + +
Sbjct: 107 RSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDV------------- 153
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
+ W S++++ + G Y + LF M +G E + L
Sbjct: 154 ----------------------IVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTL 191
Query: 285 AVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN 344
+ S + + + +H I+ G + NAL++ Y K ++L A VF +++
Sbjct: 192 LLAASALSSLHLSRKCSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEH 251
Query: 345 KNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGE 404
++ ++SW+ +++ + G
Sbjct: 252 RD----------------------------------------IVSWNTIMTKCLANGHPR 271
Query: 405 ESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRN--LMDDNILVGNG 462
+SL+ F+ M + + + VTFS V+S C+ + L LG LHG +++ + ++ VGN
Sbjct: 272 KSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNS 331
Query: 463 LINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAG-MKP 521
+I+MY KCGD + VF+ + RD+IS N++++G+ +G+ + A ++M ++P
Sbjct: 332 IISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQP 391
Query: 522 DHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI 581
D T V+ S C GR + VR +E ++D+ G+ GL +A ++
Sbjct: 392 DIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQA-EL 450
Query: 582 VRNMPIEPNEYIWGALLNSCR----THKDTKIVEETASQ 616
+ + W +++++ THK + +E S+
Sbjct: 451 LFKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSE 489
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 106/248 (42%), Gaps = 36/248 (14%)
Query: 44 EDFFITLLQ---QCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFN 100
E F+ LL Q + Q H I PF++A L+ +Y+ G + KVF
Sbjct: 679 EITFVGLLSASTQLGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFR 738
Query: 101 AVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFG-FFPDGFTLPLIIEACSHLG 159
++ I WNS+I A+ HG E A+E++ + P+ + ++ ACSH G
Sbjct: 739 N---SGVNSISAWNSVISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSG 795
Query: 160 SSSLCRIVHCHALELGFRNHLHVVNK------------LVGMYGKLGRMEDACQLFDGM- 206
++ G + + K +V M G+ G++ +A + G+
Sbjct: 796 -----------FIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLGRAGKLREAYEFITGIG 844
Query: 207 -PVRTILSWNTMVSGYAFNHDCVGASRIFKRM-ELEDWRPNSVTWTSLLSSHKRCGLYDE 264
P + + W ++S ++ D + + + E+E N+ + SL +++ G ++E
Sbjct: 845 EPQKAGV-WGALLSACNYHGDTKLGKEVAEVLFEMEP--DNASYYISLANTYVGLGGWEE 901
Query: 265 TLELFKLM 272
+ L K++
Sbjct: 902 AVRLRKMV 909
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 249 bits (636), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 136/455 (29%), Positives = 234/455 (51%), Gaps = 44/455 (9%)
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREI 303
P+ + S++ S + L + ++ M + S VI CAD+ + + +
Sbjct: 70 PDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGV 129
Query: 304 HGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLC 363
H + + G+ +V+ AL+ Y K + A VF + K+
Sbjct: 130 HCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKS----------------- 172
Query: 364 EEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCV 423
+++W++++SGF G +E++++F +M+ + +P+
Sbjct: 173 -----------------------IVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSA 209
Query: 424 TFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNI 483
TF ++LS CA+ A++LG +H Y + +D N+ +G LIN+Y +CGD K VFD +
Sbjct: 210 TFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKM 269
Query: 484 EGRDLISWNSLISGYGMHGLGDNALTTFDEM-IKAGMKPDHVTFVTALSACSHAGLVAAG 542
+ ++ +W ++IS YG HG G A+ F++M G P++VTFV LSAC+HAGLV G
Sbjct: 270 KETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEG 329
Query: 543 RNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEY---IWGALLN 599
R+++ +M + +R+ P VEH+ C+VD+LGRAG L EA + + +W A+L
Sbjct: 330 RSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAYKFIHQLDATGKATAPALWTAMLG 389
Query: 600 SCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKT 659
+C+ H++ + E A +++ L G ++LSNIYA +G+ ++ + +R + L+K
Sbjct: 390 ACKMHRNYDLGVEIAKRLIALEPDNPGHHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQ 449
Query: 660 PGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEEL 694
G S IEV K Y FS G+ H E+Y LE L
Sbjct: 450 VGYSVIEVENKTYMFSMGDESHQETGEIYRYLETL 484
Score = 146 bits (368), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 170/357 (47%), Gaps = 42/357 (11%)
Query: 57 LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSI 116
++Q +Q+H+ I+T R L KLI L ++++ +F +VP L L+NS+
Sbjct: 22 VKQLQQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYTHLLFLSVP---LPDDFLFNSV 78
Query: 117 IRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGF 176
I++ + Y M P +T +I++C+ L + + + VHCHA+ GF
Sbjct: 79 IKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGF 138
Query: 177 RNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKR 236
+V LV Y K G ME A Q+FD MP ++I++WN++VSG+ N A ++F +
Sbjct: 139 GLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQ 198
Query: 237 MELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVE 296
M + P+S T+ SLLS+ CA
Sbjct: 199 MRESGFEPDSATFVSLLSA-----------------------------------CAQTGA 223
Query: 297 VDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISS 356
V +H Y+I G + + + ALI+ Y + +G A VF +K N+ +W A+IS+
Sbjct: 224 VSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISA 283
Query: 357 YAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM 413
Y G ++A + ++E D P+ PN +++ AV+S A G EE +++RM
Sbjct: 284 YGTHGYGQQAVELFNKME---DDCGPI-PNNVTFVAVLSACAHAGLVEEGRSVYKRM 336
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 166/575 (28%), Positives = 261/575 (45%), Gaps = 79/575 (13%)
Query: 129 AIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVG 188
A ++V K FF T ++ S +++ ++H L+LGF + VN LV
Sbjct: 14 ATSLFVPQYKNDFFHLK-TKAFLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVI 72
Query: 189 MYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVT 248
Y KL + A +LFD M C PN V+
Sbjct: 73 SYVKLKEINTARKLFDEM--------------------C---------------EPNVVS 97
Query: 249 WTSLLSSHKRCGLYDETLELF-KLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYV 307
WTS++S + G L +F K+ R + A V C+ + E + IH +
Sbjct: 98 WTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARL 157
Query: 308 IKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAH 367
G + V ++L+D Y K + A VF
Sbjct: 158 EISGLRRNIVVSSSLVDMYGKCNDVETARRVF---------------------------- 189
Query: 368 AVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQ--LAKVKPNCVTF 425
S+ G+ NV+SW+++I+ +A G E++ELFR L + N
Sbjct: 190 -------DSMIGYGR---NVVSWTSMITAYAQNARGHEAIELFRSFNAALTSDRANQFML 239
Query: 426 STVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEG 485
++V+S C+ L L G+ HG R + N +V L++MY KCG +F I
Sbjct: 240 ASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRC 299
Query: 486 RDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNL 545
+IS+ S+I HGLG+ A+ FDEM+ + P++VT + L ACSH+GLV G
Sbjct: 300 HSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEY 359
Query: 546 FYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPI--EPNEYIWGALLNSCRT 603
M ++ + P HY C+VD+LGR G + EA ++ + + + E +WGALL++ R
Sbjct: 360 LSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLWGALLSAGRL 419
Query: 604 HKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQS 663
H +IV E + +++ N Q+T +++ LSN YA +G WEDS +R+ K+ G K S
Sbjct: 420 HGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACS 479
Query: 664 WIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQM 698
WIE + VY F AG++ E+ L++L +M
Sbjct: 480 WIENKDSVYVFHAGDLSCDESGEIERFLKDLEKRM 514
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 159/406 (39%), Gaps = 89/406 (21%)
Query: 46 FFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAV--P 103
F + L + + LH+ T+ F L+ Y + ++ A+K+F+ + P
Sbjct: 34 FLVHKLSESTNAAFTNLLHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEP 93
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRK-FGFFPDGFTLPLIIEACSHLGSSS 162
++ W S+I G + A+ ++ M + P+ +T + +ACS L S
Sbjct: 94 -----NVVSWTSVISGYNDMGKPQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESR 148
Query: 163 LCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMP--VRTILSWNTMVSG 220
+ + +H G R ++ V + LV MYGK +E A ++FD M R ++SW +M++
Sbjct: 149 IGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITA 208
Query: 221 YAFN---HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGC 277
YA N H+ + R F D R N
Sbjct: 209 YAQNARGHEAIELFRSFNAALTSD-RANQFM----------------------------- 238
Query: 278 EISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHN 337
LA VIS C+ + + + HG V +GGYE V +L+D Y K L A
Sbjct: 239 ------LASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEK 292
Query: 338 VFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGF 397
+F I+ ++ S+ ++I + A+ GL
Sbjct: 293 IFLRIRCHSVISYTSMIMAKAKHGL----------------------------------- 317
Query: 398 ASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRE 443
GE +++LF M ++ PN VT VL C+ +N G E
Sbjct: 318 -----GEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLE 358
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 157/343 (45%), Gaps = 19/343 (5%)
Query: 47 FITLLQQCSTLQQAR---QLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNA-V 102
F ++ + CS L ++R +H++ ++ R +++ L+ +Y + V A++VF++ +
Sbjct: 134 FASVFKACSALAESRIGKNIHARLEISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMI 193
Query: 103 PFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFF-----PDGFTLPLIIEACSH 157
+ R ++ W S+I A + AIE++ R F + F L +I ACS
Sbjct: 194 GYGR--NVVSWTSMITAYAQNARGHEAIELF---RSFNAALTSDRANQFMLASVISACSS 248
Query: 158 LGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTM 217
LG ++ H G+ ++ V L+ MY K G + A ++F + +++S+ +M
Sbjct: 249 LGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSM 308
Query: 218 VSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTR-G 276
+ A + A ++F M PN VT +L + GL +E LE LM + G
Sbjct: 309 IMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYG 368
Query: 277 CEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKH---LG 333
+ V+ + VD + E+ I+ G E + AL+ R H +
Sbjct: 369 VVPDSRHYTCVVDMLGRFGRVDEAYEL-AKTIEVGAEQGALLWGALLSAGRLHGRVEIVS 427
Query: 334 DAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKS 376
+A + ++ AL ++YA SG E++ ++ L++++S
Sbjct: 428 EASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRS 470
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 248 bits (632), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 173/627 (27%), Positives = 282/627 (44%), Gaps = 111/627 (17%)
Query: 57 LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSI 116
L +Q H + Y FL KL+ Y + A K+F+ +P L +I WN +
Sbjct: 52 LSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMP---LRNIVTWNIL 108
Query: 117 I------------RANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLC 164
I RA++ Y + V + F +I C+ +
Sbjct: 109 IHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMG-------LIRLCTDSTNMKAG 161
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
+HC ++ G + LV YGK G + +A ++F+ + R ++ WN
Sbjct: 162 IQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWN--------- 212
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLM-----RTRGCEI 279
+L+SS+ G+ DE L KLM R RG
Sbjct: 213 --------------------------ALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYF 246
Query: 280 SAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVF 339
+ +L +S C +++ ++IH + K Y+ + V AL++ Y K HL DA
Sbjct: 247 TFSSL---LSAC----RIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARE-- 297
Query: 340 FDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFAS 399
C E+ V NV+SW+A+I GFA
Sbjct: 298 -----------------------CFESMVV---------------RNVVSWNAMIVGFAQ 319
Query: 400 KGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILV 459
G G E++ LF +M L ++P+ +TF++VLS CA+ +A+ +++ + D + V
Sbjct: 320 NGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSV 379
Query: 460 GNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGM 519
N LI+ Y + G+ + L F +I DL+SW S+I HG + +L F+ M++ +
Sbjct: 380 ANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK-L 438
Query: 520 KPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAN 579
+PD +TF+ LSACSH GLV G F +M ++IE EHY CL+DLLGRAG + EA+
Sbjct: 439 QPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEAS 498
Query: 580 DIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANG 639
D++ +MP EP+ + A C H+ + ++ A ++L + ++ +LSN Y + G
Sbjct: 499 DVLNSMPTEPSTHALAAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVNYSILSNAYVSEG 558
Query: 640 RWEDSARVRISAKKKGLK-KTPGQSWI 665
W +A +R ++ KTPG SW+
Sbjct: 559 HWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 177/373 (47%), Gaps = 55/373 (14%)
Query: 47 FITLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F+ L++ C+ ++ QLH + F + L+ Y + G + A++VF AV
Sbjct: 145 FMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAV- 203
Query: 104 FERLDH-IPLWNSIIRANVSHGYFE--FAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGS 160
LD + LWN+++ + V +G + F + +G K F D FT ++ AC
Sbjct: 204 ---LDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR---- 256
Query: 161 SSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSG 220
+ +H ++ ++ + V L+ MY K + DA + F+ M VR ++SWN M+ G
Sbjct: 257 IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVG 316
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEIS 280
+A N + A R+F +M LE+ +P+ +T+ S+LSS
Sbjct: 317 FAQNGEGREAMRLFGQMLLENLQPDELTFASVLSS------------------------- 351
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFF 340
CA + +++ V K G D+L V N+LI +Y ++ +L +A F
Sbjct: 352 ----------CAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFH 401
Query: 341 DIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASK 400
I+ +L SW ++I + A G EE+ LQ+ +S+ Q L+P+ I++ V+S +
Sbjct: 402 SIREPDLVSWTSVIGALASHGFAEES----LQMFESM--LQKLQPDKITFLEVLSACSHG 455
Query: 401 GCGEESLELFRRM 413
G +E L F+RM
Sbjct: 456 GLVQEGLRCFKRM 468
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 111/236 (47%), Gaps = 6/236 (2%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
F +LL C ++Q +Q+H+ + +A L+ +YA+ +S A++ F ++
Sbjct: 248 FSSLLSACR-IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMV--- 303
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRI 166
+ ++ WN++I +G A+ ++ M PD T ++ +C+ + +
Sbjct: 304 VRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQ 363
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHD 226
V + G + L V N L+ Y + G + +A F + ++SW +++ A +
Sbjct: 364 VQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGF 423
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAE 282
+ ++F+ M L+ +P+ +T+ +LS+ GL E L FK M T +I AE
Sbjct: 424 AEESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRM-TEFYKIEAE 477
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 190/686 (27%), Positives = 305/686 (44%), Gaps = 124/686 (18%)
Query: 50 LLQQCSTLQQA---RQLHSQTILTAAYRKPFL---AAKLIALYARFGSVSHAQKVFNAVP 103
L+ S L+++ R LH I +K F+ ++ LI +Y + A+ VF V
Sbjct: 207 LIPAVSKLEKSDVCRCLHGLVI-----KKGFIFAFSSGLIDMYCNCADLYAAESVFEEV- 260
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
R D W +++ A +G+FE +E++ MR + + ++A +++G
Sbjct: 261 -WRKDESS-WGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVK 318
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
+H +A++ G + V L+ MY K G +E A QLF + R +
Sbjct: 319 GIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDV------------ 366
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
V+W+++++S+++ G +DE + LF+ M + +A
Sbjct: 367 -----------------------VSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVT 403
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRK--------------- 328
L V+ CA V + IH Y IK E L A+I Y K
Sbjct: 404 LTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLP 463
Query: 329 -------------HKHLGDAHNVFFDIKNKNLE-------------SWNALISSYAESGL 362
+ +GDA+ F KN L A S YA
Sbjct: 464 IKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSC 523
Query: 363 -------------CEEAHAVLLQLEKS--------LDGHQPLRPNVISWSAVISGFASKG 401
C AHA++ K L + +SW+ +++G+ G
Sbjct: 524 VYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHG 583
Query: 402 CGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGN 461
EE++ FR+M++ K +PN VTF ++ AEL+AL +G +H ++ VGN
Sbjct: 584 QAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQTPVGN 643
Query: 462 GLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKP 521
L++MY KCG + F I + ++SWN+++S Y HGL A++ F M + +KP
Sbjct: 644 SLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSMQENELKP 703
Query: 522 DHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI 581
D V+F++ LSAC HAGLV G+ +F +M +IE VEHYAC+VDLLG+AGL EA ++
Sbjct: 704 DSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGLFGEAVEM 763
Query: 582 VRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRW 641
+R M ++ + +WGALLNS R H + + Q++ L L + Y+ + R
Sbjct: 764 MRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQLVKLEP-------LNPSHYSQDRRL 816
Query: 642 EDSARVRISAKKKGLKKTPGQSWIEV 667
+ V +KK P SWIEV
Sbjct: 817 GEVNNV------SRIKKVPACSWIEV 836
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 139/545 (25%), Positives = 238/545 (43%), Gaps = 90/545 (16%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
+ +L++C + Q+H I++ KP +LI Y+ F ++ +F++V R
Sbjct: 8 LLLMLRECKNFRCLLQVHGSLIVSGL--KPH--NQLINAYSLFQRQDLSRVIFDSV---R 60
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGM-RKFGFFPDGFTLPLIIEACSHLGSSSLCR 165
+ LWNS+IR G A+ + M + G PD ++ ++AC+ GS +
Sbjct: 61 DPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACA--GSMDFKK 118
Query: 166 IVHCHAL--ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
+ H L E+G + +++ LV MY K + A Q+FD M V+ +++WNTMVSG A
Sbjct: 119 GLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQ 178
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
N G L LF MR+ +I +
Sbjct: 179 N-----------------------------------GCSSAALLLFHDMRSCCVDIDHVS 203
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
L +I + + + D R +HG VIK G+ + LID Y L A +VF ++
Sbjct: 204 LYNLIPAVSKLEKSDVCRCLHGLVIKKGF--IFAFSSGLIDMYCNCADLYAAESVFEEVW 261
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
K+ SW ++++YA +G EE
Sbjct: 262 RKDESSWGTMMAAYAHNGFFEEV------------------------------------- 284
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
LELF M+ V+ N V ++ L A + L G +H YAV+ + ++ V L
Sbjct: 285 ---LELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSL 341
Query: 464 INMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDH 523
++MY KCG+ + +F NIE RD++SW+++I+ Y G D A++ F +M++ +KP+
Sbjct: 342 MSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNA 401
Query: 524 VTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVR 583
VT + L C+ G+++ ++ IE +E ++ + + G A
Sbjct: 402 VTLTSVLQGCAGVAASRLGKSIHCYAIKA-DIESELETATAVISMYAKCGRFSPALKAFE 460
Query: 584 NMPIE 588
+PI+
Sbjct: 461 RLPIK 465
Score = 156 bits (394), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 124/543 (22%), Positives = 230/543 (42%), Gaps = 85/543 (15%)
Query: 77 FLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGM 136
++ L+ +Y + + A++VF+ + + + WN+++ +G A+ ++ M
Sbjct: 136 YIGTALVEMYCKARDLVSARQVFDKM---HVKDVVTWNTMVSGLAQNGCSSAALLLFHDM 192
Query: 137 RKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRM 196
R D +L +I A S L S +CR +H ++ GF
Sbjct: 193 RSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF-------------------- 232
Query: 197 EDACQLFDGMPVRTILSWNT-MVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSS 255
I ++++ ++ Y D A +F+ E WR + +W +++++
Sbjct: 233 --------------IFAFSSGLIDMYCNCADLYAAESVFE----EVWRKDESSWGTMMAA 274
Query: 256 HKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDY 315
+ G ++E LELF LMR ++ A A + A V ++ + IH Y ++ G
Sbjct: 275 YAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGD 334
Query: 316 LFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEK 375
+ V +L+ Y K L A +F +I++++
Sbjct: 335 VSVATSLMSMYSKCGELEIAEQLFINIEDRD----------------------------- 365
Query: 376 SLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAEL 435
V+SWSA+I+ + G +E++ LFR M +KPN VT ++VL CA +
Sbjct: 366 -----------VVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGV 414
Query: 436 AALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLI 495
AA LG+ +H YA++ ++ + +I+MY KCG F F+ + +D +++N+L
Sbjct: 415 AASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALA 474
Query: 496 SGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVRE-FR 554
GY G + A + M G+ PD T V L C+ A G ++ Q+++ F
Sbjct: 475 QGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFD 534
Query: 555 IEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETA 614
E V H L+++ + L A + E + W ++N H + T
Sbjct: 535 SECHVAH--ALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATF 592
Query: 615 SQI 617
Q+
Sbjct: 593 RQM 595
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/369 (25%), Positives = 173/369 (46%), Gaps = 47/369 (12%)
Query: 49 TLLQQCSTLQQAR---QLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
++LQ C+ + +R +H I + A +I++YA+ G S A K F +P +
Sbjct: 406 SVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLPIK 465
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCR 165
D + +N++ + G A ++Y M+ G PD T+ +++ C+ +
Sbjct: 466 --DAVA-FNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGS 522
Query: 166 IVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPV-RTILSWNTMVSGYAFN 224
V+ ++ GF + HV + L+ M+ K + A LFD ++ +SWN M++GY +
Sbjct: 523 CVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLH 582
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
A F++M++E ++PN+VT+ +++ + E+S AL
Sbjct: 583 GQAEEAVATFRQMKVEKFQPNAVTFVNIVRA--------------------AAELS--AL 620
Query: 285 AVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN 344
V +SV H +I+ G+ V N+L+D Y K + + F +I N
Sbjct: 621 RVGMSV-------------HSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISN 667
Query: 345 KNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGE 404
K + SWN ++S+YA GL A ++ L ++++ L+P+ +S+ +V+S G E
Sbjct: 668 KYIVSWNTMLSAYAAHGLASCAVSLFLSMQEN-----ELKPDSVSFLSVLSACRHAGLVE 722
Query: 405 ESLELFRRM 413
E +F M
Sbjct: 723 EGKRIFEEM 731
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 6/148 (4%)
Query: 461 NGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMI-KAGM 519
N LIN Y ++FD++ ++ WNS+I GY GL AL F M + G+
Sbjct: 37 NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGLHREALGFFGYMSEEKGI 96
Query: 520 KPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAN 579
PD +F AL AC+ + G + + ++ E +E V LV++ +A L A
Sbjct: 97 DPDKYSFTFALKACAGSMDFKKGLRI-HDLIAEMGLESDVYIGTALVEMYCKARDLVSAR 155
Query: 580 DIVRNMPIEP----NEYIWGALLNSCRT 603
+ M ++ N + G N C +
Sbjct: 156 QVFDKMHVKDVVTWNTMVSGLAQNGCSS 183
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 246 bits (628), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 175/649 (26%), Positives = 305/649 (46%), Gaps = 109/649 (16%)
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL 172
WN I+ + +G+ E + + +R +GF P+ TL L+I AC L +H + +
Sbjct: 95 WNVIVFGLLDYGFEEEGLWWFSKLRVWGFEPNTSTLVLVIHACRSLWFDG--EKIHGYVI 152
Query: 173 ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASR 232
GF V N ++ MY + A +LFD M R ++SW+ ++ Y + + V +
Sbjct: 153 RSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLK 211
Query: 233 IFKRMELE-DWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVC 291
+FK M E P+ VT TS+L + C
Sbjct: 212 LFKEMVHEAKTEPDCVTVTSVLKA-----------------------------------C 236
Query: 292 ADVVEVDRSREIHGYVIKGGYE-DYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESW 350
+ ++D R +HG+ I+ G++ +FV N+LID Y K + A VF + +N+ SW
Sbjct: 237 TVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNIVSW 296
Query: 351 NALISSYAESGLCEEAHAVL-LQLEKSLDG---------------HQPL----------- 383
N++++ + + +EA + L ++++++ QPL
Sbjct: 297 NSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIR 356
Query: 384 ---RPNVISWSAVISGFAS-------------------------------KGCGEESLEL 409
N ++ S++I + S G +E++ +
Sbjct: 357 RGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISI 416
Query: 410 FRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAV-RNLMDDNILVGNGLINMYM 468
F M + PN +T ++L+ C+ A L + HG A+ R+L ++I VG +++ Y
Sbjct: 417 FCHM---RDTPNAITVISLLNACSVSADLRTSKWAHGIAIRRSLAINDISVGTSIVDAYA 473
Query: 469 KCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVT 528
KCG + FD I +++ISW +IS Y ++GL D AL FDEM + G P+ VT++
Sbjct: 474 KCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALALFDEMKQKGYTPNAVTYLA 533
Query: 529 ALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMP-- 586
ALSAC+H GLV G +F MV E +P+++HY+C+VD+L RAG + A ++++N+P
Sbjct: 534 ALSACNHGGLVKKGLMIFKSMVEEDH-KPSLQHYSCIVDMLSRAGEIDTAVELIKNLPED 592
Query: 587 IEPNEYIWGALLNSCRTH-KDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSA 645
++ WGA+L+ CR K I E +++L L + ++L S+ +AA WED A
Sbjct: 593 VKAGASAWGAILSGCRNRFKKLIITSEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVA 652
Query: 646 RVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEEL 694
+R K++ ++ G S + F AG+ + E+ +++ L
Sbjct: 653 MMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSDSELNDVVQSL 701
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 126/530 (23%), Positives = 213/530 (40%), Gaps = 131/530 (24%)
Query: 112 LWNSIIRANVSHGYFEFAIEIYVGMRKFGF-FPDGFTLPLIIEACSHLGSSSLCRIVHCH 170
L + I +A+VS G + + Y +++ G F D F P++ +AC+ L
Sbjct: 12 LSSKIKQASVS-GKWREVVSGYSEIQRAGVQFNDPFVFPIVFKACAKL------------ 58
Query: 171 ALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGA 230
+ L N + Y K G + + FD M R +SWN +V G
Sbjct: 59 -------SWLFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFG---------- 101
Query: 231 SRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISV 290
L D+ G +E L F +R G E + L +VI
Sbjct: 102 --------LLDY-----------------GFEEEGLWWFSKLRVWGFEPNTSTLVLVIHA 136
Query: 291 CADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESW 350
C + +IHGYVI+ G+ V+N+++ Y L A +F ++ +++ SW
Sbjct: 137 CRSLWF--DGEKIHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISW 193
Query: 351 NALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELF 410
+ +I SY +S +P+ L+LF
Sbjct: 194 SVVIRSYVQS-------------------KEPVV---------------------GLKLF 213
Query: 411 RRM-QLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMD-DNILVGNGLINMYM 468
+ M AK +P+CVT ++VL C + +++GR +HG+++R D ++ V N LI+MY
Sbjct: 214 KEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYS 273
Query: 469 KCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVT 528
K D VFD R+++SWNS+++G+ + D AL F M++ ++ D VT V+
Sbjct: 274 KGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVS 333
Query: 529 ALSACSHAGLVAAGRNLFYQMVR------EFRIEPTVEHY-------------------- 562
L C +++ ++R E + ++ Y
Sbjct: 334 LLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKD 393
Query: 563 ----ACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTK 608
+ ++ L AG EA I +M PN +LLN+C D +
Sbjct: 394 VVSCSTMISGLAHAGRSDEAISIFCHMRDTPNAITVISLLNACSVSADLR 443
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 245 bits (626), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 134/413 (32%), Positives = 231/413 (55%), Gaps = 16/413 (3%)
Query: 303 IHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGL 362
+H V+K G E LF+ N LI Y + A +F ++ +KNL +WN+++ +YA+SG
Sbjct: 130 LHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGD 189
Query: 363 CEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM-QLAKVKPN 421
A V ++ + +V++WS++I G+ +G ++LE+F +M ++ K N
Sbjct: 190 VVSARLVFDEMSER---------DVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKAN 240
Query: 422 CVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVF- 480
VT +V+ CA L ALN G+ +H Y + + +++ LI+MY KCG VF
Sbjct: 241 EVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFY 300
Query: 481 -DNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLV 539
+++ D + WN++I G HG +L F +M ++ + PD +TF+ L+ACSH GLV
Sbjct: 301 RASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLV 360
Query: 540 AAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLN 599
+ F++ ++E EP EHYAC+VD+L RAGL+++A+D + MPI+P + GALLN
Sbjct: 361 KEAWH-FFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLN 419
Query: 600 SCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKT 659
C H + ++ E +++ L G ++ L+N+YA N ++ + +R + +KKG+KK
Sbjct: 420 GCINHGNLELAETVGKKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKI 479
Query: 660 PGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQM---ANENYELNSCF 709
G S +++ + F A + H D++Y +L+ M + + + N CF
Sbjct: 480 AGHSILDLDGTRHRFIAHDKTHFHSDKIYAVLQLTGAWMNLDVDYDDQDNHCF 532
Score = 161 bits (407), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 201/405 (49%), Gaps = 24/405 (5%)
Query: 50 LLQQCSTLQQARQLHSQTI-LTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPF-ERL 107
L QC ++ + ++H+ I L + +PF++ L F ++S + V A F +L
Sbjct: 14 LRHQCKSMSELYKIHTLLITLGLSEEEPFVSQTL-----SFSALSSSGDVDYAYKFLSKL 68
Query: 108 DHIPL--WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCR 165
P WN +IR + E +I +Y+ M +FG PD T P ++++ S L + L
Sbjct: 69 SDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGG 128
Query: 166 IVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNH 225
+HC ++ G L + N L+ MYG A +LFD MP + +++WN+++ YA +
Sbjct: 129 SLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSG 188
Query: 226 DCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALA 285
D V A +F M D VTW+S++ + + G Y++ LE+F M G + E
Sbjct: 189 DVVSARLVFDEMSERD----VVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTM 244
Query: 286 V-VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFF--DI 342
V VI CA + ++R + +H Y++ + ++ +LID Y K +GDA +VF+ +
Sbjct: 245 VSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASV 304
Query: 343 KNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGC 402
K + WNA+I A G E+ + ++ +S + P+ I++ +++ + G
Sbjct: 305 KETDALMWNAIIGGLASHGFIRESLQLFHKMRES-----KIDPDEITFLCLLAACSHGGL 359
Query: 403 GEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGY 447
+E+ F+ ++ + +P ++ ++ V L+ L ++ H +
Sbjct: 360 VKEAWHFFKSLKESGAEPKSEHYACMVDV---LSRAGLVKDAHDF 401
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 128/283 (45%), Gaps = 43/283 (15%)
Query: 355 SSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQ 414
S+ + SG + A+ L +L P W+ VI GF++ E+S+ ++ +M
Sbjct: 50 SALSSSGDVDYAYKFLSKLSD---------PPNYGWNFVIRGFSNSRNPEKSISVYIQML 100
Query: 415 LAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFK 474
+ P+ +T+ ++ + L+ LG LH V++ ++ ++ + N LI+MY D
Sbjct: 101 RFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQA 160
Query: 475 KGHLVFDNIEGRDLISWNS-------------------------------LISGYGMHGL 503
+FD + ++L++WNS +I GY G
Sbjct: 161 SARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGE 220
Query: 504 GDNALTTFDEMIKAG-MKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHY 562
+ AL FD+M++ G K + VT V+ + AC+H G + G+ + ++ + + + TV
Sbjct: 221 YNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTV-HRYILDVHLPLTVILQ 279
Query: 563 ACLVDLLGRAGLLQEANDIVRNMPI-EPNEYIWGALLNSCRTH 604
L+D+ + G + +A + + E + +W A++ +H
Sbjct: 280 TSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASH 322
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 117/276 (42%), Gaps = 31/276 (11%)
Query: 46 FFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
F + + S + LH + + F+ LI +Y F + A+K+F+ +P +
Sbjct: 113 FLMKSSSRLSNRKLGGSLHCSVVKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHK 172
Query: 106 RL----------------------------DHIPLWNSIIRANVSHGYFEFAIEIYVGMR 137
L + W+S+I V G + A+EI+ M
Sbjct: 173 NLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMM 232
Query: 138 KFGFF-PDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRM 196
+ G + T+ +I AC+HLG+ + + VH + L++ + + L+ MY K G +
Sbjct: 233 RMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSI 292
Query: 197 EDACQLFDGMPVRTI--LSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLS 254
DA +F V+ L WN ++ G A + + ++F +M P+ +T+ LL+
Sbjct: 293 GDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLA 352
Query: 255 SHKRCGLYDETLELFKLMRTRGCEISAEALAVVISV 290
+ GL E FK ++ G E +E A ++ V
Sbjct: 353 ACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDV 388
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 243 bits (620), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 151/479 (31%), Positives = 240/479 (50%), Gaps = 62/479 (12%)
Query: 230 ASRIFKRMELEDWRPNSVTWTSLLSS-HKRCGLYDETLELFKLMRTRGCEISAE--ALAV 286
A R+F +E +S W +L+ + +E L++ M RG E S +
Sbjct: 102 AFRVFDSIE----NHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERG-ESSPDKHTFPF 156
Query: 287 VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKN 346
V+ CA + +++H ++K G+ ++V N LI Y L A VF ++ ++
Sbjct: 157 VLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERS 216
Query: 347 LESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEES 406
L +SW+++I G + +
Sbjct: 217 L----------------------------------------VSWNSMIDALVRFGEYDSA 236
Query: 407 LELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDD---NILVGNGL 463
L+LFR MQ + +P+ T +VLS CA L +L+LG H + +R D ++LV N L
Sbjct: 237 LQLFREMQRS-FEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSL 295
Query: 464 INMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMI--KAGMKP 521
I MY KCG + VF ++ RDL SWN++I G+ HG + A+ FD M+ + ++P
Sbjct: 296 IEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRP 355
Query: 522 DHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI 581
+ VTFV L AC+H G V GR F MVR++ IEP +EHY C+VDL+ RAG + EA D+
Sbjct: 356 NSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDM 415
Query: 582 VRNMPIEPNEYIWGALLNS-CRTHKDTKIVEETASQIL-------TLNSQITGSFMLLSN 633
V +MP++P+ IW +LL++ C+ ++ EE A I+ + N +G+++LLS
Sbjct: 416 VMSMPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSR 475
Query: 634 IYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILE 692
+YA+ RW D VR + G++K PG S IE+ + F AG+ H ++Y L+
Sbjct: 476 VYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGDTSHPQTKQIYQQLK 534
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 182/366 (49%), Gaps = 55/366 (15%)
Query: 49 TLLQQCSTLQQARQLHSQTILTAAYRKP---FLAAKLIALYARFGSVSHAQKVFNAVPFE 105
+L + CS + Q +QLH+ T+ T +P FL K++ L + F V++A +VF+++
Sbjct: 53 SLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIE-- 110
Query: 106 RLDHIP-LWNSIIRA---NVSHGYFEFAIEIYVGMRKFG-FFPDGFTLPLIIEACSHLGS 160
+H +WN++IRA +VS E A +Y M + G PD T P +++AC+++
Sbjct: 111 --NHSSFMWNTLIRACAHDVSRK--EEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFG 166
Query: 161 SSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSG 220
S + VHC ++ GF ++V N L+ +YG G ++ A ++FD MP R+++SWN+M+
Sbjct: 167 FSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDA 226
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEIS 280
+ A ++F+ M+ + P+ T S+LS+ G +
Sbjct: 227 LVRFGEYDSALQLFREMQ-RSFEPDGYTMQSVLSACAGLG---------------SLSLG 270
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFF 340
A A ++ C V +D + VKN+LI+ Y K L A VF
Sbjct: 271 TWAHAFLLRKCDVDVAMD-----------------VLVKNSLIEMYCKCGSLRMAEQVFQ 313
Query: 341 DIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVI-----S 395
++ ++L SWNA+I +A G EEA ++ +D + +RPN +++ ++
Sbjct: 314 GMQKRDLASWNAMILGFATHGRAEEAMNF---FDRMVDKRENVRPNSVTFVGLLIACNHR 370
Query: 396 GFASKG 401
GF +KG
Sbjct: 371 GFVNKG 376
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 243 bits (619), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 147/532 (27%), Positives = 253/532 (47%), Gaps = 75/532 (14%)
Query: 147 TLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGM 206
T ++EAC L S + V+ + GF +++N+++ M+ K G + DA +LFD +
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 207 PVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETL 266
P R + S+ +++SG+ G Y E
Sbjct: 185 PERNLYSYYSIISGFV-----------------------------------NFGNYVEAF 209
Query: 267 ELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTY 326
ELFK+M + AV++ A + + +++H +K G D FV LID Y
Sbjct: 210 ELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMY 269
Query: 327 RKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPN 386
K + DA F + K
Sbjct: 270 SKCGDIEDARCAFECMPEKT---------------------------------------- 289
Query: 387 VISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHG 446
++W+ VI+G+A G EE+L L M+ + V + T S ++ + +LA L L ++ H
Sbjct: 290 TVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHA 349
Query: 447 YAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDN 506
+RN + I+ L++ Y K G VFD + +++ISWN+L+ GY HG G +
Sbjct: 350 SLIRNGFESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTD 409
Query: 507 ALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLV 566
A+ F++MI A + P+HVTF+ LSAC+++GL G +F M I+P HYAC++
Sbjct: 410 AVKLFEKMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMI 469
Query: 567 DLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITG 626
+LLGR GLL EA +R P++ +W ALLN+CR ++ ++ A ++ + + G
Sbjct: 470 ELLGRDGLLDEAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLG 529
Query: 627 SFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGN 678
+++++ N+Y + G+ ++A V + + KGL P +W+EV + ++F +G+
Sbjct: 530 NYVVMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGD 581
Score = 123 bits (309), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 175/358 (48%), Gaps = 44/358 (12%)
Query: 75 KPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYV 134
+ ++ +++ ++ + G + A+++F+ +P ER ++ + SII V+ G + A E++
Sbjct: 157 EQYMMNRILLMHVKCGMIIDARRLFDEIP-ER--NLYSYYSIISGFVNFGNYVEAFELFK 213
Query: 135 GMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLG 194
M + + T +++ A + LGS + + +H AL+LG ++ V L+ MY K G
Sbjct: 214 MMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCG 273
Query: 195 RMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLS 254
+EDA F+ MP +T ++WN +++GYA + S
Sbjct: 274 DIEDARCAFECMPEKTTVAWNNVIAGYALHG---------------------------YS 306
Query: 255 SHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYED 314
C LYD MR G I L+++I + + +++ +++ H +I+ G+E
Sbjct: 307 EEALCLLYD--------MRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFES 358
Query: 315 YLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLE 374
+ AL+D Y K + A VF + KN+ SWNAL+ YA G +A + E
Sbjct: 359 EIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKL---FE 415
Query: 375 KSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM-QLAKVKPNCVTFSTVLSV 431
K + + + PN +++ AV+S A G E+ E+F M ++ +KP + ++ ++ +
Sbjct: 416 KMIAAN--VAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIEL 471
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 147/319 (46%), Gaps = 10/319 (3%)
Query: 60 ARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRA 119
+QLH + F++ LI +Y++ G + A+ F +P + WN++I
Sbjct: 243 GKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKT---TVAWNNVIAG 299
Query: 120 NVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNH 179
HGY E A+ + MR G D FTL ++I + L L + H + GF +
Sbjct: 300 YALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESE 359
Query: 180 LHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMEL 239
+ LV Y K GR++ A +FD +P + I+SWN ++ GYA + A ++F++M
Sbjct: 360 IVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIA 419
Query: 240 EDWRPNSVTWTSLLSSHKRCGLYDETLELFKLM-RTRGCEISAEALAVVISVCADVVEVD 298
+ PN VT+ ++LS+ GL ++ E+F M G + A A +I + +D
Sbjct: 420 ANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLD 479
Query: 299 RSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNV---FFDIKNKNLESWNALIS 355
E ++ + + + + AL++ R ++L V + + + L ++ + +
Sbjct: 480 ---EAIAFIRRAPLKTTVNMWAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYN 536
Query: 356 SYAESGLCEEAHAVLLQLE 374
Y G EA VL LE
Sbjct: 537 MYNSMGKTAEAAGVLETLE 555
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 90/202 (44%), Gaps = 5/202 (2%)
Query: 405 ESLELFRRMQL-AKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
E+ ELF +++ K T+ ++ C L ++ + ++G+ + N + + N +
Sbjct: 105 EAFELFEILEIRCSFKVGVSTYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRI 164
Query: 464 INMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDH 523
+ M++KCG +FD I R+L S+ S+ISG+ G A F M + +
Sbjct: 165 LLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCET 224
Query: 524 VTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYAC-LVDLLGRAGLLQEANDIV 582
TF L A + G + G+ L ++ ++ T +C L+D+ + G +++A
Sbjct: 225 HTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTF--VSCGLIDMYSKCGDIEDARCAF 282
Query: 583 RNMPIEPNEYIWGALLNSCRTH 604
MP E W ++ H
Sbjct: 283 ECMP-EKTTVAWNNVIAGYALH 303
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 242 bits (618), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 141/431 (32%), Positives = 229/431 (53%), Gaps = 28/431 (6%)
Query: 263 DETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNAL 322
++T+ L+ M RG V+ C+ + HG V++ G+ +VKNAL
Sbjct: 94 EKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHGFVLNEYVKNAL 153
Query: 323 IDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLE-------- 374
I + LG A +F D + +W+++ S YA+ G +EA + ++
Sbjct: 154 ILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFDEMPYKDQVAWN 213
Query: 375 ---------KSLDGHQPL-----RPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKP 420
K +D + L +V++W+A+ISG+ + G +E+L +F+ M+ A P
Sbjct: 214 VMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEMRDAGEHP 273
Query: 421 NCVTFSTVLSVCAELAALNLGRELHGYAVRNL-MDDNILVG----NGLINMYMKCGDFKK 475
+ VT ++LS CA L L G+ LH Y + + +I VG N LI+MY KCG +
Sbjct: 274 DVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDR 333
Query: 476 GHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSH 535
VF ++ RDL +WN+LI G +H + ++ F+EM + + P+ VTF+ + ACSH
Sbjct: 334 AIEVFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSH 392
Query: 536 AGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWG 595
+G V GR F M + IEP ++HY C+VD+LGRAG L+EA V +M IEPN +W
Sbjct: 393 SGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWR 452
Query: 596 ALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKG 655
LL +C+ + + ++ + ++L++ +G ++LLSNIYA+ G+W+ +VR
Sbjct: 453 TLLGACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTR 512
Query: 656 LKKTPGQSWIE 666
+KK G S IE
Sbjct: 513 VKKPTGVSLIE 523
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 115/490 (23%), Positives = 209/490 (42%), Gaps = 82/490 (16%)
Query: 50 LLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLI--ALYARFGSVSHAQKVFNAVPFERL 107
L Q C ++ +Q+H+ ++ + +LI A + G++ +A K+F+ +P
Sbjct: 18 LWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVPGALKYAHKLFDEIP---K 74
Query: 108 DHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIV 167
+ + N ++R + E + +Y M K G PD +T +++ACS L S
Sbjct: 75 PDVSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAF 134
Query: 168 HCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDC 227
H + GF + +V N L+ + G + A +LFD ++W++M SGYA
Sbjct: 135 HGKVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKI 194
Query: 228 VGASRIFKRMELED---W------------------------RPNSVTWTSLLSSHKRCG 260
A R+F M +D W + VTW +++S + CG
Sbjct: 195 DEAMRLFDEMPYKDQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVTWNAMISGYVNCG 254
Query: 261 LYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIK-GGYEDYLFVK 319
E L +FK MR G + ++S CA + +++ + +H Y+++ ++V
Sbjct: 255 YPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVG 314
Query: 320 ----NALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEK 375
NALID Y K + A VF +K+++L +WN LI A HA
Sbjct: 315 TPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH------HA------- 361
Query: 376 SLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAEL 435
E S+E+F MQ KV PN VTF V+ C+
Sbjct: 362 ----------------------------EGSIEMFEEMQRLKVWPNEVTFIGVILACSHS 393
Query: 436 AALNLGRELHGYAVRNL--MDDNILVGNGLINMYMKCGDFKKGHLVFDNIE-GRDLISWN 492
++ GR+ +R++ ++ NI +++M + G ++ + ++++ + I W
Sbjct: 394 GRVDEGRKYFSL-MRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWR 452
Query: 493 SLISGYGMHG 502
+L+ ++G
Sbjct: 453 TLLGACKIYG 462
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 242 bits (617), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 138/443 (31%), Positives = 224/443 (50%), Gaps = 41/443 (9%)
Query: 264 ETLELFKLMRTRGCEISAEALA--VVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNA 321
E LF+ +R R + A L+ + C ++ +IHG + G+ +
Sbjct: 95 EGFRLFRSLR-RNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTT 153
Query: 322 LIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQ 381
L+D Y ++ DA VF +I ++ SWN L S Y + + + +++ +D
Sbjct: 154 LMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVD--- 210
Query: 382 PLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLG 441
GC VKP+ VT L CA L AL+ G
Sbjct: 211 -------------------GC---------------VKPDGVTCLLALQACANLGALDFG 236
Query: 442 RELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMH 501
+++H + N + + + N L++MY +CG K + VF + R+++SW +LISG M+
Sbjct: 237 KQVHDFIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMN 296
Query: 502 GLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVR-EFRIEPTVE 560
G G A+ F+EM+K G+ P+ T LSACSH+GLVA G F +M EF+I+P +
Sbjct: 297 GFGKEAIEAFNEMLKFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPNLH 356
Query: 561 HYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTL 620
HY C+VDLLGRA LL +A ++++M ++P+ IW LL +CR H D ++ E S ++ L
Sbjct: 357 HYGCVVDLLGRARLLDKAYSLIKSMEMKPDSTIWRTLLGACRVHGDVELGERVISHLIEL 416
Query: 621 NSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIV 680
++ G ++LL N Y+ G+WE +R K+K + PG S IE++ V+ F ++
Sbjct: 417 KAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVS 476
Query: 681 HLGLDEVYVILEELALQMANENY 703
H +E+Y +L E+ Q+ Y
Sbjct: 477 HPRKEEIYKMLAEINQQLKIAGY 499
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 6/216 (2%)
Query: 62 QLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANV 121
Q+H + L L+ LY+ + + A KVF+ +P + D + WN + +
Sbjct: 134 QIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIP--KRDTVS-WNVLFSCYL 190
Query: 122 SHGYFEFAIEIYVGMRK---FGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRN 178
+ + ++ M+ PDG T L ++AC++LG+ + VH E G
Sbjct: 191 RNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSG 250
Query: 179 HLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRME 238
L++ N LV MY + G M+ A Q+F GM R ++SW ++SG A N A F M
Sbjct: 251 ALNLSNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEML 310
Query: 239 LEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRT 274
P T T LLS+ GL E + F MR+
Sbjct: 311 KFGISPEEQTLTGLLSACSHSGLVAEGMMFFDRMRS 346
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 168/395 (42%), Gaps = 68/395 (17%)
Query: 44 EDFFITLLQQCSTLQQARQLHSQTILTAAYRKP-----FLAAKLIALYARFGSVSHAQKV 98
+D ++L+ + RQ+H+ + T+ R FL+ ++L R ++++ +V
Sbjct: 11 DDHLLSLIVSSTGKLHLRQIHALLLRTSLIRNSDVFHHFLSRLALSLIPR--DINYSCRV 68
Query: 99 FNAVPFERLDHIPLWNSIIRA-NVSHGYFEFAIEIYVGMRKFGFFP-----DGFTLPLII 152
F+ L H N++IRA ++S E ++ +R+ P F L I
Sbjct: 69 FSQRLNPTLSHC---NTMIRAFSLSQTPCE-GFRLFRSLRRNSSLPANPLSSSFALKCCI 124
Query: 153 EACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTIL 212
++ LG +H GF + ++ L+ +Y DAC++FD +P R
Sbjct: 125 KSGDLLGGLQ----IHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKR--- 177
Query: 213 SWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLM 272
++V+W L S + R + L LF M
Sbjct: 178 --------------------------------DTVSWNVLFSCYLRNKRTRDVLVLFDKM 205
Query: 273 R--TRGCEISAEALAVVISV--CADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRK 328
+ GC + + + ++++ CA++ +D +++H ++ + G L + N L+ Y +
Sbjct: 206 KNDVDGC-VKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSR 264
Query: 329 HKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVI 388
+ A+ VF+ ++ +N+ SW ALIS A +G +EA ++ K + P
Sbjct: 265 CGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKF-----GISPEEQ 319
Query: 389 SWSAVISGFASKGCGEESLELFRRMQLA--KVKPN 421
+ + ++S + G E + F RM+ K+KPN
Sbjct: 320 TLTGLLSACSHSGLVAEGMMFFDRMRSGEFKIKPN 354
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 6/223 (2%)
Query: 381 QPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKP-NCVTFSTVLSVCAELAALN 439
Q L P + + +I F+ E LFR ++ P N ++ S L C + L
Sbjct: 71 QRLNPTLSHCNTMIRAFSLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLL 130
Query: 440 LGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYG 499
G ++HG + + L+ L+++Y C + VFD I RD +SWN L S Y
Sbjct: 131 GGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYL 190
Query: 500 MHGLGDNALTTFDEM---IKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIE 556
+ + L FD+M + +KPD VT + AL AC++ G + G+ + + + E +
Sbjct: 191 RNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQV-HDFIDENGLS 249
Query: 557 PTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLN 599
+ LV + R G + +A + M E N W AL++
Sbjct: 250 GALNLSNTLVSMYSRCGSMDKAYQVFYGMR-ERNVVSWTALIS 291
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 168/627 (26%), Positives = 296/627 (47%), Gaps = 95/627 (15%)
Query: 78 LAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMR 137
LA LI +YA+ G++ +A++VF+ +P ER ++ W ++I V G + ++ M
Sbjct: 98 LANFLINMYAKCGNILYARQVFDTMP-ER--NVVSWTALITGYVQAGNEQEGFCLFSSML 154
Query: 138 KFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRME 197
F P+ FTL ++ +C + + VH AL+LG ++V N ++ MYG R
Sbjct: 155 SHCF-PNEFTLSSVLTSCRYEPG----KQVHGLALKLGLHCSIYVANAVISMYG---RCH 206
Query: 198 DACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHK 257
D ++ +W +F+ ++ + N VTW S++++ +
Sbjct: 207 DGAAAYE--------AWT-----------------VFEAIKFK----NLVTWNSMIAAFQ 237
Query: 258 RCGLYDETLELFKLMRTRGCEISAEALAVVISVCA------DVVEVDRSR---EIHGYVI 308
C L + + +F M + G A ++++C+ D+V + S+ ++H +
Sbjct: 238 CCNLGKKAIGVFMRMHSDGVGFDR---ATLLNICSSLYKSSDLVPNEVSKCCLQLHSLTV 294
Query: 309 KGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHA 368
K G V ALI Y ++ LE + + E C +
Sbjct: 295 KSGLVTQTEVATALIKVY-----------------SEMLEDYTDCYKLFMEMSHCRD--- 334
Query: 369 VLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTV 428
+++W+ +I+ FA E ++ LF +++ K+ P+ TFS+V
Sbjct: 335 ------------------IVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSV 375
Query: 429 LSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDL 488
L CA L +H ++ + ++ N LI+ Y KCG VFD+++ RD+
Sbjct: 376 LKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDV 435
Query: 489 ISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQ 548
+SWNS++ Y +HG D+ L F +M + PD TF+ LSACSHAG V G +F
Sbjct: 436 VSWNSMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRS 492
Query: 549 MVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTK 608
M + P + HYAC++D+L RA EA ++++ MP++P+ +W ALL SCR H +T+
Sbjct: 493 MFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTR 552
Query: 609 IVEETASQILTLNSQITG-SFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEV 667
+ + A ++ L S++ +SNIY A G + ++ + ++K P SW E+
Sbjct: 553 LGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSWTEI 612
Query: 668 RKKVYTFSAGNIVHLGLDEVYVILEEL 694
KV+ F++G + VY L+ L
Sbjct: 613 GNKVHEFASGGRHRPDKEAVYRELKRL 639
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/477 (22%), Positives = 198/477 (41%), Gaps = 74/477 (15%)
Query: 58 QQARQLHSQTILTAAYRKPFLAAKLIALYARF---GSVSHAQKVFNAVPFERLDHIPLWN 114
+ +Q+H + + ++A +I++Y R + A VF A+ F+ L WN
Sbjct: 174 EPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNL---VTWN 230
Query: 115 SIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSS---------LCR 165
S+I A + AI +++ M G GF ++ CS L SS C
Sbjct: 231 SMIAAFQCCNLGKKAIGVFMRMHSDGV---GFDRATLLNICSSLYKSSDLVPNEVSKCCL 287
Query: 166 IVHCHALELGFRNHLHVVNKLVGMYGK-LGRMEDACQLFDGMP-VRTILSWNTMVSGYAF 223
+H ++ G V L+ +Y + L D +LF M R I++WN +++ +A
Sbjct: 288 QLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCRDIVAWNGIITAFAV 347
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
+D A +F ++ E P+ T++S
Sbjct: 348 -YDPERAIHLFGQLRQEKLSPDWYTFSS-------------------------------- 374
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
V+ CA +V + IH VIKGG+ + N+LI Y K L VF D+
Sbjct: 375 ---VLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMD 431
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
++++ SWN+++ +Y+ G + V +++ + P+ ++ A++S + G
Sbjct: 432 SRDVVSWNSMLKAYSLHGQVDSILPVFQKMD--------INPDSATFIALLSACSHAGRV 483
Query: 404 EESLELFRRM-QLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNL-MDDNILVGN 461
EE L +FR M + + P ++ V+ + + E+ ++ + MD + +V
Sbjct: 484 EEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEV----IKQMPMDPDAVVWI 539
Query: 462 GLINMYMKCGDFKKGHLVFDN----IEGRDLISWNSLISGYGMHGLGDNALTTFDEM 514
L+ K G+ + G L D +E + +S+ + + Y G + A + EM
Sbjct: 540 ALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEM 596
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 114/237 (48%), Gaps = 19/237 (8%)
Query: 49 TLLQQCSTLQQAR------------QLHSQTILTAAYRKPFLAAKLIALYAR-FGSVSHA 95
TLL CS+L ++ QLHS T+ + + +A LI +Y+ +
Sbjct: 263 TLLNICSSLYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDC 322
Query: 96 QKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEAC 155
K+F + R I WN II A + E AI ++ +R+ PD +T +++AC
Sbjct: 323 YKLFMEMSHCR--DIVAWNGIITAFAVYDP-ERAIHLFGQLRQEKLSPDWYTFSSVLKAC 379
Query: 156 SHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWN 215
+ L ++ +H ++ GF + N L+ Y K G ++ ++FD M R ++SWN
Sbjct: 380 AGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWN 439
Query: 216 TMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLM 272
+M+ Y+ + +F++M D P+S T+ +LLS+ G +E L +F+ M
Sbjct: 440 SMLKAYSLHGQVDSILPVFQKM---DINPDSATFIALLSACSHAGRVEEGLRIFRSM 493
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 3/114 (2%)
Query: 424 TFSTVLSVCAELAALNLGRELHGYAVRN--LMDDNILVGNGLINMYMKCGDFKKGHLVFD 481
++ + CAE L G LH + + + N+++ N LINMY KCG+ VFD
Sbjct: 61 AYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFD 120
Query: 482 NIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSH 535
+ R+++SW +LI+GY G F M+ P+ T + L++C +
Sbjct: 121 TMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF-PNEFTLSSVLTSCRY 173
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 239 bits (610), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 160/565 (28%), Positives = 278/565 (49%), Gaps = 62/565 (10%)
Query: 44 EDFFITLLQQCSTLQQ---ARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVF- 99
E F+ +L+ S ++ ++QLH + + LI+ Y + G+ A+++F
Sbjct: 215 ESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQ 274
Query: 100 NAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLG 159
+A ++ I WN+II A A++++V M + GF P+ T ++ S +
Sbjct: 275 DAGSWD----IVSWNAIICATAKSENPLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQ 330
Query: 160 SSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVS 219
S R +H ++ G + + N L+ Y K G +ED+ FD + + I+ WN ++S
Sbjct: 331 LLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLS 390
Query: 220 GYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEI 279
GYA N D +F +M +RP T+++ L S
Sbjct: 391 GYA-NKDGPICLSLFLQMLQMGFRPTEYTFSTALKS------------------------ 425
Query: 280 SAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVF 339
C V +++H +++ GYED +V ++L+ +Y K++ + DA +
Sbjct: 426 -----------CC----VTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDAL-LL 469
Query: 340 FDIKN--KNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGF 397
D + ++ N + Y+ G E+ ++ LE+ P+ +SW+ I+
Sbjct: 470 LDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQ---------PDTVSWNIAIAAC 520
Query: 398 ASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVR-NLMDDN 456
+ EE +ELF+ M + ++P+ TF ++LS+C++L L LG +HG + + +
Sbjct: 521 SRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCAD 580
Query: 457 ILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIK 516
V N LI+MY KCG + VF+ ++LI+W +LIS G+HG G AL F E +
Sbjct: 581 TFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLS 640
Query: 517 AGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQ 576
G KPD V+F++ L+AC H G+V G LF +M +++ +EP ++HY C VDLL R G L+
Sbjct: 641 LGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARNGYLK 699
Query: 577 EANDIVRNMPIEPNEYIWGALLNSC 601
EA ++R MP + +W L+ C
Sbjct: 700 EAEHLIREMPFPADAPVWRTFLDGC 724
Score = 166 bits (420), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 150/611 (24%), Positives = 277/611 (45%), Gaps = 130/611 (21%)
Query: 45 DFFITLLQQC---STLQQARQLHSQTI-LTAAYRKP-FLAAKLIALYARFGSVSHAQKVF 99
D ++LL C + + + LH+ +I L + +P ++ +I+LY + G VS A KVF
Sbjct: 13 DRVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVF 72
Query: 100 NAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLG 159
+ +P ER + +N+II+ +G + A ++ MR FG+ P+ T+ ++ +C+ L
Sbjct: 73 DQMP-ER--NKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASLD 128
Query: 160 SSSLCRIVHCHALELG-FRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMV 218
+ ++ H +L+ G F V L+ +YG+L +E A Q+F+ MP +++ +WN M+
Sbjct: 129 VRAGTQL-HGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMM 187
Query: 219 SGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCE 278
S L H+ G E + F+ + G
Sbjct: 188 S---------------------------------LLGHR--GFLKECMFFFRELVRMGAS 212
Query: 279 ISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNV 338
++ + V+ + V ++D S+++H K G + + V N+LI Y K + A +
Sbjct: 213 LTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERM 272
Query: 339 FFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFA 398
F D + ++ SWNA+I + A+S PL+
Sbjct: 273 FQDAGSWDIVSWNAIICATAKS-------------------ENPLK-------------- 299
Query: 399 SKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNIL 458
+L+LF M PN T+ +VL V + + L+ GR++HG ++N + I+
Sbjct: 300 -------ALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIV 352
Query: 459 VGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAG 518
+GN LI+ Y KCG+ + L FD I ++++ WN+L+SGY G L+ F +M++ G
Sbjct: 353 LGNALIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKD-GPICLSLFLQMLQMG 411
Query: 519 MKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEA 578
+P TF TAL +C C+ + LQ+
Sbjct: 412 FRPTEYTFSTALKSC------------------------------CVTE-------LQQL 434
Query: 579 NDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFML--LSNIYA 636
+ ++ M E N+Y+ +L+ R++ +++ + A +L S T L ++ IY+
Sbjct: 435 HSVIVRMGYEDNDYVLSSLM---RSYAKNQLMND-ALLLLDWASGPTSVVPLNIVAGIYS 490
Query: 637 ANGRWEDSARV 647
G++ +S ++
Sbjct: 491 RRGQYHESVKL 501
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 139/607 (22%), Positives = 243/607 (40%), Gaps = 117/607 (19%)
Query: 48 ITLLQQCSTL--QQARQLHSQTILTAAYR-KPFLAAKLIALYARFGSVSHAQKVFNAVPF 104
++ L C++L + QLH ++ + F+ L+ LY R + A++VF +PF
Sbjct: 118 VSGLLSCASLDVRAGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPF 177
Query: 105 ERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLC 164
+ L+ WN ++ G+ + + + + + G + +++ S + +
Sbjct: 178 KSLE---TWNHMMSLLGHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDIS 234
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
+ +HC A + G + VVN L+ YGK G A ++F I+SWN ++ A +
Sbjct: 235 KQLHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKS 294
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
+ + A ++F M + PN T+ S+L + L++ C
Sbjct: 295 ENPLKALKLFVSMPEHGFSPNQGTYVSVLG-------------VSSLVQLLSC------- 334
Query: 285 AVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN 344
R+IHG +IK G E + + NALID Y K +L D+ F I++
Sbjct: 335 ---------------GRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCFDYIRD 379
Query: 345 KNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGE 404
KN+ WNAL+S YA G
Sbjct: 380 KNIVCWNALLSGYANKD-----------------------------------------GP 398
Query: 405 ESLELFRRMQLAKVKPNCVTFSTVLSVC--AELAALN-----LGRE---------LHGYA 448
L LF +M +P TFST L C EL L+ +G E + YA
Sbjct: 399 ICLSLFLQMLQMGFRPTEYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYA 458
Query: 449 VRNLMDDNILV------------GNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLIS 496
LM+D +L+ N + +Y + G + + + +E D +SWN I+
Sbjct: 459 KNQLMNDALLLLDWASGPTSVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIA 518
Query: 497 GYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVR-EFRI 555
+ + F M+++ ++PD TFV+ LS CS + G ++ + + +F
Sbjct: 519 ACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSC 578
Query: 556 EPTVEHYAC--LVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEET 613
T + C L+D+ G+ G ++ + E N W AL++ H + E
Sbjct: 579 ADT---FVCNVLIDMYGKCGSIRSVMKVFEETR-EKNLITWTALISCLGIHGYGQEALEK 634
Query: 614 ASQILTL 620
+ L+L
Sbjct: 635 FKETLSL 641
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/460 (29%), Positives = 228/460 (49%), Gaps = 40/460 (8%)
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREI 303
P+ V + S+ + R E LF + G ++ CA ++ R++
Sbjct: 92 PDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQL 151
Query: 304 HGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLC 363
H +K G +D ++V LI+ Y + + + A VF I
Sbjct: 152 HCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRI--------------------- 190
Query: 364 EEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCV 423
+ P V+ ++A+I+G+A + E+L LFR MQ +KPN +
Sbjct: 191 -------------------VEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEI 231
Query: 424 TFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNI 483
T +VLS CA L +L+LG+ +H YA ++ + V LI+M+ KCG +F+ +
Sbjct: 232 TLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKM 291
Query: 484 EGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGR 543
+D +W+++I Y HG + ++ F+ M ++PD +TF+ L+ACSH G V GR
Sbjct: 292 RYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGR 351
Query: 544 NLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRT 603
F QMV +F I P+++HY +VDLL RAG L++A + + +PI P +W LL +C +
Sbjct: 352 KYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSS 411
Query: 604 HKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQS 663
H + + E+ + +I L+ G +++LSN+YA N +WE +R K + K PG S
Sbjct: 412 HNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCS 471
Query: 664 WIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
IEV V+ F +G+ V +++ L+E+ ++ Y
Sbjct: 472 SIEVNNVVHEFFSGDGVKSATTKLHRALDEMVKELKLSGY 511
Score = 116 bits (291), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 180/374 (48%), Gaps = 57/374 (15%)
Query: 48 ITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARF---GSVSHAQKVFNAVPF 104
I L+ +C++L++ Q+ + I + F+A KLI S+S+A+ +F A+
Sbjct: 33 ILLISKCNSLRELMQIQAYAIKSHIEDVSFVA-KLINFCTESPTESSMSYARHLFEAMSE 91
Query: 105 ERLDHIPLWNSIIRANVSHGYFEFA-----IEIYVGMRKFGFFPDGFTLPLIIEACSHLG 159
I ++NS+ R GY F ++V + + G PD +T P +++AC+
Sbjct: 92 P---DIVIFNSMAR-----GYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAK 143
Query: 160 SSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVS 219
+ R +HC +++LG ++++V L+ MY + ++ A +FD + ++ +N M++
Sbjct: 144 ALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMIT 203
Query: 220 GYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEI 279
GYA + A +F+ M+ + +PN +T S+LSS
Sbjct: 204 GYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSS------------------------ 239
Query: 280 SAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVF 339
CA + +D + IH Y K + Y+ V ALID + K L DA ++F
Sbjct: 240 -----------CALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIF 288
Query: 340 FDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFAS 399
++ K+ ++W+A+I +YA G E++ +L E+ + ++P+ I++ +++ +
Sbjct: 289 EKMRYKDTQAWSAMIVAYANHGKAEKS---MLMFERMRS--ENVQPDEITFLGLLNACSH 343
Query: 400 KGCGEESLELFRRM 413
G EE + F +M
Sbjct: 344 TGRVEEGRKYFSQM 357
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 114/234 (48%), Gaps = 10/234 (4%)
Query: 47 FITLLQQCST---LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAV- 102
F +LL+ C+ L++ RQLH ++ ++ LI +Y V A+ VF+ +
Sbjct: 132 FPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIV 191
Query: 103 -PFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSS 161
P + +N++I A+ ++ M+ P+ TL ++ +C+ LGS
Sbjct: 192 EPC-----VVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSL 246
Query: 162 SLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGY 221
L + +H +A + F ++ V L+ M+ K G ++DA +F+ M + +W+ M+ Y
Sbjct: 247 DLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAY 306
Query: 222 AFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTR 275
A + + +F+RM E+ +P+ +T+ LL++ G +E + F M ++
Sbjct: 307 ANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSK 360
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/408 (32%), Positives = 227/408 (55%), Gaps = 21/408 (5%)
Query: 302 EIHGYVIKGGYEDYLFVKNALIDTYRK--HKHLGDAHNVFFDIKNKNLESWNALISSY-- 357
+ H + K GY Y + + + YR+ +L ++F + + + N +I S
Sbjct: 51 QAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLARRLLLWFLSLSPGVCNINLIIESLMK 110
Query: 358 -AESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM-QL 415
ESGL ++ L + D NVI+W+ +I G+ EE+L+ + M
Sbjct: 111 IGESGLAKKV------LRNASD------QNVITWNLMIGGYVRNVQYEEALKALKNMLSF 158
Query: 416 AKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKK 475
+KPN +F++ L+ CA L L+ + +H + + ++ N ++ + L+++Y KCGD
Sbjct: 159 TDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGT 218
Query: 476 GHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSH 535
VF +++ D+ WN++I+G+ HGL A+ F EM + PD +TF+ L+ CSH
Sbjct: 219 SREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSH 278
Query: 536 AGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWG 595
GL+ G+ F M R F I+P +EHY +VDLLGRAG ++EA +++ +MPIEP+ IW
Sbjct: 279 CGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWR 338
Query: 596 ALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKG 655
+LL+S RT+K+ ++ E I L+ +G ++LLSNIY++ +WE + +VR K+G
Sbjct: 339 SLLSSSRTYKNPELGEIA---IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEG 395
Query: 656 LKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
++K G+SW+E ++ F AG+ H+ +Y +LE L + ++ +
Sbjct: 396 IRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIYKVLEGLIQKTKSQGF 443
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 154/385 (40%), Gaps = 62/385 (16%)
Query: 142 FPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQ 201
D L ++E+C +S H +LG+ + ++ V Y + R A
Sbjct: 27 LTDHGMLKQVLESCKAPSNSKCVLQAHAQIFKLGYGTYPSLLVSTVAAYRRCNRSYLA-- 84
Query: 202 LFDGMPVRTILSWNTMVSGYAFNHDCV-------GASRIFKRMELEDWRPNSVTWTSLLS 254
R +L W +S N + + G S + K++ N +TW ++
Sbjct: 85 -------RRLLLWFLSLSPGVCNINLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIG 137
Query: 255 SHKRCGLYDETLELFKLMRT-RGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYE 313
+ R Y+E L+ K M + + + + A ++ CA + ++ ++ +H +I G E
Sbjct: 138 GYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIE 197
Query: 314 DYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQL 373
+ +AL+D Y K +G + VF+ +K ++ WNA+I+ +A GL EA
Sbjct: 198 LNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEA------- 250
Query: 374 EKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCA 433
+ +F M+ V P+ +TF +L+ C+
Sbjct: 251 ---------------------------------IRVFSEMEAEHVSPDSITFLGLLTTCS 277
Query: 434 ELAALNLGRELHGYAVRNLMDDNILVGNG-LINMYMKCGDFKKGHLVFDNIEGR-DLISW 491
L G+E G R L G ++++ + G K+ + + +++ D++ W
Sbjct: 278 HCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIW 337
Query: 492 NSLISG---YGMHGLGDNALTTFDE 513
SL+S Y LG+ A+ +
Sbjct: 338 RSLLSSSRTYKNPELGEIAIQNLSK 362
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 4/195 (2%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKF-G 140
+I + G A+KV + ++ WN +I V + +E A++ M F
Sbjct: 104 IIESLMKIGESGLAKKVLRNASDQ---NVITWNLMIGGYVRNVQYEEALKALKNMLSFTD 160
Query: 141 FFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDAC 200
P+ F+ + AC+ LG + VH ++ G + + + LV +Y K G + +
Sbjct: 161 IKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSR 220
Query: 201 QLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCG 260
++F + + WN M++G+A + A R+F ME E P+S+T+ LL++ CG
Sbjct: 221 EVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCG 280
Query: 261 LYDETLELFKLMRTR 275
L +E E F LM R
Sbjct: 281 LLEEGKEYFGLMSRR 295
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 92/198 (46%), Gaps = 18/198 (9%)
Query: 47 FITLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F + L C+ L A+ +HS I + L++ L+ +YA+ G + +++VF +V
Sbjct: 168 FASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSV- 226
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
+ + + +WN++I +HG AI ++ M PD T ++ CSH G
Sbjct: 227 --KRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEE 284
Query: 164 CR-IVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRT-ILSWNTMVSGY 221
+ + + L +V + G+ GR+++A +L + MP+ ++ W +++S
Sbjct: 285 GKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLS-- 342
Query: 222 AFNHDCVGASRIFKRMEL 239
+SR +K EL
Sbjct: 343 --------SSRTYKNPEL 352
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 237 bits (605), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 174/670 (25%), Positives = 298/670 (44%), Gaps = 116/670 (17%)
Query: 49 TLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP----- 103
+LL + TL A+ +H+Q + R + + + LY + GSV +A ++F+ +P
Sbjct: 14 SLLSKSPTL--AKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTI 71
Query: 104 ------------------FERLDHIP-----LWNSIIRANVSHGYFEFAIEIYVGMRKFG 140
+ D +P WN++I VS G+ E+ I ++ M+++
Sbjct: 72 TWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWE 131
Query: 141 FFPDGFTLPLI--IEACSHLGSSSLCRIVHCHALELGF-RNHLHVVNKLVGMYGKLGRME 197
P FT ++ + C G +H +A+ G R +L V N ++ MY +LG +
Sbjct: 132 IRPTEFTFSILASLVTCVRHGEQ-----IHGNAICSGVSRYNLVVWNSVMDMYRRLGVFD 186
Query: 198 DACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHK 257
A +F M R ++SWN L+ S
Sbjct: 187 YALSVFLTMEDRDVVSWNC-----------------------------------LILSCS 211
Query: 258 RCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLF 317
G + L+ F LMR + +++V+S+C+D+ E+ + ++ IK G+
Sbjct: 212 DSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSI 271
Query: 318 VKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSL 377
V A ID + K L D+ +F + LE W+++ LC
Sbjct: 272 VLGAGIDMFSKCNRLDDSVKLF-----RELEKWDSV--------LC-------------- 304
Query: 378 DGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAA 437
+++I ++ CGE++L LF V+P+ TFS+VLS
Sbjct: 305 -------------NSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLS-SMNAVM 350
Query: 438 LNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISG 497
L+ G ++H ++ D + V L+ MY K G VF +G+DLI WN++I G
Sbjct: 351 LDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMG 410
Query: 498 YGMHGLGDNALTTFDEMI-KAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIE 556
+ +L F++++ +KPD VT + L AC +AG V G +F M + +
Sbjct: 411 LARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVN 470
Query: 557 PTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQ 616
P EHYAC+++LL R G++ EA DI +P EP+ +IW +L + DT++ E A
Sbjct: 471 PGNEHYACIIELLCRVGMINEAKDIADKIPFEPSSHIWEPILCASLDLGDTRLAETVAKT 530
Query: 617 ILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSA 676
+L + + +++L IY RWE+S ++R + + LK G S I + V++F A
Sbjct: 531 MLESEPKSSFPYLVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEA 590
Query: 677 GNI-VHLGLD 685
+ +H G D
Sbjct: 591 DQLQIHGGHD 600
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/402 (21%), Positives = 173/402 (43%), Gaps = 49/402 (12%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLA-AKLIALYARFGSVSHAQKVFNAVPFE 105
F L + ++ Q+H I + R + ++ +Y R G +A VF + E
Sbjct: 139 FSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVF--LTME 196
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCR 165
D + WN +I + G E A++ + MR+ PD +T+ +++ CS L S +
Sbjct: 197 DRDVVS-WNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGK 255
Query: 166 IVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNH 225
+++GF ++ V+ + M+ K R++D+ +LF + + N+M+ Y+++
Sbjct: 256 QALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWH- 314
Query: 226 DCVG--ASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
C G A R+F + RP+ T++S+LSS
Sbjct: 315 -CCGEDALRLFILAMTQSVRPDKFTFSSVLSS---------------------------- 345
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
+ V +D ++H VIK G++ V +L++ Y K + A VF
Sbjct: 346 --------MNAVMLDHGADVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTD 397
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
K+L WN +I A + E+ A+ QL +Q L+P+ ++ ++ G
Sbjct: 398 GKDLIFWNTVIMGLARNSRAVESLAIFNQLLM----NQSLKPDRVTLMGILVACCYAGFV 453
Query: 404 EESLELFRRMQLAK-VKPNCVTFSTVLSVCAELAALNLGREL 444
E +++F M+ A V P ++ ++ + + +N +++
Sbjct: 454 NEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINEAKDI 495
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 158/582 (27%), Positives = 278/582 (47%), Gaps = 58/582 (9%)
Query: 44 EDFFITLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFN 100
E F +L+ C L+ RQLH + L ++ +Y + +S A++VF+
Sbjct: 162 ETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFD 221
Query: 101 AV--PFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHL 158
+ P + WN I+R + G+ + A+ ++ M + P T+ ++ ACS
Sbjct: 222 EIVNPSD-----VSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSRS 276
Query: 159 GSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMV 218
+ + +++H A++L V + MY K R+E A ++FD + + SW + +
Sbjct: 277 LALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAM 336
Query: 219 SGYAFNHDCVGASRIFKRMELEDWRP--NSVTWTSLLSSHKRCGLYDETLELFKLMRTRG 276
SGYA + G +R + EL D P N V+W ++L + +DE L+ LMR
Sbjct: 337 SGYAMS----GLTR--EARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEI 390
Query: 277 CEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAH 336
I L +++VC+ + +V ++ HG++ + GY+ + V NAL+D Y K
Sbjct: 391 ENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGK-------- 442
Query: 337 NVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISG 396
G + A+ Q+ + D +SW+A+++G
Sbjct: 443 -----------------------CGTLQSANIWFRQMSELRDE--------VSWNALLTG 471
Query: 397 FASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDN 456
A G E++L F MQ+ + KP+ T +T+L+ CA + ALNLG+ +HG+ +R+ +
Sbjct: 472 VARVGRSEQALSFFEGMQV-EAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKID 530
Query: 457 ILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIK 516
+++ +++MY KC F VF RDLI WNS+I G +G F +
Sbjct: 531 VVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLEN 590
Query: 517 AGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQ 576
G+KPDHVTF+ L AC G V G F M ++ I P VEHY C+++L + G L
Sbjct: 591 EGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLH 650
Query: 577 EANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQIL 618
+ + + MP +P + + ++C+ ++ +K+ A +++
Sbjct: 651 QLEEFLLLMPFDPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
Score = 189 bits (479), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 149/571 (26%), Positives = 276/571 (48%), Gaps = 62/571 (10%)
Query: 50 LLQQCST---LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
L + CS+ + QAR++ S + + FL + I Y + G V A+++F +P ER
Sbjct: 67 LFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEEMP-ER 125
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRI 166
WN++I A +G + ++ M + G + ++++C + L R
Sbjct: 126 --DGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQ 183
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGY---AF 223
+HC ++ G+ ++ + +V +YGK M DA ++FD + + +SWN +V Y F
Sbjct: 184 LHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGF 243
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
N + V FK +EL + RP + T +S++ + R LE+ K++ A
Sbjct: 244 NDEAV--VMFFKMLEL-NVRPLNHTVSSVMLACSR----SLALEVGKVI---------HA 287
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
+AV +SV AD V V ++ D Y K L A VF +
Sbjct: 288 IAVKLSVVADTV----------------------VSTSVFDMYVKCDRLESARRVFDQTR 325
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
+K+L+SW + +S YA SGL EA + L P R N++SW+A++ G+
Sbjct: 326 SKDLKSWTSAMSGYAMSGLTREA--------RELFDLMPER-NIVSWNAMLGGYVHAHEW 376
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
+E+L+ M+ + VT +L+VC+ ++ + +G++ HG+ R+ D N++V N L
Sbjct: 377 DEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANAL 436
Query: 464 INMYMKCGDFKKGHLVFDNI-EGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPD 522
++MY KCG + ++ F + E RD +SWN+L++G G + AL+ F+ M + KP
Sbjct: 437 LDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALSFFEGM-QVEAKPS 495
Query: 523 HVTFVTALSACSHAGLVAAGRNLFYQMVRE-FRIEPTVEHYACLVDLLGRAGLLQEANDI 581
T T L+ C++ + G+ + ++R+ ++I+ + +VD+ + A ++
Sbjct: 496 KYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIR--GAMVDMYSKCRCFDYAIEV 553
Query: 582 VRNMPIEPNEYIWGALLNSCRTHKDTKIVEE 612
+ + +W +++ C + +K V E
Sbjct: 554 FKEAATR-DLILWNSIIRGCCRNGRSKEVFE 583
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 236 bits (603), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/355 (34%), Positives = 209/355 (58%), Gaps = 17/355 (4%)
Query: 351 NALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELF 410
L+ +Y+++G A+ + ++ P+R +V SW+A+I+G S E++EL+
Sbjct: 148 TTLLDAYSKNGDLISAYKLFDEM--------PVR-DVASWNALIAGLVSGNRASEAMELY 198
Query: 411 RRMQLAKVKPNCVTFSTVLSVCAELAALNLGREL-HGYAVRNLMDDNILVGNGLINMYMK 469
+RM+ ++ + VT L C+ L + G + HGY+ +DN++V N I+MY K
Sbjct: 199 KRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS-----NDNVIVSNAAIDMYSK 253
Query: 470 CGDFKKGHLVFDNIEGR-DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVT 528
CG K + VF+ G+ +++WN++I+G+ +HG AL FD++ G+KPD V+++
Sbjct: 254 CGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDVSYLA 313
Query: 529 ALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIE 588
AL+AC HAGLV G ++F M + +E ++HY C+VDLL RAG L+EA+DI+ +M +
Sbjct: 314 ALTACRHAGLVEYGLSVFNNMACK-GVERNMKHYGCVVDLLSRAGRLREAHDIICSMSMI 372
Query: 589 PNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVR 648
P+ +W +LL + + D ++ E + +I + G F+LLSN+YAA GRW+D RVR
Sbjct: 373 PDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDVGRVR 432
Query: 649 ISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
+ K +KK PG S+IE + ++ F + H E+Y ++E+ ++ + Y
Sbjct: 433 DDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREIYEKIDEIRFKIREDGY 487
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/412 (25%), Positives = 167/412 (40%), Gaps = 65/412 (15%)
Query: 46 FFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYA--RFGSVSHAQKVFNAVP 103
+ T++Q+C + Q +QL S + ++ FL ++L+ A FG +S A ++F +P
Sbjct: 5 YMETMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLERCAISPFGDLSFAVQIFRYIP 64
Query: 104 FERLDHIPL---WNSIIRANVSHGYFEFAIEIYVGMRKFGFFP------DGFTLPLIIEA 154
PL WN+IIR + A Y M + D T ++A
Sbjct: 65 ------KPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKA 118
Query: 155 CSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSW 214
C+ SS +HC G + L+ Y K G + A +LFD MPVR + SW
Sbjct: 119 CARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASW 178
Query: 215 NTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRT 274
N +++G + A ++KRME E R + VT + L + G E +F
Sbjct: 179 NALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIF----- 233
Query: 275 RGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGD 334
HGY D + V NA ID Y K +
Sbjct: 234 -----------------------------HGYS-----NDNVIVSNAAIDMYSKCGFVDK 259
Query: 335 AHNVFFDIK-NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAV 393
A+ VF K++ +WN +I+ +A G EAH L +K D ++P+ +S+ A
Sbjct: 260 AYQVFEQFTGKKSVVTWNTMITGFAVHG---EAHRALEIFDKLED--NGIKPDDVSYLAA 314
Query: 394 ISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELH 445
++ G E L +F M V+ N + V+ + + L RE H
Sbjct: 315 LTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRAGRL---REAH 363
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 11/227 (4%)
Query: 384 RPNVISWSAVISGFASKGCGEESLELFRRM------QLAKVKPNCVTFSTVLSVCAELAA 437
+P W+A+I GFA + +R M A + + +T S L CA
Sbjct: 65 KPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALC 124
Query: 438 LNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISG 497
+ +LH R + + L+ L++ Y K GD + +FD + RD+ SWN+LI+G
Sbjct: 125 SSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAG 184
Query: 498 YGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEP 557
A+ + M G++ VT V AL ACSH G V G N+F+ + I
Sbjct: 185 LVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYSNDNVIVS 244
Query: 558 TVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTH 604
+D+ + G + +A + + + W ++ H
Sbjct: 245 NAA-----IDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVH 286
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 236 bits (602), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 143/477 (29%), Positives = 232/477 (48%), Gaps = 55/477 (11%)
Query: 244 PNSVTWTSLLSSHKRCGLYDETLE-LFKLMRTRGCEISAEALAVVISVCADVVEVDRSRE 302
P + W L+ + L+ ET+ L ++MRT +V+ VC++ +V
Sbjct: 72 PGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSS 131
Query: 303 IHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGL 362
+HG V++ G++ + V + +D Y K K L A VF ++ +N SW AL+ +Y +SG
Sbjct: 132 VHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGE 191
Query: 363 CEEAHAVL-LQLEKSL-------DG---------------HQPLRP-------------- 385
EEA ++ L E++L DG P R
Sbjct: 192 LEEAKSMFDLMPERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDIISYTSMIDGYAKG 251
Query: 386 ----------------NVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVL 429
+V +WSA+I G+A G E+ ++F M VKP+ ++
Sbjct: 252 GDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLM 311
Query: 430 SVCAELAALNLGRELHGYAVRNLMD-DNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDL 488
S C+++ L ++ Y + + + V LI+M KCG + +F+ + RDL
Sbjct: 312 SACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDL 371
Query: 489 ISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQ 548
+S+ S++ G +HG G A+ F++M+ G+ PD V F L C + LV G F
Sbjct: 372 VSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFEL 431
Query: 549 MVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTK 608
M +++ I + +HY+C+V+LL R G L+EA +++++MP E + WG+LL C H +T+
Sbjct: 432 MRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWGSLLGGCSLHGNTE 491
Query: 609 IVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWI 665
I E A + L Q GS++LLSNIYAA RW D A +R + G+ K G+SWI
Sbjct: 492 IAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 179/430 (41%), Gaps = 56/430 (13%)
Query: 112 LWNSIIRANVSHGYFEFAIEIYVGMRKFGFF-PDGFTLPLIIEACSHLGSSSLCRIVHCH 170
LWN +I+ + F + I + M + G PD +T PL+++ CS+ G + VH
Sbjct: 76 LWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGL 135
Query: 171 ALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGA 230
L +GF + V V YGK + A ++F MP R +SW +V Y + + A
Sbjct: 136 VLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEA 195
Query: 231 SRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISV 290
+F M N +W +L+ + G +LF M R IS ++ +
Sbjct: 196 KSMFDLMP----ERNLGSWNALVDGLVKSGDLVNAKKLFDEMPKRDI-ISYTSMIDGYAK 250
Query: 291 CADVVEV-DRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLES 349
D+V D E G ++ +ALI Y ++ +A VF ++ KN++
Sbjct: 251 GGDMVSARDLFEEARGVDVRAW--------SALILGYAQNGQPNEAFKVFSEMCAKNVKP 302
Query: 350 WN----ALISSYAESG---LCEEAHAVLLQLEKSLDGH---------------------- 380
L+S+ ++ G LCE+ + L Q H
Sbjct: 303 DEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMDRAAKL 362
Query: 381 ---QPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAA 437
P R +++S+ +++ G A GCG E++ LF +M + P+ V F+ +L VC +
Sbjct: 363 FEEMPQR-DLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQSRL 421
Query: 438 LNLGRELHGYAVRNLMDDNILVG----NGLINMYMKCGDFKKGHLVFDNIEGRDLIS-WN 492
+ G + +IL + ++N+ + G K+ + + ++ S W
Sbjct: 422 VEEGLRYFELMRKKY---SILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAWG 478
Query: 493 SLISGYGMHG 502
SL+ G +HG
Sbjct: 479 SLLGGCSLHG 488
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 6/196 (3%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGF 141
+I YA+ G + A+ +F R + W+++I +G A +++ M
Sbjct: 244 MIDGYAKGGDMVSARDLFEEA---RGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAKNV 300
Query: 142 FPDGFTLPLIIEACSHLGSSSLCRIV--HCHALELGFRNHLHVVNKLVGMYGKLGRMEDA 199
PD F + ++ ACS +G LC V + H F +H +VV L+ M K G M+ A
Sbjct: 301 KPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSH-YVVPALIDMNAKCGHMDRA 359
Query: 200 CQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRC 259
+LF+ MP R ++S+ +M+ G A + A R+F++M E P+ V +T +L +
Sbjct: 360 AKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCGQS 419
Query: 260 GLYDETLELFKLMRTR 275
L +E L F+LMR +
Sbjct: 420 RLVEEGLRYFELMRKK 435
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 235 bits (599), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 167/623 (26%), Positives = 283/623 (45%), Gaps = 84/623 (13%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
I L+ C + ++H + T + F +KL+A ++ + +A +F V
Sbjct: 31 LINDLRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLLA-FSSVLDIRYASSIFEHVSNTN 89
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRI 166
L ++N++IR E A ++ +R G D F+ +++CS S+
Sbjct: 90 L---FMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEG 146
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHD 226
+H AL GF + N L+ Y G++ DA ++FD MP
Sbjct: 147 LHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSV---------------- 190
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
++VT+++L++ + + L+LF++MR ++ L
Sbjct: 191 ------------------DAVTFSTLMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLS 232
Query: 287 VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKN 346
+S +D+ ++ + H IK G + L + ALI Y K + A +F
Sbjct: 233 FLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYGKTGGISSARRIF------- 285
Query: 347 LESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEES 406
+R +V++W+ +I +A G EE
Sbjct: 286 ---------------------------------DCAIRKDVVTWNCMIDQYAKTGLLEEC 312
Query: 407 LELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINM 466
+ L R+M+ K+KPN TF +LS CA A +GR + + + ++G L++M
Sbjct: 313 VWLLRQMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDM 372
Query: 467 YMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMK--PDHV 524
Y K G +K +F+ ++ +D+ SW ++ISGYG HGL A+T F++M + K P+ +
Sbjct: 373 YAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEI 432
Query: 525 TFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRN 584
TF+ L+ACSH GLV G F +MV + P VEHY C+VDLLGRAG L+EA +++RN
Sbjct: 433 TFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRN 492
Query: 585 MPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDS 644
+PI + W ALL +CR + + + E ++ + +LL+ +A G E S
Sbjct: 493 LPITSDSTAWRALLAACRVYGNADLGESVMMRLAEMGETHPADAILLAGTHAVAGNPEKS 552
Query: 645 ARVRISAKKKGLKKTPGQSWIEV 667
++ KG +K G S IE+
Sbjct: 553 LDNELN---KG-RKEAGYSAIEI 571
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 80/187 (42%), Gaps = 15/187 (8%)
Query: 418 VKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGH 477
+ P C L C + ++ +HGY V+ +D + + L+ + D +
Sbjct: 24 LSPQCQKLINDLRSCRDTVEVS---RIHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYAS 79
Query: 478 LVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAG 537
+F+++ +L +N++I GY + + A + F+++ G+ D +F+T L +CS
Sbjct: 80 SIFEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSREL 139
Query: 538 LVAAGRNLFYQMVRE-----FRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEY 592
V+ G L +R + + H+ C+ G + +A + MP +
Sbjct: 140 CVSIGEGLHGIALRSGFMVFTDLRNALIHFYCV------CGKISDARKVFDEMPQSVDAV 193
Query: 593 IWGALLN 599
+ L+N
Sbjct: 194 TFSTLMN 200
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 230 bits (587), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 138/477 (28%), Positives = 240/477 (50%), Gaps = 54/477 (11%)
Query: 230 ASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA---LAV 286
AS IF +E+ PNS + +++ R L F LM E A +
Sbjct: 66 ASSIFDSIEI----PNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHF 121
Query: 287 VISVCADVVEVDRSREIHGYVIKGG-YEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK 345
+I C ++IH +V+K G + V+ ++ Y + K L DA VF +I
Sbjct: 122 LIVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIP-- 179
Query: 346 NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEE 405
+P+V+ W +++G+ G G E
Sbjct: 180 --------------------------------------QPDVVKWDVLMNGYVRCGLGSE 201
Query: 406 SLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVR-NLMDDNILVGNGLI 464
LE+FR M + ++P+ + +T L+ CA++ AL G+ +H + + + ++ ++ VG L+
Sbjct: 202 GLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALV 261
Query: 465 NMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKA-GMKPDH 523
+MY KCG + VF + R++ SW +LI GY +G A+T + + + G+KPD
Sbjct: 262 DMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLEREDGIKPDS 321
Query: 524 VTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVR 583
V + L+AC+H G + GR++ M + I P EHY+C+VDL+ RAG L +A +++
Sbjct: 322 VVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCRAGRLDDALNLIE 381
Query: 584 NMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNS----QITGSFMLLSNIYAANG 639
MP++P +WGALLN CRTHK+ ++ E +L L + + + LSNIY +
Sbjct: 382 KMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEEAALVQLSNIYFSVQ 441
Query: 640 RWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELAL 696
R ++++VR +++G++KTPG S +EV V F +G++ H L +++ ++ L++
Sbjct: 442 RNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNLLQIHTVIHLLSV 498
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 168/375 (44%), Gaps = 57/375 (15%)
Query: 52 QQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVS----HAQKVFNAVPFERL 107
Q+C+T++Q + HS I+ +R + +KL+ + +++ +A +F+++
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSI----- 73
Query: 108 DHIP---LWNSIIRANVSHGYFEFAIEIYVGMRKF---GFFPDGFTLPLIIEACSHLGSS 161
IP +++++IR + ++ M K P T +I AC
Sbjct: 74 -EIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKACFF 132
Query: 162 SLCRIVHCHALELG-FRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSG 220
S+ + +HC ++ G F + HV ++ +Y + + DA ++FD +P
Sbjct: 133 SVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIP------------- 179
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEIS 280
+P+ V W L++ + RCGL E LE+F+ M +G E
Sbjct: 180 ----------------------QPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPD 217
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGY-EDYLFVKNALIDTYRKHKHLGDAHNVF 339
++ ++ CA V + + + IH +V K + E +FV AL+D Y K + A VF
Sbjct: 218 EFSVTTALTACAQVGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVF 277
Query: 340 FDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFAS 399
+ +N+ SW ALI YA G ++A L +LE+ DG ++P+ + V++ A
Sbjct: 278 KKLTRRNVFSWAALIGGYAAYGYAKKAMTCLERLERE-DG---IKPDSVVLLGVLAACAH 333
Query: 400 KGCGEESLELFRRMQ 414
G EE + M+
Sbjct: 334 GGFLEEGRSMLENME 348
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 229 bits (583), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 139/481 (28%), Positives = 240/481 (49%), Gaps = 54/481 (11%)
Query: 230 ASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLM-RTRGCEISAEALAV-- 286
AS IF +E+ PNS + +++ R L F LM + +I+ L
Sbjct: 66 ASSIFDSIEI----PNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHF 121
Query: 287 VISVCADVVEVDRSREIHGYVIKGG-YEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK 345
+I C ++IH +V+K G + V+ ++ Y + K L DA VF +I
Sbjct: 122 LIVACLKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIP-- 179
Query: 346 NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEE 405
+P+V+ W +++G+ G G E
Sbjct: 180 --------------------------------------QPDVVKWDVLMNGYVRCGLGSE 201
Query: 406 SLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRN-LMDDNILVGNGLI 464
LE+F+ M + ++P+ + +T L+ CA++ AL G+ +H + + ++ ++ VG L+
Sbjct: 202 GLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALV 261
Query: 465 NMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKA-GMKPDH 523
+MY KCG + VF+ + R++ SW +LI GY +G A T D + + G+KPD
Sbjct: 262 DMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDS 321
Query: 524 VTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVR 583
V + L+AC+H G + GR + M + I P EHY+C+VDL+ RAG L +A D++
Sbjct: 322 VVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDLIE 381
Query: 584 NMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNS----QITGSFMLLSNIYAANG 639
MP++P +WGALLN CRTHK+ ++ E +L L + + + LSNIY +
Sbjct: 382 KMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEAALVQLSNIYFSVQ 441
Query: 640 RWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMA 699
R ++ +VR +++G++KTPG S +EV V F +G++ H L +++ ++ L++ +
Sbjct: 442 RNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNLLQIHTLIHLLSVDAS 501
Query: 700 N 700
Sbjct: 502 Q 502
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 168/375 (44%), Gaps = 57/375 (15%)
Query: 52 QQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVS----HAQKVFNAVPFERL 107
Q+C+T++Q + HS I+ +R + +KL+ + +++ +A +F+++
Sbjct: 19 QRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIFDSI----- 73
Query: 108 DHIP---LWNSIIRANVSHGYFEFAIEIYVGMRK---FGFFPDGFTLPLIIEACSHLGSS 161
IP +++++IR + ++ M K P T +I AC
Sbjct: 74 -EIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFF 132
Query: 162 SLCRIVHCHALELG-FRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSG 220
S+ + +HC ++ G F + HV ++ +Y + + DA ++FD +P ++ W+ +++G
Sbjct: 133 SVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDVLMNG 192
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEIS 280
Y RCGL E LE+FK M RG E
Sbjct: 193 YV-----------------------------------RCGLGSEGLEVFKEMLVRGIEPD 217
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGY-EDYLFVKNALIDTYRKHKHLGDAHNVF 339
++ ++ CA V + + + IH +V K + E +FV AL+D Y K + A VF
Sbjct: 218 EFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVF 277
Query: 340 FDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFAS 399
+ +N+ SW ALI YA G ++A L ++E+ DG ++P+ + V++ A
Sbjct: 278 EKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIERE-DG---IKPDSVVLLGVLAACAH 333
Query: 400 KGCGEESLELFRRMQ 414
G EE + M+
Sbjct: 334 GGFLEEGRTMLENME 348
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 147/350 (42%), Gaps = 15/350 (4%)
Query: 10 LCSSSLRFRPHFLTRSFSLXXXXXXXXXXXXXXXEDFFITLLQQCSTLQQARQLHSQTIL 69
+CS S +PH R F L F I + +Q+H +
Sbjct: 87 ICSRS--SQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKACFFSVGKQIHCWVVK 144
Query: 70 TAAY-RKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEF 128
+ + ++ +Y + A+KVF+ +P + W+ ++ V G
Sbjct: 145 NGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIP---QPDVVKWDVLMNGYVRCGLGSE 201
Query: 129 AIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGF-RNHLHVVNKLV 187
+E++ M G PD F++ + AC+ +G+ + + +H + + + + V LV
Sbjct: 202 GLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKRWIESDVFVGTALV 261
Query: 188 GMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDW-RPNS 246
MY K G +E A ++F+ + R + SW ++ GYA A+ R+E ED +P+S
Sbjct: 262 DMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLDRIEREDGIKPDS 321
Query: 247 VTWTSLLSSHKRCGLYDETLELFKLMRTR-GCEISAEALAVVISVCADVVEVDRSREIHG 305
V +L++ G +E + + M R G E + ++ + +D + ++
Sbjct: 322 VVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCRAGRLDDALDL-- 379
Query: 306 YVIKGGYEDYLFVKNALIDTYRKHKH--LGD-AHNVFFDIKNKNLESWNA 352
+ K + V AL++ R HK+ LG+ A D++ N+E A
Sbjct: 380 -IEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEEA 428
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 226 bits (577), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 167/624 (26%), Positives = 288/624 (46%), Gaps = 83/624 (13%)
Query: 49 TLLQQCSTLQQ----ARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPF 104
++++ C+ Q+ QLH + A ++ LI++YA+F +KVF+ +
Sbjct: 51 SVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLH 110
Query: 105 ERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLC 164
D + + SII + G A+++ M +GF P + ++ C+ +GSSS
Sbjct: 111 R--DTVS-YCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSS-- 165
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
K+ RM A L D ++L +V Y
Sbjct: 166 ---------------------------KVARMFHALVLVDERMQESVLLSTALVDMYLKF 198
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
D A +F +ME++ N V+WT+++S Y+ ++LF+ M+ + L
Sbjct: 199 DDHAAAFHVFDQMEVK----NEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVTL 254
Query: 285 AVVISVCADV-VEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
V+ C ++ +EIHG+ + G
Sbjct: 255 LSVLPACVELNYGSSLVKEIHGFSFRHGCH-----------------------------A 285
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
++ L + A ++ Y G + VL + K D V+ WS++ISG+A G
Sbjct: 286 DERLTA--AFMTMYCRCGNVSLSR-VLFETSKVRD--------VVMWSSMISGYAETGDC 334
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
E + L +M+ ++ N VT ++S C L+ +H ++ +IL+GN L
Sbjct: 335 SEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCGFMSHILLGNAL 394
Query: 464 INMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDH 523
I+MY KCG VF + +DL+SW+S+I+ YG+HG G AL F MIK G + D
Sbjct: 395 IDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFKGMIKGGHEVDD 454
Query: 524 VTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVR 583
+ F+ LSAC+HAGLV + +F Q ++ + T+EHYAC ++LLGR G + +A ++
Sbjct: 455 MAFLAILSACNHAGLVEEAQTIFTQ-AGKYHMPVTLEHYACYINLLGRFGKIDDAFEVTI 513
Query: 584 NMPIEPNEYIWGALLNSCRTHKDTKIVEE-TASQILTLNSQITGSFMLLSNIYAANGRWE 642
NMP++P+ IW +LL++C TH + + A++++ +++LLS I+ +G +
Sbjct: 514 NMPMKPSARIWSSLLSACETHGRLDVAGKIIANELMKSEPDNPANYVLLSKIHTESGNYH 573
Query: 643 DSARVRISAKKKGLKKTPGQSWIE 666
+ VR +++ L K G S IE
Sbjct: 574 AAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 102/220 (46%), Gaps = 6/220 (2%)
Query: 394 ISGFASKGCGEESLELFRRMQLAKVKPNCVT--FSTVLSVCA-ELAALNLGRELHGYAVR 450
+ G S +E+L L++ +++ + N T +V+ CA + LG +LH ++
Sbjct: 17 LKGLVSDQFYDEALRLYK-LKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLK 75
Query: 451 NLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTT 510
D + +V N LI+MY K VFD + RD +S+ S+I+ GL A+
Sbjct: 76 AGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKL 135
Query: 511 FDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVR-EFRIEPTVEHYACLVDLL 569
EM G P + L+ C+ G + +F+ +V + R++ +V LVD+
Sbjct: 136 IKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMY 195
Query: 570 GRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKI 609
+ A + M ++ NE W A+++ C +++ ++
Sbjct: 196 LKFDDHAAAFHVFDQMEVK-NEVSWTAMISGCVANQNYEM 234
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 125/362 (34%), Positives = 196/362 (54%), Gaps = 14/362 (3%)
Query: 309 KGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHA 368
K G+E +++V+ AL+ Y ++ DAH VF ++ +N +WN +I+ G E+A
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKA-- 208
Query: 369 VLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM-QLAKVKPNCVTFST 427
L LEK P R V+SW+ +I G+A +E++ LF RM +KPN +T
Sbjct: 209 -LCFLEK-----MPNR-TVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILA 261
Query: 428 VLSVCAELAALNLGRELHGY-AVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEG- 485
+L L L + +H Y R + +I V N LI+ Y KCG + F I
Sbjct: 262 ILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNG 321
Query: 486 -RDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAG-R 543
++L+SW ++IS + +HG+G A++ F +M + G+KP+ VT ++ L+ACSH GL
Sbjct: 322 RKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFL 381
Query: 544 NLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRT 603
F MV E++I P V+HY CLVD+L R G L+EA I +PIE +W LL +C
Sbjct: 382 EFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSV 441
Query: 604 HKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQS 663
+ D ++ E +++ L G ++L+SNI+ GR+ D+ R R +G+ K PG S
Sbjct: 442 YDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHS 501
Query: 664 WI 665
+
Sbjct: 502 QV 503
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 144/288 (50%), Gaps = 21/288 (7%)
Query: 144 DGFTLPLIIEACSH--LGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQ 201
D FT +++A S+ S L +H L+LGF +H++V LVGMY G M DA +
Sbjct: 120 DSFTYLFLLKASSNPRFPSLLLGIGLHGLTLKLGFESHVYVQTALVGMYLVGGNMIDAHK 179
Query: 202 LFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNS--VTWTSLLSSHKRC 259
+FD MP R ++WN M++G D A ++M PN V+WT+++ + R
Sbjct: 180 VFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKM------PNRTVVSWTTIIDGYARV 233
Query: 260 GLYDETLELF-KLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDY-LF 317
E + LF +++ + + + ++ ++ ++ +H YV K G+ +
Sbjct: 234 DKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIR 293
Query: 318 VKNALIDTYRKHKHLGDAHNVFFDIKN--KNLESWNALISSYAESGLCEEAHAVLLQLEK 375
V N+LID Y K + A F +I N KNL SW +IS++A G+ +EA ++ +E+
Sbjct: 294 VTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMER 353
Query: 376 SLDGHQPLRPNVISWSAVISGFASKGCGEES-LELFRRM-QLAKVKPN 421
L+PN ++ +V++ + G EE LE F M K+ P+
Sbjct: 354 -----LGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPD 396
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/351 (24%), Positives = 140/351 (39%), Gaps = 77/351 (21%)
Query: 77 FLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFA------- 129
++ L+ +Y G++ A KVF+ +P ER + WN +I + G FE A
Sbjct: 159 YVQTALVGMYLVGGNMIDAHKVFDEMP-ER--NPVTWNVMITGLTNLGDFEKALCFLEKM 215
Query: 130 -----------IEIYVGMRKF--------------GFFPDGFTLPLIIEACSHLGSSSLC 164
I+ Y + K P+ T+ I+ A +LG +C
Sbjct: 216 PNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMC 275
Query: 165 RIVHCHALELGFRN-HLHVVNKLVGMYGKLGRMEDACQLFDGMP--VRTILSWNTMVSGY 221
VH + + GF + V N L+ Y K G ++ A + F +P + ++SW TM+S +
Sbjct: 276 GSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAF 335
Query: 222 AFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDET-LELFKLMRTRGCEIS 280
A + A +FK ME +PN VT S+L++ GL +E LE F M
Sbjct: 336 AIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTM-------- 387
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFF 340
++ Y I + Y L+D R+ L +A +
Sbjct: 388 ----------------------VNEYKITPDVKHY----GCLVDMLRRKGRLEEAEKIAL 421
Query: 341 DIK-NKNLESWNALI---SSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNV 387
+I + W L+ S Y ++ L E L++LE+S G L N+
Sbjct: 422 EIPIEEKAVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNI 472
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 226 bits (576), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 148/483 (30%), Positives = 228/483 (47%), Gaps = 80/483 (16%)
Query: 176 FRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFK 235
RN+L + +KLV +Y G E A ++FD
Sbjct: 123 LRNNLGISSKLVRLYASCGYAEVAHEVFD------------------------------- 151
Query: 236 RMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVV 295
RM D P W SL+S + G Y++ + L+ M G + V+ C +
Sbjct: 152 RMSKRDSSP--FAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIG 209
Query: 296 EVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALIS 355
V IH ++K G+ ++V NAL+ Y K + A NVF I +K+
Sbjct: 210 SVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDY-------- 261
Query: 356 SYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQL 415
+SW+++++G+ G E+L++FR M
Sbjct: 262 --------------------------------VSWNSMLTGYLHHGLLHEALDIFRLMVQ 289
Query: 416 AKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKK 475
++P+ V S+VL A + + GR+LHG+ +R M+ + V N LI +Y K G +
Sbjct: 290 NGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQ 346
Query: 476 GHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSH 535
+FD + RD +SWN++IS H N L F++M +A KPD +TFV+ LS C++
Sbjct: 347 ACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRANAKPDGITFVSVLSLCAN 403
Query: 536 AGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAND-IVRNMPIEPNEYIW 594
G+V G LF M +E+ I+P +EHYAC+V+L GRAG+++EA IV+ M +E +W
Sbjct: 404 TGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVW 463
Query: 595 GALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKK 654
GALL +C H +T I E A ++ L +F LL IY+ R ED RVR +
Sbjct: 464 GALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSKAKRAEDVERVRQMMVDR 523
Query: 655 GLK 657
GL+
Sbjct: 524 GLE 526
Score = 149 bits (375), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 121/468 (25%), Positives = 203/468 (43%), Gaps = 90/468 (19%)
Query: 45 DFFITLLQQCSTLQ---QARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNA 101
+ F +LL+ C +L+ ++H +++KL+ LYA G A +VF+
Sbjct: 93 EIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDR 152
Query: 102 VPFERLDHIPL-WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGS 160
+ + D P WNS+I G +E A+ +Y M + G PD FT P +++AC +GS
Sbjct: 153 M--SKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGS 210
Query: 161 SSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSG 220
+ +H ++ GF ++V+N LV MY K G + A +FD +P + +SWN+M++G
Sbjct: 211 VQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTG 270
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEIS 280
Y + GL E L++F+LM G E
Sbjct: 271 YLHH-----------------------------------GLLHEALDIFRLMVQNGIEPD 295
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFF 340
A++ SV A V+ R++HG+VI+ G E L V NALI Y K LG A +F
Sbjct: 296 KVAIS---SVLARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFD 352
Query: 341 DIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASK 400
+ ++ SWNA+IS+++++
Sbjct: 353 QMLERDTVSWNAIISAHSKNS--------------------------------------- 373
Query: 401 GCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNL-MDDNILV 459
L+ F +M A KP+ +TF +VLS+CA + G L + +D +
Sbjct: 374 ----NGLKYFEQMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEH 429
Query: 460 GNGLINMYMKCGDFKKGHLVFDNIEGRDL--ISWNSLISGYGMHGLGD 505
++N+Y + G ++ + + G + W +L+ +HG D
Sbjct: 430 YACMVNLYGRAGMMEEAYSMIVQEMGLEAGPTVWGALLYACYLHGNTD 477
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 8/184 (4%)
Query: 425 FSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIE 484
F+++L C L A++ G +H L+ +N+ + + L+ +Y CG + H VFD +
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 485 GRD--LISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAG 542
RD +WNSLISGY G ++A+ + +M + G+KPD TF L AC G V G
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 543 RNLFYQMVRE-FRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYI-WGALLNS 600
+ +V+E F + V LV + + G + +A ++ +P +Y+ W ++L
Sbjct: 215 EAIHRDLVKEGFGYDVYV--LNALVVMYAKCGDIVKARNVFDMIP--HKDYVSWNSMLTG 270
Query: 601 CRTH 604
H
Sbjct: 271 YLHH 274
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 223 bits (567), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 164/607 (27%), Positives = 275/607 (45%), Gaps = 114/607 (18%)
Query: 47 FITLLQQC---STLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F LL+ C +L +Q+H + FL KL+ +Y GSV AQKVF+
Sbjct: 114 FSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDE-- 171
Query: 104 FERLDHIPLWNSIIRANVSHG--YFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSS 161
++ WN+++R V G ++ + + MR+ G + ++L + + S G+S
Sbjct: 172 -STSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFK--SFAGAS 228
Query: 162 SLCRIVHCHALEL--GFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVS 219
+L + + HAL + G N + + LV MY K G++ A ++FD + R I+ W M++
Sbjct: 229 ALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIA 288
Query: 220 GYAFNHDCVGASRIFKRM-ELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCE 278
G A N A +F+ M E PNSV T++L
Sbjct: 289 GLAHNKRQWEALGLFRTMISEEKIYPNSVILTTIL------------------------- 323
Query: 279 ISAEALAVVISVCADVVEVDRSREIHGYVIKG-GYEDYLFVKNALIDTYRKHKHLGDAHN 337
V DV + +E+H +V+K Y + FV + LID Y K +
Sbjct: 324 ----------PVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRR 373
Query: 338 VFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQP--------------L 383
VF+ K +N SW AL+S YA +G ++A ++ +++ +G +P L
Sbjct: 374 VFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQ--EGFRPDVVTIATVLPVCAEL 431
Query: 384 R------------------PNVISWSAVISGFASKGCGEESLELFRRMQ----------- 414
R PNV ++++ ++ G E + LF R++
Sbjct: 432 RAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMI 491
Query: 415 --------------------LAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMD 454
L+K +P+ VT VL+VC++L AL LG+ELHG+ ++ +
Sbjct: 492 DCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKEFE 551
Query: 455 DNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEM 514
V +I MY KCGD + + FD + + ++W ++I YG + L +A+ F++M
Sbjct: 552 SIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFEQM 611
Query: 515 IKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGL 574
+ G P+ TF LS CS AG V F M+R + ++P+ EHY+ +++LL R G
Sbjct: 612 VSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRCGR 671
Query: 575 LQEANDI 581
++EA +
Sbjct: 672 VEEAQRL 678
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 182/422 (43%), Gaps = 75/422 (17%)
Query: 126 FEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNK 185
E A+ I + + G + T ++EAC S + VH H G ++ + K
Sbjct: 92 LEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTK 151
Query: 186 LVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPN 245
LV MY G ++DA ++FD + SWN ++ G
Sbjct: 152 LVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRG------------------------- 186
Query: 246 SVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHG 305
+++S KR Y + L F MR G +++ +L+ V A + + + H
Sbjct: 187 -----TVISGKKR---YQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHA 238
Query: 306 YVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEE 365
IK G + +F+K +L+D Y K +G A VF +I ++
Sbjct: 239 LAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERD------------------- 279
Query: 366 AHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM-QLAKVKPNCVT 424
++ W A+I+G A E+L LFR M K+ PN V
Sbjct: 280 ---------------------IVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVI 318
Query: 425 FSTVLSVCAELAALNLGRELHGYAVRNL-MDDNILVGNGLINMYMKCGDFKKGHLVFDNI 483
+T+L V ++ AL LG+E+H + +++ + V +GLI++Y KCGD G VF
Sbjct: 319 LTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGS 378
Query: 484 EGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGR 543
+ R+ ISW +L+SGY +G D AL + M + G +PD VT T L C+ + G+
Sbjct: 379 KQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGK 438
Query: 544 NL 545
+
Sbjct: 439 EI 440
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 10/210 (4%)
Query: 394 ISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLM 453
I FA + E +L + ++ + N TFS +L C +L G+++H + N +
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 454 DDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLG--DNALTTF 511
+ N + L++MY CG K VFD ++ SWN+L+ G + G + L+TF
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 512 DEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLL-- 569
EM + G+ + + + + A + G ++ +V LVD+
Sbjct: 203 TEMRELGVDLNVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFN-SVFLKTSLVDMYFK 261
Query: 570 -GRAGLLQEANDIVRNMPIEPNEYIWGALL 598
G+ GL + D + +E + +WGA++
Sbjct: 262 CGKVGLARRVFDEI----VERDIVVWGAMI 287
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 222 bits (566), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 149/536 (27%), Positives = 253/536 (47%), Gaps = 84/536 (15%)
Query: 165 RIVHCHALELGFRNHLHVVNKL-----VGMYGKLGRMEDACQLFDGMPVRTILSWNTMVS 219
R +H H + G ++H + N L V + G L + FD P + WN ++
Sbjct: 22 RKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHFDSDPSTS--DWNYLIR 79
Query: 220 GYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEI 279
G++ + + + + RM LLSS R L+ L
Sbjct: 80 GFSNSSSPLNSILFYNRM--------------LLSSVSRPDLFTFNFAL----------- 114
Query: 280 SAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVF 339
C + + + EIHG VI+ G F+ +A++ T
Sbjct: 115 ---------KSCERIKSIPKCLEIHGSVIRSG-----FLDDAIVAT-------------- 146
Query: 340 FDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFAS 399
+L+ Y+ +G E A V ++ P+R +++SW+ +I F+
Sbjct: 147 ------------SLVRCYSANGSVEIASKVFDEM--------PVR-DLVSWNVMICCFSH 185
Query: 400 KGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILV 459
G ++L +++RM V + T +LS CA ++ALN+G LH A + + V
Sbjct: 186 VGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFV 245
Query: 460 GNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGM 519
N LI+MY KCG + VF+ + RD+++WNS+I GYG+HG G A++ F +M+ +G+
Sbjct: 246 SNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGV 305
Query: 520 KPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAN 579
+P+ +TF+ L CSH GLV G F M +F + P V+HY C+VDL GRAG L+ +
Sbjct: 306 RPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSL 365
Query: 580 DIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANG 639
+++ + +W LL SC+ H++ ++ E +++ L + G ++L+++IY+A
Sbjct: 366 EMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAAN 425
Query: 640 RWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELA 695
+ A +R + L+ PG SWIE+ +V+ F + +H E VI EL
Sbjct: 426 DAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMH---PESAVIYSELG 478
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/371 (26%), Positives = 164/371 (44%), Gaps = 45/371 (12%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYAR--FGSVSHAQKVFNAVPF 104
+ +LQ C+++++ R++HS I+ P + L+ A GS+SHAQ +F+ F
Sbjct: 8 IVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFD--HF 65
Query: 105 ERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFF-PDGFTLPLIIEACSHLGSSSL 163
+ WN +IR + +I Y M PD FT +++C + S
Sbjct: 66 DSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPK 125
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAF 223
C +H + GF + V LV Y G +E A ++FD MPVR ++SWN M+ F
Sbjct: 126 CLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMIC--CF 183
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
+H GL+++ L ++K M G +
Sbjct: 184 SH---------------------------------VGLHNQALSMYKRMGNEGVCGDSYT 210
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
L ++S CA V ++ +H E +FV NALID Y K L +A VF ++
Sbjct: 211 LVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMR 270
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
+++ +WN++I Y G EA + ++ S +RPN I++ ++ G + +G
Sbjct: 271 KRDVLTWNSMIIGYGVHGHGVEAISFFRKMVAS-----GVRPNAITFLGLLLGCSHQGLV 325
Query: 404 EESLELFRRMQ 414
+E +E F M
Sbjct: 326 KEGVEHFEIMS 336
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 118/231 (51%), Gaps = 3/231 (1%)
Query: 45 DFFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPF 104
+F + ++ ++ + ++H I + +A L+ Y+ GSV A KVF+ +P
Sbjct: 111 NFALKSCERIKSIPKCLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPV 170
Query: 105 ERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLC 164
L WN +I G A+ +Y M G D +TL ++ +C+H+ + ++
Sbjct: 171 RDL---VSWNVMICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMG 227
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
++H A ++ + + V N L+ MY K G +E+A +F+GM R +L+WN+M+ GY +
Sbjct: 228 VMLHRIACDIRCESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVH 287
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTR 275
V A F++M RPN++T+ LL GL E +E F++M ++
Sbjct: 288 GHGVEAISFFRKMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQ 338
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 222 bits (566), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 152/555 (27%), Positives = 263/555 (47%), Gaps = 62/555 (11%)
Query: 50 LLQQCSTLQQARQLHSQTIL-TAAYRKPFLAAKLIALYARFGSVSHAQK-VFNAVPFERL 107
+ Q T Q Q+H+Q I+ + R+ + A+++I+ R + S+ + +F++V F
Sbjct: 12 IASQALTFPQLNQIHAQLIVFNSLPRQSYWASRIISCCTRLRAPSYYTRLIFDSVTFP-- 69
Query: 108 DHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIV 167
++ + NS+ + + +Y + G PD F+ P++I++ G +
Sbjct: 70 -NVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGI-----LF 123
Query: 168 HCHALELGFRNHLHVVNKLVGMY-------------------------------GKLGRM 196
+LGF +V N ++ MY K G
Sbjct: 124 QALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNK 183
Query: 197 EDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSH 256
E+AC+LFD MP ++SW M++G+A D A + F RM + V+W ++LS +
Sbjct: 184 EEACKLFDMMPENDVVSWTVMITGFAKVKDLENARKYFDRMP----EKSVVSWNAMLSGY 239
Query: 257 KRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYL 316
+ G ++ L LF M G + +VIS C+ + +R + + +
Sbjct: 240 AQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNC 299
Query: 317 FVKNALIDTYRKHKHLGDAHNVFFDI-KNKNLESWNALISSYAESGLCEEAHAVLLQLEK 375
FVK AL+D + K + + A +F ++ +NL +WNA+IS Y G A + + K
Sbjct: 300 FVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPK 359
Query: 376 SLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM-QLAKVKPNCVTFSTVLSVCAE 434
NV+SW+++I+G+A G ++E F M KP+ VT +VLS C
Sbjct: 360 R---------NVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGH 410
Query: 435 LAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSL 494
+A L LG + Y +N + N LI MY + G+ + VFD ++ RD++S+N+L
Sbjct: 411 MADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTL 470
Query: 495 ISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFR 554
+ + +G G L +M G++PD VT+ + L+AC+ AGL+ G+ +F + +R
Sbjct: 471 FTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIF-KSIR--- 526
Query: 555 IEPTVEHYACLVDLL 569
P +HYAC+ DLL
Sbjct: 527 -NPLADHYACM-DLL 539
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 93/231 (40%), Gaps = 19/231 (8%)
Query: 385 PNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGREL 444
PNV +++ F+ + L L+ + + P+ +F V+ L
Sbjct: 69 PNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGIL-----F 123
Query: 445 HGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLG 504
+ + V N +++MY+K + VFD I R WN +ISGY G
Sbjct: 124 QALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYWKWGNK 183
Query: 505 DNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYAC 564
+ A FD M + D V++ ++ + + R F +M E +V +
Sbjct: 184 EEACKLFDMMPEN----DVVSWTVMITGFAKVKDLENARKYFDRMP-----EKSVVSWNA 234
Query: 565 LVDLLGRAGLLQEA----NDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVE 611
++ + G ++A ND++R + + PNE W ++++C D +
Sbjct: 235 MLSGYAQNGFTEDALRLFNDMLR-LGVRPNETTWVIVISACSFRADPSLTR 284
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 222 bits (565), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 136/484 (28%), Positives = 234/484 (48%), Gaps = 78/484 (16%)
Query: 184 NKLVGMYGKLGRM-EDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDW 242
+KLV Y KL + + +F MP R I SWN ++ ++
Sbjct: 70 SKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFS-------------------- 109
Query: 243 RPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAE-ALAVVISVCADVVEVDRSR 301
R G ++++LF M C + L +++ C+ E
Sbjct: 110 ---------------RSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGD 154
Query: 302 EIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESG 361
IH +K G+ LFV +AL+ Y L A +F D+
Sbjct: 155 LIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDM------------------- 195
Query: 362 LCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPN 421
P+R +V+ ++A+ G+ +G L +FR M + +
Sbjct: 196 --------------------PVRDSVL-YTAMFGGYVQQGEAMLGLAMFREMGYSGFALD 234
Query: 422 CVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFD 481
V ++L C +L AL G+ +HG+ +R + +GN + +MY+KC H VF
Sbjct: 235 SVVMVSLLMACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFV 294
Query: 482 NIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAA 541
N+ RD+ISW+SLI GYG+ G + FDEM+K G++P+ VTF+ LSAC+H GLV
Sbjct: 295 NMSRRDVISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEK 354
Query: 542 GRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSC 601
L++++++E+ I P ++HYA + D + RAGLL+EA + +MP++P+E + GA+L+ C
Sbjct: 355 SW-LYFRLMQEYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGC 413
Query: 602 RTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPG 661
+ + + ++ E A +++ L + ++ L+ +Y+A GR++++ +R K+K + K PG
Sbjct: 414 KVYGNVEVGERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPG 473
Query: 662 QSWI 665
S I
Sbjct: 474 CSSI 477
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 173/386 (44%), Gaps = 46/386 (11%)
Query: 45 DFFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSV-SHAQKVFNAVP 103
D F +LL + R LH+ + T Y L++KL+ Y++ + + VF +P
Sbjct: 36 DLF-SLLHHSPNAKHLRHLHAHLLRTFLYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMP 94
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGM-RKFGFFPDGFTLPLIIEACSHLGSSS 162
+ +I WN II G+ +I++++ M R+ PD FTLPLI+ ACS +
Sbjct: 95 YR---NIFSWNIIIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAK 151
Query: 163 LCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYA 222
++H L+LGF + L V + LV MY +G++ A +LFD MPVR + + M GY
Sbjct: 152 SGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYV 211
Query: 223 FNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAE 282
+ + +F+ M + +SV SLL +
Sbjct: 212 QQGEAMLGLAMFREMGYSGFALDSVVMVSLLMA--------------------------- 244
Query: 283 ALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDI 342
C + + + +HG+ I+ L + NA+ D Y K L AH VF ++
Sbjct: 245 --------CGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNM 296
Query: 343 KNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGC 402
+++ SW++LI Y G + + ++ K + + PN +++ V+S A G
Sbjct: 297 SRRDVISWSSLILGYGLDGDVVMSFKLFDEMLK-----EGIEPNAVTFLGVLSACAHGGL 351
Query: 403 GEESLELFRRMQLAKVKPNCVTFSTV 428
E+S FR MQ + P +++V
Sbjct: 352 VEKSWLYFRLMQEYNIVPELKHYASV 377
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 116/242 (47%), Gaps = 23/242 (9%)
Query: 44 EDFFITL-LQQCSTLQQARQ---LHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVF 99
+DF + L L+ CS ++A+ +H + F+++ L+ +Y G + HA+K+F
Sbjct: 133 DDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLHARKLF 192
Query: 100 NAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLG 159
+ +P D + L+ ++ V G + ++ M GF D + ++ AC LG
Sbjct: 193 DDMPVR--DSV-LYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLG 249
Query: 160 SSSLCRIVH--------CHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTI 211
+ + VH C L LG N + MY K ++ A +F M R +
Sbjct: 250 ALKHGKSVHGWCIRRCSCLGLNLG--------NAITDMYVKCSILDYAHTVFVNMSRRDV 301
Query: 212 LSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKL 271
+SW++++ GY + D V + ++F M E PN+VT+ +LS+ GL +++ F+L
Sbjct: 302 ISWSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRL 361
Query: 272 MR 273
M+
Sbjct: 362 MQ 363
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 218 bits (555), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/352 (34%), Positives = 187/352 (53%), Gaps = 16/352 (4%)
Query: 316 LFVKNALIDTYRKHKHLGDAHNV-FFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLE 374
LF + + +H AH + F + N + AL+ YA G EA ++ ++
Sbjct: 118 LFKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIR 177
Query: 375 KSLDGHQPLRPNVISWSAVISGFASK---GCGEESLELFRRMQLAKVKPNCVTFSTVLSV 431
+ P++ +W+ +++ +A+ EE L LF RMQ V+PN ++ ++
Sbjct: 178 E---------PDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQ---VRPNELSLVALIKS 225
Query: 432 CAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISW 491
CA L G H Y ++N + N VG LI++Y KCG VFD + RD+ +
Sbjct: 226 CANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCY 285
Query: 492 NSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVR 551
N++I G +HG G + + +I G+ PD TFV +SACSH+GLV G +F M
Sbjct: 286 NAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKA 345
Query: 552 EFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVE 611
+ IEP VEHY CLVDLLGR+G L+EA + ++ MP++PN +W + L S +TH D + E
Sbjct: 346 VYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGE 405
Query: 612 ETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQS 663
+L L + +G+++LLSNIYA RW D + R K + K+PG S
Sbjct: 406 IALKHLLGLEFENSGNYVLLSNIYAGVNRWTDVEKTRELMKDHRVNKSPGIS 457
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 191/452 (42%), Gaps = 65/452 (14%)
Query: 48 ITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERL 107
+ L+ +C +LQ +Q+H+Q I + +KL+ L + +S+A + +P
Sbjct: 13 LNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTV-CLSYALSILRQIPNPS- 70
Query: 108 DHIPLWNSIIRA-----NVSHGYFEFAIEIYVGMRKFGFF-PDGFTLPLIIEACSHLGS- 160
+ L+N++I + N + + F++ + + F P+ FT P + +A
Sbjct: 71 --VFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQW 128
Query: 161 SSLCRIVHCHALE-LGFRNHLHVVNK-LVGMYGKLGRMEDACQLFDGMPVRTILSWNTMV 218
R +H H L+ L NH V LVG Y G++ +A LF+
Sbjct: 129 HRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFE-------------- 174
Query: 219 SGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYD---ETLELFKLMRTR 275
RI + P+ TW +LL+++ D E L LF M+ R
Sbjct: 175 -------------RIRE--------PDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVR 213
Query: 276 GCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDA 335
E+S L +I CA++ E R H YV+K FV +LID Y K L A
Sbjct: 214 PNELS---LVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFA 270
Query: 336 HNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVIS 395
VF ++ +++ +NA+I A G +E ++L KSL Q L P+ ++ IS
Sbjct: 271 RKVFDEMSQRDVSCYNAMIRGLAVHGFGQEG----IELYKSLIS-QGLVPDSATFVVTIS 325
Query: 396 GFASKGCGEESLELFRRMQ-LAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNL-M 453
+ G +E L++F M+ + ++P + ++ + L E ++ + +
Sbjct: 326 ACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEE----CIKKMPV 381
Query: 454 DDNILVGNGLINMYMKCGDFKKGHLVFDNIEG 485
N + + GDF++G + ++ G
Sbjct: 382 KPNATLWRSFLGSSQTHGDFERGEIALKHLLG 413
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/386 (30%), Positives = 210/386 (54%), Gaps = 32/386 (8%)
Query: 320 NALID---TYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKS 376
AL+D +R+ D+ +V F IK + + ++L + + + ++Q++ S
Sbjct: 46 KALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTS 105
Query: 377 LDG----------------HQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKP 420
L G P + N++ W+A+IS + E++ELF+RM+ K++
Sbjct: 106 LVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELFKRMEAEKIEL 165
Query: 421 NCVTFSTVLSVCAELAALNLGRELHGYAV---RNLMDDNILVGNGLINMYMKCGDFKKGH 477
+ V + LS CA+L A+ +G E++ ++ R L D + + N L+NMY+K G+ +K
Sbjct: 166 DGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMD-LTLRNSLLNMYVKSGETEKAR 224
Query: 478 LVFDNIEGRDLISWNSLISGYGMHGLGDNAL------TTFDEMIKAGMKPDHVTFVTALS 531
+FD +D+ ++ S+I GY ++G +L T D+ + P+ VTF+ L
Sbjct: 225 KLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLM 284
Query: 532 ACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNE 591
ACSH+GLV G+ F M+ ++ ++P H+ C+VDL R+G L++A++ + MPI+PN
Sbjct: 285 ACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPIKPNT 344
Query: 592 YIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISA 651
IW LL +C H + ++ EE +I L+ G ++ LSNIYA+ G W++ +++R
Sbjct: 345 VIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVGDYVALSNIYASKGMWDEKSKMRDRV 404
Query: 652 KKKGLKKTPGQSWIEVRKKVYTFSAG 677
+K ++ PG+SWIE+ + F +G
Sbjct: 405 RK---RRMPGKSWIELGSIINEFVSG 427
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 169/410 (41%), Gaps = 95/410 (23%)
Query: 137 RKFGFFPDGFTLPLIIEACSHLGSSSL-CRIVHCHALELGFRNHLHVVNKLVGMYGKLGR 195
R+ F D F++ I+ S +SSL R +H +LGF + + LVG Y +G
Sbjct: 56 RQSPSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGD 115
Query: 196 MEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSS 255
++ A Q+FD P + N V WT+++S+
Sbjct: 116 VDYARQVFDETP----------------------------------EKQNIVLWTAMISA 141
Query: 256 HKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDY 315
+ E +ELFK M E+ + V +S CAD+ V EI+ IK
Sbjct: 142 YTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIK------ 195
Query: 316 LFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEK 375
RK + D L N+L++ Y +SG E+A +
Sbjct: 196 -----------RKRRLAMD------------LTLRNSLLNMYVKSGETEKARKLF----- 227
Query: 376 SLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM------QLAKVKPNCVTFSTVL 429
+ +R +V +++++I G+A G +ESLELF++M Q + PN VTF VL
Sbjct: 228 ----DESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVL 283
Query: 430 SVCAELAALNLGRELHGYAVRNLMDDNILVGNG----LINMYMKCGDFKKGHLVFDNIEG 485
C+ + G+ H ++ +MD N+ +++++ + G K H + +
Sbjct: 284 MACSHSGLVEEGKR-HFKSM--IMDYNLKPREAHFGCMVDLFCRSGHLKDAHEFINQMPI 340
Query: 486 R-DLISWNSLISGYGMHG---LGDNALTTFDEMIKAGMKPDHVTFVTALS 531
+ + + W +L+ +HG LG+ E+ + DHV ALS
Sbjct: 341 KPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDR-----DHVGDYVALS 385
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 166/389 (42%), Gaps = 64/389 (16%)
Query: 44 EDFFITLLQQCSTLQQARQLHSQTILTAAYRKPF-----LAAKLIALYARFGSVSHAQKV 98
+ F + + S+ Q+A L + I + F + L+ Y+ G V +A++V
Sbjct: 63 DSFSVLFAIKVSSAQKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQV 122
Query: 99 FNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHL 158
F+ P ++ +I LW ++I A + AIE++ M DG + + + AC+ L
Sbjct: 123 FDETPEKQ--NIVLWTAMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADL 180
Query: 159 GSSSLCRIVHCHALELGFR--NHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNT 216
G+ + ++ +++ R L + N L+ MY K G E A +LFD + + ++ +
Sbjct: 181 GAVQMGEEIYSRSIKRKRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTS 240
Query: 217 MVSGYAFNHDCVGASRIFKRMELEDWR------PNSVTWTSLLSSHKRCGLYDETLELFK 270
M+ GYA N + +FK+M+ D PN VT+ +L + GL +E FK
Sbjct: 241 MIFGYALNGQAQESLELFKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFK 300
Query: 271 LMRTRGCEISAEALAVVISVCADVVEVD-RSREIHGYVIKGGYEDYLFVKNALIDTYRKH 329
M +++ + + RE H ++D + +
Sbjct: 301 SM---------------------IMDYNLKPREAHF--------------GCMVDLFCRS 325
Query: 330 KHLGDAHNVFFDIKNK-NLESWNALISSYAESG---LCEEAHAVLLQLEKSLDGHQPLRP 385
HL DAH + K N W L+ + + G L EE + +L+ R
Sbjct: 326 GHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELD---------RD 376
Query: 386 NVISWSAVISGFASKGCGEESLELFRRMQ 414
+V + A+ + +ASKG +E ++ R++
Sbjct: 377 HVGDYVALSNIYASKGMWDEKSKMRDRVR 405
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 218 bits (554), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 209/414 (50%), Gaps = 18/414 (4%)
Query: 287 VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKN 346
+IS VD + HG IK G + L V+N+L+ Y L A +F +I ++
Sbjct: 124 LISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRD 183
Query: 347 LESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEES 406
+ SWN++I+ +G AH + ++ N+ISW+ +IS + S
Sbjct: 184 IVSWNSIIAGMVRNGDVLAAHKLFDEMPDK---------NIISWNIMISAYLGANNPGVS 234
Query: 407 LELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINM 466
+ LFR M A + N T +L+ C A L GR +H +R ++ ++++ LI+M
Sbjct: 235 ISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDM 294
Query: 467 YMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTF 526
Y KC + +FD++ R+ ++WN +I + +HG + L F+ MI ++PD VTF
Sbjct: 295 YGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTF 354
Query: 527 VTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMP 586
V L C+ AGLV+ G++ + MV EF+I+P H C+ +L AG +EA + ++N+P
Sbjct: 355 VGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLP 414
Query: 587 IE---PNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWED 643
E P W LL+S R + + E A ++ + + LL NIY+ GRWED
Sbjct: 415 DEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNYKYYHLLMNIYSVTGRWED 474
Query: 644 SARVRISAKKKGLKKTPGQSWIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQ 697
RVR K++ + + PG +++++ V+ + LG E + E +L+
Sbjct: 475 VNRVREMVKERKIGRIPGCGLVDLKEIVHG------LRLGCKEAEKVFTETSLE 522
Score = 125 bits (313), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 173/373 (46%), Gaps = 15/373 (4%)
Query: 50 LLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDH 109
L++ +++ Q+H++ I + + A +L+ +RFG S+ ++ ++
Sbjct: 28 LVEDSNSITHLFQVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIYRSI-----GK 82
Query: 110 IPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHC 169
+ N + +A + + A+ Y + +FGF PD +T +I ++ H
Sbjct: 83 LYCANPVFKAYLVSSSPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHG 142
Query: 170 HALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVG 229
A++ G L V N L+ MY G ++ A +LF +P R I+SWN++++G N D +
Sbjct: 143 QAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLA 202
Query: 230 ASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVIS 289
A ++F M N ++W ++S++ ++ LF+ M G + + L ++++
Sbjct: 203 AHKLFDEMP----DKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLN 258
Query: 290 VCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLES 349
C + R +H +I+ + + ALID Y K K +G A +F + +N +
Sbjct: 259 ACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVT 318
Query: 350 WNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLEL 409
WN +I ++ G E L E ++G LRP+ +++ V+ G A G +
Sbjct: 319 WNVMILAHCLHGRPEGG---LELFEAMINGM--LRPDEVTFVGVLCGCARAGLVSQGQSY 373
Query: 410 FRRM-QLAKVKPN 421
+ M ++KPN
Sbjct: 374 YSLMVDEFQIKPN 386
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 33/210 (15%)
Query: 420 PNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLV 479
P+ TF +++S + ++ G+ HG A+++ D + V N L++MY CG +
Sbjct: 116 PDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKKL 175
Query: 480 FDNIEGRDLISWNSLISGYGMHG---------------------------LGDN----AL 508
F I RD++SWNS+I+G +G LG N ++
Sbjct: 176 FVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSI 235
Query: 509 TTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDL 568
+ F EM++AG + + T V L+AC + + GR++ ++R F + +V L+D+
Sbjct: 236 SLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTF-LNSSVVIDTALIDM 294
Query: 569 LGRAGLLQEANDIVRNMPIEPNEYIWGALL 598
G+ + A I ++ I N+ W ++
Sbjct: 295 YGKCKEVGLARRIFDSLSIR-NKVTWNVMI 323
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 125/427 (29%), Positives = 222/427 (51%), Gaps = 15/427 (3%)
Query: 242 WRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSR 301
W+ V + +L+ S+ G Y +L LF M + + +I V
Sbjct: 48 WKTKCV-YNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGV 106
Query: 302 EIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESG 361
+HG +K G+ FV+ + + Y + L + +F DI N + + N+L+ + +G
Sbjct: 107 ALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNG 166
Query: 362 LCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM---QLAKV 418
+ A ++ + +V+SW+ VI+GF+ KG ++L +F M + A +
Sbjct: 167 EMDYAFEYFQRMPVT---------DVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVI 217
Query: 419 KPNCVTFSTVLSVCAEL--AALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKG 476
PN TF +VLS CA + LG+++HGY + + +G L++MY K GD +
Sbjct: 218 TPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMA 277
Query: 477 HLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHA 536
+FD I + + +WN++IS +G AL F+ M + + P+ +T + L+AC+ +
Sbjct: 278 LTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARS 337
Query: 537 GLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGA 596
LV G LF + E++I PT EHY C+VDL+GRAGLL +A + ++++P EP+ + GA
Sbjct: 338 KLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAANFIQSLPFEPDASVLGA 397
Query: 597 LLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGL 656
LL +C+ H++T++ Q++ L Q G ++ LS A + W ++ ++R + + G+
Sbjct: 398 LLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSNWSEAEKMRKAMIEAGI 457
Query: 657 KKTPGQS 663
+K P S
Sbjct: 458 RKIPAYS 464
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 162/350 (46%), Gaps = 49/350 (14%)
Query: 100 NAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLG 159
NA+ R ++N++IR+ ++ G ++ ++ ++ M P+ T P +I+A
Sbjct: 41 NALVASRWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSF 100
Query: 160 SSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVS 219
S S +H AL+ GF V V YG++G +E + ++FD + +++ N+++
Sbjct: 101 SVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLD 160
Query: 220 GYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLM--RTRGC 277
N + A F+RM + D V+WT++++ + GL+ + L +F M R
Sbjct: 161 ACGRNGEMDYAFEYFQRMPVTD----VVSWTTVINGFSKKGLHAKALMVFGEMIQNERAV 216
Query: 278 EISAEALAV-VISVCADVVE--VDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGD 334
EA V V+S CA+ + + ++IHGYV+ + AL+D Y K L
Sbjct: 217 ITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEM 276
Query: 335 AHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVI 394
A +F I++K + +WNA+IS+ A +G RP
Sbjct: 277 ALTIFDQIRDKKVCAWNAIISALASNG----------------------RP--------- 305
Query: 395 SGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGREL 444
+++LE+F M+ + V PN +T +L+ CA ++LG +L
Sbjct: 306 ---------KQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQL 346
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/240 (20%), Positives = 97/240 (40%), Gaps = 33/240 (13%)
Query: 63 LHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAV-------------------- 102
LH Q + PF+ + Y G + ++K+F+ +
Sbjct: 108 LHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGE 167
Query: 103 ---PFERLDHIPL-----WNSIIRANVSHGYFEFAIEIYVGM---RKFGFFPDGFTLPLI 151
FE +P+ W ++I G A+ ++ M + P+ T +
Sbjct: 168 MDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSV 227
Query: 152 IEACSHL--GSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR 209
+ +C++ G L + +H + + + L+ MYGK G +E A +FD + +
Sbjct: 228 LSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDK 287
Query: 210 TILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELF 269
+ +WN ++S A N A +F+ M+ PN +T ++L++ R L D ++LF
Sbjct: 288 KVCAWNAIISALASNGRPKQALEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLF 347
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 126/405 (31%), Positives = 206/405 (50%), Gaps = 16/405 (3%)
Query: 268 LFKLMRTRGCEISAEALAVVISVCADVVEVDRS--REIHGYVIKGGYEDYLFVKNALIDT 325
F MR R V CA D + + +H ++ G LF N LI
Sbjct: 102 FFVEMRRRSVPPDFHTFPFVFKACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRV 161
Query: 326 YRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRP 385
Y + A +F + +++ ++N LI GL + V + L PLR
Sbjct: 162 YSLIAPIDSALQLFDENPQRDVVTYNVLID-----GLVKAREIVR---ARELFDSMPLR- 212
Query: 386 NVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELH 445
+++SW+++ISG+A E+++LF M +KP+ V + LS CA+ G+ +H
Sbjct: 213 DLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIH 272
Query: 446 GYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGD 505
Y R + + + GL++ Y KCG +F+ + L +WN++I+G MHG G+
Sbjct: 273 DYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGE 332
Query: 506 NALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACL 565
+ F +M+ +G+KPD VTF++ L CSH+GLV RNLF QM + + ++HY C+
Sbjct: 333 LTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCM 392
Query: 566 VDLLGRAGLLQEANDIVRNMPIEPNE----YIWGALLNSCRTHKDTKIVEETASQILTLN 621
DLLGRAGL++EA +++ MP + W LL CR H + +I E+ A+++ L+
Sbjct: 393 ADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALS 452
Query: 622 SQITGSFMLLSNIYAANGRWEDSARVR-ISAKKKGLKKTPGQSWI 665
+ G + ++ +YA RWE+ +VR I + K +KK G S +
Sbjct: 453 PEDGGVYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 119/472 (25%), Positives = 204/472 (43%), Gaps = 64/472 (13%)
Query: 50 LLQQCSTLQQARQLHSQTILTAAYRKPF-----LAAKLIALYARFGSVSHAQKVFN-AVP 103
LL+ C TL+ Q H+Q I + F A L A+ + S S +++V + A
Sbjct: 10 LLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVVSYATS 69
Query: 104 FERLDHIP---LWNSIIRANVSHGYFEFAIE-IYVGMRKFGFFPDGFTLPLIIEACSHL- 158
R P +N+IIR H + + +V MR+ PD T P + +AC+
Sbjct: 70 VFRFITNPSTFCFNTIIRICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFKACAAKK 129
Query: 159 -GSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTM 217
G +L + +HC AL G + L +N L+ +Y + ++ A QLFD P R ++++N +
Sbjct: 130 NGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVL 189
Query: 218 VSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGC 277
+ G + V A +F M L D V+W SL+S + + E ++LF M G
Sbjct: 190 IDGLVKAREIVRARELFDSMPLRDL----VSWNSLISGYAQMNHCREAIKLFDEMVALGL 245
Query: 278 EISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHN 337
+ A+ +S CA + + + IH Y + F+ L+D Y K + A
Sbjct: 246 KPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAME 305
Query: 338 VFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGF 397
+F +K L +WNA+ I+G
Sbjct: 306 IFELCSDKTLFTWNAM----------------------------------------ITGL 325
Query: 398 ASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNI 457
A G GE +++ FR+M + +KP+ VTF +VL C+ ++ R L +R+L D N
Sbjct: 326 AMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFD-QMRSLYDVNR 384
Query: 458 LVGN--GLINMYMKCGDFKKG-----HLVFDNIEGRDLISWNSLISGYGMHG 502
+ + + ++ + G ++ + D L++W+ L+ G +HG
Sbjct: 385 EMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHG 436
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 148/380 (38%), Gaps = 54/380 (14%)
Query: 57 LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP------------- 103
L + LH Q + F LI +Y+ + A ++F+ P
Sbjct: 133 LTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDVVTYNVLIDG 192
Query: 104 ----------FERLDHIPL-----WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTL 148
E D +PL WNS+I + AI+++ M G PD +
Sbjct: 193 LVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAI 252
Query: 149 PLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPV 208
+ AC+ G + +H + + LV Y K G ++ A ++F+
Sbjct: 253 VSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDTAMEIFELCSD 312
Query: 209 RTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLEL 268
+T+ +WN M++G A + + F++M +P+ VT+ S+L GL DE L
Sbjct: 313 KTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSHSGLVDEARNL 372
Query: 269 FKLMRT----------RGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFV 318
F MR+ GC A +I A+++E GG + L
Sbjct: 373 FDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIE--------QMPKDGGNREKLLA 424
Query: 319 KNALIDTYRKHKHLGDAHNVFFDIKNKNLES---WNALISSYAESGLCEEAHAVLLQLEK 375
+ L+ R H ++ A +K + E + ++ YA + EE ++++ +
Sbjct: 425 WSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEE----VVKVRE 480
Query: 376 SLDGHQPLRPNVISWSAVIS 395
+D + ++ NV +S V+S
Sbjct: 481 IIDRDKKVKKNV-GFSKVLS 499
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 213 bits (543), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/447 (27%), Positives = 213/447 (47%), Gaps = 48/447 (10%)
Query: 226 DCVGASRIFK------RMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEI 279
+C +R+ + R + D P + W +++ S+ R + ++++ M
Sbjct: 56 NCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSYIRHESPLDAIQVYLGMVRSTVLP 115
Query: 280 SAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVF 339
+L +VI + + +E+H ++ G+ F ++ I Y K +A VF
Sbjct: 116 DRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVF 175
Query: 340 FDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFAS 399
+ + L S W+A+I G
Sbjct: 176 DENPERKLGS----------------------------------------WNAIIGGLNH 195
Query: 400 KGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDD--NI 457
G E++E+F M+ + ++P+ T +V + C L L+L +LH ++ ++ +I
Sbjct: 196 AGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDI 255
Query: 458 LVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKA 517
++ N LI+MY KCG +F+ + R+++SW+S+I GY +G AL F +M +
Sbjct: 256 MMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREF 315
Query: 518 GMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQE 577
G++P+ +TFV LSAC H GLV G+ F M EF +EP + HY C+VDLL R G L+E
Sbjct: 316 GVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKE 375
Query: 578 ANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAA 637
A +V MP++PN +WG L+ C D ++ E A ++ L G +++L+N+YA
Sbjct: 376 AKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYAL 435
Query: 638 NGRWEDSARVRISAKKKGLKKTPGQSW 664
G W+D RVR K K + K P S+
Sbjct: 436 RGMWKDVERVRKLMKTKKVAKIPAYSY 462
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 115/482 (23%), Positives = 209/482 (43%), Gaps = 66/482 (13%)
Query: 65 SQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER-LDHIP---LWNSIIRAN 120
S T L+ R LA L + S++ +++ + R LD P LWN+I+R+
Sbjct: 37 SVTPLSPQDRNKLLAT----LLSNCTSLARVRRIHGDIFRSRILDQYPIAFLWNNIMRSY 92
Query: 121 VSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHL 180
+ H AI++Y+GM + PD ++LP++I+A + +L + +H A+ LGF
Sbjct: 93 IRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDE 152
Query: 181 HVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELE 240
+ + +Y K G E+A ++FD P R + SWN ++ G NH
Sbjct: 153 FCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGG--LNH--------------- 195
Query: 241 DWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRS 300
G +E +E+F M+ G E + V + C + ++ +
Sbjct: 196 ------------------AGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLA 237
Query: 301 REIHGYVIKGGYEDY--LFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYA 358
++H V++ E+ + + N+LID Y K + A ++F +++ +N+ SW+++I YA
Sbjct: 238 FQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYA 297
Query: 359 ESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLA-K 417
+G EA Q+ + +RPN I++ V+S G EE F M+ +
Sbjct: 298 ANGNTLEALECFRQMREF-----GVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFE 352
Query: 418 VKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGH 477
++P + ++ + + L +E M N++V L+ K GD +
Sbjct: 353 LEPGLSHYGCIVDLLSRDGQL---KEAKKVVEEMPMKPNVMVWGCLMGGCEKFGDVEMAE 409
Query: 478 LVFDNIEGRDLISWNS-----LISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSA 532
V + +L WN L + Y + G+ + E ++ MK V + A S
Sbjct: 410 WVAPYMV--ELEPWNDGVYVVLANVYALRGMWKDV-----ERVRKLMKTKKVAKIPAYSY 462
Query: 533 CS 534
S
Sbjct: 463 AS 464
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 116/224 (51%), Gaps = 5/224 (2%)
Query: 53 QCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPL 112
Q ++LHS + F + I LY + G +A+KVF+ P +L
Sbjct: 129 QIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGS--- 185
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL 172
WN+II G A+E++V M++ G PD FT+ + +C LG SL +H L
Sbjct: 186 WNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVL 245
Query: 173 ELGF--RNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGA 230
+ ++ + ++N L+ MYGK GRM+ A +F+ M R ++SW++M+ GYA N + + A
Sbjct: 246 QAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEA 305
Query: 231 SRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRT 274
F++M RPN +T+ +LS+ GL +E F +M++
Sbjct: 306 LECFRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKS 349
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 211 bits (538), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 139/469 (29%), Positives = 231/469 (49%), Gaps = 63/469 (13%)
Query: 258 RCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLF 317
R G ++TL LF + ++S+ V+ C+ + + R++H +IK G E
Sbjct: 61 RSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTI 120
Query: 318 VKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAV-------- 369
K ALID Y K+ HL D+ VF ++ K+L SWNAL+S + +G +EA V
Sbjct: 121 SKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRER 180
Query: 370 -------------------LLQLEKSLDGHQPL--RPNVISWSAVISGFASKGCGEESLE 408
+LQ K + + R V+ +A+IS ++S G E+++
Sbjct: 181 VEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGRDLVVLGTAMISFYSSVGLINEAMK 240
Query: 409 LFRRMQ---------------------------LAKVKPNCVTFSTVLSVCAELAALNLG 441
++ + +++ +PN S+ L+ C++ + L +G
Sbjct: 241 VYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMSRQRPNVRVLSSSLAGCSDNSDLWIG 300
Query: 442 RELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMH 501
+++H A+RN + + NGL++MY KCG + +F I + ++SW S+I Y ++
Sbjct: 301 KQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVN 360
Query: 502 GLGDNALTTFDEMIK--AGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTV 559
G G AL F EM + +G+ P+ VTF+ +SAC+HAGLV G+ F M ++R+ P
Sbjct: 361 GDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGT 420
Query: 560 EHYACLVDLLGRAGLLQEANDIVRNMPIEPNE----YIWGALLNSCRTHKDTKIVEETAS 615
EHY C +D+L +AG +E +V M N+ IW A+L++C + D E A
Sbjct: 421 EHYVCFIDILSKAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVAR 480
Query: 616 QILTLNSQITGS-FMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQS 663
+++ S ++L+SN YAA G+W+ +R K KGL KT G S
Sbjct: 481 RLMEETGPENASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHS 529
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 119/232 (51%), Gaps = 13/232 (5%)
Query: 49 TLLQQCSTL---QQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
++++ C++L QQ +Q+H+ ++T L +I+ Y+ G ++ A KV+N++
Sbjct: 190 SVVKTCASLKILQQGKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVH 248
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCR 165
D + L NS+I + + ++ A + R P+ L + CS + +
Sbjct: 249 T-DEVML-NSLISGCIRNRNYKEAFLLMSRQR-----PNVRVLSSSLAGCSDNSDLWIGK 301
Query: 166 IVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNH 225
+HC AL GF + + N L+ MYGK G++ A +F +P ++++SW +M+ YA N
Sbjct: 302 QIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNG 361
Query: 226 DCVGASRIFKRM--ELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTR 275
D V A IF+ M E PNSVT+ ++S+ GL E E F +M+ +
Sbjct: 362 DGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEK 413
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 160/383 (41%), Gaps = 73/383 (19%)
Query: 47 FITLLQQCSTL---QQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F +L CS L + RQ+H+ I A LI +Y+++G + + +VF +V
Sbjct: 87 FTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESV- 145
Query: 104 FERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL 163
E D + WN+++ + +G + A+ ++ M + FTL +++ C+ L
Sbjct: 146 -EEKDLVS-WNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQ 203
Query: 164 CRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTI-LSWNTMVSGYA 222
+ VH + G R+ + + ++ Y +G + +A ++++ + V T + N+++SG
Sbjct: 204 GKQVHAMVVVTG-RDLVVLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCI 262
Query: 223 FNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAE 282
N + A + R RPN +S L+
Sbjct: 263 RNRNYKEAFLLMSRQ-----RPNVRVLSSSLAG--------------------------- 290
Query: 283 ALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDI 342
C+D ++ ++IH ++ G+ + N L+D Y K + A +F I
Sbjct: 291 --------CSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAI 342
Query: 343 KNKNLESWNALISSYAESG-----------LCEEAHAVLLQLEKSLDGHQPLRPNVISWS 391
+K++ SW ++I +YA +G +CEE VL PN +++
Sbjct: 343 PSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVL--------------PNSVTFL 388
Query: 392 AVISGFASKGCGEESLELFRRMQ 414
VIS A G +E E F M+
Sbjct: 389 VVISACAHAGLVKEGKECFGMMK 411
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 157/592 (26%), Positives = 275/592 (46%), Gaps = 69/592 (11%)
Query: 113 WNSIIRANV---SHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHC 169
W++I+ A S G A+E+ K PD L ++ + G SLCR +H
Sbjct: 24 WSTIVPALARFGSIGVLRAAVELINDGEK----PDASPLVHLLRVSGNYGYVSLCRQLHG 79
Query: 170 HALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVG 229
+ + GF ++ + N L+ Y +EDA ++FD MP
Sbjct: 80 YVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMP---------------------- 117
Query: 230 ASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVIS 289
P+ ++W SL+S + + G + E + LF + + + ++
Sbjct: 118 -------------DPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALA 164
Query: 290 VCADVVEVDRSREIHGYVIKGGYED-YLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE 348
CA + IH ++K G E + V N LID Y K + DA VF ++ K+
Sbjct: 165 ACARLHLSPLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTV 224
Query: 349 SWNALISSYAESGLCEEAHAVLLQLE---------------KSLDGHQPLR-------PN 386
SWNA+++S + +G E Q+ KS D + + PN
Sbjct: 225 SWNAIVASCSRNGKLELGLWFFHQMPNPDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPN 284
Query: 387 VISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHG 446
SW+ +++G+ + E+ E F +M + V+ + + S VL+ A LA + G +H
Sbjct: 285 SSSWNTILTGYVNSEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHA 344
Query: 447 YAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDN 506
A + +D ++V + LI+MY KCG K L+F + ++LI WN +ISGY +G
Sbjct: 345 CAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYARNGDSIE 404
Query: 507 ALTTFDEMIKAG-MKPDHVTFVTALSACSHAGL-VAAGRNLFYQMVREFRIEPTVEHYAC 564
A+ F+++ + +KPD TF+ L+ CSH + + F M+ E+RI+P+VEH
Sbjct: 405 AIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKPSVEHCCS 464
Query: 565 LVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQI 624
L+ +G+ G + +A +++ + W ALL +C KD K + A++++ L
Sbjct: 465 LIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAKMIELGDAD 524
Query: 625 TGSFM--LLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWIEVRKKVYTF 674
++ ++SN+YA + RW + ++R ++ G+ K G SWI+ R K ++
Sbjct: 525 KDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWIDSRTKCSSY 576
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 150/343 (43%), Gaps = 31/343 (9%)
Query: 61 RQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRAN 120
RQLH L+ L+ Y S+ A KVF+ +P + WNS++
Sbjct: 75 RQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDP---DVISWNSLVSGY 131
Query: 121 VSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGF-RNH 179
V G F+ I +++ + + FP+ F+ + AC+ L S L +H ++LG + +
Sbjct: 132 VQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGN 191
Query: 180 LHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMEL 239
+ V N L+ MYGK G M+DA +F M + +SWN +V+ + N F +M
Sbjct: 192 VVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN 251
Query: 240 EDW---------------------------RPNSVTWTSLLSSHKRCGLYDETLELFKLM 272
D PNS +W ++L+ + E E F M
Sbjct: 252 PDTVTYNELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKM 311
Query: 273 RTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHL 332
+ G +L++V++ A + V IH K G + + V +ALID Y K L
Sbjct: 312 HSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGML 371
Query: 333 GDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEK 375
A +F+ + KNL WN +IS YA +G EA + QL++
Sbjct: 372 KHAELMFWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQ 414
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 209 bits (531), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 218/453 (48%), Gaps = 56/453 (12%)
Query: 152 IEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTI 211
+ CS+ S + +H ++ N +V +L+ + G + A +F+ + +
Sbjct: 27 LRTCSNF---SQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 212 LSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKL 271
+WN M+ + NH +P E L LF L
Sbjct: 84 FTWNLMIRSLSVNH-----------------KPR------------------EALLLFIL 108
Query: 272 MR-TRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHK 330
M + + VI C + ++HG IK G+ + +F +N L+D Y K
Sbjct: 109 MMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCG 168
Query: 331 HLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISW 390
VF + +++ SW ++ + + A V Q+ P+R NV+SW
Sbjct: 169 KPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQM--------PMR-NVVSW 219
Query: 391 SAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVR 450
+A+I+ + +E+ +LFRRMQ+ VKPN T +L +L +L++GR +H YA +
Sbjct: 220 TAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHK 279
Query: 451 NLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTT 510
N + +G LI+MY KCG + VFD ++G+ L +WNS+I+ G+HG G+ AL+
Sbjct: 280 NGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSL 339
Query: 511 F-DEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLL 569
F + +A ++PD +TFV LSAC++ G V G F +M++ + I P EH AC++ LL
Sbjct: 340 FEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLL 399
Query: 570 GRAGLLQEANDIVRNMPIEP-------NEYIWG 595
+A +++A+++V +M +P NEY G
Sbjct: 400 EQALEVEKASNLVESMDSDPDFNSSFGNEYTDG 432
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/373 (29%), Positives = 185/373 (49%), Gaps = 13/373 (3%)
Query: 50 LLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDH 109
L+ CS Q +Q+H++ I L +LI++ + FG +A VFN + +
Sbjct: 26 FLRTCSNFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQL---QSPS 82
Query: 110 IPLWNSIIRA-NVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVH 168
WN +IR+ +V+H E + + M D FT P +I+AC S L VH
Sbjct: 83 TFTWNLMIRSLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVH 142
Query: 169 CHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCV 228
A++ GF N + N L+ +Y K G+ + ++FD MP R+I+SW TM+ G N
Sbjct: 143 GLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLD 202
Query: 229 GASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVI 288
A +F +M + N V+WT++++++ + DE +LF+ M+ + + + ++
Sbjct: 203 SAEIVFNQMPMR----NVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLL 258
Query: 289 SVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE 348
+ + R +H Y K G+ F+ ALID Y K L DA VF ++ K+L
Sbjct: 259 QASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLA 318
Query: 349 SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLE 408
+WN++I+S G EEA L L + ++ + P+ I++ V+S A+ G ++ L
Sbjct: 319 TWNSMITSLGVHGCGEEA----LSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLR 374
Query: 409 LFRRM-QLAKVKP 420
F RM Q+ + P
Sbjct: 375 YFTRMIQVYGISP 387
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 129/289 (44%), Gaps = 32/289 (11%)
Query: 46 FFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
F I S+++ Q+H I + F L+ LY + G +KVF+ +P
Sbjct: 124 FVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGR 183
Query: 106 RL-----------------------DHIPL-----WNSIIRANVSHGYFEFAIEIYVGMR 137
+ + +P+ W ++I A V + + A +++ M+
Sbjct: 184 SIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQ 243
Query: 138 KFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRME 197
P+ FT+ +++A + LGS S+ R VH +A + GF + L+ MY K G ++
Sbjct: 244 VDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQ 303
Query: 198 DACQLFDGMPVRTILSWNTMVSGYAFNHDC--VGASRIFKRMELEDWRPNSVTWTSLLSS 255
DA ++FD M +++ +WN+M++ H C S + E P+++T+ +LS+
Sbjct: 304 DARKVFDVMQGKSLATWNSMITSLGV-HGCGEEALSLFEEMEEEASVEPDAITFVGVLSA 362
Query: 256 HKRCGLYDETLELF-KLMRTRGCEISAEALAVVISVCADVVEVDRSREI 303
G + L F ++++ G E A +I + +EV+++ +
Sbjct: 363 CANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQALEVEKASNL 411
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 202 bits (514), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 219/456 (48%), Gaps = 46/456 (10%)
Query: 248 TWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYV 307
TW L + E++ ++ M+ RG + + ++ CA + + R+I V
Sbjct: 80 TWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEV 139
Query: 308 IKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAH 367
+K G++ ++V N LI Y K DA VF ++ +N
Sbjct: 140 LKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERN--------------------- 178
Query: 368 AVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFST 427
V+SW+++++ G E F M + P+ T
Sbjct: 179 -------------------VVSWNSIMTALVENGKLNLVFECFCEMIGKRFCPDETTMVV 219
Query: 428 VLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRD 487
+LS C L+LG+ +H + ++ N +G L++MY K G + LVF+ + ++
Sbjct: 220 LLSACG--GNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVDKN 277
Query: 488 LISWNSLISGYGMHGLGDNALTTFDEMIK-AGMKPDHVTFVTALSACSHAGLVAAGRNLF 546
+ +W+++I G +G + AL F +M+K + ++P++VTF+ L ACSH GLV G F
Sbjct: 278 VWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYF 337
Query: 547 YQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKD 606
++M + +I+P + HY +VD+LGRAG L EA D ++ MP EP+ +W LL++C H D
Sbjct: 338 HEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLLSACSIHHD 397
Query: 607 TK---IVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQS 663
I E+ +++ L + +G+ ++++N +A W ++A VR K+ +KK G+S
Sbjct: 398 EDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGES 457
Query: 664 WIEVRKKVYTFSAGNIVHLGLDEVYVILEELALQMA 699
+E+ + F +G +Y +L+ Q+
Sbjct: 458 CLELGGSFHRFFSGYDPRSEYVSIYELLDLFKFQLT 493
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 173/396 (43%), Gaps = 49/396 (12%)
Query: 48 ITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNA--VPFE 105
+ L+ CS+++ Q+H Q L++ F+ ++L+ R S+S A+ + A +
Sbjct: 17 LIFLKLCSSIKHLLQIHGQIHLSSLQNDSFIISELV----RVSSLSLAKDLAFARTLLLH 72
Query: 106 RLDHIP-LWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLC 164
D P WN + R S +I +Y M++ G P+ T P +++AC+ +
Sbjct: 73 SSDSTPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAG 132
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFN 224
R + L+ GF ++V N L+ +YG + DA ++FD M R ++SWN++++ N
Sbjct: 133 RQIQVEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVEN 192
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
F M + + P+ T LLS+ CG L L KL
Sbjct: 193 GKLNLVFECFCEMIGKRFCPDETTMVVLLSA---CG---GNLSLGKL------------- 233
Query: 285 AVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN 344
+H V+ E + AL+D Y K L A VF + +
Sbjct: 234 ------------------VHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLVFERMVD 275
Query: 345 KNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGE 404
KN+ +W+A+I A+ G EEA LQL + +RPN +++ V+ + G +
Sbjct: 276 KNVWTWSAMIVGLAQYGFAEEA----LQLFSKMMKESSVRPNYVTFLGVLCACSHTGLVD 331
Query: 405 ESLELFRRMQ-LAKVKPNCVTFSTVLSVCAELAALN 439
+ + F M+ + K+KP + + ++ + LN
Sbjct: 332 DGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLN 367
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 192 bits (488), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 138/493 (27%), Positives = 222/493 (45%), Gaps = 82/493 (16%)
Query: 44 EDFFITLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFN 100
E F+ LL CS + RQ+H ++ + + L+ YA+ G ++ A + F+
Sbjct: 184 ERMFVCLLNLCSRRAEFELGRQVHGN-MVKVGVGNLIVESSLVYFYAQCGELTSALRAFD 242
Query: 101 AVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGS 160
+ E D I W ++I A G+ AI +++GM F P+ FT+ I++ACS +
Sbjct: 243 MM--EEKDVIS-WTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKA 299
Query: 161 SSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSG 220
R VH ++ + + V L+ MY K G + D ++FDGM R
Sbjct: 300 LRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNR----------- 348
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEIS 280
N+VTWTS++++H R G +E + LF++M+ R +
Sbjct: 349 ------------------------NTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIAN 384
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFF 340
+ ++ C V + +E+H +IK E +++ + L+ Y K DA NV
Sbjct: 385 NLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNV-- 442
Query: 341 DIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASK 400
L QL P R +V+SW+A+ISG +S
Sbjct: 443 -----------------------------LQQL--------PSR-DVVSWTAMISGCSSL 464
Query: 401 GCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVG 460
G E+L+ + M V+PN T+S+ L CA +L +GR +H A +N N+ VG
Sbjct: 465 GHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVG 524
Query: 461 NGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMK 520
+ LI+MY KCG + VFD++ ++L+SW ++I GY +G AL M G +
Sbjct: 525 SALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFE 584
Query: 521 PDHVTFVTALSAC 533
D F T LS C
Sbjct: 585 VDDYIFATILSTC 597
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 130/550 (23%), Positives = 247/550 (44%), Gaps = 84/550 (15%)
Query: 51 LQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHI 110
LQ + ++ +++H+ + + + LI+ R G + +A+KVF+++P + +
Sbjct: 92 LQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEK---NT 148
Query: 111 PLWNSIIRANVSHGYFEFAIEIYVGMRKFGF-FPDGFTLPLIIEACSHLGSSSLCRIVHC 169
W ++I + +G + A ++ K G F + ++ CS L R VH
Sbjct: 149 VTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHG 208
Query: 170 HALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVG 229
+ +++G N L V + LV Y + G + A + FD M + ++SW ++S + +
Sbjct: 209 NMVKVGVGN-LIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIK 267
Query: 230 ASRIFKRMELEDW-RPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVI 288
A +F M L W PN T S+L +
Sbjct: 268 AIGMFIGM-LNHWFLPNEFTVCSILKA--------------------------------- 293
Query: 289 SVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE 348
C++ + R++H V+K + +FV +L+D Y K + D VF + N+N
Sbjct: 294 --CSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRN-- 349
Query: 349 SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLE 408
++W+++I+ A +G GEE++
Sbjct: 350 --------------------------------------TVTWTSIIAAHAREGFGEEAIS 371
Query: 409 LFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYM 468
LFR M+ + N +T ++L C + AL LG+ELH ++N ++ N+ +G+ L+ +Y
Sbjct: 372 LFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVWLYC 431
Query: 469 KCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVT 528
KCG+ + V + RD++SW ++ISG G AL EMI+ G++P+ T+ +
Sbjct: 432 KCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSS 491
Query: 529 ALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIE 588
AL AC+++ + GR++ + + ++ V + L+ + + G + EA + +MP E
Sbjct: 492 ALKACANSESLLIGRSI-HSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSMP-E 549
Query: 589 PNEYIWGALL 598
N W A++
Sbjct: 550 KNLVSWKAMI 559
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/390 (23%), Positives = 158/390 (40%), Gaps = 81/390 (20%)
Query: 49 TLLQQCS---TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
++L+ CS L+ RQ+HS + F+ L+ +YA+ G +S +KVF+ +
Sbjct: 289 SILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNR 348
Query: 106 RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCR 165
+ W SII A+ G+ E AI ++ M++ + T+ I+ AC +G+ L +
Sbjct: 349 ---NTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGK 405
Query: 166 IVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNH 225
+H ++ ++++ + LV +Y K G DA + +P R +
Sbjct: 406 ELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDV-------------- 451
Query: 226 DCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALA 285
V+WT+++S G E L+ K M G E + +
Sbjct: 452 ---------------------VSWTAMISGCSSLGHESEALDFLKEMIQEGVEPNPFTYS 490
Query: 286 VVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK 345
+ CA+ + R IH K +FV +ALI H+
Sbjct: 491 SALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALI-------HM------------- 530
Query: 346 NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEE 405
YA+ G EA V + + N++SW A+I G+A G E
Sbjct: 531 -----------YAKCGFVSEAFRVFDSMPE---------KNLVSWKAMIMGYARNGFCRE 570
Query: 406 SLELFRRMQLAKVKPNCVTFSTVLSVCAEL 435
+L+L RM+ + + F+T+LS C ++
Sbjct: 571 ALKLMYRMEAEGFEVDDYIFATILSTCGDI 600
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 437 ALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLIS 496
+ L + +H A++ D I GN LI+ ++ GD VFD++ ++ ++W ++I
Sbjct: 97 GMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMID 156
Query: 497 GYGMHGLGDNALTTFDEMIKAGMK-PDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRI 555
GY +GL D A F++ +K G++ + FV L+ CS GR + MV+
Sbjct: 157 GYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVG 216
Query: 556 EPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSC 601
VE + LV + G L A +M E + W A++++C
Sbjct: 217 NLIVE--SSLVYFYAQCGELTSALRAF-DMMEEKDVISWTAVISAC 259
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 161/633 (25%), Positives = 279/633 (44%), Gaps = 93/633 (14%)
Query: 47 FITLLQQCST---LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVP 103
F ++L CS ++ Q+H + I F+ + L+ LYA V A K+F+
Sbjct: 115 FPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFD--- 171
Query: 104 FERLD-HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSS 162
E LD ++ + N ++R G + E+Y+ M G +G T +I CSH
Sbjct: 172 -EMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHD---- 226
Query: 163 LCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYA 222
R+V+ G + H VV G + I N +V Y+
Sbjct: 227 --RLVY-----EGKQLHSLVVKS-------------------GWNISNIFVANVLVDYYS 260
Query: 223 FNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAE 282
D G+ R F + +D ++W S++S G ++L+LF M+ G S
Sbjct: 261 ACGDLSGSMRSFNAVPEKDV----ISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIR 316
Query: 283 ALAVVISVCADVVEVDRSREIHGYVIKGGYE-DYLFVKNALIDTYRKHKHLGDAHNVFFD 341
++ C+ ++ ++IH YV+K G++ L V++ALID Y K + ++ ++
Sbjct: 317 PFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQS 376
Query: 342 IKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKG 401
+ NLE N+L++S G+ ++
Sbjct: 377 LPCLNLECCNSLMTSLMHCGITKDI----------------------------------- 401
Query: 402 CGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGY------AVRNLMDD 455
+E+F M + VT STVL +L+L LH A+++
Sbjct: 402 -----IEMFGLMIDEGTGIDEVTLSTVLKA----LSLSLPESLHSCTLVHCCAIKSGYAA 452
Query: 456 NILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMI 515
++ V LI+ Y K G + VFD ++ ++ S+I+GY +G+G + + EM
Sbjct: 453 DVAVSCSLIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMD 512
Query: 516 KAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLL 575
+ + PD VT ++ LS CSH+GLV G +F + ++ I P + YAC+VDLLGRAGL+
Sbjct: 513 RMNLIPDEVTILSVLSGCSHSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLV 572
Query: 576 QEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIY 635
++A ++ + + W +LL SCR H++ I A ++ L + ++ +S Y
Sbjct: 573 EKAERLLLQARGDADCVAWSSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFY 632
Query: 636 AANGRWEDSARVRISAKKKGLKKTPGQSWIEVR 668
G +E S ++R A + L + G S + V+
Sbjct: 633 FEIGDFEISRQIREIAASRELMREIGYSSVVVK 665
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 188/450 (41%), Gaps = 86/450 (19%)
Query: 90 GSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLP 149
G++ A + F+ + + +N +I N +G AIE+Y M G T P
Sbjct: 60 GNLLSAHEAFDEMSVR---DVVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFP 116
Query: 150 LIIEACSHLGSSSLCR---IVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGM 206
++ CS CR VHC + LGF ++ V + LVG+Y L ++ A +LFD M
Sbjct: 117 SVLSVCS---DELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDVALKLFDEM 173
Query: 207 PVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETL 266
R + N ++ + + ++ RMELE N +T+ ++
Sbjct: 174 LDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMI------------- 220
Query: 267 ELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYE-DYLFVKNALIDT 325
RGC S + L V +++H V+K G+ +FV N L+D
Sbjct: 221 --------RGC--SHDRL------------VYEGKQLHSLVVKSGWNISNIFVANVLVDY 258
Query: 326 YRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRP 385
Y L + F + K++ SWN+++S +C + +VL
Sbjct: 259 YSACGDLSGSMRSFNAVPEKDVISWNSIVS------VCADYGSVL--------------- 297
Query: 386 NVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELH 445
+SL+LF +MQ +P+ F + L+ C+ + + G+++H
Sbjct: 298 -------------------DSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIH 338
Query: 446 GYAVRNLMDDNIL-VGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLG 504
Y ++ D + L V + LI+MY KC + L++ ++ +L NSL++ G+
Sbjct: 339 CYVLKMGFDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGIT 398
Query: 505 DNALTTFDEMIKAGMKPDHVTFVTALSACS 534
+ + F MI G D VT T L A S
Sbjct: 399 KDIIEMFGLMIDEGTGIDEVTLSTVLKALS 428
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 170/381 (44%), Gaps = 45/381 (11%)
Query: 207 PVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETL 266
P + + N + + + + A F M + D VT+ L+S + R G +
Sbjct: 42 PSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDV----VTYNLLISGNSRYGCSLRAI 97
Query: 267 ELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTY 326
EL+ M + G SA V+SVC+D + ++H VI G+ +FV++AL+ Y
Sbjct: 98 ELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLY 157
Query: 327 RKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPN 386
+ + A +F ++ ++NL N L+ + ++G E+ +
Sbjct: 158 ACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTG---ESKRLF---------------- 198
Query: 387 VISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHG 446
E++ RM+L V N +T+ ++ C+ + G++LH
Sbjct: 199 ---------------------EVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHS 237
Query: 447 YAVRNLMD-DNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGD 505
V++ + NI V N L++ Y CGD F+ + +D+ISWNS++S +G
Sbjct: 238 LVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVL 297
Query: 506 NALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACL 565
++L F +M G +P F++ L+ CS + +G+ + +++ ++ + L
Sbjct: 298 DSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLHVQSAL 357
Query: 566 VDLLGRAGLLQEANDIVRNMP 586
+D+ G+ ++ + + +++P
Sbjct: 358 IDMYGKCNGIENSALLYQSLP 378
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 178 bits (452), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 180/331 (54%), Gaps = 25/331 (7%)
Query: 351 NALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFAS---KGC--GEE 405
L+ YA++G A V ++ P R +V +W+A+I G+ S KG +
Sbjct: 151 TTLLHFYAKNGDLRYARKVFDEM--------PERTSV-TWNAMIGGYCSHKDKGNHNARK 201
Query: 406 SLELFRRMQL--AKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVR--NLMDDNILVGN 461
++ LFRR + V+P T VLS ++ L +G +HGY + + ++ +G
Sbjct: 202 AMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGT 261
Query: 462 GLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKP 521
L++MY KCG VF+ ++ +++ +W S+ +G ++G G+ + M ++G+KP
Sbjct: 262 ALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKP 321
Query: 522 DHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI 581
+ +TF + LSA H GLV G LF M F + P +EHY C+VDLLG+AG +QEA
Sbjct: 322 NEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQF 381
Query: 582 VRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTL---NSQITGS----FMLLSNI 634
+ MPI+P+ + +L N+C + +T + EE +L + + +++GS ++ LSN+
Sbjct: 382 ILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNV 441
Query: 635 YAANGRWEDSARVRISAKKKGLKKTPGQSWI 665
A G+W + ++R K++ +K PG S++
Sbjct: 442 LAHKGKWVEVEKLRKEMKERRIKTRPGYSFV 472
Score = 110 bits (276), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 178/388 (45%), Gaps = 67/388 (17%)
Query: 47 FITLLQQCS-TLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFE 105
F++LLQQ S TL QA+Q+H+Q ++ + L KLI Y S + K+ + + F
Sbjct: 10 FLSLLQQNSKTLIQAKQIHAQLVINGCHDNS-LFGKLIGHYCSKPSTESSSKLAHLLVFP 68
Query: 106 RLDHIP--LWNSIIRAN-------VSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACS 156
R H L+N++++ + + Y + +Y+ R F F G +
Sbjct: 69 RFGHPDKFLFNTLLKCSKPEDSIRIFANYASKSSLLYLNERTF-VFVLGACARSASSSAL 127
Query: 157 HLGSSSLCRIVHCHALELGFRNHLHVV-NKLVGMYGKLGRMEDACQLFDGMPVRTILSWN 215
+G RIVH +LGF ++ L+ Y K G + A ++FD MP RT ++WN
Sbjct: 128 RVG-----RIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWN 182
Query: 216 TMVSGYAF-----NHDCVGASRIFKRMEL--EDWRPNSVTWTSLLSSHKRCGLYDETLEL 268
M+ GY NH+ A +F+R RP T +LS+ + GL LE+
Sbjct: 183 AMIGGYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGL----LEI 238
Query: 269 FKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGY--EDYLFVKNALIDTY 326
L +HGY+ K G+ E +F+ AL+D Y
Sbjct: 239 GSL-------------------------------VHGYIEKLGFTPEVDVFIGTALVDMY 267
Query: 327 RKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPN 386
K L +A +VF +K KN+ +W ++ + A +G E +L ++ +S ++PN
Sbjct: 268 SKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAES-----GIKPN 322
Query: 387 VISWSAVISGFASKGCGEESLELFRRMQ 414
I++++++S + G EE +ELF+ M+
Sbjct: 323 EITFTSLLSAYRHIGLVEEGIELFKSMK 350
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 73 YRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSH---GYFEFA 129
Y + L+ YA+ G + +A+KVF+ +P ER WN++I SH G A
Sbjct: 144 YESELIGTTLLHFYAKNGDLRYARKVFDEMP-ERTS--VTWNAMIGGYCSHKDKGNHN-A 199
Query: 130 IEIYVGMRKF-----GFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVV- 183
+ V R+F G P T+ ++ A S G + +VH + +LGF + V
Sbjct: 200 RKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFI 259
Query: 184 -NKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDW 242
LV MY K G + +A +F+ M V+ + +W +M +G A N + RM
Sbjct: 260 GTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGI 319
Query: 243 RPNSVTWTSLLSSHKRCGLYDETLELFKLMRTR 275
+PN +T+TSLLS+++ GL +E +ELFK M+TR
Sbjct: 320 KPNEITFTSLLSAYRHIGLVEEGIELFKSMKTR 352
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 12/170 (7%)
Query: 438 LNLGRELHGYAVR-NLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLIS 496
L +GR +HG + + ++ L+G L++ Y K GD + VFD + R ++WN++I
Sbjct: 127 LRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIG 186
Query: 497 GYGMHGLGDN-----ALTTFDEM--IKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQM 549
GY H N A+ F +G++P T V LSA S GL+ G +L +
Sbjct: 187 GYCSHKDKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIG-SLVHGY 245
Query: 550 VREFRIEPTVEHY--ACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGAL 597
+ + P V+ + LVD+ + G L A + M ++ N + W ++
Sbjct: 246 IEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVK-NVFTWTSM 294
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 123 bits (308), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 176/364 (48%), Gaps = 23/364 (6%)
Query: 230 ASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVIS 289
A RIF+ + +++L+S++ R GL++E + +F M+ G + VI
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 290 VCADV-VEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE 348
C +E + + + + G + N+L+ + A N+F ++ N+ +E
Sbjct: 312 ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIE 371
Query: 349 ----SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGE 404
S+N L+ + + G + A +L Q+ + + PNV+S+S VI GFA G +
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPV-----KRIMPNVVSYSTVIDGFAKAGRFD 426
Query: 405 ESLELFRRMQLAKVKPNCVTFSTVLSVCAELA----ALNLGRELHGYAVRNLMDDNILVG 460
E+L LF M+ + + V+++T+LS+ ++ AL++ RE+ ++ +++
Sbjct: 427 EALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK----DVVTY 482
Query: 461 NGLINMYMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIK 516
N L+ Y K G + + VF ++ +L+++++LI GY GL A+ F E
Sbjct: 483 NALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKS 542
Query: 517 AGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQ 576
AG++ D V + + A GLV + +L +M +E I P V Y ++D GR+ +
Sbjct: 543 AGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKE-GISPNVVTYNSIIDAFGRSATMD 601
Query: 577 EAND 580
+ D
Sbjct: 602 RSAD 605
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/473 (22%), Positives = 203/473 (42%), Gaps = 35/473 (7%)
Query: 78 LAAKLIALYARFGSVSHAQKVF-NAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGM 136
LA+ +I+ R+G V+ A+++F A + + ++++I A G E AI ++ M
Sbjct: 235 LASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSM 294
Query: 137 RKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALEL-GFRNHLHVVNKLVGMYGKLGR 195
+++G P+ T +I+AC G ++ G + N L+ + + G
Sbjct: 295 KEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGL 354
Query: 196 MEDACQLFDGMPVRTI----LSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTS 251
E A LFD M R I S+NT++ A I +M ++ PN V++++
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 252 LLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGG 311
++ + G +DE L LF MR G + + ++S+ V + + +I + G
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 312 YEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK----NLESWNALISSYAESGLCEEAH 367
+ + NAL+ Y K + VF ++K + NL +++ LI Y++ GL +EA
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 368 AVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFST 427
+ + + + LR +V+ +SA+I G ++ L M + PN VT+++
Sbjct: 535 EIFREFKSA-----GLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNS 589
Query: 428 VLSVCAELAALNLGRELHG-----YAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDN 482
++ A ++ + ++ L GN +I ++ + D
Sbjct: 590 IIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDC 649
Query: 483 IEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSH 535
EG +S L F +M + +KP+ VTF L+ACS
Sbjct: 650 EEGMQELSC---------------ILEVFRKMHQLEIKPNVVTFSAILNACSR 687
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 157/338 (46%), Gaps = 24/338 (7%)
Query: 257 KRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYL 316
K G Y+ F + R R + + +IS +V ++ I GGY + +
Sbjct: 214 KAVGFYE-----FAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTV 268
Query: 317 FVKNALIDTYRKHKHLGDAHNVFFDIKN----KNLESWNALISSYAESGLCEEAHAVLLQ 372
+ +ALI Y + +A +VF +K NL ++NA+I + + G+ Q
Sbjct: 269 YAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGM------EFKQ 322
Query: 373 LEKSLDGHQ--PLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLS 430
+ K D Q ++P+ I+++++++ + G E + LF M +++ + +++T+L
Sbjct: 323 VAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLD 382
Query: 431 VCAELAALNLGRE-LHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIE----G 485
+ ++L E L V+ +M N++ + +I+ + K G F + +F +
Sbjct: 383 AICKGGQMDLAFEILAQMPVKRIM-PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIA 441
Query: 486 RDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNL 545
D +S+N+L+S Y G + AL EM G+K D VT+ L G + +
Sbjct: 442 LDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKV 501
Query: 546 FYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVR 583
F +M RE + P + Y+ L+D + GL +EA +I R
Sbjct: 502 FTEMKRE-HVLPNLLTYSTLIDGYSKGGLYKEAMEIFR 538
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 116/245 (47%), Gaps = 16/245 (6%)
Query: 426 STVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEG 485
S ++S + + + + A + + + LI+ Y + G ++ VF++++
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 486 ----RDLISWNSLISGYGMHGLGDNALTTF-DEMIKAGMKPDHVTFVTALSACSHAGLVA 540
+L+++N++I G G+ + F DEM + G++PD +TF + L+ CS GL
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 541 AGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIE---PNEYIWGAL 597
A RNLF +M RIE V Y L+D + + G + A +I+ MP++ PN + +
Sbjct: 357 AARNLFDEMTNR-RIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTV 415
Query: 598 LN----SCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKK 653
++ + R + + E + L+ S+ L +IY GR E++ +
Sbjct: 416 IDGFAKAGRFDEALNLFGEMRYLGIALDRV---SYNTLLSIYTKVGRSEEALDILREMAS 472
Query: 654 KGLKK 658
G+KK
Sbjct: 473 VGIKK 477
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 150/367 (40%), Gaps = 41/367 (11%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLDH-IPLWNSIIRANVSHGYFEFAIEIYVGMRKFG 140
L+A+ +R G A+ +F+ + R++ + +N+++ A G + A EI M
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR 404
Query: 141 FFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDAC 200
P+ + +I+ + G + LG N L+ +Y K+GR E+A
Sbjct: 405 IMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEAL 464
Query: 201 QLFDGMPV----RTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSH 256
+ M + ++++N ++ GY ++F M+ E PN +T+++L+ +
Sbjct: 465 DILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGY 524
Query: 257 KRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYL 316
+ GLY E +E+F+ ++ G + +I V + + + K G +
Sbjct: 525 SKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNV 584
Query: 317 FVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKS 376
N++ID + + + + D N + SS A S L E ++QL
Sbjct: 585 VTYNSIIDAFGRSATMDRSA----DYSNGG----SLPFSSSALSALTETEGNRVIQLFGQ 636
Query: 377 L-------------DGHQPL---------------RPNVISWSAVISGFASKGCGEESLE 408
L +G Q L +PNV+++SA+++ + E++
Sbjct: 637 LTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSFEDASM 696
Query: 409 LFRRMQL 415
L ++L
Sbjct: 697 LLEELRL 703
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 101/190 (53%)
Query: 420 PNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLV 479
P+ F + CA L +L +++H + +++ + + N +I+M+ +C V
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRV 293
Query: 480 FDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLV 539
FD++ +D+ SW+ ++ Y +G+GD+AL F+EM K G+KP+ TF+T AC+ G +
Sbjct: 294 FDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGI 353
Query: 540 AAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLN 599
F M E I P EHY ++ +LG+ G L EA +R++P EP W A+ N
Sbjct: 354 EEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRN 413
Query: 600 SCRTHKDTKI 609
R H D +
Sbjct: 414 YARLHGDIDL 423
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
Query: 140 GFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDA 199
G PD L+ E+C++L S + VH H L+ FR + N ++ M+G+ + DA
Sbjct: 231 GAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDA 290
Query: 200 CQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRC 259
++FD M + + SW+ M+ Y+ N A +F+ M +PN T+ ++ +
Sbjct: 291 KRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATV 350
Query: 260 GLYDETLELFKLMRTR-GCEISAEALAVVISV---CADVVEVDR 299
G +E F M+ G E V+ V C +VE ++
Sbjct: 351 GGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQ 394
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 87/179 (48%), Gaps = 10/179 (5%)
Query: 261 LYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKN 320
LY + +EL +G E ++ CA++ ++ S+++H + ++ + + N
Sbjct: 220 LYKDAIELLD----KGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNN 275
Query: 321 ALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGH 380
+I + + + DA VF + +K+++SW+ ++ +Y+++G+ ++A L L + + H
Sbjct: 276 MVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDA----LHLFEEMTKH 331
Query: 381 QPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAK-VKPNCVTFSTVLSVCAELAAL 438
L+PN ++ V A+ G EE+ F M+ + P + VL V + L
Sbjct: 332 G-LKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHL 389
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 119 bits (298), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 197/404 (48%), Gaps = 18/404 (4%)
Query: 211 ILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFK 270
I++ +++++GY + A + +M + ++PN+VT+ +L+ E + L
Sbjct: 151 IVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALID 210
Query: 271 LMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHK 330
M +GC+ VV++ + D + + + +G E + + N +ID K+K
Sbjct: 211 RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 270
Query: 331 HLGDAHNVFFDIKNK----NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPN 386
H+ DA N+F +++ K N+ ++++LIS G +A +L + + + + P+
Sbjct: 271 HMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE-----RKINPD 325
Query: 387 VISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHG 446
V ++SA+I F +G E+ +L+ M + P+ VT+S++++ L+ +++
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 447 YAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLI----SWNSLISGYGMHG 502
+ V +++ N LI + K ++G VF + R L+ ++N LI G G
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Query: 503 LGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHY 562
D A F EM+ G+ P+ +T+ T L G + +F + R ++EPT+ Y
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEPTIYTY 504
Query: 563 ACLVDLLGRAGLLQEANDIVRNMP---IEPNEYIWGALLNS-CR 602
+++ + +AG +++ D+ N+ ++P+ + +++ CR
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/470 (20%), Positives = 202/470 (42%), Gaps = 18/470 (3%)
Query: 128 FAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLV 187
A+ + M K G+ P+ TL ++ H S + G++ + N L+
Sbjct: 134 LALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLI 193
Query: 188 GMYGKLGRMEDACQLFDGMPVR----TILSWNTMVSGYAFNHDCVGASRIFKRMELEDWR 243
+ +A L D M + ++++ +V+G D A + +ME
Sbjct: 194 HGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLE 253
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREI 303
P + + +++ + D+ L LFK M T+G + + +IS + + +
Sbjct: 254 PGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRL 313
Query: 304 HGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE----SWNALISSYAE 359
+I+ +F +ALID + K L +A ++ ++ ++++ ++++LI+ +
Sbjct: 314 LSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCM 373
Query: 360 SGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVK 419
+EA + E + H P+V++++ +I GF EE +E+FR M +
Sbjct: 374 HDRLDEAKQMF---EFMVSKH--CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428
Query: 420 PNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLV 479
N VT++ ++ + ++ +E+ V + + NI+ N L++ K G +K +V
Sbjct: 429 GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVV 488
Query: 480 FDNIEGRDL----ISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSH 535
F+ ++ + ++N +I G G ++ F + G+KPD V + T +S
Sbjct: 489 FEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCR 548
Query: 536 AGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM 585
G LF +M +E P Y L+ R G + + ++++ M
Sbjct: 549 KGSKEEADALFKEM-KEDGTLPNSGCYNTLIRARLRDGDREASAELIKEM 597
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 114/245 (46%), Gaps = 14/245 (5%)
Query: 364 EEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCV 423
++A A+ ++ KS +P P++I +S ++S A + + L +MQ + N
Sbjct: 63 DDAVALFGEMVKS----RPF-PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY 117
Query: 424 TFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDN- 482
T+S +++ + L L + G ++ + NI+ + L+N Y + + D
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 483 -IEG--RDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLV 539
+ G + +++N+LI G +H A+ D M+ G +PD VT+ ++ G
Sbjct: 178 FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDT 237
Query: 540 AAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMP---IEPNEYIWGA 596
NL +M + ++EP V Y ++D L + + +A ++ + M I PN + +
Sbjct: 238 DLAFNLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 597 LLNSC 601
L+ SC
Sbjct: 297 LI-SC 300
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 103/242 (42%), Gaps = 5/242 (2%)
Query: 57 LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERL-DHIPLWNS 115
L +A+Q+ + + LI + ++ V +VF + L + +N
Sbjct: 377 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 436
Query: 116 IIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELG 175
+I+ G + A EI+ M G P+ T +++ G +V +
Sbjct: 437 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 496
Query: 176 FRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR----TILSWNTMVSGYAFNHDCVGAS 231
++ N ++ K G++ED LF + ++ ++++NTM+SG+ A
Sbjct: 497 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 556
Query: 232 RIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVC 291
+FK M+ + PNS + +L+ + R G + + EL K MR+ G A + +V ++
Sbjct: 557 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
Query: 292 AD 293
D
Sbjct: 617 HD 618
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/507 (22%), Positives = 217/507 (42%), Gaps = 25/507 (4%)
Query: 112 LWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHA 171
++N +IR + H + + A ++ M+K+ PD T +I A G +
Sbjct: 145 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 204
Query: 172 LELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTI----LSWNTMVSGYAFNHDC 227
L N L+ G G +A ++ M + ++ N ++S Y
Sbjct: 205 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 264
Query: 228 VGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV- 286
A F+ M+ RP++ T+ ++ + G + L+LF MR + E + +
Sbjct: 265 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 324
Query: 287 -VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK 345
++ + + E++ R + ++ G + + NAL+ Y H G A +V DIK
Sbjct: 325 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 384
Query: 346 ----NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKG 401
++ S+ L++SY S +A V L + K + +PNV++++A+I + S G
Sbjct: 385 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK-----ERRKPNVVTYNALIDAYGSNG 439
Query: 402 CGEESLELFRRMQLAKVKPNCVTFSTVLSVCAE-LAALNLGRELHGYAVRNLMDDNILVG 460
E++E+FR+M+ +KPN V+ T+L+ C+ +N+ L R + + N
Sbjct: 440 FLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI-NLNTAAY 498
Query: 461 NGLINMYMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIK 516
N I Y+ + +K ++ ++ + D +++ LISG A++ EM
Sbjct: 499 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 558
Query: 517 AGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQ 576
+ + + L A S G V ++F QM + EP V Y ++ +
Sbjct: 559 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM-KMAGCEPDVIAYTSMLHAYNASEKWG 617
Query: 577 EANDIVRNMP---IEPNEYIWGALLNS 600
+A ++ M IEP+ AL+ +
Sbjct: 618 KACELFLEMEANGIEPDSIACSALMRA 644
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 111/285 (38%), Gaps = 36/285 (12%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLD-HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFG 140
L+ Y R A++VF + ER ++ +N++I A S+G+ A+EI+ M + G
Sbjct: 396 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455
Query: 141 FFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDAC 200
P+ ++ ++ ACS V A G + N +G Y +E A
Sbjct: 456 IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 515
Query: 201 QLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCG 260
L+ M + + + +SVT+T L+S R
Sbjct: 516 ALYQSMRKKKV-------------------------------KADSVTFTILISGSCRMS 544
Query: 261 LYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKN 320
Y E + K M ++ E + V+ + +V + I + G E +
Sbjct: 545 KYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYT 604
Query: 321 ALIDTYRKHKHLGDAHNVFFDIKNKNLE----SWNALISSYAESG 361
+++ Y + G A +F +++ +E + +AL+ ++ + G
Sbjct: 605 SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 649
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 82/468 (17%), Positives = 192/468 (41%), Gaps = 28/468 (5%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLD-HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFG 140
++ LY+ G + + + VF A+ E L +I +N+++ A HG A+ + +++ G
Sbjct: 326 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 385
Query: 141 FFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDAC 200
PD + ++ + + V + + ++ N L+ YG G + +A
Sbjct: 386 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 445
Query: 201 QLF-----DGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSS 255
++F DG+ ++S T+++ + + V + + N+ + S + S
Sbjct: 446 EIFRQMEQDGIKP-NVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGS 504
Query: 256 HKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRS----REIHGYVIKGG 311
+ ++ + L++ MR + + + ++IS + + + +E+ I
Sbjct: 505 YINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLT 564
Query: 312 YEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE----SWNALISSYAESGLCEEAH 367
E Y ++++ Y K + +A ++F +K E ++ +++ +Y S +A
Sbjct: 565 KEVY----SSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKAC 620
Query: 368 AVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFST 427
+ L++E + + P+ I+ SA++ F G L M+ ++ F
Sbjct: 621 ELFLEMEAN-----GIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFE 675
Query: 428 VLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNI---- 483
+ S C L +L L +I + N +++++ K G + +F I
Sbjct: 676 IFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASG 735
Query: 484 EGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALS 531
G +L ++ L+ G + + M AG++P + + +S
Sbjct: 736 VGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 783
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/507 (22%), Positives = 217/507 (42%), Gaps = 25/507 (4%)
Query: 112 LWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHA 171
++N +IR + H + + A ++ M+K+ PD T +I A G +
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 172 LELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTI----LSWNTMVSGYAFNHDC 227
L N L+ G G +A ++ M + ++ N ++S Y
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 228 VGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV- 286
A F+ M+ RP++ T+ ++ + G + L+LF MR + E + +
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 287 -VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK 345
++ + + E++ R + ++ G + + NAL+ Y H G A +V DIK
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 346 ----NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKG 401
++ S+ L++SY S +A V L + K + +PNV++++A+I + S G
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRK-----ERRKPNVVTYNALIDAYGSNG 307
Query: 402 CGEESLELFRRMQLAKVKPNCVTFSTVLSVCAE-LAALNLGRELHGYAVRNLMDDNILVG 460
E++E+FR+M+ +KPN V+ T+L+ C+ +N+ L R + + N
Sbjct: 308 FLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI-NLNTAAY 366
Query: 461 NGLINMYMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIK 516
N I Y+ + +K ++ ++ + D +++ LISG A++ EM
Sbjct: 367 NSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMED 426
Query: 517 AGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQ 576
+ + + L A S G V ++F QM + EP V Y ++ +
Sbjct: 427 LSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM-KMAGCEPDVIAYTSMLHAYNASEKWG 485
Query: 577 EANDIVRNMP---IEPNEYIWGALLNS 600
+A ++ M IEP+ AL+ +
Sbjct: 486 KACELFLEMEANGIEPDSIACSALMRA 512
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 111/285 (38%), Gaps = 36/285 (12%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLD-HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFG 140
L+ Y R A++VF + ER ++ +N++I A S+G+ A+EI+ M + G
Sbjct: 264 LLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 323
Query: 141 FFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDAC 200
P+ ++ ++ ACS V A G + N +G Y +E A
Sbjct: 324 IKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAI 383
Query: 201 QLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCG 260
L+ M + + + +SVT+T L+S R
Sbjct: 384 ALYQSMRKKKV-------------------------------KADSVTFTILISGSCRMS 412
Query: 261 LYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKN 320
Y E + K M ++ E + V+ + +V + I + G E +
Sbjct: 413 KYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYT 472
Query: 321 ALIDTYRKHKHLGDAHNVFFDIKNKNLE----SWNALISSYAESG 361
+++ Y + G A +F +++ +E + +AL+ ++ + G
Sbjct: 473 SMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 517
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 92/518 (17%), Positives = 217/518 (41%), Gaps = 74/518 (14%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLD-HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFG 140
++ LY+ G + + + VF A+ E L +I +N+++ A HG A+ + +++ G
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 141 FFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDAC 200
PD ++ C L+ YG+ + A
Sbjct: 254 IIPD-----VVSYTC------------------------------LLNSYGRSRQPGKAK 278
Query: 201 QLFDGMPVR----TILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSH 256
++F M ++++N ++ Y N A IF++ME + +PN V+ +LL++
Sbjct: 279 EVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAAC 338
Query: 257 KRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYL 316
R + ++RG ++ A I + E++++ ++ + K +
Sbjct: 339 SRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADS 398
Query: 317 FVKNALIDTYRKHKHLGDAHNVFFDIKNKNL----ESWNALISSYAESGLCEEAHAVLLQ 372
LI + +A + ++++ ++ E +++++ +Y++ G EA ++ Q
Sbjct: 399 VTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQ 458
Query: 373 LEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVC 432
++ + P+VI++++++ + + ++ ELF M+ ++P+ + S ++
Sbjct: 459 MKMA-----GCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMR-- 511
Query: 433 AELAALNLGRELHG-YAVRNLMDDNILVGNGLI--NMYMKCGDFKKGHLVFDNIEGRD-- 487
A N G + + + +LM + + G + ++ C ++ D I+ D
Sbjct: 512 ----AFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPY 567
Query: 488 LISW-----NSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAG 542
L S N ++ +G G + + F ++I +G+ + T+ L L+A G
Sbjct: 568 LPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEH-----LLAVG 622
Query: 543 RNLFYQMVREFR----IEPTVEHYACLVDLLGRAGLLQ 576
Y V E+ I+P+ + Y ++ R+ ++
Sbjct: 623 NWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGIE 660
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 117 bits (292), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 110/515 (21%), Positives = 241/515 (46%), Gaps = 24/515 (4%)
Query: 83 IALYARFGSVSHAQKVF--NAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFG 140
++L RF + A F + F L + + R + H + A++++ M K
Sbjct: 1 MSLAKRFVHLRKASPSFCLRGIYFSGLSYDGYREKLSRNALLHLKLDEAVDLFGEMVKSR 60
Query: 141 FFPDGFTLPLIIEACSHLGSSSLCRIVHCHALE-LGFRNHLHVVNKLVGMYGKLGRMEDA 199
FP ++ A + + L I +E LG ++L+ N ++ + ++ A
Sbjct: 61 PFPSIVEFSKLLSAIAKMKKFDLV-ISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFA 119
Query: 200 CQLFDGMPV----RTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSS 255
+ M +I++ N++++G+ + A + +M ++P++VT+T+L+
Sbjct: 120 LAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHG 179
Query: 256 HKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDY 315
+ E + L + M +GC+ VI+ E D + + + KG E
Sbjct: 180 LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 239
Query: 316 LFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE----SWNALISSYAESGLCEEAHAVLL 371
+ + + +ID+ K++H+ DA N+F ++ NK + ++++LIS G +A +L
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 372 QLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSV 431
+ + + + PNV++++++I FA +G E+ +LF M + PN VT++++++
Sbjct: 300 DMLE-----RKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLING 354
Query: 432 CAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDL--- 488
L+ +++ V +++ N LIN + K G +F ++ R L
Sbjct: 355 FCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGN 414
Query: 489 -ISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSA-CSHAGLVAAGRNLF 546
+++ +LI G+ DNA F +M+ G+ P+ +T+ T L C + L A +
Sbjct: 415 TVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA--MVV 472
Query: 547 YQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI 581
++ +++ ++EP + Y + + + +AG +++ D+
Sbjct: 473 FEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDL 507
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 106/477 (22%), Positives = 189/477 (39%), Gaps = 104/477 (21%)
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCH-A 171
+ ++I G + A+ + M K D +I+ SLC+ H A
Sbjct: 208 YGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVID--------SLCKYRHVDDA 259
Query: 172 LEL-------GFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTI----LSWNTMVSG 220
L L G R + + L+ GR DA +L M R I +++N+++
Sbjct: 260 LNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDA 319
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEIS 280
+A + A ++F M PN VT+ SL++ DE ++F LM ++ C
Sbjct: 320 FAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC--- 376
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFF 340
DVV N LI+ + K K + D +F
Sbjct: 377 ----------LPDVV----------------------TYNTLINGFCKAKKVVDGMELFR 404
Query: 341 DIKNK----NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISG 396
D+ + N ++ LI + ++ C+ A V Q+ DG + PN+++++ ++ G
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS--DG---VHPNIMTYNTLLDG 459
Query: 397 FASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDN 456
G E+++ +F +Q +K++P+ T+ N+M +
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEPDIYTY-------------------------NIMSEG 494
Query: 457 ILVGNGLINMYMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFD 512
+ K G + G +F ++ + D+I++N++ISG+ GL + A T F
Sbjct: 495 MC----------KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFI 544
Query: 513 EMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLL 569
+M + G PD T+ T + A G AA L +M R R Y + D+L
Sbjct: 545 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM-RSCRFAGDASTYGLVTDML 600
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 118/576 (20%), Positives = 247/576 (42%), Gaps = 60/576 (10%)
Query: 78 LAAKLIALYARFGSVSHAQKVFNAVPFERLD-HIPLWNSIIRANVSHGYFEFAIEIYVGM 136
+ A +I++ + G VS A +FN + + + + S+I A + G + A+ ++ M
Sbjct: 175 VVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKM 234
Query: 137 RKFGFFPDGFTLPLIIEACSHLGS--SSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLG 194
+ G P T +I+ +G+ + + +V + G + N L+ +
Sbjct: 235 EEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD-GIAPDAYTYNTLITCCKRGS 293
Query: 195 RMEDACQLFDGMPVRTI----LSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWT 250
++A Q+F+ M +++N ++ Y +H A ++ M L + P+ VT+
Sbjct: 294 LHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYN 353
Query: 251 SLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKG 310
SL+S++ R G+ DE +EL M +G + ++S +V+ + I +
Sbjct: 354 SLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNA 413
Query: 311 GYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK----NKNLESWNALISSYAESGLCEEA 366
G + + NA I Y + +F +I + ++ +WN L++ + ++G+ E
Sbjct: 414 GCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEV 473
Query: 367 HAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFS 426
V +++++ G P R +++ +IS ++ G E+++ ++RRM A V P+ T++
Sbjct: 474 SGVFKEMKRA--GFVPERE---TFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYN 528
Query: 427 TVLSVCAE----------LAALNLGR----------ELHGYA---------------VRN 451
TVL+ A LA + GR LH YA
Sbjct: 529 TVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSG 588
Query: 452 LMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNA 507
+++ ++ L+ + KC + F ++ R D+ + NS++S YG + A
Sbjct: 589 VIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKA 648
Query: 508 LTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVD 567
D M + G P T+ + + S + + +++ + I+P + Y ++
Sbjct: 649 NGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAK-GIKPDIISYNTVIY 707
Query: 568 LLGRAGLLQEANDI---VRNMPIEPNEYIWGALLNS 600
R +++A+ I +RN I P+ + + S
Sbjct: 708 AYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGS 743
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/493 (18%), Positives = 207/493 (41%), Gaps = 18/493 (3%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
IT ++ S Q+A Q+ + L+ +Y + A KV N +
Sbjct: 285 LITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG 344
Query: 107 LD-HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCR 165
I +NS+I A G + A+E+ M + G PD FT ++ G
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 166 IVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPV----RTILSWNTMVSGY 221
+ G + ++ N + MYG G+ + ++FD + V I++WNT+++ +
Sbjct: 405 SIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVF 464
Query: 222 AFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISA 281
N S +FK M+ + P T+ +L+S++ RCG +++ + +++ M G
Sbjct: 465 GQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDL 524
Query: 282 EALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFD 341
V++ A ++S ++ + G + +L+ Y K +G H++ +
Sbjct: 525 STYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEE 584
Query: 342 IKNKNLESWNALISSY----AESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGF 397
+ + +E L+ + ++ L EA +L++ + P++ + ++++S +
Sbjct: 585 VYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE-----RGFSPDITTLNSMVSIY 639
Query: 398 ASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNI 457
+ ++ + M+ P+ T+++++ + + A E+ + + +I
Sbjct: 640 GRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDI 699
Query: 458 LVGNGLINMYMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDE 513
+ N +I Y + + +F + D+I++N+ I Y + + A+
Sbjct: 700 ISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRY 759
Query: 514 MIKAGMKPDHVTF 526
MIK G +P+ T+
Sbjct: 760 MIKHGCRPNQNTY 772
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 164/369 (44%), Gaps = 33/369 (8%)
Query: 251 SLLSSHKRCGLYDETL-ELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIK 309
SL+ + G D L ELF+ + + S+E LA + + R ++ +
Sbjct: 105 SLIEPNFDSGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQ 164
Query: 310 GGYEDYL--FVKNALIDTYRKHKHLGDAHNVFFDIKNK----NLESWNALISSYAESGLC 363
Y+ L V +I K + A N+F ++ ++ S+ +LIS++A SG
Sbjct: 165 KDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRY 224
Query: 364 EEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESL-ELFRRMQLAKVKPNC 422
EA V ++E+ DG +P +I+++ +++ F G + L +M+ + P+
Sbjct: 225 REAVNVFKKMEE--DG---CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDA 279
Query: 423 VTFSTVLSVCA------ELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKG 476
T++T+++ C E A + + G++ + + N L+++Y K K+
Sbjct: 280 YTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSY------DKVTYNALLDVYGKSHRPKEA 333
Query: 477 HLVFD----NIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSA 532
V + N ++++NSLIS Y G+ D A+ ++M + G KPD T+ T LS
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Query: 533 CSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPI---EP 589
AG V + ++F +M R +P + + + + G G E I + + P
Sbjct: 394 FERAGKVESAMSIFEEM-RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSP 452
Query: 590 NEYIWGALL 598
+ W LL
Sbjct: 453 DIVTWNTLL 461
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/357 (19%), Positives = 150/357 (42%), Gaps = 14/357 (3%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLD-HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFG 140
I +Y G + K+F+ + L I WN+++ +G ++ M++ G
Sbjct: 425 FIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAG 484
Query: 141 FFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDA- 199
F P+ T +I A S GS V+ L+ G L N ++ + G E +
Sbjct: 485 FVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSE 544
Query: 200 ---CQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSH 256
++ DG L++ +++ YA + + + + P +V +L+
Sbjct: 545 KVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVC 604
Query: 257 KRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYL 316
+C L E F ++ RG L ++S+ V ++ + Y+ + G+ +
Sbjct: 605 SKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSM 664
Query: 317 FVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE----SWNALISSYAESGLCEEAHAVLLQ 372
N+L+ + + G + + +I K ++ S+N +I +Y + +A + +
Sbjct: 665 ATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSE 724
Query: 373 LEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVL 429
+ S + P+VI+++ I +A+ EE++ + R M +PN T+++++
Sbjct: 725 MRNS-----GIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/492 (20%), Positives = 224/492 (45%), Gaps = 26/492 (5%)
Query: 129 AIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVG 188
A+ ++ M K FP ++ A + + L + LG ++L+ + L+
Sbjct: 65 AVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILIN 124
Query: 189 MYGKLGRMEDACQLFDGM------PVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDW 242
+ + ++ A + M P I++ N++++G+ + A + +M +
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEP--DIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGY 182
Query: 243 RPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSRE 302
+P+S T+ +L+ R E + L M +GC+ +V++ ++D +
Sbjct: 183 QPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALS 242
Query: 303 IHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK----NLESWNALISSYA 358
+ + +G E + + N +ID +K++ DA N+F ++ NK N+ ++N+LI
Sbjct: 243 LLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 302
Query: 359 ESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKV 418
G +A +L + + + + PNV+++SA+I F +G E+ +L+ M +
Sbjct: 303 NYGRWSDASRLLSDMIE-----RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 357
Query: 419 KPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHL 478
P+ T+S++++ L+ + + + N++ N LI + K +G
Sbjct: 358 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGME 417
Query: 479 VFDNIEGRDL----ISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACS 534
+F + R L +++ +LI G+ DNA F +M+ G+ PD +T+ L
Sbjct: 418 LFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLC 477
Query: 535 HAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMP---IEPNE 591
+ G V +F + R ++EP + Y +++ + +AG +++ D+ ++ ++PN
Sbjct: 478 NNGKVETALVVFEYLQRS-KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNV 536
Query: 592 YIWGALLNS-CR 602
+ +++ CR
Sbjct: 537 VTYTTMMSGFCR 548
Score = 107 bits (266), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 110/527 (20%), Positives = 227/527 (43%), Gaps = 30/527 (5%)
Query: 89 FGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTL 148
FG + ++ + V F +L ++I + N F+ I + M+ G + +T
Sbjct: 69 FGDMVKSRPFPSIVEFSKL-----LSAIAKMN----KFDLVISLGEQMQNLGISHNLYTY 119
Query: 149 PLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPV 208
++I SL V ++LG+ + +N L+ + R+ DA L M
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 209 RTI----LSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDE 264
++NT++ G ++ A + RM ++ +P+ VT+ +++ + G D
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 265 TLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALID 324
L L K M E +I + V+ + + + G + N+LI
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 325 TYRKHKHLGDAHNVFFDIK----NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGH 380
+ DA + D+ N N+ +++ALI ++ + G EA + ++ K
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK----- 354
Query: 381 QPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNL 440
+ + P++ ++S++I+GF +E+ +F M PN VT++T++ + ++
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 441 GRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGR----DLISWNSLIS 496
G EL + + N + LI+ + + + +VF + D+++++ L+
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 497 GYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIE 556
G +G + AL F+ + ++ M+PD T+ + AG V G +LF + + ++
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK-GVK 533
Query: 557 PTVEHYACLVDLLGRAGLLQEANDIVRNMPIE---PNEYIWGALLNS 600
P V Y ++ R GL +EA+ + R M E P+ + L+ +
Sbjct: 534 PNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA 580
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 98/473 (20%), Positives = 201/473 (42%), Gaps = 20/473 (4%)
Query: 126 FEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNK 185
A+ + M K G+ PD TL ++ H S + +E+G++ N
Sbjct: 132 LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNT 191
Query: 186 LVGMYGKLGRMEDACQLFDGMPVR----TILSWNTMVSGYAFNHDCVGASRIFKRMELED 241
L+ + R +A L D M V+ ++++ +V+G D A + K+ME
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGK 251
Query: 242 WRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSR 301
P V + +++ + ++ L LF M +G + +I + +
Sbjct: 252 IEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 311
Query: 302 EIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE----SWNALISSY 357
+ +I+ + +ALID + K L +A ++ ++ ++++ ++++LI+ +
Sbjct: 312 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 371
Query: 358 AESGLCEEA-HAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLA 416
+EA H L + K PNV++++ +I GF +E +ELFR M
Sbjct: 372 CMHDRLDEAKHMFELMISKDC------FPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425
Query: 417 KVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKG 476
+ N VT++T++ + + + + V + + +I+ + L++ G +
Sbjct: 426 GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Query: 477 HLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSA 532
+VF+ ++ D+ ++N +I G G ++ F + G+KP+ VT+ T +S
Sbjct: 486 LVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 545
Query: 533 CSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM 585
GL LF +M E + P Y L+ R G + +++R M
Sbjct: 546 FCRKGLKEEADALFREMKEEGPL-PDSGTYNTLIRAHLRDGDKAASAELIREM 597
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/239 (20%), Positives = 100/239 (41%), Gaps = 15/239 (6%)
Query: 57 LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSI 116
L +A+ + I + LI + + V ++F + L + N++
Sbjct: 377 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGL----VGNTV 432
Query: 117 IRANVSHGYFEF-----AIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHA 171
+ HG+F+ A ++ M G PD T ++++ + G +V +
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL 492
Query: 172 LELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR----TILSWNTMVSGYAFNHDC 227
++ N ++ K G++ED LF + ++ ++++ TM+SG+
Sbjct: 493 QRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 552
Query: 228 VGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
A +F+ M+ E P+S T+ +L+ +H R G + EL + MR+ C +A +
Sbjct: 553 EEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRS--CRFVGDASTI 609
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 207/439 (47%), Gaps = 32/439 (7%)
Query: 177 RNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKR 236
R+ L + ++G KLG D I++ +++++GY A + +
Sbjct: 128 RSQLPLALAVLGKMMKLGYEPD------------IVTLSSLLNGYCHGKRISEAVALVDQ 175
Query: 237 MELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVE 296
M + +++PN+VT+ +L+ E + L M RGC+ V++ +
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235
Query: 297 VDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK----NLESWNA 352
+D + + + KG E + + +ID +K++ DA N+F ++ NK N+ ++N+
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 353 LISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRR 412
LI G +A +L + + + + PNV+++SA+I F +G E+ +L+
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIE-----RKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350
Query: 413 MQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGD 472
M + P+ T+S++++ L+ + + + N++ N LI + K
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410
Query: 473 FKKGHLVFDNIEGRDLI----SWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVT 528
++G +F + R L+ ++N+LI G G D A F +M+ G+ PD +T+
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470
Query: 529 ALSA-CSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMP- 586
L C + L A + ++ +++ ++EP + Y +++ + +AG +++ D+ ++
Sbjct: 471 LLDGLCKYGKLEKAL--VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 528
Query: 587 --IEPNEYIWGALLNS-CR 602
++PN I+ +++ CR
Sbjct: 529 KGVKPNVIIYTTMISGFCR 547
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 111/535 (20%), Positives = 216/535 (40%), Gaps = 73/535 (13%)
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRI 166
L I +N ++ A F+ I + M+ D ++ ++I L
Sbjct: 77 LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALA 136
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR----TILSWNTMVSGYA 222
V ++LG+ + ++ L+ Y R+ +A L D M V +++NT++ G
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196
Query: 223 FNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAE 282
++ A + RM +P+ T+ ++++ + G D L L K M E
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256
Query: 283 ALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDI 342
+I + V+ + + + G + N+LI + DA + D+
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 343 K----NKNLESWNALISSYAESGLCEEAHAVLLQL-EKSLDG--------------HQPL 383
N N+ +++ALI ++ + G EA + ++ ++S+D H L
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 384 R---------------PNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTV 428
PNV++++ +I GF EE +ELFR M + N VT++T+
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 429 LSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDL 488
+ + ++ +++ FKK +V D + D+
Sbjct: 437 IQGLFQAGDCDMAQKI----------------------------FKK--MVSDGVPP-DI 465
Query: 489 ISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQ 548
I+++ L+ G +G + AL F+ + K+ M+PD T+ + AG V G +LF
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCS 525
Query: 549 MVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIE---PNEYIWGALLNS 600
+ + ++P V Y ++ R GL +EA+ + R M + PN + L+ +
Sbjct: 526 LSLK-GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRA 579
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 4/185 (2%)
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL 172
+N++I+ G + A +I+ M G PD T ++++ G +V +
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492
Query: 173 ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR----TILSWNTMVSGYAFNHDCV 228
+ ++ N ++ K G++ED LF + ++ ++ + TM+SG+
Sbjct: 493 KSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKE 552
Query: 229 GASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVI 288
A +F+ M+ + PNS T+ +L+ + R G + EL K MR+ G A +++VI
Sbjct: 553 EADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612
Query: 289 SVCAD 293
++ D
Sbjct: 613 NMLHD 617
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 115 bits (288), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/502 (21%), Positives = 216/502 (43%), Gaps = 49/502 (9%)
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL 172
+N ++ A FE I + M+ G D +T + I SL V +
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 173 ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASR 232
+LG+ + ++ L+ Y R+ DA L D M + GY
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM----------VEMGY----------- 184
Query: 233 IFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCA 292
+P++ T+T+L+ E + L M RGC+ V++
Sbjct: 185 ----------KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLC 234
Query: 293 DVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE---- 348
++D + + + KG E + + N +ID K+KH+ DA N+F ++ NK +
Sbjct: 235 KRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVF 294
Query: 349 SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLE 408
++++LIS G +A +L + + + + PNV+++SA+I F +G E+ +
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIE-----RKINPNVVTFSALIDAFVKEGKLVEAEK 349
Query: 409 LFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYM 468
L+ M + P+ T+S++++ L+ + + + N++ + LI +
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
Query: 469 KCGDFKKGHLVFDNIEGRDLI----SWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHV 524
K ++G +F + R L+ ++ +LI G+ DNA F +M+ G+ P+ +
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 525 TFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRN 584
T+ L G +A +F + R +EP + Y +++ + +AG +++ ++ N
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRS-TMEPDIYTYNIMIEGMCKAGKVEDGWELFCN 528
Query: 585 MP---IEPNEYIWGALLNS-CR 602
+ + PN + +++ CR
Sbjct: 529 LSLKGVSPNVIAYNTMISGFCR 550
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 157/328 (47%), Gaps = 13/328 (3%)
Query: 110 IPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHC 169
+ ++N+II + + + A+ ++ M G PD FT +I + G S +
Sbjct: 258 VVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 317
Query: 170 HALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTI----LSWNTMVSGYAFNH 225
+E ++ + L+ + K G++ +A +L+D M R+I +++++++G+ +
Sbjct: 318 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 377
Query: 226 DCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALA 285
A +F+ M +D PN VT+++L+ + +E +ELF+ M RG +
Sbjct: 378 RLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYT 437
Query: 286 VVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK 345
+I + D ++ + ++ G + N L+D K+ L A VF ++
Sbjct: 438 TLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS 497
Query: 346 NLE----SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKG 401
+E ++N +I ++G E+ + L SL G + PNVI+++ +ISGF KG
Sbjct: 498 TMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL--SLKG---VSPNVIAYNTMISGFCRKG 552
Query: 402 CGEESLELFRRMQLAKVKPNCVTFSTVL 429
EE+ L ++M+ PN T++T++
Sbjct: 553 SKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 101/517 (19%), Positives = 218/517 (42%), Gaps = 29/517 (5%)
Query: 45 DFFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPF 104
+ I+L +Q TL + L++ +I + + + +A+ A+ + + +
Sbjct: 100 ELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVT---- 155
Query: 105 ERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLC 164
+S++ A+ + M + G+ PD FT +I +S
Sbjct: 156 --------LSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEA 207
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTI----LSWNTMVSG 220
+ ++ G + L +V K G ++ A L M I + +NT++ G
Sbjct: 208 VALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 267
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEIS 280
A +F M+ + RP+ T++SL+S G + + L M R +
Sbjct: 268 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFF 340
+ +I ++ + +++ +IK + +F ++LI+ + H L +A ++F
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 387
Query: 341 DIKNK----NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISG 396
+ +K N+ +++ LI + ++ EE + ++ + + L N ++++ +I G
Sbjct: 388 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ-----RGLVGNTVTYTTLIHG 442
Query: 397 FASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDN 456
F + + +F++M V PN +T++ +L + L + Y R+ M+ +
Sbjct: 443 FFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPD 502
Query: 457 ILVGNGLINMYMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFD 512
I N +I K G + G +F N+ + ++I++N++ISG+ G + A +
Sbjct: 503 IYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLK 562
Query: 513 EMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQM 549
+M + G P+ T+ T + A G A L +M
Sbjct: 563 KMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/412 (20%), Positives = 171/412 (41%), Gaps = 53/412 (12%)
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREI 303
P+ V + LLS+ + ++ + L + M+T G ++ I+ ++ + +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 304 HGYVIKGGYEDYLFVKNALIDTYRKHKHLGDA-----------------------HNVFF 340
++K GYE + ++L++ Y K + DA H +F
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 341 DIK----------------NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLR 384
K +L ++ +++ + G + A ++L ++EK +
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKG-----KIE 255
Query: 385 PNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGREL 444
+V+ ++ +I G +++L LF M ++P+ T+S+++S + L
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 445 HGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGM 500
+ ++ N++ + LI+ ++K G + ++D + R D+ +++SLI+G+ M
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 501 HGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVE 560
H D A F+ MI P+ VT+ T + A V G LF +M + + TV
Sbjct: 376 HDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 435
Query: 561 HYACLVDLLGRAGLLQEANDIVRNM---PIEPNEYIWGALLNS-CRTHKDTK 608
Y L+ +A A + + M + PN + LL+ C+ K K
Sbjct: 436 -YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAK 486
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 107/246 (43%), Gaps = 13/246 (5%)
Query: 57 LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSI 116
L +A+ + I + + LI + + V ++F + L + N++
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGL----VGNTV 434
Query: 117 IRANVSHGYFEF-----AIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHA 171
+ HG+F+ A ++ M G P+ T ++++ G + +V +
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494
Query: 172 LELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR----TILSWNTMVSGYAFNHDC 227
++ N ++ K G++ED +LF + ++ ++++NTM+SG+
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554
Query: 228 VGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVV 287
A + K+M+ + PNS T+ +L+ + R G + + EL K MR+ G A + +V
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614
Query: 288 ISVCAD 293
++ D
Sbjct: 615 TNMLHD 620
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/485 (22%), Positives = 210/485 (43%), Gaps = 59/485 (12%)
Query: 174 LGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPV----RTILSWNTMVSGYAFNHDCVG 229
LG ++L+ N L+ + + ++ A L M +I++ +++++GY
Sbjct: 39 LGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 98
Query: 230 ASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVIS 289
A + +M +RP+++T+T+L+ E + L M RGC+ + VV++
Sbjct: 99 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVN 158
Query: 290 VCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLES 349
++D + + + E + + N +ID+ K++H+ DA N+F +++ K +
Sbjct: 159 GLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI-- 216
Query: 350 WNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLEL 409
RPNV+++S++IS S G ++ +L
Sbjct: 217 ----------------------------------RPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 410 FRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMK 469
M K+ PN VTF+ ++ + +LH ++ +D +I N LIN +
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCM 302
Query: 470 CGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVT 525
K +F+ + + DL ++N+LI G+ ++ F EM G+ D VT
Sbjct: 303 HDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT 362
Query: 526 FVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEA---NDIV 582
+ T + H G + +F QMV + + P + Y+ L+D L G L++A D +
Sbjct: 363 YTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYM 421
Query: 583 RNMPIEPNEYIWGALLNS-CRTHKDTK--------IVEETASQILTLNSQITG--SFMLL 631
+ I+ + YI+ ++ C+ K ++ ++T N+ I+G S LL
Sbjct: 422 QKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLL 481
Query: 632 SNIYA 636
YA
Sbjct: 482 QEAYA 486
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 188/434 (43%), Gaps = 19/434 (4%)
Query: 129 AIEIYVGMRKFGFFPDGFTLPLIIEAC-SHLGSSSLCRIVHCHALELGFRNHLHVVNKLV 187
A+ + M + G+ PD T +I H +S +V ++ G + +L +V
Sbjct: 99 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD-RMVQRGCQPNLVTYGVVV 157
Query: 188 GMYGKLGRMEDACQLFDGMPVRTI----LSWNTMVSGYAFNHDCVGASRIFKRMELEDWR 243
K G ++ A L + M I + +NT++ A +FK ME + R
Sbjct: 158 NGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 217
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREI 303
PN VT++SL+S G + + +L M + + +I + + ++
Sbjct: 218 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 277
Query: 304 HGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKN----LESWNALISSYAE 359
H +IK + +F N+LI+ + H L A +F + +K+ L+++N LI + +
Sbjct: 278 HDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCK 337
Query: 360 SGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVK 419
S E+ + ++ H+ L + ++++ +I G G + + ++F++M V
Sbjct: 338 SKRVEDGTELFREMS-----HRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVP 392
Query: 420 PNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLV 479
P+ +T+S +L L E+ Y ++ + +I + +I K G G +
Sbjct: 393 PDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDL 452
Query: 480 FDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSH 535
F ++ + +++++N++ISG L A +M + G PD T+ T + A
Sbjct: 453 FCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLR 512
Query: 536 AGLVAAGRNLFYQM 549
G AA L +M
Sbjct: 513 DGDKAASAELIREM 526
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 158/349 (45%), Gaps = 14/349 (4%)
Query: 90 GSVSHAQKVFNAVPFERLD-HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTL 148
G + A + N + +++ + ++N+II + + + + A+ ++ M G P+ T
Sbjct: 164 GDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 223
Query: 149 PLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPV 208
+I G S + +E +L N L+ + K G+ +A +L D M
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 209 RTI----LSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDE 264
R+I ++N++++G+ + A ++F+ M +D P+ T+ +L+ + ++
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVED 343
Query: 265 TLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALID 324
ELF+ M RG +I + D ++++ ++ G + + L+D
Sbjct: 344 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 403
Query: 325 TYRKHKHLGDAHNVFFDIKNKNLE----SWNALISSYAESGLCEEAHAVLLQLEKSLDGH 380
+ L A VF ++ ++ + +I ++G ++ + L SL G
Sbjct: 404 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL--SLKG- 460
Query: 381 QPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVL 429
++PNV++++ +ISG SK +E+ L ++M+ P+ T++T++
Sbjct: 461 --VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLI 507
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 152/345 (44%), Gaps = 51/345 (14%)
Query: 80 AKLIALYARFGSVSHAQKVFNAVPFERLD-HIPLWNSIIRANVSHGYFEFAIEIYVGMRK 138
+ LI+ +G S A ++ + + ++++ ++ +N++I A V G F A +++ M K
Sbjct: 224 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIK 283
Query: 139 FGFFPDGFTLPLIIEA-CSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRME 197
PD FT +I C H ++ + F + L N L+ + K R+E
Sbjct: 284 RSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD-LDTYNTLIKGFCKSKRVE 342
Query: 198 DACQLFDGMPVRTIL----SWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLL 253
D +LF M R ++ ++ T++ G + DC A ++FK+M + P+ +T++ LL
Sbjct: 343 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Query: 254 SSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYE 313
G ++ LE+F M+ EI +
Sbjct: 403 DGLCNNGKLEKALEVFDYMQKS--EIKLD------------------------------- 429
Query: 314 DYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK----NLESWNALISSYAESGLCEEAHAV 369
+++ +I+ K + D ++F + K N+ ++N +IS L +EA+A+
Sbjct: 430 --IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 487
Query: 370 LLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQ 414
L ++++ DG PL P+ +++ +I G S EL R M+
Sbjct: 488 LKKMKE--DG--PL-PDSGTYNTLIRAHLRDGDKAASAELIREMR 527
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 103/228 (45%), Gaps = 10/228 (4%)
Query: 381 QPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNL 440
+PL P++ ++ ++S A + + L +MQ + N T++ +++ + ++L
Sbjct: 5 RPL-PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISL 63
Query: 441 GRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGR----DLISWNSLIS 496
L G ++ + +I+ + L+N Y + D + D I++ +LI
Sbjct: 64 ALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIH 123
Query: 497 GYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIE 556
G +H A+ D M++ G +P+ VT+ ++ G + NL +M +IE
Sbjct: 124 GLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIE 182
Query: 557 PTVEHYACLVDLLGRAGLLQEANDIVRNMP---IEPNEYIWGALLNSC 601
V + ++D L + + +A ++ + M I PN + +L+ SC
Sbjct: 183 ADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI-SC 229
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 110/489 (22%), Positives = 223/489 (45%), Gaps = 24/489 (4%)
Query: 129 AIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVG 188
AI ++ M K FP ++ A + + L + LG ++L+ + +
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFIN 118
Query: 189 MYGKLGRMEDACQLFDGMPV----RTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRP 244
+ + ++ A + M +I++ N++++G+ + A + +M ++P
Sbjct: 119 YFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQP 178
Query: 245 NSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIH 304
++VT+T+L+ + E + L + M +GC+ VI+ E D + +
Sbjct: 179 DTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL 238
Query: 305 GYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE----SWNALISSYAES 360
+ KG E + + N +ID K+KH+ DA ++F ++ K ++ ++N LIS
Sbjct: 239 NKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNY 298
Query: 361 GLCEEAHAVLLQ-LEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAK-V 418
G +A +L LEK+++ P+++ ++A+I F +G E+ +L+ M +K
Sbjct: 299 GRWSDASRLLSDMLEKNIN------PDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHC 352
Query: 419 KPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHL 478
P+ V ++T++ + + G E+ + + N + LI+ + + D +
Sbjct: 353 FPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 412
Query: 479 VFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACS 534
VF + D++++N L+ G +G + AL F+ M K MK D VT+ T + A
Sbjct: 413 VFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALC 472
Query: 535 HAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIE---PNE 591
AG V G +LF + + ++P V Y ++ R GL +EA+ + M + PN
Sbjct: 473 KAGKVEDGWDLFCSLSLK-GVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNS 531
Query: 592 YIWGALLNS 600
+ L+ +
Sbjct: 532 GTYNTLIRA 540
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 96/221 (43%), Gaps = 13/221 (5%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEF-----AIEIYVGM 136
LI + ++ V +VF + L + N++ + HG+F+ A ++ M
Sbjct: 362 LIKGFCKYKRVEEGMEVFREMSQRGL----VGNTVTYTTLIHGFFQARDCDNAQMVFKQM 417
Query: 137 RKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRM 196
G PD T ++++ + G+ +V + + + + ++ K G++
Sbjct: 418 VSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKV 477
Query: 197 EDACQLFDGMPVR----TILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSL 252
ED LF + ++ ++++ TM+SG+ A +F M+ + PNS T+ +L
Sbjct: 478 EDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTL 537
Query: 253 LSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCAD 293
+ + R G + EL K MR+ G A +V ++ D
Sbjct: 538 IRARLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNMLHD 578
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 113 bits (282), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 177/371 (47%), Gaps = 14/371 (3%)
Query: 211 ILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFK 270
I++ N++++G+ + A + +M ++P++VT+T+L+ E + L
Sbjct: 148 IVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALID 207
Query: 271 LMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHK 330
M RGC+ V++ + D + + + E + + + +ID+ K++
Sbjct: 208 RMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYR 267
Query: 331 HLGDAHNVFFDIKNK----NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPN 386
H DA N+F +++NK N+ ++++LIS G +A +L + + + + PN
Sbjct: 268 HEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE-----RKINPN 322
Query: 387 VISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHG 446
++++SA+I F KG ++ +L+ M + PN T+S++++ L L +++
Sbjct: 323 LVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Query: 447 YAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDL----ISWNSLISGYGMHG 502
+R N++ N LIN + K KG +F + R L +++ +LI G+
Sbjct: 383 LMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQAR 442
Query: 503 LGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHY 562
DNA F +M+ G+ P+ +T+ L G +A +F + R +EP + Y
Sbjct: 443 DCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS-TMEPDIYTY 501
Query: 563 ACLVDLLGRAG 573
+++ + +AG
Sbjct: 502 NIMIEGMCKAG 512
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/361 (19%), Positives = 152/361 (42%), Gaps = 15/361 (4%)
Query: 129 AIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVG 188
A+ + M + G+ PD T +I +S + ++ G + L +V
Sbjct: 167 AVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVN 226
Query: 189 MYGKLGRMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCV-----GASRIFKRMELEDWR 243
K G + A L + M I N ++ + C A +F ME + R
Sbjct: 227 GLCKRGDTDLALNLLNKMEAAKI-EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREI 303
PN +T++SL+S G + + L M R + + +I ++ ++ ++
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Query: 304 HGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK----NLESWNALISSYAE 359
+ +IK + +F ++LI+ + LG+A + + K N+ ++N LI+ + +
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Query: 360 SGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVK 419
+ ++ + ++ + + L N ++++ +I GF + + +F++M V
Sbjct: 406 AKRVDKGMELFREMSQ-----RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVH 460
Query: 420 PNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLV 479
PN +T++ +L + L + Y R+ M+ +I N +I K G +K G +
Sbjct: 461 PNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMGGIY 520
Query: 480 F 480
F
Sbjct: 521 F 521
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 125/268 (46%), Gaps = 27/268 (10%)
Query: 346 NLESWNALISSYAESGLCEEAHAVLLQLEKSLD-GHQPLRPNVISWSAVISGFASKGCGE 404
NL ++N LI+ + C L L K + G++P ++++ +++++GF
Sbjct: 112 NLYTYNILINCFCR---CSRLSLALALLGKMMKLGYEP---DIVTLNSLLNGFCHGNRIS 165
Query: 405 ESLELFRRMQLAKVKPNCVTFSTVL------SVCAELAALNLGRELHGYAVRNLMDDNIL 458
+++ L +M KP+ VTF+T++ + +E AL + R D +
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVAL-----IDRMVQRGCQPDLVT 220
Query: 459 VGNGLINMYMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEM 514
G ++N K GD + + +E +++ ++++I + D+AL F EM
Sbjct: 221 YG-AVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279
Query: 515 IKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGL 574
G++P+ +T+ + +S + G + L M+ E +I P + ++ L+D + G
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMI-ERKINPNLVTFSALIDAFVKKGK 338
Query: 575 LQEANDIVRNM---PIEPNEYIWGALLN 599
L +A + M I+PN + + +L+N
Sbjct: 339 LVKAEKLYEEMIKRSIDPNIFTYSSLIN 366
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 111 bits (278), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/520 (20%), Positives = 225/520 (43%), Gaps = 53/520 (10%)
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL 172
+ I+R + + AI ++ GM K P F ++ A + + L +
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 173 ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPV----RTILSWNTMVSGYAFNHDCV 228
LG ++L+ N L+ + + ++ A L M +I++ +++++GY
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 229 GASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVI 288
A + +M +RP+++T+T+L+ E + L M RGC+ + VV+
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 289 SVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK--- 345
+ ++D + + + E + + + +ID+ K++H DA N+F +++NK
Sbjct: 233 NGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 292
Query: 346 --------------NLESW----------------------NALISSYAESGLCEEAHAV 369
N E W NALI ++ + G EA +
Sbjct: 293 PNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKL 352
Query: 370 LLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVL 429
++ K + + P++ ++S++I+GF +E+ +F M PN VT++T++
Sbjct: 353 YDEMIK-----RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLI 407
Query: 430 SVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGR--- 486
+ + ++ G EL + + N + LI+ + + D +VF +
Sbjct: 408 NGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH 467
Query: 487 -DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNL 545
+++++N+L+ G +G + A+ F+ + ++ M+P T+ + AG V G +L
Sbjct: 468 PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDL 527
Query: 546 FYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM 585
F + + ++P V Y ++ R GL +EA+ + R M
Sbjct: 528 FCSLSLK-GVKPDVIIYNTMISGFCRKGLKEEADALFRKM 566
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 163/335 (48%), Gaps = 16/335 (4%)
Query: 90 GSVSHAQKVFNAVPFERLD-HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTL 148
G + A + N + +++ ++ +++++I + + + + A+ ++ M G P+ T
Sbjct: 239 GDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITY 298
Query: 149 PLIIEA-CSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMP 207
+I C++ S R++ +E ++ N L+ + K G++ +A +L+D M
Sbjct: 299 SSLISCLCNYERWSDASRLLS-DMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMI 357
Query: 208 VRTI----LSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYD 263
R+I +++++++G+ + A +F+ M +D PN VT+ +L++ + D
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 264 ETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALI 323
E +ELF+ M RG + +I + D ++ + ++ G + N L+
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 324 DTYRKHKHLGDAHNVFFDIKNKNLE----SWNALISSYAESGLCEEAHAVLLQLEKSLDG 379
D K+ L A VF ++ +E ++N +I ++G E+ + L SL G
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL--SLKG 535
Query: 380 HQPLRPNVISWSAVISGFASKGCGEESLELFRRMQ 414
++P+VI ++ +ISGF KG EE+ LFR+M+
Sbjct: 536 ---VKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Score = 85.9 bits (211), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 106/487 (21%), Positives = 200/487 (41%), Gaps = 38/487 (7%)
Query: 195 RMEDACQLFDGM----PVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWT 250
+++DA LF GM P+ +I +N ++S A + ++M+ N T+
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 251 SLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKG 310
L++ R L L M G E S L+ +++ + + + +++
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 311 GYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK----NLESWNALISSYAESGLCEEA 366
GY LI H +A + + + NL ++ +++ + G + A
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLA 244
Query: 367 HAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFS 426
+L ++E + + NV+ +S VI +++L LF M+ V+PN +T+S
Sbjct: 245 FNLLNKMEAA-----KIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYS 299
Query: 427 TVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGR 486
+++S + L + ++ N++ N LI+ ++K G + ++D + R
Sbjct: 300 SLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR 359
Query: 487 ----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAG 542
D+ +++SLI+G+ MH D A F+ MI P+ VT+ T ++ A + G
Sbjct: 360 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEG 419
Query: 543 RNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM---PIEPNEYIWGALLN 599
LF +M + + TV Y L+ +A A + + M + PN + LL+
Sbjct: 420 VELFREMSQRGLVGNTVT-YTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 478
Query: 600 S-CRTHKDTKIV--------EETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRIS 650
C+ K K + + I T N I G G+ ED + S
Sbjct: 479 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEG--------MCKAGKVEDGWDLFCS 530
Query: 651 AKKKGLK 657
KG+K
Sbjct: 531 LSLKGVK 537
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 97/461 (21%), Positives = 187/461 (40%), Gaps = 54/461 (11%)
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL 172
+N +I A+ + M K G+ P TL ++ H S + +
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 173 ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR----TILSWNTMVSGYAFNHDCV 228
E+G+R L+ + +A L D M R ++++ +V+G D
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDID 242
Query: 229 GASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVI 288
A + +ME N V +++++ S + D+ L LF M +G + + +I
Sbjct: 243 LAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLI 302
Query: 289 SVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE 348
S + + + +I+ + NALID + K L +A ++ ++ ++++
Sbjct: 303 SCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID 362
Query: 349 ----SWNALISSYAESGLCEEA-HAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
++++LI+ + +EA H L + K PNV++++ +I+GF
Sbjct: 363 PDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC------FPNVVTYNTLINGFCKAKRI 416
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
+E +ELFR M + N VT++T++ + + + + V + + NI+ N L
Sbjct: 417 DEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTL 476
Query: 464 INMYMKCGDFKKGHLVFD----------------NIEGR--------------------- 486
++ K G +K +VF+ IEG
Sbjct: 477 LDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 536
Query: 487 --DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVT 525
D+I +N++ISG+ GL + A F +M + G PD T
Sbjct: 537 KPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 109 bits (273), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 113/546 (20%), Positives = 229/546 (41%), Gaps = 59/546 (10%)
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL 172
+ I+R + + AI ++ GM K P ++ A + + + +
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 173 ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPV----RTILSWNTMVSGYAFNHDCV 228
L + L+ N L+ + + ++ A L M +I++ +++++GY
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 229 GASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVI 288
A + +M +RP+++T+T+L+ E + L M RGC+ + VV+
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 289 SVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE 348
+ + D + + + E + + N +ID+ K++H+ DA N+F +++ K +
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGI- 291
Query: 349 SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLE 408
RPNV+++S++IS S G ++ +
Sbjct: 292 -----------------------------------RPNVVTYSSLISCLCSYGRWSDASQ 316
Query: 409 LFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYM 468
L M K+ PN VTF+ ++ + +L+ ++ +D +I N L+N +
Sbjct: 317 LLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFC 376
Query: 469 KCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHV 524
K +F+ + + D++++N+LI G+ ++ F EM G+ D V
Sbjct: 377 MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTV 436
Query: 525 TFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEA---NDI 581
T+ T + H G + +F QMV + + P + Y+ L+D L G L++A D
Sbjct: 437 TYTTLIQGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDY 495
Query: 582 VRNMPIEPNEYIWGALLNS-CRTHKDTK--------IVEETASQILTLNSQITG--SFML 630
++ I+ + YI+ ++ C+ K ++ ++T N+ I+G S L
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 555
Query: 631 LSNIYA 636
L YA
Sbjct: 556 LQEAYA 561
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/485 (20%), Positives = 201/485 (41%), Gaps = 18/485 (3%)
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL 172
+N +I A+ + M K G+ P TL ++ H S + +
Sbjct: 123 YNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMV 182
Query: 173 ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR----TILSWNTMVSGYAFNHDCV 228
E+G+R L+ + +A L D M R ++++ +V+G D
Sbjct: 183 EMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTD 242
Query: 229 GASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVI 288
A + +ME + V + +++ S + D+ L LFK M T+G + + +I
Sbjct: 243 LALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLI 302
Query: 289 SVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE 348
S + ++ +I+ L NALID + K +A ++ D+ ++++
Sbjct: 303 SCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID 362
Query: 349 ----SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGE 404
++N+L++ + ++A + + S D P+V++++ +I GF E
Sbjct: 363 PDIFTYNSLVNGFCMHDRLDKAKQ-MFEFMVSKDCF----PDVVTYNTLIKGFCKSKRVE 417
Query: 405 ESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLI 464
+ ELFR M + + VT++T++ + +++ V + + +I+ + L+
Sbjct: 418 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 465 NMYMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMK 520
+ G +K VFD ++ D+ + ++I G G D+ F + G+K
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVK 537
Query: 521 PDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAND 580
P+ VT+ T +S L+ L +M +E P Y L+ R G + +
Sbjct: 538 PNVVTYNTMISGLCSKRLLQEAYALLKKM-KEDGPLPNSGTYNTLIRAHLRDGDKAASAE 596
Query: 581 IVRNM 585
++R M
Sbjct: 597 LIREM 601
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/349 (20%), Positives = 159/349 (45%), Gaps = 14/349 (4%)
Query: 90 GSVSHAQKVFNAVPFERLD-HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTL 148
G A + N + +++ + ++N+II + + + + A+ ++ M G P+ T
Sbjct: 239 GDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTY 298
Query: 149 PLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPV 208
+I G S + +E +L N L+ + K G+ +A +L+D M
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 209 RTI----LSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDE 264
R+I ++N++V+G+ + A ++F+ M +D P+ VT+ +L+ + ++
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVED 418
Query: 265 TLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALID 324
ELF+ M RG +I + D ++++ ++ G + + L+D
Sbjct: 419 GTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLD 478
Query: 325 TYRKHKHLGDAHNVFFDIKNKNLE----SWNALISSYAESGLCEEAHAVLLQLEKSLDGH 380
+ L A VF ++ ++ + +I ++G ++ + L SL G
Sbjct: 479 GLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL--SLKG- 535
Query: 381 QPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVL 429
++PNV++++ +ISG SK +E+ L ++M+ PN T++T++
Sbjct: 536 --VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLI 582
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/359 (22%), Positives = 156/359 (43%), Gaps = 51/359 (14%)
Query: 80 AKLIALYARFGSVSHAQKVFNAVPFERLD-HIPLWNSIIRANVSHGYFEFAIEIYVGMRK 138
+ LI+ +G S A ++ + + ++++ ++ +N++I A V G F A ++Y M K
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIK 358
Query: 139 FGFFPDGFTLPLIIEA-CSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRME 197
PD FT ++ C H ++ + F + + N L+ + K R+E
Sbjct: 359 RSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVV-TYNTLIKGFCKSKRVE 417
Query: 198 DACQLFDGMPVRTIL----SWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLL 253
D +LF M R ++ ++ T++ G + DC A ++FK+M + P+ +T++ LL
Sbjct: 418 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 254 SSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYE 313
G ++ LE+F M+ EI +
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKS--EIKLD------------------------------- 504
Query: 314 DYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK----NLESWNALISSYAESGLCEEAHAV 369
+++ +I+ K + D ++F + K N+ ++N +IS L +EA+A+
Sbjct: 505 --IYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYAL 562
Query: 370 LLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTV 428
L ++++ DG PL PN +++ +I G S EL R M+ + + T V
Sbjct: 563 LKKMKE--DG--PL-PNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/236 (19%), Positives = 102/236 (43%), Gaps = 9/236 (3%)
Query: 57 LQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERL--DHIPLWN 114
L +A+Q+ + + LI + + V ++F + L D + +
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVT-YT 439
Query: 115 SIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALEL 174
++I+ G + A +++ M G PD T ++++ + G V + +
Sbjct: 440 TLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 499
Query: 175 GFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR----TILSWNTMVSGYAFNHDCVGA 230
+ +++ ++ K G+++D LF + ++ ++++NTM+SG A
Sbjct: 500 EIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEA 559
Query: 231 SRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
+ K+M+ + PNS T+ +L+ +H R G + EL + MR+ C +A +
Sbjct: 560 YALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRS--CRFVGDASTI 613
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 111/523 (21%), Positives = 221/523 (42%), Gaps = 30/523 (5%)
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL 172
+N ++ A FE I + M+ G D +T + I SL V +
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 173 ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMP----VRTILSWNTMVSGYAFNHDCV 228
+LG+ + ++ L+ Y R+ DA L D M ++ T++ G ++
Sbjct: 146 KLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKAS 205
Query: 229 GASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVI 288
A + +M +P+ VT+ ++++ + G D L L M + + +I
Sbjct: 206 EAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTII 265
Query: 289 SVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK----N 344
V+ + ++ + G + N+LI+ + DA + ++ N
Sbjct: 266 DSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKIN 325
Query: 345 KNLESWNALISSYAESGLCEEAHAVLLQL-EKSLDGHQPLRPNVISWSAVISGFASKGCG 403
N+ ++NALI ++ + G EA + ++ ++S+D P+ I+++ +I+GF
Sbjct: 326 PNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID------PDTITYNLLINGFCMHNRL 379
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
+E+ ++F+ M PN T++T+++ + + G EL + + N + +
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 464 INMYMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGM 519
I + + GD +VF + D+++++ L+ G +G D AL F + K+ M
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 520 KPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAN 579
+ + + T + AG V +LF + I+P V Y ++ L LLQEA+
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVGEAWDLFCSL----SIKPDVVTYNTMISGLCSKRLLQEAD 555
Query: 580 DIVRNMPIE---PNEYIWGAL----LNSCRTHKDTKIVEETAS 615
D+ R M + PN + L L C ++++E S
Sbjct: 556 DLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRS 598
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/369 (21%), Positives = 171/369 (46%), Gaps = 21/369 (5%)
Query: 90 GSVSHAQKVFNAVPFERLD-HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTL 148
G + A + N + R+ ++ ++N+II + + + E A++++ M G P+ T
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 149 PLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPV 208
+I + G S + + LE ++ N L+ + K G++ +A +L + M
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 209 RTI----LSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDE 264
R+I +++N +++G+ ++ A ++FK M +D PN T+ +L++ +C ++
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 265 TLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALID 324
+ELF+ M RG + +I + D ++ + ++ + + L+
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLH 476
Query: 325 TYRKHKHLGDAHNVFFDIKNKNLE----SWNALISSYAESGLCEEAHAVLLQLEKSLDGH 380
+ L A +F ++ +E +N +I ++G EA + L
Sbjct: 477 GLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLS------ 530
Query: 381 QPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSV----CAELA 436
++P+V++++ +ISG SK +E+ +LFR+M+ PN T++T++ C A
Sbjct: 531 --IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAA 588
Query: 437 ALNLGRELH 445
+ L +E+
Sbjct: 589 SAELIKEMR 597
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/355 (20%), Positives = 165/355 (46%), Gaps = 24/355 (6%)
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREI 303
P+ V + LLS+ + ++ + L + M+T G ++ I+ ++ + +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 304 HGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE----SWNALISSYAE 359
++K GYE + ++L++ Y K + DA + + + ++ LI
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 360 SGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVK 419
EA A++ Q+ + + +P+++++ V++G +G + +L L +M+ A++K
Sbjct: 201 HNKASEAVALVDQMVQ-----RGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIK 255
Query: 420 PNCVTFSTVL-SVCAEL---AALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKK 475
N V F+T++ S+C A++L E+ +R N++ N LIN G +
Sbjct: 256 ANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIR----PNVVTYNSLINCLCNYGRWSD 311
Query: 476 GHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALS 531
+ N+ + +++++N+LI + G A +EMI+ + PD +T+ ++
Sbjct: 312 ASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLIN 371
Query: 532 A-CSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM 585
C H L A + +F MV + + P ++ Y L++ + +++ ++ R M
Sbjct: 372 GFCMHNRLDEA-KQMFKFMVSKDCL-PNIQTYNTLINGFCKCKRVEDGVELFREM 424
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 101/504 (20%), Positives = 219/504 (43%), Gaps = 22/504 (4%)
Query: 110 IPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHC 169
I +N+++ + G + ++Y+ M + P+ +T ++ LG+
Sbjct: 183 IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVS 242
Query: 170 HALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPV----RTILSWNTMVSGYAFNH 225
+E G L+ Y + ++ A ++F+ MP+ R +++ ++ G
Sbjct: 243 KIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVAR 302
Query: 226 DCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALA 285
A +F +M+ ++ P T+T L+ S E L L K M G + +
Sbjct: 303 RIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYT 362
Query: 286 VVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK 345
V+I + +++RE+ G +++ G + NALI+ Y K + DA +V ++++
Sbjct: 363 VLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR 422
Query: 346 ----NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKG 401
N ++N LI Y +S + H + L K L+ + + P+V++++++I G G
Sbjct: 423 KLSPNTRTYNELIKGYCKSNV----HKAMGVLNKMLE--RKVLPDVVTYNSLIDGQCRSG 476
Query: 402 CGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGN 461
+ + L M + P+ T+++++ + + +L + ++ N+++
Sbjct: 477 NFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 462 GLINMYMKCGDFKKGHLVFDNIEGRDL----ISWNSLISGYGMHGLGDNALTTFDEMIKA 517
LI+ Y K G + HL+ + + ++ +++N+LI G G A ++M+K
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKI 596
Query: 518 GMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQE 577
G++P T + G + F QM+ +P Y + R G L +
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSS-GTKPDAHTYTTFIQTYCREGRLLD 655
Query: 578 ANDIVRNMP---IEPNEYIWGALL 598
A D++ M + P+ + + +L+
Sbjct: 656 AEDMMAKMRENGVSPDLFTYSSLI 679
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 95/438 (21%), Positives = 197/438 (44%), Gaps = 29/438 (6%)
Query: 249 WTSLLSSHKRCGLYDETLELF-KLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYV 307
+ +LL+S R GL DE +++ +++ + C +V C + V+ + + +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCK-LGNVEEANQYVSKI 244
Query: 308 IKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAH 367
++ G + F +LI Y + K L A VF ++ K N + ++ GLC
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRR-NEVAYTHLIHGLC---- 299
Query: 368 AVLLQLEKSLDGHQPLR-----PNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNC 422
V ++++++D ++ P V +++ +I E+L L + M+ +KPN
Sbjct: 300 -VARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNI 358
Query: 423 VTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDN 482
T++ ++ REL G + + N++ N LIN Y K G + V +
Sbjct: 359 HTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVEL 418
Query: 483 IEGRDLI----SWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGL 538
+E R L ++N LI GY + A+ ++M++ + PD VT+ + + +G
Sbjct: 419 MESRKLSPNTRTYNELIKGYCKSNV-HKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGN 477
Query: 539 VAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMP---IEPNEYIWG 595
+ L ++ + + P Y ++D L ++ ++EA D+ ++ + PN ++
Sbjct: 478 FDSAYRLL-SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYT 536
Query: 596 ALLNS-CRTHKDTK---IVEETASQILTLNSQITGSFMLLSNIYAANGRWEDSARVRISA 651
AL++ C+ K + ++E+ S+ NS +F L + A+G+ +++ +
Sbjct: 537 ALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSL---TFNALIHGLCADGKLKEATLLEEKM 593
Query: 652 KKKGLKKTPGQSWIEVRK 669
K GL+ T I + +
Sbjct: 594 VKIGLQPTVSTDTILIHR 611
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 111/486 (22%), Positives = 199/486 (40%), Gaps = 54/486 (11%)
Query: 81 KLIALYARFGSVSHAQKVFNAVPFER--LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRK 138
+LI Y + +V A V N + ER L + +NS+I G F+ A + M
Sbjct: 433 ELIKGYCK-SNVHKAMGVLNKM-LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490
Query: 139 FGFFPDGFTLPLIIEA-CSHLGSSSLCRIVHCHALEL-GFRNHLHVVNKLVGMYGKLGRM 196
G PD +T +I++ C C + +LE G ++ + L+ Y K G++
Sbjct: 491 RGLVPDQWTYTSMIDSLCKSKRVEEACDLFD--SLEQKGVNPNVVMYTALIDGYCKAGKV 548
Query: 197 EDACQLFDGMPVRTIL----SWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSL 252
++A + + M + L ++N ++ G + A+ + ++M +P T T L
Sbjct: 549 DEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTIL 608
Query: 253 LSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGY 312
+ + G +D F+ M + G + A I + + ++ + + G
Sbjct: 609 IHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGV 668
Query: 313 EDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE----SWNALISSY----------A 358
LF ++LI Y A +V +++ E ++ +LI +
Sbjct: 669 SPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGS 728
Query: 359 ESGLCE-----EAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM 413
E LC E V+ LEK ++ + PN S+ +I G G + ++F M
Sbjct: 729 EPELCAMSNMMEFDTVVELLEKMVE--HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHM 786
Query: 414 QLAK-VKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGN--------GLI 464
Q + + P+ + F+ +LS C +L H A + ++DD I VG+ LI
Sbjct: 787 QRNEGISPSELVFNALLSCCCKLKK-------HNEAAK-VVDDMICVGHLPQLESCKVLI 838
Query: 465 NMYMKCGDFKKGHLVFDNIEG----RDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMK 520
K G+ ++G VF N+ D ++W +I G G GL + F+ M K G K
Sbjct: 839 CGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCK 898
Query: 521 PDHVTF 526
T+
Sbjct: 899 FSSQTY 904
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 106/468 (22%), Positives = 201/468 (42%), Gaps = 84/468 (17%)
Query: 210 TILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELF 269
T+ ++ ++ + ++ A + + M PNSV + +L+ S +C +E L+L
Sbjct: 216 TLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLL 275
Query: 270 KLMRTRGCEISAEAL-AVVISVC----------------------------------ADV 294
+ M GC AE V++ +C +
Sbjct: 276 EEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKI 335
Query: 295 VEVDRSRE----------------IHGYVIKGGYED-----------YLFVK-----NAL 322
VD +++ IHG+V G +D Y V N+L
Sbjct: 336 GRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSL 395
Query: 323 IDTYRKHKHLGDAHNVFFDIKNK----NLESWNALISSYAESGLCEEAHAVLLQLEKSLD 378
I Y K +G A V D++NK N+ S+ L+ + + G +EA+ VL ++ S D
Sbjct: 396 IYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM--SAD 453
Query: 379 GHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAAL 438
G L+PN + ++ +IS F + E++E+FR M KP+ TF++++S E+ +
Sbjct: 454 G---LKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEI 510
Query: 439 NLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNI--EGR--DLISWNSL 494
L + + N + N LIN +++ G+ K+ + + + +G D I++NSL
Sbjct: 511 KHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSL 570
Query: 495 ISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFR 554
I G G D A + F++M++ G P +++ ++ +G+V +MV
Sbjct: 571 IKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS 630
Query: 555 IEPTVEHYACLVDLLGRAGLLQEANDIVRNMP---IEPNEYIWGALLN 599
P + + L++ L RAG +++ + R + I P+ + L++
Sbjct: 631 T-PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 130/559 (23%), Positives = 233/559 (41%), Gaps = 101/559 (18%)
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEA---CSHLGSS-SLCRIVH 168
+N ++ VS + A ++ M P FT ++++A + + S+ SL R +
Sbjct: 185 YNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMT 244
Query: 169 CHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGM----PVRTILSWNTMVSGYAFN 224
H G + + L+ K R+ +A QL + M V ++N ++ G
Sbjct: 245 KH----GCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKF 300
Query: 225 HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
A+++ RM + + P+ +T+ L++ + G D +LF I +
Sbjct: 301 DRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFY-------RIPKPEI 353
Query: 285 AVVISVCADVVEVDRSREIHGYVIKGGYED-----------YLFVK-----NALIDTYRK 328
+ ++ IHG+V G +D Y V N+LI Y K
Sbjct: 354 VIFNTL------------IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 401
Query: 329 HKHLGDAHNVFFDIKNK----NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLR 384
+G A V D++NK N+ S+ L+ + + G +EA+ VL ++ S DG L+
Sbjct: 402 EGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM--SADG---LK 456
Query: 385 PNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGREL 444
PN + ++ +IS F + E++E+FR M KP+ TF++++S E+ + L
Sbjct: 457 PNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWL 516
Query: 445 HGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNI--EGR--DLISWNSLISGYGM 500
+ + N + N LIN +++ G+ K+ + + + +G D I++NSLI G
Sbjct: 517 LRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCR 576
Query: 501 HGLGDNALTTFD-----------------------------------EMIKAGMKPDHVT 525
G D A + F+ EM+ G PD VT
Sbjct: 577 AGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVT 636
Query: 526 FVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM 585
F + ++ AG + G +F ++ E I P + L+ L + G + +A ++ +
Sbjct: 637 FNSLINGLCRAGRIEDGLTMFRKLQAE-GIPPDTVTFNTLMSWLCKGGFVYDAC-LLLDE 694
Query: 586 PIE----PNEYIWGALLNS 600
IE PN W LL S
Sbjct: 695 GIEDGFVPNHRTWSILLQS 713
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 86/353 (24%), Positives = 158/353 (44%), Gaps = 19/353 (5%)
Query: 88 RFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGM-RKFGFFPDGF 146
+ G V A+ +F +P I ++N++I V+HG + A + M +G PD
Sbjct: 334 KIGRVDAAKDLFYRIP---KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVC 390
Query: 147 TLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLF--- 203
T +I G L V G + +++ LV + KLG++++A +
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM 450
Query: 204 --DGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGL 261
DG+ T+ +N ++S + H A IF+ M + +P+ T+ SL+S
Sbjct: 451 SADGLKPNTV-GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 262 YDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNA 321
L L + M + G + +I+ E+ +R++ ++ G N+
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNS 569
Query: 322 LIDTYRKHKHLGDAHNVF----FDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSL 377
LI + + A ++F D + S N LI+ SG+ EEA V Q E L
Sbjct: 570 LIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEA--VEFQKEMVL 627
Query: 378 DGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLS 430
G P ++++++++I+G G E+ L +FR++Q + P+ VTF+T++S
Sbjct: 628 RGSTP---DIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMS 677
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 99/494 (20%), Positives = 215/494 (43%), Gaps = 56/494 (11%)
Query: 88 RFGSVSHAQKVFNAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFT 147
+ G V A KVF + + ++ +N +I G + A E+ M+K G FP+ T
Sbjct: 355 KMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRT 414
Query: 148 LPLIIEA-CSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGM 206
+ ++++ C C + ++ + + + + G+ GK+GR++DA ++++ M
Sbjct: 415 VNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL-GKVGRVDDAYKVYEKM 473
Query: 207 ---PVRT-ILSWNTMVSGYAFNH-----------------------------DCV----- 228
RT + + +++ + FNH DC+
Sbjct: 474 LDSDCRTNSIVYTSLIKNF-FNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGE 532
Query: 229 --GASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
+F+ ++ + P++ +++ L+ + G +ET ELF M+ +GC + A +
Sbjct: 533 PEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNI 592
Query: 287 VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKN 346
VI +V+++ ++ + G+E + ++ID K L +A+ +F + K+K
Sbjct: 593 VIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKR 652
Query: 347 LE----SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGC 402
+E +++LI + + G +EA+ +L +L + + L PN+ +W++++
Sbjct: 653 IELNVVIYSSLIDGFGKVGRIDEAYLILEELMQ-----KGLTPNLYTWNSLLDALVKAEE 707
Query: 403 GEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNG 462
E+L F+ M+ K PN VT+ +++ ++ N + M + +
Sbjct: 708 INEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTT 767
Query: 463 LINMYMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAG 518
+I+ K G+ + +FD + D +N++I G +A + F+E + G
Sbjct: 768 MISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRG 827
Query: 519 MKPDHVTFVTALSA 532
+ + T V L
Sbjct: 828 LPIHNKTCVVLLDT 841
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 112/549 (20%), Positives = 219/549 (39%), Gaps = 90/549 (16%)
Query: 136 MRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGR 195
MRKF F P +I A S + S + + ELG+ +H+ L+ + K GR
Sbjct: 159 MRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 196 MEDACQLFDGMPVRT----ILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTS 251
++ A L D M + I+ +N + + A + F +E +P+ VT+TS
Sbjct: 219 VDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTS 278
Query: 252 LLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGG 311
++ + DE +E+F+ + A +I + D + + G
Sbjct: 279 MIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKG 338
Query: 312 YEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK---NLESWNALISSYAESGLCEEAHA 368
+ N ++ RK + +A VF ++K NL ++N LI +G + A
Sbjct: 339 SIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFE 398
Query: 369 VLLQLEKS---------------------LD---------GHQPLRPNVISWSAVISGFA 398
+ ++K+ LD ++ P+ I++ ++I G
Sbjct: 399 LRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLG 458
Query: 399 SKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAV-RNLMDDNI 457
G +++ +++ +M + + N + +++++ N GR+ G+ + +++++ N
Sbjct: 459 KVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIK-----NFFNHGRKEDGHKIYKDMINQNC 513
Query: 458 LVGNGLINMYMKC----GDFKKGHLVFDNIEGR--------------------------- 486
L+N YM C G+ +KG +F+ I+ R
Sbjct: 514 SPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYE 573
Query: 487 ------------DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACS 534
D ++N +I G+ G + A +EM G +P VT+ + + +
Sbjct: 574 LFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLA 633
Query: 535 HAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM---PIEPNE 591
+ LF + + RIE V Y+ L+D G+ G + EA I+ + + PN
Sbjct: 634 KIDRLDEAYMLFEE-AKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNL 692
Query: 592 YIWGALLNS 600
Y W +LL++
Sbjct: 693 YTWNSLLDA 701
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/402 (18%), Positives = 163/402 (40%), Gaps = 60/402 (14%)
Query: 215 NTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRT 274
N + GY D V R FK +RP +T+L+ + D L LF+ M+
Sbjct: 147 NKLREGY----DVVQMMRKFK------FRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQE 196
Query: 275 RGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGD 334
G E + +I A VD + + + + + + N ID++ K +
Sbjct: 197 LGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDM 256
Query: 335 AHNVFFDIKNKNLE---------------------------------------SWNALIS 355
A F +I+ L+ ++N +I
Sbjct: 257 AWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIM 316
Query: 356 SYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQL 415
Y +G +EA++ LL+ +++ + P+VI+++ +++ G +E+L++F M+
Sbjct: 317 GYGSAGKFDEAYS-LLERQRA----KGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK- 370
Query: 416 AKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKK 475
PN T++ ++ + L+ EL + + N+ N +++ K +
Sbjct: 371 KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDE 430
Query: 476 GHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALS 531
+F+ ++ + D I++ SLI G G G D+A +++M+ + + + + + + +
Sbjct: 431 ACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIK 490
Query: 532 ACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAG 573
+ G G ++ M+ + P ++ +D + +AG
Sbjct: 491 NFFNHGRKEDGHKIYKDMINQ-NCSPDLQLLNTYMDCMFKAG 531
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 111/533 (20%), Positives = 214/533 (40%), Gaps = 93/533 (17%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLDHIP----LWNSIIRANVSHGYFEFAIEIYVGMR 137
LI Y + G + +K F + DHI +N++++ G E A + M+
Sbjct: 255 LIDGYCKAG---NPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMK 311
Query: 138 KFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRME 197
GF PD FT ++ + S + V+ A++ G + + + + L+ K G++E
Sbjct: 312 DLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIE 371
Query: 198 DACQLFDGMPVRTILS----WNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLL 253
A ++ + ++ +NTM+ GY D VGA + ME + +P+ + + L+
Sbjct: 372 KAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLI 431
Query: 254 SSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDR-------------- 299
G + + M+ +G S E ++I E D+
Sbjct: 432 RRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM 491
Query: 300 ----------------SREIHGYVIKGGYED-----YLFVKNALIDTYRKHKHLGDAHNV 338
S+ + ++K ED + + N LID + DA
Sbjct: 492 PNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRF 551
Query: 339 FFDIKNK----NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVI 394
++ K NL ++N LI + +G EA +LL++ + + L+P+V +++++I
Sbjct: 552 SKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISR-----KGLKPDVFTYNSLI 606
Query: 395 SGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMD 454
SG+ G + + L+ M+ + +KP T+ ++S+C + + L L G
Sbjct: 607 SGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTK-EGIELTERLFG-------- 657
Query: 455 DNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEM 514
M +K DL+ +N ++ Y +HG + A +M
Sbjct: 658 ----------EMSLK----------------PDLLVYNGVLHCYAVHGDMEKAFNLQKQM 691
Query: 515 IKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQM-VREFRIEPTVEHYACLV 566
I+ + D T+ + + G + R+L +M RE +EP + Y +V
Sbjct: 692 IEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNARE--MEPEADTYNIIV 742
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 118/549 (21%), Positives = 213/549 (38%), Gaps = 82/549 (14%)
Query: 47 FITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFER 106
I+LL + L + ++ + R F LI Y R G + ++ + + E+
Sbjct: 147 MISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEK 206
Query: 107 LD-HIPLWNSIIRANVSHGY-FEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLC 164
+ I +N++I A G +E + ++ MR G PD T ++ AC+ G
Sbjct: 207 ISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEA 266
Query: 165 RIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLF----DGMPVRTILSWNTMVSG 220
+V + G L + LV +GKL R+E C L G + I S+N ++
Sbjct: 267 EMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEA 326
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEIS 280
YA + A +F +M+ PN+ T++ LL+ + G YD+ +LF M++ +
Sbjct: 327 YAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPD 386
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFF 340
A ++I V + GGY + +F
Sbjct: 387 AATYNILIEVFGE----------------GGY-------------------FKEVVTLFH 411
Query: 341 DIKNKN----LESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISG 396
D+ +N +E++ +I + + GL E+A +L + + + P+ +++ VI
Sbjct: 412 DMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTAN-----DIVPSSKAYTGVIEA 466
Query: 397 FASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDN 456
F EE+L F M P+ TF ++L A + + V + + N
Sbjct: 467 FGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRN 526
Query: 457 ILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIK 516
N I Y + G F++ A+ T+ +M K
Sbjct: 527 RDTFNAQIEAYKQGGKFEE-------------------------------AVKTYVDMEK 555
Query: 517 AGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQ 576
+ PD T LS S A LV R F +M + I P++ Y ++ + G+
Sbjct: 556 SRCDPDERTLEAVLSVYSFARLVDECREQFEEM-KASDILPSIMCYCMMLAVYGKTERWD 614
Query: 577 EANDIVRNM 585
+ N+++ M
Sbjct: 615 DVNELLEEM 623
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/374 (24%), Positives = 166/374 (44%), Gaps = 49/374 (13%)
Query: 221 YAFNHDCVGASRIFKRMELEDW-RPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEI 279
+A D + R+FK M+ + W +PN +T ++S R GL D+ LE+F M ++G
Sbjct: 115 FAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGV-- 172
Query: 280 SAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVF 339
SR + Y ALI+ Y ++ + +
Sbjct: 173 --------------------SRSVFSYT-------------ALINAYGRNGRYETSLELL 199
Query: 340 FDIKNKNLE----SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVIS 395
+KN+ + ++N +I++ A GL E LL L + H+ ++P++++++ ++S
Sbjct: 200 DRMKNEKISPSILTYNTVINACARGGLDWEG---LLGLFAEMR-HEGIQPDIVTYNTLLS 255
Query: 396 GFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDD 455
A +G G+E+ +FR M + P+ T+S ++ +L L +L G
Sbjct: 256 ACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLP 315
Query: 456 NILVGNGLINMYMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTF 511
+I N L+ Y K G K+ VF ++ + +++ L++ +G G D+ F
Sbjct: 316 DITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 512 DEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGR 571
EM + PD T+ + G LF+ MV E IEP +E Y ++ G+
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEE-NIEPDMETYEGIIFACGK 434
Query: 572 AGLLQEANDIVRNM 585
GL ++A I++ M
Sbjct: 435 GGLHEDARKILQYM 448
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 87/201 (43%), Gaps = 40/201 (19%)
Query: 390 WSAVISGFASKGCGEESLELFRRMQLAK-VKPNCVTFSTVLSVCAELAALNLGRELHGYA 448
++ V FA +G + SL LF+ MQ KPN ++ ++S+ LGRE
Sbjct: 108 FALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISL--------LGRE----- 154
Query: 449 VRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEG----RDLISWNSLISGYGMHGLG 504
GL++ KC + VFD + R + S+ +LI+ YG +G
Sbjct: 155 -------------GLLD---KCLE------VFDEMPSQGVSRSVFSYTALINAYGRNGRY 192
Query: 505 DNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYAC 564
+ +L D M + P +T+ T ++AC+ GL G + +R I+P + Y
Sbjct: 193 ETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNT 252
Query: 565 LVDLLGRAGLLQEANDIVRNM 585
L+ GL EA + R M
Sbjct: 253 LLSACAIRGLGDEAEMVFRTM 273
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 155/325 (47%), Gaps = 20/325 (6%)
Query: 346 NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEE 405
N+ S+N +I + G +EAH +LL +E L G+ P +VIS+S V++G+ G ++
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLME--LKGYTP---DVISYSTVVNGYCRFGELDK 299
Query: 406 SLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLIN 465
+L M+ +KPN + +++ + + L E +R + + +V LI+
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 466 MYMKCGDFKKGHLVFDNIEGRDL----ISWNSLISGYGMHGLGDNALTTFDEMIKAGMKP 521
+ K GD + F + RD+ +++ ++ISG+ G A F EM G++P
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419
Query: 522 DHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI 581
D VTF ++ AG + + M++ P V Y L+D L + G L AN++
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 582 VRNM---PIEPNEYIWGALLNS-CRT---HKDTKIVEETASQILTLNSQITGSFMLLSNI 634
+ M ++PN + + +++N C++ + K+V E + L + T ++ L +
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD---TVTYTTLMDA 535
Query: 635 YAANGRWEDSARVRISAKKKGLKKT 659
Y +G + + + KGL+ T
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPT 560
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 165/357 (46%), Gaps = 14/357 (3%)
Query: 237 MELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVE 296
MEL+ + P+ ++++++++ + R G D+ +L ++M+ +G + ++ +I + + +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 297 VDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE----SWNA 352
+ + E +I+ G V LID + K + A F+++ ++++ ++ A
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 353 LISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRR 412
+IS + + G EA + ++ + L P+ ++++ +I+G+ G +++ +
Sbjct: 392 IISGFCQIGDMVEAGKLFHEM-----FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH 446
Query: 413 MQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGD 472
M A PN VT++T++ + L+ EL + + NI N ++N K G+
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 473 FKKGHLVFDNIEG----RDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVT 528
++ + E D +++ +L+ Y G D A EM+ G++P VTF
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 529 ALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM 585
++ G++ G L M+ + I P + LV L+ A I ++M
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/435 (20%), Positives = 186/435 (42%), Gaps = 35/435 (8%)
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL 172
+++++ G + ++ M++ G P+ + II LCRI
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSII--------GLLCRICKLAEA 335
Query: 173 ELGFRNHLH--------VVNKLVGMYGKLGRMEDACQLFDGMPVRTI----LSWNTMVSG 220
E F + V L+ + K G + A + F M R I L++ ++SG
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEIS 280
+ D V A ++F M + P+SVT+T L++ + + G + + M GC +
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFF 340
+I ++D + E+ + K G + +F N++++ K ++ +A +
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 341 DIK----NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISG 396
+ + N + ++ L+ +Y +SG ++A +L K + G + L+P +++++ +++G
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL----KEMLG-KGLQPTIVTFNVLMNG 570
Query: 397 FASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELH-GYAVRNLMDD 455
F G E+ +L M + PN TF++++ L ++ R + D
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 456 NILVGNGLINMYMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTF 511
N L+ + K + K+ +F ++G+ + +++ LI G+ A F
Sbjct: 631 GKTYEN-LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Query: 512 DEMIKAGMKPDHVTF 526
D+M + G+ D F
Sbjct: 690 DQMRREGLAADKEIF 704
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/543 (19%), Positives = 230/543 (42%), Gaps = 59/543 (10%)
Query: 109 HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGS-SSLCRIV 167
++ +N +I G + A + + M G+ PD + ++ G + +++
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 168 HCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILS----WNTMVSGYAF 223
+ G + + ++ ++G+ ++ ++ +A + F M + IL + T++ G+
Sbjct: 305 EVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
D AS+ F M D P+ +T+T+++S + G E +LF M +G E +
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS-- 421
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
V + I+GY K G+ + D +R H H+ A
Sbjct: 422 -------------VTFTELINGYC-KAGH---------MKDAFRVHNHMIQAGC------ 452
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
+ N+ ++ LI + G + A+ +L ++ K L+PN+ +++++++G G
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI-----GLQPNIFTYNSIVNGLCKSGNI 507
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
EE+++L + A + + VT++T++ + ++ +E+ + + I+ N L
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Query: 464 INMYMKCGDFKKGHLVFDNIEGRDL----ISWNSLISGYGMHGLGDNALTTFDEMIKAGM 519
+N + G + G + + + + + ++NSL+ Y + A + +M G+
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Query: 520 KPDHVTFVTALSACSHAGLVAAGRNLFYQMV-REFRIEPTVEHYACLVD-LLGRAGLLQ- 576
PD T+ + A + LF +M + F + +V Y+ L+ L R L+
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSV--SVSTYSVLIKGFLKRKKFLEA 685
Query: 577 -EANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIY 635
E D +R + ++ I+ DTK + I+ +I ++++ +
Sbjct: 686 REVFDQMRREGLAADKEIFDFF-------SDTKYKGKRPDTIVDPIDEIIENYLVDEQLR 738
Query: 636 AAN 638
AN
Sbjct: 739 GAN 741
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 102 bits (254), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 82/325 (25%), Positives = 155/325 (47%), Gaps = 20/325 (6%)
Query: 346 NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEE 405
N+ S+N +I + G +EAH +LL +E L G+ P +VIS+S V++G+ G ++
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLME--LKGYTP---DVISYSTVVNGYCRFGELDK 299
Query: 406 SLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLIN 465
+L M+ +KPN + +++ + + L E +R + + +V LI+
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 466 MYMKCGDFKKGHLVFDNIEGRDL----ISWNSLISGYGMHGLGDNALTTFDEMIKAGMKP 521
+ K GD + F + RD+ +++ ++ISG+ G A F EM G++P
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEP 419
Query: 522 DHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI 581
D VTF ++ AG + + M++ P V Y L+D L + G L AN++
Sbjct: 420 DSVTFTELINGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANEL 478
Query: 582 VRNM---PIEPNEYIWGALLNS-CRT---HKDTKIVEETASQILTLNSQITGSFMLLSNI 634
+ M ++PN + + +++N C++ + K+V E + L + T ++ L +
Sbjct: 479 LHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNAD---TVTYTTLMDA 535
Query: 635 YAANGRWEDSARVRISAKKKGLKKT 659
Y +G + + + KGL+ T
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPT 560
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 165/357 (46%), Gaps = 14/357 (3%)
Query: 237 MELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVE 296
MEL+ + P+ ++++++++ + R G D+ +L ++M+ +G + ++ +I + + +
Sbjct: 272 MELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICK 331
Query: 297 VDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE----SWNA 352
+ + E +I+ G V LID + K + A F+++ ++++ ++ A
Sbjct: 332 LAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTA 391
Query: 353 LISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRR 412
+IS + + G EA + ++ + L P+ ++++ +I+G+ G +++ +
Sbjct: 392 IISGFCQIGDMVEAGKLFHEM-----FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNH 446
Query: 413 MQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGD 472
M A PN VT++T++ + L+ EL + + NI N ++N K G+
Sbjct: 447 MIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGN 506
Query: 473 FKKGHLVFDNIEG----RDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVT 528
++ + E D +++ +L+ Y G D A EM+ G++P VTF
Sbjct: 507 IEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNV 566
Query: 529 ALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM 585
++ G++ G L M+ + I P + LV L+ A I ++M
Sbjct: 567 LMNGFCLHGMLEDGEKLLNWMLAK-GIAPNATTFNSLVKQYCIRNNLKAATAIYKDM 622
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/435 (20%), Positives = 186/435 (42%), Gaps = 35/435 (8%)
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL 172
+++++ G + ++ M++ G P+ + II LCRI
Sbjct: 284 YSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSII--------GLLCRICKLAEA 335
Query: 173 ELGFRNHLH--------VVNKLVGMYGKLGRMEDACQLFDGMPVRTI----LSWNTMVSG 220
E F + V L+ + K G + A + F M R I L++ ++SG
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEIS 280
+ D V A ++F M + P+SVT+T L++ + + G + + M GC +
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFF 340
+I ++D + E+ + K G + +F N++++ K ++ +A +
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 341 DIK----NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISG 396
+ + N + ++ L+ +Y +SG ++A +L K + G + L+P +++++ +++G
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL----KEMLG-KGLQPTIVTFNVLMNG 570
Query: 397 FASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELH-GYAVRNLMDD 455
F G E+ +L M + PN TF++++ L ++ R + D
Sbjct: 571 FCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPD 630
Query: 456 NILVGNGLINMYMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTF 511
N L+ + K + K+ +F ++G+ + +++ LI G+ A F
Sbjct: 631 GKTYEN-LVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVF 689
Query: 512 DEMIKAGMKPDHVTF 526
D+M + G+ D F
Sbjct: 690 DQMRREGLAADKEIF 704
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/543 (19%), Positives = 230/543 (42%), Gaps = 59/543 (10%)
Query: 109 HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGS-SSLCRIV 167
++ +N +I G + A + + M G+ PD + ++ G + +++
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 168 HCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILS----WNTMVSGYAF 223
+ G + + ++ ++G+ ++ ++ +A + F M + IL + T++ G+
Sbjct: 305 EVMKRK-GLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
D AS+ F M D P+ +T+T+++S + G E +LF M +G E +
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDS-- 421
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
V + I+GY K G+ + D +R H H+ A
Sbjct: 422 -------------VTFTELINGYC-KAGH---------MKDAFRVHNHMIQAGC------ 452
Query: 344 NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
+ N+ ++ LI + G + A+ +L ++ K L+PN+ +++++++G G
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKI-----GLQPNIFTYNSIVNGLCKSGNI 507
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
EE+++L + A + + VT++T++ + ++ +E+ + + I+ N L
Sbjct: 508 EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Query: 464 INMYMKCGDFKKGHLVFDNIEGRDL----ISWNSLISGYGMHGLGDNALTTFDEMIKAGM 519
+N + G + G + + + + + ++NSL+ Y + A + +M G+
Sbjct: 568 MNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGV 627
Query: 520 KPDHVTFVTALSACSHAGLVAAGRNLFYQMV-REFRIEPTVEHYACLVD-LLGRAGLLQ- 576
PD T+ + A + LF +M + F + +V Y+ L+ L R L+
Sbjct: 628 GPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSV--SVSTYSVLIKGFLKRKKFLEA 685
Query: 577 -EANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQITGSFMLLSNIY 635
E D +R + ++ I+ DTK + I+ +I ++++ +
Sbjct: 686 REVFDQMRREGLAADKEIFDFF-------SDTKYKGKRPDTIVDPIDEIIENYLVDEQLR 738
Query: 636 AAN 638
AN
Sbjct: 739 GAN 741
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 131/285 (45%), Gaps = 14/285 (4%)
Query: 324 DTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESG--LCEEAHAVLLQLEKSLDGHQ 381
+ Y +++ G+ H+ + +N+N +S + SSY +G + +E + ++ GH
Sbjct: 91 NGYNRNQSYGE-HSEIINQRNQNWQSSDG-CSSYGTTGNGVPQENNTGGNHFQQDHSGHS 148
Query: 382 PLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLG 441
L + +G ++++E+ + + + + +C + AL
Sbjct: 149 SLDE--------LDSICREGKVKKAVEIIKSWRNEGYVVDLPRLFWIAQLCGDAQALQEA 200
Query: 442 RELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMH 501
+ +H + ++ +I N +I MY CG + VF+++ R+L +W +I + +
Sbjct: 201 KVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETWCGVIRCFAKN 260
Query: 502 GLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEH 561
G G++A+ TF + G KPD F AC G + G F M +E+ I P +EH
Sbjct: 261 GQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYKEYGIIPCMEH 320
Query: 562 YACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKD 606
Y LV +L G L EA V +M EPN +W L+N R H D
Sbjct: 321 YVSLVKMLAEPGYLDEALRFVESM--EPNVDLWETLMNLSRVHGD 363
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 8/177 (4%)
Query: 46 FFIT-LLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPF 104
F+I L LQ+A+ +H + +I +Y+ GSV A VFN++P
Sbjct: 185 FWIAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPE 244
Query: 105 ERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLC 164
L+ W +IR +G E AI+ + ++ G PDG I AC LG +
Sbjct: 245 RNLE---TWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEG 301
Query: 165 RIVHCHAL--ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTMVS 219
++H ++ E G + LV M + G +++A + + M L W T+++
Sbjct: 302 -LLHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESMEPNVDL-WETLMN 356
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 134/614 (21%), Positives = 252/614 (41%), Gaps = 93/614 (15%)
Query: 58 QQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPLWNSII 117
Q ++S+ I F LI + + G +S A + +D + +N++I
Sbjct: 111 DQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVIS-IDTVT-YNTVI 168
Query: 118 RANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFR 177
HG + A + M K G PD + +I+ +G+ + + EL
Sbjct: 169 SGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLI 228
Query: 178 NHLHVVNKLVGMYGKLGRMEDACQ--LFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFK 235
H L+ Y L +E+A + + G +++++++++ + + +
Sbjct: 229 TH----TILLSSYYNLHAIEEAYRDMVMSGFD-PDVVTFSSIINRLCKGGKVLEGGLLLR 283
Query: 236 RMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVV 295
ME PN VT+T+L+ S + +Y L L+ M RG + V++
Sbjct: 284 EMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLM------- 336
Query: 296 EVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALIS 355
D LF L + + K L + + V N+ ++ AL+
Sbjct: 337 ------------------DGLFKAGDLREAEKTFKMLLEDNQV------PNVVTYTALVD 372
Query: 356 SYAESGLCEEAHAVLLQ-LEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQ 414
++G A ++ Q LEKS+ PNV+++S++I+G+ KG EE++ L R+M+
Sbjct: 373 GLCKAGDLSSAEFIITQMLEKSV------IPNVVTYSSMINGYVKKGMLEEAVSLLRKME 426
Query: 415 LAKVKPNCVTFSTVL----SVCAELAALNLGREL-------HGY---------------- 447
V PN T+ TV+ E A+ L +E+ + Y
Sbjct: 427 DQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIK 486
Query: 448 AVRNLMDDNILVG--------NGLINMYMKCGDFKKGHLVFDNIEGR----DLISWNSLI 495
V+ L+ D + G LI+++ K GD + + ++ R D++S+N LI
Sbjct: 487 EVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLI 546
Query: 496 SGYGMHGLGD-NALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFR 554
S GM G A + M + G++PD TF +++ G L+ +M +
Sbjct: 547 S--GMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKM-KSCG 603
Query: 555 IEPTVEHYACLVDLLGRAGLLQEANDIVRN---MPIEPNEYIWGALLNSCRTHKDTKIVE 611
I+P++ +V +L G ++EA I+ M I PN + L++ HK +
Sbjct: 604 IKPSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIF 663
Query: 612 ETASQILTLNSQIT 625
+T +L+ +++
Sbjct: 664 KTHETLLSYGIKLS 677
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/379 (21%), Positives = 166/379 (43%), Gaps = 43/379 (11%)
Query: 201 QLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCG 260
Q+ + + ++++++M++GY A + ++ME ++ PN T+ +++ + G
Sbjct: 389 QMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAG 448
Query: 261 LYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYV---IKGGYEDYLF 317
+ +EL K MR G E E ++ ++ + + R +E+ G V + G
Sbjct: 449 KEEMAIELSKEMRLIGVE---ENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQI 505
Query: 318 VKNALIDTYRKHKHLGDAHNVFFDIKNKNLE----SWNALIS----------SYAESGLC 363
+LID + K A +++ + + S+N LIS +A G+
Sbjct: 506 NYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWAYKGMR 565
Query: 364 EEA--------HAVLLQLEKSLDGHQPLR-----------PNVISWSAVISGFASKGCGE 404
E+ + ++ K D L+ P+++S + V+ G E
Sbjct: 566 EKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKME 625
Query: 405 ESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLI 464
E++ + +M L ++ PN T+ L ++ + + H + + + V N LI
Sbjct: 626 EAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLI 685
Query: 465 NMYMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMK 520
K G KK +V ++E R D +++NSL+ GY + AL+T+ M++AG+
Sbjct: 686 ATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGIS 745
Query: 521 PDHVTFVTALSACSHAGLV 539
P+ T+ T + S AGL+
Sbjct: 746 PNVATYNTIIRGLSDAGLI 764
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 107/545 (19%), Positives = 217/545 (39%), Gaps = 100/545 (18%)
Query: 107 LDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRI 166
+ ++ ++S+I V G E A+ + M P+GFT +I+ G +
Sbjct: 396 IPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIE 455
Query: 167 VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDA-------------------CQLFD--- 204
+ +G + ++++ LV ++GR+++ L D
Sbjct: 456 LSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFF 515
Query: 205 ------------------GMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNS 246
GMP ++S+N ++SG VGA +K M + P+
Sbjct: 516 KGGDEEAALAWAEEMQERGMP-WDVVSYNVLISG-MLKFGKVGADWAYKGMREKGIEPDI 573
Query: 247 VTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGY 306
T+ +++S ++ G + L+L+ M++ G + S + +V+ + + +++ + I
Sbjct: 574 ATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIHILNQ 633
Query: 307 VIKGGYEDYLFVKNALIDTYRKHKHLGDA----HNVFFDIKNK-NLESWNALISSYAESG 361
++ L +DT KHK DA H K + + +N LI++ + G
Sbjct: 634 MMLMEIHPNLTTYRIFLDTSSKHKR-ADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLG 692
Query: 362 LCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPN 421
+ ++A V+ +E + P+ +++++++ G+ ++L + M A + PN
Sbjct: 693 MTKKAAMVMGDMEA-----RGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPN 747
Query: 422 CVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMK-CGDFKKGHLVF 480
T++T+ +R L D GLI K + K +
Sbjct: 748 VATYNTI--------------------IRGLSD------AGLIKEVDKWLSEMKSRGMRP 781
Query: 481 DNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVA 540
D+ ++N+LISG G ++T + EMI G+ P T+ +S ++ G +
Sbjct: 782 DDF------TYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKML 835
Query: 541 AGRNLFYQMVREFRIEPTVEHYACLVDLL------------GRAGLLQEANDIVRNMPIE 588
R L +M + + P Y ++ L +A L EA +++ M +E
Sbjct: 836 QARELLKEMGKR-GVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEM-VE 893
Query: 589 PNEYI 593
YI
Sbjct: 894 EKGYI 898
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 182/423 (43%), Gaps = 30/423 (7%)
Query: 214 WNTMVSGYAFN---HDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFK 270
WN+++ + N HD V S I+ +M P+ L+ S + G + L
Sbjct: 96 WNSLIHQFNVNGLVHDQV--SLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISL-- 151
Query: 271 LMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHK 330
+R R I VIS + D + + ++K G N LID + K
Sbjct: 152 -LRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVG 210
Query: 331 HLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISW 390
+ A + +I NL + L+SSY EEA+ ++ P+V+++
Sbjct: 211 NFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVM--------SGFDPDVVTF 262
Query: 391 SAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVR 450
S++I+ G E L R M+ V PN VT++T++ + L+ V
Sbjct: 263 SSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVV 322
Query: 451 NLMDDNILVGNGLINMYMKCGDFKKGHLVF-----DNIEGRDLISWNSLISGYGMHGLGD 505
+ +++V L++ K GD ++ F DN + +++++ +L+ G G
Sbjct: 323 RGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDN-QVPNVVTYTALVDGLCKAGDLS 381
Query: 506 NALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACL 565
+A +M++ + P+ VT+ + ++ G++ +L +M + + P Y +
Sbjct: 382 SAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM-EDQNVVPNGFTYGTV 440
Query: 566 VDLLGRAGLLQEANDIVRNM---PIEPNEYIWGALLNSC----RTHKDTKIVEETASQIL 618
+D L +AG + A ++ + M +E N YI AL+N R + +V++ S+ +
Sbjct: 441 IDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGV 500
Query: 619 TLN 621
TL+
Sbjct: 501 TLD 503
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 124/599 (20%), Positives = 241/599 (40%), Gaps = 66/599 (11%)
Query: 45 DFFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPF 104
D I ++ + +++A+ L I + + A LI Y R +V ++ +
Sbjct: 351 DCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK 410
Query: 105 ERLDHIP-LWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEAC---SHLGS 160
+ P + ++++ S G + A I M G P+ +I+ S G
Sbjct: 411 RNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGD 470
Query: 161 SSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDA----CQLFDGMPVRTILSWNT 216
+ R++ E G + N L+ K RM++A ++ + ++
Sbjct: 471 A--MRVLK-EMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGA 527
Query: 217 MVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRG 276
+SGY + A + K M PN V T L++ + + G E ++ M +G
Sbjct: 528 FISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQG 587
Query: 277 CEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAH 336
A+ V+++ +VD + EI + G +F LI+ + K ++ A
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 337 NVFFDIKNKNLES----WNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSA 392
++F ++ + L +N L+ + SG E+A +L ++ S+ G L PN +++
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEM--SVKG---LHPNAVTYCT 702
Query: 393 VISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAEL----------------- 435
+I G+ G E+ LF M+L + P+ ++T++ C L
Sbjct: 703 IIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGC 762
Query: 436 --------AALN----LGR-ELHGYAVRNLMD--------DNILVGNGLINMYMKCGDFK 474
A +N G+ EL + LMD N + N +I+ K G+ +
Sbjct: 763 ASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLE 822
Query: 475 KGHLVFDNIEGRDL----ISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTAL 530
+F ++ +L I++ SL++GY G FDE I AG++PDH+ + +
Sbjct: 823 AAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVII 882
Query: 531 SACSHAGLVAAGRNLFYQMVREFRIEP----TVEHYACLVDLLGRAGLLQEANDIVRNM 585
+A G+ L QM + ++ ++ L+ + G ++ A ++ NM
Sbjct: 883 NAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENM 941
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 99/469 (21%), Positives = 201/469 (42%), Gaps = 51/469 (10%)
Query: 112 LWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHA 171
L++ ++R + AIE + M++ GF+P T I+ S L + +
Sbjct: 157 LFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADM 216
Query: 172 LELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPV----RTILSWNTMVSGYAFNHDC 227
+ +++++ N ++ + K G+++ A M V TI+++NT+V G++
Sbjct: 217 YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRI 276
Query: 228 VGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVV 287
GA I M+ + ++P+ T+ +LS G E L + M+ G + + ++
Sbjct: 277 EGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVL---REMKEIGLVPDSVSYNIL 333
Query: 288 ISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNL 347
I C++ +++ + ++K G + N LI + A + +I+ K +
Sbjct: 334 IRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGI 393
Query: 348 E----SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQP--------------------- 382
++N LI+ Y + G ++A A L E DG QP
Sbjct: 394 VLDSVTYNILINGYCQHGDAKKAFA--LHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA 451
Query: 383 -----------LRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVL-S 430
++P+++ + ++ G + G + + L + M + + P+ VT++ ++
Sbjct: 452 DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRG 511
Query: 431 VCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEG----R 486
+C E REL G R + + + N LI+ Y K GD K +V D +
Sbjct: 512 LCGE-GKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNP 570
Query: 487 DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSH 535
L+++N+L+ G + G+ A EM G+ P+ +F + + A S+
Sbjct: 571 TLLTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/350 (18%), Positives = 150/350 (42%), Gaps = 22/350 (6%)
Query: 261 LYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKN 320
+ DE +E F LM+ +G E ++++ + + ++ + + + + + ++ N
Sbjct: 170 MVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFN 229
Query: 321 ALIDTYRKHKHLGDAHNVF-----FDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEK 375
+I+ K L A F IK + ++N L+ ++ G E A ++ +++
Sbjct: 230 IMINVLCKEGKLKKAKGFLGIMEVFGIK-PTIVTYNTLVQGFSLRGRIEGARLIISEMKS 288
Query: 376 SLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAEL 435
+ +P++ +++ ++S ++G + E+ R M+ + P+ V+++ ++ C+
Sbjct: 289 -----KGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNN 340
Query: 436 AALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGR----DLISW 491
L + V+ M N LI+ + ++ I + D +++
Sbjct: 341 GDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTY 400
Query: 492 NSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVR 551
N LI+GY HG A DEM+ G++P T+ + + LF ++V
Sbjct: 401 NILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVG 460
Query: 552 EFRIEPTVEHYACLVDLLGRAGLLQEANDIVRN---MPIEPNEYIWGALL 598
+ ++P + L+D G + A +++ M I P++ + L+
Sbjct: 461 K-GMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLM 509
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 123/278 (44%), Gaps = 21/278 (7%)
Query: 431 VCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLIS 490
+C E L + +HG ++ ++ + L+ MY CG + VF+ + ++L +
Sbjct: 263 ICGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLET 322
Query: 491 WNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMV 550
W +I + +G G++A+ F + G PD F AC G V G F M
Sbjct: 323 WCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMS 382
Query: 551 REFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIV 610
R++ I P++E Y LV++ G L EA + V MP+EPN +W L+N R H + ++
Sbjct: 383 RDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELG 442
Query: 611 EETASQI-----LTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGLKKTPGQSWI 665
+ A + LN Q F+ + A++ +K+ LKK G
Sbjct: 443 DYCAEVVEFLDPTRLNKQSREGFI---PVKASD------------VEKESLKKRSG-ILH 486
Query: 666 EVRKKVYTFSAGNIVHLGLDEVYVILEELALQMANENY 703
V+ + F AG+ DE++ +L L + M Y
Sbjct: 487 GVKSSMQEFRAGDTNLPENDELFQLLRNLKMHMVEVGY 524
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 86/193 (44%), Gaps = 17/193 (8%)
Query: 53 QCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHIPL 112
+ LQ+A+ +H + + ++ L+ +Y+ G + A VF + + L+
Sbjct: 266 EAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLE---T 322
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL 172
W IIR +G+ E AI+++ ++ G PDG I AC LG ++H ++
Sbjct: 323 WCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEG-LLHFESM 381
Query: 173 --ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR-TILSWNTMVSGYAFNHDCVG 229
+ G + LV MY G +++A + + MP+ + W T+++
Sbjct: 382 SRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMN---------- 431
Query: 230 ASRIFKRMELEDW 242
SR+ +EL D+
Sbjct: 432 LSRVHGNLELGDY 444
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 165/350 (47%), Gaps = 14/350 (4%)
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREI 303
P+ V + LLS+ + YD + L K M G +VI+ +V + I
Sbjct: 83 PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSI 142
Query: 304 HGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNV---FFDIKNK-NLESWNALISSYAE 359
G ++K GYE +L++ + + + DA ++ +I K ++ ++NA+I S +
Sbjct: 143 LGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCK 202
Query: 360 SGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVK 419
+ +A ++E+ + +RPNV++++A+++G + ++ L M K+
Sbjct: 203 TKRVNDAFDFFKEIER-----KGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKIT 257
Query: 420 PNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLV 479
PN +T+S +L + + +EL VR +D +I+ + LIN + + +
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317
Query: 480 FDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSH 535
FD + + D++S+N+LI+G+ ++ + F EM + G+ + VT+ T +
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377
Query: 536 AGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM 585
AG V + F QM F I P + Y L+ L G L++A I +M
Sbjct: 378 AGDVDKAQEFFSQM-DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/454 (19%), Positives = 191/454 (42%), Gaps = 56/454 (12%)
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL 172
+N ++ A V ++ I + M G D +T ++I SL + L
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 173 ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGM------PVRTILSWNTMVSGYAFNHD 226
+LG+ + LV + + R+ DA L D M P I+++N ++
Sbjct: 148 KLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKP--DIVAYNAIIDSLCKTKR 205
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
A FK +E + RPN VT+T+L++ + + L M + + +
Sbjct: 206 VNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSA 265
Query: 287 VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK- 345
++ +V ++E+ +++ + + ++LI+ H + +A+ +F + +K
Sbjct: 266 LLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKG 325
Query: 346 ---NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGC 402
++ S+N LI+ + ++ E+ + ++ + L N ++++ +I GF G
Sbjct: 326 CLADVVSYNTLINGFCKAKRVEDGMKLFREM-----SQRGLVSNTVTYNTLIQGFFQAGD 380
Query: 403 GEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNG 462
+++ E F +M + P+ T+ NIL+G
Sbjct: 381 VDKAQEFFSQMDFFGISPDIWTY------------------------------NILLGGL 410
Query: 463 LINMYMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAG 518
N G+ +K ++F++++ R D++++ ++I G G + A + F + G
Sbjct: 411 CDN-----GELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKG 465
Query: 519 MKPDHVTFVTALSACSHAGLVAAGRNLFYQMVRE 552
+KPD VT+ T +S GL+ L+ +M +E
Sbjct: 466 LKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/357 (20%), Positives = 164/357 (45%), Gaps = 21/357 (5%)
Query: 109 HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEA-CSHLGSSSLCRIV 167
I +N+II + A + + + + G P+ T ++ C+ S R++
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLL 248
Query: 168 HCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRT-----ILSWNTMVSGYA 222
++ ++ + L+ + K G++ +A +LF+ M VR I++++++++G
Sbjct: 249 S-DMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM-VRMSIDPDIVTYSSLINGLC 306
Query: 223 FNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAE 282
+ A+++F M + + V++ +L++ + ++ ++LF+ M RG +
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 283 ALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDI 342
+I +VD+++E + G ++ N L+ + L A +F D+
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 343 KNKNLE----SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFA 398
+ + ++ ++ +I ++G EEA ++ L SL G L+P++++++ ++SG
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL--SLKG---LKPDIVTYTTMMSGLC 481
Query: 399 SKGCGEESLELFRRM-QLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMD 454
+KG E L+ +M Q +K +C +++ AEL L GYA L D
Sbjct: 482 TKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLS---CGYAPSLLKD 535
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 153/329 (46%), Gaps = 21/329 (6%)
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL 172
+N++++ V G + A + M K G PD T L+I+A + G RIV +
Sbjct: 342 YNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIV-LKEM 400
Query: 173 ELG-FRNHLHVVNKLVGMYGKLGRMEDACQLFDGM------PVRTILSWNTMVSGYAFNH 225
E G + + V ++L+ + G + Q+ M P R +N ++ +
Sbjct: 401 EAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQF--YNVVIDTFG-KF 457
Query: 226 DCVG-ASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEAL 284
+C+ A F RM E P+ VTW +L+ H + G + E+F+ M RGC A
Sbjct: 458 NCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTY 517
Query: 285 AVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN 344
++I+ D D + + G + G + L+D Y K DA ++K+
Sbjct: 518 NIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKS 577
Query: 345 KNLES----WNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASK 400
L+ +NALI++YA+ GL E+A + + DG L+P++++ +++I+ F
Sbjct: 578 VGLKPSSTMYNALINAYAQRGLSEQAVNAFRVM--TSDG---LKPSLLALNSLINAFGED 632
Query: 401 GCGEESLELFRRMQLAKVKPNCVTFSTVL 429
E+ + + M+ VKP+ VT++T++
Sbjct: 633 RRDAEAFAVLQYMKENGVKPDVVTYTTLM 661
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 103/520 (19%), Positives = 214/520 (41%), Gaps = 34/520 (6%)
Query: 111 PL-WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSH---LGSSSLCRI 166
PL +N++I A + E A+ + MR+ G+ D L+I++ + + S L R+
Sbjct: 197 PLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRL 256
Query: 167 ---VHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNT-----MV 218
+ LEL + +VN ++ + K G A QL GM T LS T ++
Sbjct: 257 YKEIERDKLEL----DVQLVNDIIMGFAKSGDPSKALQLL-GMAQATGLSAKTATLVSII 311
Query: 219 SGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCE 278
S A + + A +F+ + +P + + +LL + + G + + M RG
Sbjct: 312 SALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVS 371
Query: 279 ISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNV 338
+++I + + +R + + G + FV + L+ +R V
Sbjct: 372 PDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQV 431
Query: 339 FFDIKN----KNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVI 394
++K+ + + +N +I ++ + + A + ++ L + + P+ ++W+ +I
Sbjct: 432 LKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHA---MTTFDRMLS--EGIEPDRVTWNTLI 486
Query: 395 SGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMD 454
G + E+F M+ P T++ +++ + + + L G +
Sbjct: 487 DCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGIL 546
Query: 455 DNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDL----ISWNSLISGYGMHGLGDNALTT 510
N++ L+++Y K G F + ++ L +N+LI+ Y GL + A+
Sbjct: 547 PNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNA 606
Query: 511 FDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLG 570
F M G+KP + + ++A A + Q ++E ++P V Y L+ L
Sbjct: 607 FRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVL-QYMKENGVKPDVVTYTTLMKALI 665
Query: 571 RAGLLQEANDIVRNMPI---EPNEYIWGALLNSCRTHKDT 607
R Q+ + M + +P+ L ++ R K T
Sbjct: 666 RVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALRYMKQT 705
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/443 (19%), Positives = 184/443 (41%), Gaps = 24/443 (5%)
Query: 97 KVFNAVPFERLD-HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEAC 155
+++ + ++L+ + L N II G A+++ + G TL II A
Sbjct: 255 RLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISAL 314
Query: 156 SHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTIL--- 212
+ G + + + G + N L+ Y K G ++DA + M R +
Sbjct: 315 ADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDE 374
Query: 213 -SWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKL 271
+++ ++ Y A + K ME D +PNS ++ LL+ + G + +T ++ K
Sbjct: 375 HTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKE 434
Query: 272 MRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKH 331
M++ G + + VVI +D + ++ G E N LID + KH
Sbjct: 435 MKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGR 494
Query: 332 LGDAHNVFFDIKNKN----LESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNV 387
A +F ++ + ++N +I+SY + ++ +L +++ Q + PNV
Sbjct: 495 HIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKS-----QGILPNV 549
Query: 388 ISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGY 447
++ + ++ + G +++E M+ +KP+ ++ +++ A+
Sbjct: 550 VTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRV 609
Query: 448 AVRNLMDDNILVGNGLINMYMKCGDFKKGHLVF-------DNIEGRDLISWNSLISGYGM 500
+ + ++L N LIN + G+ ++ F +N D++++ +L+
Sbjct: 610 MTSDGLKPSLLALNSLINAF---GEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIR 666
Query: 501 HGLGDNALTTFDEMIKAGMKPDH 523
++EMI +G KPD
Sbjct: 667 VDKFQKVPVVYEEMIMSGCKPDR 689
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 101/457 (22%), Positives = 187/457 (40%), Gaps = 89/457 (19%)
Query: 193 LGRMEDACQLF--DGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWT 250
LGR E + F T L++N ++ A N+D A + +M + ++ + V ++
Sbjct: 177 LGRSEKLYEAFLLSQKQTLTPLTYNALIGACARNNDIEKALNLIAKMRQDGYQSDFVNYS 236
Query: 251 SLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKG 310
++ S R D + L +L + EI + L + + + D+ I G+ G
Sbjct: 237 LVIQSLTRSNKIDSVM-LLRLYK----EIERDKLELDVQLVNDI--------IMGFAKSG 283
Query: 311 GYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVL 370
D + + LG A K L S +IS+ A+SG EA A+
Sbjct: 284 -------------DPSKALQLLGMAQATGLSAKTATLVS---IISALADSGRTLEAEALF 327
Query: 371 LQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLS 430
+L +S ++P +++A++ G+ G +++ + M+ V P+ T+S ++
Sbjct: 328 EELRQS-----GIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLID 382
Query: 431 VCAELAALNLGRELHGYAVRNLMD-----DNILVGNGLINMYMKCGDFKKGHLVFDNIEG 485
A +N GR V M+ N V + L+ + G+++K V ++
Sbjct: 383 -----AYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKS 437
Query: 486 ----RDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSA-CSHAGLVA 540
D +N +I +G D+A+TTFD M+ G++PD VT+ T + C H +
Sbjct: 438 IGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIV 497
Query: 541 AGRNLFYQMVRE----------------------------------FRIEPTVEHYACLV 566
A +F M R I P V + LV
Sbjct: 498 A-EEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLV 556
Query: 567 DLLGRAGLLQEANDIVRNMP---IEPNEYIWGALLNS 600
D+ G++G +A + + M ++P+ ++ AL+N+
Sbjct: 557 DVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINA 593
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/522 (20%), Positives = 217/522 (41%), Gaps = 70/522 (13%)
Query: 82 LIALYARFGSVSHAQKVF-----NAVPFERLDHIPLWNSIIRANVSHGYFEFAIEIYVGM 136
L+ ++ + G + A V N+ P + + +N ++ A V G+ + A + M
Sbjct: 322 LLQVFGKAGVYTEALSVLKEMEENSCPADSVT----YNELVAAYVRAGFSKEAAGVIEMM 377
Query: 137 RKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRM 196
K G P+ T +I+A G + E G + N ++ + GK R
Sbjct: 378 TKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRS 437
Query: 197 EDACQLFDGM------PVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWT 250
+ ++ M P R +WNTM++ +R+F+ M+ + P+ T+
Sbjct: 438 NEMIKMLCDMKSNGCSPNRA--TWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFN 495
Query: 251 SLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKG 310
+L+S++ RCG EVD S+ ++G + +
Sbjct: 496 TLISAYGRCG----------------------------------SEVDASK-MYGEMTRA 520
Query: 311 GYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE----SWNALISSYAESGLCEEA 366
G+ + NAL++ + NV D+K+K + S++ ++ YA+ G
Sbjct: 521 GFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGG----N 576
Query: 367 HAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG--EESLELFRRMQLAKVKPNCVT 424
+ + ++E + Q ++ + +++ F + E + LF++ KP+ V
Sbjct: 577 YLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGY---KPDMVI 633
Query: 425 FSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIE 484
F+++LS+ + + + + +++ N L++MY++ G+ K + +E
Sbjct: 634 FNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLE 693
Query: 485 GR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVA 540
DL+S+N++I G+ GL A+ EM + G++P T+ T +S + G+ A
Sbjct: 694 KSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFA 753
Query: 541 AGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIV 582
++ M + P + +VD RAG EA D V
Sbjct: 754 EIEDVIECMAKN-DCRPNELTFKMVVDGYCRAGKYSEAMDFV 794
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 115/554 (20%), Positives = 210/554 (37%), Gaps = 92/554 (16%)
Query: 82 LIALYARFGSVSHAQKVFNAVPF-ERLDHIPLWNSIIRANVSHGYFEFAIEIYVGMRKFG 140
+ + R S A K+ + +P E L + + +I+ A G +E AI+++ M++ G
Sbjct: 181 FVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMG 240
Query: 141 FFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDAC 200
P T +I++ +G S +R L G L M
Sbjct: 241 PSPTLVTYNVILDVFGKMGRS--------------WRKIL----------GVLDEMRSKG 276
Query: 201 QLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCG 260
FD T+LS A A F ++ + P +VT+ +LL + G
Sbjct: 277 LKFDEFTCSTVLS------ACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAG 330
Query: 261 LYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYV---IKGGYEDYLF 317
+Y E L + K M C + ++ A V S+E G + K G
Sbjct: 331 VYTEALSVLKEMEENSCPADSVTYNELV---AAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 318 VKNALIDTYRKHKHLGDAHNVFFDIKN----KNLESWNALISSYAESGLCEEAHAVLLQL 373
+ID Y K +A +F+ +K N ++NA++S + E +L +
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 374 EKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCA 433
+ + PN +W+ +++ +KG + +FR M+ +P+ TF+T++S
Sbjct: 448 KSN-----GCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYG 502
Query: 434 ELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNI---------- 483
+ +++G R + + N L+N + GD++ G V ++
Sbjct: 503 RCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTET 562
Query: 484 --------------------------EGRDLISW----NSLISGYGMHGLG--DNALTTF 511
EG+ SW L++ + L + A T F
Sbjct: 563 SYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLF 622
Query: 512 DEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGR 571
K G KPD V F + LS + + + + +RE + P + Y L+D+ R
Sbjct: 623 K---KHGYKPDMVIFNSMLSIFTRNNMYDQAEGIL-ESIREDGLSPDLVTYNSLMDMYVR 678
Query: 572 AGLLQEANDIVRNM 585
G +A +I++ +
Sbjct: 679 RGECWKAEEILKTL 692
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 115/273 (42%), Gaps = 14/273 (5%)
Query: 346 NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG-E 404
++ ++ ++ +Y+ +G E+A + L + + P P +++++ ++ F G
Sbjct: 209 DVRAYTTILHAYSRTGKYEKA----IDLFERMKEMGP-SPTLVTYNVILDVFGKMGRSWR 263
Query: 405 ESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLI 464
+ L + M+ +K + T STVLS CA L +E + + N L+
Sbjct: 264 KILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALL 323
Query: 465 NMYMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMK 520
++ K G + + V +E D +++N L++ Y G A + M K G+
Sbjct: 324 QVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVM 383
Query: 521 PDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAND 580
P+ +T+ T + A AG LFY M +E P Y ++ LLG+ E
Sbjct: 384 PNAITYTTVIDAYGKAGKEDEALKLFYSM-KEAGCVPNTCTYNAVLSLLGKKSRSNEMIK 442
Query: 581 IVRNMP---IEPNEYIWGALLNSCRTHKDTKIV 610
++ +M PN W +L C K V
Sbjct: 443 MLCDMKSNGCSPNRATWNTMLALCGNKGMDKFV 475
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 102/474 (21%), Positives = 209/474 (44%), Gaps = 45/474 (9%)
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL 172
+N ++ + G E A+E Y +RK G FPD T ++ + V
Sbjct: 378 YNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMD 437
Query: 173 ELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTILSWNTM---VSGYAFNHDCVG 229
R H V ++ MY G + A LF+ + +LS T+ + YA V
Sbjct: 438 RNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYAEKGLWVE 497
Query: 230 ASRIF-KRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVI 288
A +F + + R + + + ++ ++ + L+++ L LFK M+ +G +
Sbjct: 498 AETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLF 557
Query: 289 SVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE 348
+ A V VD ++ I ++ G + A+I +Y + L DA +++ ++ ++
Sbjct: 558 QMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVK 617
Query: 349 S----WNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGE 404
+ +LI+ +AESG+ EEA +Q + ++ H ++ N I +++I ++ GC E
Sbjct: 618 PNEVVYGSLINGFAESGMVEEA----IQYFRMMEEHG-VQSNHIVLTSLIKAYSKVGCLE 672
Query: 405 ESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLI 464
E+ ++ +M+ ++ P+ +++LS+CA+L ++ + N L G
Sbjct: 673 EARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIF----------NALREKGTC 722
Query: 465 NMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHV 524
D+IS+ +++ Y G+ D A+ +EM ++G+ D
Sbjct: 723 ----------------------DVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCT 760
Query: 525 TFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEA 578
+F ++ + G ++ LF++M+ E ++ + L LL + G+ EA
Sbjct: 761 SFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEA 814
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 104/450 (23%), Positives = 195/450 (43%), Gaps = 56/450 (12%)
Query: 184 NKLVGMYGKLGRMEDACQLFD-----GMPVRTILSWNTMVSGYAFNHDCVGASRIFKRME 238
N L+ +YGK GR+ DA LF G+P+ T+ ++NTM+ + A + K+ME
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTV-TFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 239 LEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRG---------------CE--ISA 281
+ P++ T+ LLS H G + LE ++ +R G C+ + A
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVA 427
Query: 282 EALAVVISVCADVVEVDRSREI--------HGYVI--KGGYEDYLF-------VKNALID 324
E AV+ + + + +D G V+ K +E + A+ID
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVID 487
Query: 325 TYRKHKHLGDAHNVFFDIKN-----KNLESWNALISSYAESGLCEEAHAVLLQLEKSLDG 379
Y + +A VF+ +N ++ +N +I +Y ++ L E+A L L K +
Sbjct: 488 VYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKA----LSLFKGMK- 542
Query: 380 HQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALN 439
+Q P+ +++++ A +E+ + M + KP C T++ +++ L L+
Sbjct: 543 NQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLS 602
Query: 440 LGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDL----ISWNSLI 495
+L+ + + N +V LIN + + G ++ F +E + I SLI
Sbjct: 603 DAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLI 662
Query: 496 SGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRI 555
Y G + A +D+M + PD + LS C+ G+V+ ++F + +
Sbjct: 663 KAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC 722
Query: 556 EPTVEHYACLVDLLGRAGLLQEANDIVRNM 585
+ V +A ++ L G+L EA ++ M
Sbjct: 723 D--VISFATMMYLYKGMGMLDEAIEVAEEM 750
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 169/378 (44%), Gaps = 59/378 (15%)
Query: 320 NALIDTYRKHKHLGDAHNVFFDIKNKNLE----SWNALISSYAESGLCEEAHAVLLQLEK 375
N LID Y K L DA N+F ++ + ++N +I + G EA ++L ++E+
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEE 368
Query: 376 SLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVL------ 429
+ + P+ +++ ++S A G E +LE +R+++ + P+ VT VL
Sbjct: 369 -----KGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQR 423
Query: 430 -------SVCAELAALNLGRELHGYAV------------------RNLMDDNILVGNGL- 463
+V AE+ ++ + H V D +L L
Sbjct: 424 KMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLA 483
Query: 464 --INMYMKCGDFKKGHLVF---DNIEGR--DLISWNSLISGYGMHGLGDNALTTFDEMIK 516
I++Y + G + + VF N+ G+ D++ +N +I YG L + AL+ F M
Sbjct: 484 AVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKN 543
Query: 517 AGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQ 576
G PD T+ + + LV + + +M+ + +P + YA ++ R GLL
Sbjct: 544 QGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML-DSGCKPGCKTYAAMIASYVRLGLLS 602
Query: 577 EANDIVRNMP---IEPNEYIWGALLNSCRTHKDTKIVEETASQILTLNSQ-ITGSFMLLS 632
+A D+ M ++PNE ++G+L+N ++ +VEE + + + ++L+
Sbjct: 603 DAVDLYEAMEKTGVKPNEVVYGSLING---FAESGMVEEAIQYFRMMEEHGVQSNHIVLT 659
Query: 633 NI---YAANGRWEDSARV 647
++ Y+ G E++ RV
Sbjct: 660 SLIKAYSKVGCLEEARRV 677
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 114/546 (20%), Positives = 221/546 (40%), Gaps = 64/546 (11%)
Query: 59 QARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNA---VPFERLDHIPLWNS 115
QA+ L + L LAA +I +YA G A+ VF + +R D + +N
Sbjct: 463 QAKALFERFQLDCVLSSTTLAA-VIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLE-YNV 520
Query: 116 IIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELG 175
+I+A E A+ ++ GM+ G +PD T + + + + + + L+ G
Sbjct: 521 MIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSG 580
Query: 176 FRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTI----LSWNTMVSGYAFNHDCVGAS 231
+ ++ Y +LG + DA L++ M + + + ++++G+A + A
Sbjct: 581 CKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAI 640
Query: 232 RIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVC 291
+ F+ ME + N + TSL+ ++ + G +E ++ M+ A ++S+C
Sbjct: 641 QYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLC 700
Query: 292 ADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNL---- 347
AD+ V + I + + G D + ++ Y+ L +A V +++ L
Sbjct: 701 ADLGIVSEAESIFNALREKGTCDVISFAT-MMYLYKGMGMLDEAIEVAEEMRESGLLSDC 759
Query: 348 ESWNALISSYAESG----LCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
S+N +++ YA G CE H +L++ R ++ W + F G
Sbjct: 760 TSFNQVMACYAADGQLSECCELFHEMLVE-----------RKLLLDWGTFKTLFTLLKKG 808
Query: 404 EESLELFRRMQLA--KVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGN 461
E ++Q A + KP L+ A A L L+ YA+ +
Sbjct: 809 GVPSEAVSQLQTAYNEAKP--------LATPAITATLFSAMGLYAYALES---------- 850
Query: 462 GLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKP 521
C + G + R+ ++N++I Y G D AL + M + G++P
Sbjct: 851 --------CQELTSGEI------PREHFAYNAVIYTYSASGDIDMALKAYMRMQEKGLEP 896
Query: 522 DHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI 581
D VT + AG+V + + ++ +EP+ + + D A A+ +
Sbjct: 897 DIVTQAYLVGIYGKAGMVEGVKRVHSRLTFG-ELEPSQSLFKAVRDAYVSANRQDLADVV 955
Query: 582 VRNMPI 587
+ M I
Sbjct: 956 KKEMSI 961
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 109/255 (42%), Gaps = 29/255 (11%)
Query: 335 AHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVI 394
AHN N ++ L+ Y ++GL +EA LL ++ G + P+ ++ + V+
Sbjct: 172 AHNGVLPTNN----TYGMLVDVYGKAGLVKEA---LLWIKHM--GQRMHFPDEVTMATVV 222
Query: 395 SGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGR----ELHGYAVR 450
F + G + + F+ KV + + + + +NL + EL R
Sbjct: 223 RVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGAR 282
Query: 451 NLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTT 510
N ++ ++ +G + K R ++N+LI YG G ++A
Sbjct: 283 NPIEKSLHFASGSDSSPRK---------------PRLTSTFNTLIDLYGKAGRLNDAANL 327
Query: 511 FDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLG 570
F EM+K+G+ D VTF T + C G ++ +L +M E I P + Y L+ L
Sbjct: 328 FSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM-EEKGISPDTKTYNILLSLHA 386
Query: 571 RAGLLQEANDIVRNM 585
AG ++ A + R +
Sbjct: 387 DAGDIEAALEYYRKI 401
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 182/406 (44%), Gaps = 58/406 (14%)
Query: 251 SLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGY---V 307
+L+ ++ G + ++ F+L R ++ ++ +++++ + I G+ +
Sbjct: 175 ALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLD---RMMKLNPTGTIWGFYMEI 231
Query: 308 IKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE----SWNALISSYAESGLC 363
+ G+ ++V N L++ + K ++ DA VF +I ++L+ S+N LI+ Y + G
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL 291
Query: 364 EEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCV 423
+E + Q+EKS RP+V ++SA+I+ + + + LF M + PN V
Sbjct: 292 DEGFRLKHQMEKSR-----TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDV 346
Query: 424 TFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNI 483
F+T++ + ++L +E + + + +I++ N L+N + K GD + D +
Sbjct: 347 IFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM 406
Query: 484 EGR----DLISWNSLISGYGMHGLGDNALT------------------------------ 509
R D I++ +LI G+ G + AL
Sbjct: 407 IRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRV 466
Query: 510 -----TFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYAC 564
EM++AG+KPD VT+ + A G G L +M + + P+V Y
Sbjct: 467 IDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHV-PSVVTYNV 525
Query: 565 LVDLLGRAGLLQEAN---DIVRNMPIEPNEYIWGALLNSCRTHKDT 607
L++ L + G ++ A+ D + N+ + P++ + LL H ++
Sbjct: 526 LLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANS 571
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 179/412 (43%), Gaps = 54/412 (13%)
Query: 172 LELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR----TILSWNTMVSGYAFNHDC 227
L+ GF +++V N L+ + K G + DA ++FD + R T++S+NT+++GY +
Sbjct: 232 LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNL 291
Query: 228 VGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVV 287
R+ +ME RP+ T+++L+++ + D LF M RG + +
Sbjct: 292 DEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTL 351
Query: 288 ISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNL 347
I + E+D +E + ++ G + + + N L++ + K+ L A N+
Sbjct: 352 IHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNI--------- 402
Query: 348 ESWNALISSYAESGLCEEAHAVLLQLEKSLDG--HQPLRPNVISWSAVISGFASKGCGEE 405
+DG + LRP+ I+++ +I GF G E
Sbjct: 403 -----------------------------VDGMIRRGLRPDKITYTTLIDGFCRGGDVET 433
Query: 406 SLELFRRMQLAKVKPNCVTFST-VLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLI 464
+LE+ + M ++ + V FS V +C E ++ R L + D++ ++
Sbjct: 434 ALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTY-TMMM 492
Query: 465 NMYMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMK 520
+ + K GD + G + ++ ++++N L++G G NA D M+ G+
Sbjct: 493 DAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVV 552
Query: 521 PDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRA 572
PD +T+ T L H ++ R Y E I + Y +V+ L RA
Sbjct: 553 PDDITYNTLLEG-HHRHANSSKR---YIQKPEIGIVADLASYKSIVNELDRA 600
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/354 (20%), Positives = 144/354 (40%), Gaps = 43/354 (12%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLDHIPL-WNSIIRANVSHGYFEFAIEIYVGMRKFG 140
L+ + + G++S AQKVF+ + L + +N++I G + + M K
Sbjct: 246 LMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR 305
Query: 141 FFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDAC 200
PD FT +I A + + G + + L+ + + G ++
Sbjct: 306 TRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMK 365
Query: 201 QLFDGMPVR----TILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSH 256
+ + M + I+ +NT+V+G+ N D V A I M RP+ +T+T+L+
Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGF 425
Query: 257 KRCGLYDETLELFKLMRTRGCEISAEAL-AVVISVCADVVEVDRSREIHGYVIKGGYEDY 315
R G + LE+ K M G E+ A+V +C + +D R + + G D
Sbjct: 426 CRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDD 485
Query: 316 LFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEK 375
+ ++ ++ ++ + G + +L +++
Sbjct: 486 V--------------------------------TYTMMMDAFCKKGDAQTGFKLLKEMQS 513
Query: 376 SLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVL 429
DGH P+V++++ +++G G + + L M V P+ +T++T+L
Sbjct: 514 --DGHV---PSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLL 562
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 109/521 (20%), Positives = 223/521 (42%), Gaps = 36/521 (6%)
Query: 91 SVSHAQKVFNAVPFERLD-HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLP 149
++S A+ VF + ++ ++ +N +IR G + A+ ++ M G P+ T
Sbjct: 185 NISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYN 244
Query: 150 LIIEA-CSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPV 208
+I+ C +++ AL+ G +L N ++ + GRM++ + M
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSMALK-GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR 303
Query: 209 RTI----LSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDE 264
R +++NT++ GY + A + M P+ +T+TSL+ S + G +
Sbjct: 304 RGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNR 363
Query: 265 TLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALID 324
+E MR RG + ++ + ++ + + + G+ + NALI+
Sbjct: 364 AMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALIN 423
Query: 325 TYRKHKHLGDAHNVFFDIKNKNLE----SWNALISSYAESGLCEEAHAVLLQLEKSLDGH 380
+ + DA V D+K K L S++ ++S + S +EA L++++ +
Sbjct: 424 GHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEA----LRVKREM-VE 478
Query: 381 QPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNL 440
+ ++P+ I++S++I GF + +E+ +L+ M + P+ T++ +++ L
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 441 GRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKG-------------------HLVFD 481
+LH V + +++ + LIN K ++ H + +
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIE 598
Query: 482 NIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAA 541
N + S SLI G+ M G+ A F+ M+ KPD + + AG +
Sbjct: 599 NCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRK 658
Query: 542 GRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIV 582
L+ +MV+ + TV A LV L + G + E N ++
Sbjct: 659 AYTLYKEMVKSGFLLHTVTVIA-LVKALHKEGKVNELNSVI 698
Score = 98.6 bits (244), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/517 (19%), Positives = 221/517 (42%), Gaps = 39/517 (7%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLD-HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFG 140
LI Y + + K+ ++ + L+ ++ +N +I G + + M + G
Sbjct: 246 LIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRG 305
Query: 141 FFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDAC 200
+ D T +I+ G+ ++H L G + L+ K G M A
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 201 QLFDGMPVRTIL----SWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSH 256
+ D M VR + ++ T+V G++ A R+ + M + P+ VT+ +L++ H
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGH 425
Query: 257 KRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYL 316
G ++ + + + M+ +G + + V+S +VD + + +++ G +
Sbjct: 426 CVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDT 485
Query: 317 FVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE----SWNALISSYAESGLCEEAHAVLLQ 372
++LI + + + +A +++ ++ L ++ ALI++Y G E+A LQ
Sbjct: 486 ITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA----LQ 541
Query: 373 LEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVC 432
L + + + P+V+++S +I+G + E+ L ++ + P+ VT+ T++ C
Sbjct: 542 LHNEM-VEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600
Query: 433 AELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGR----DL 488
+ + ++ + G+ ++ +M + VF+++ G+ D
Sbjct: 601 SNIEFKSVVSLIKGFCMKGMMTE--------------------ADQVFESMLGKNHKPDG 640
Query: 489 ISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQ 548
++N +I G+ G A T + EM+K+G VT + + A G V ++
Sbjct: 641 TAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVH 700
Query: 549 MVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM 585
++R + E LV++ R G + D++ M
Sbjct: 701 VLRSCELSE-AEQAKVLVEINHREGNMDVVLDVLAEM 736
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 93/474 (19%), Positives = 199/474 (41%), Gaps = 49/474 (10%)
Query: 140 GFFPDGFTLPLIIEACSHLGSS-SLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMED 198
GF P + +++A + S V LE ++ N L+ + G ++
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDV 223
Query: 199 ACQLFDGMPVR----TILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLS 254
A LFD M + ++++NT++ GY ++ + M L+ PN +++ +++
Sbjct: 224 ALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVIN 283
Query: 255 SHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYED 314
R G E + M RG + +I ++ +H +++ G
Sbjct: 284 GLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTP 343
Query: 315 YLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNL----ESWNALISSYAESGLCEEAHAVL 370
+ +LI + K ++ A ++ + L ++ L+ +++ G EA+ VL
Sbjct: 344 SVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVL 403
Query: 371 LQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLS 430
++ + P+V++++A+I+G G E+++ + M+ + P+ V++STVLS
Sbjct: 404 REMNDN-----GFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLS 458
Query: 431 VCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLIS 490
G+ +D+ + V ++ +K D I+
Sbjct: 459 ---------------GFCRSYDVDEALRVKREMVEKGIK----------------PDTIT 487
Query: 491 WNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMV 550
++SLI G+ A ++EM++ G+ PD T+ ++A G + L +MV
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 551 REFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNMPIE---PNEYIWGALLNSC 601
E + P V Y+ L++ L + +EA ++ + E P++ + L+ +C
Sbjct: 548 -EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 89/436 (20%), Positives = 189/436 (43%), Gaps = 18/436 (4%)
Query: 113 WNSIIRANV-SHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHA 171
+N+++ A + S FA ++ M + P+ FT ++I G+ + +
Sbjct: 172 YNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM 231
Query: 172 LELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR----TILSWNTMVSGYAFNHDC 227
G ++ N L+ Y KL +++D +L M ++ ++S+N +++G
Sbjct: 232 ETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRM 291
Query: 228 VGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVV 287
S + M + + VT+ +L+ + + G + + L + M G S +
Sbjct: 292 KEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSL 351
Query: 288 ISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNL 347
I ++R+ E + G L+D + + ++ +A+ V ++ +
Sbjct: 352 IHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGF 411
Query: 348 E----SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
++NALI+ + +G E+A AVL +++ + L P+V+S+S V+SGF
Sbjct: 412 SPSVVTYNALINGHCVTGKMEDAIAVLEDMKE-----KGLSPDVVSYSTVLSGFCRSYDV 466
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
+E+L + R M +KP+ +T+S+++ E +L+ +R + + L
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTAL 526
Query: 464 INMYMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGM 519
IN Y GD +K + + + + D+++++ LI+G A ++
Sbjct: 527 INAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEES 586
Query: 520 KPDHVTFVTALSACSH 535
P VT+ T + CS+
Sbjct: 587 VPSDVTYHTLIENCSN 602
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 144/341 (42%), Gaps = 47/341 (13%)
Query: 321 ALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGH 380
+LID HL AH + + N +A I S E +L+ + S
Sbjct: 148 SLIDKALSIVHLAQAHGFMPGVLSYN-AVLDATIRSKRNISFAENVFKEMLESQVS---- 202
Query: 381 QPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNL 440
PNV +++ +I GF G + +L LF +M+ PN VT++T++ +L ++
Sbjct: 203 ----PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDD 258
Query: 441 G-RELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGR----DLISWNSLI 495
G + L A++ L + N++ N +IN + G K+ V + R D +++N+LI
Sbjct: 259 GFKLLRSMALKGL-EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317
Query: 496 SGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRI 555
GY G AL EM++ G+ P +T+ + + + AG + QM R +
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM-RVRGL 376
Query: 556 EPTVEHYACLVDLLGRAGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETAS 615
P Y LVD + G + EA ++R M N + +
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREM--NDNGF---------------------SP 413
Query: 616 QILTLNSQITGSFMLLSNIYAANGRWEDSARVRISAKKKGL 656
++T N+ I G + G+ ED+ V K+KGL
Sbjct: 414 SVVTYNALING--------HCVTGKMEDAIAVLEDMKEKGL 446
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 106/535 (19%), Positives = 229/535 (42%), Gaps = 22/535 (4%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLD-HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFG 140
LI Y + + A + F + + I N++I + V G+ E A +Y + + G
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230
Query: 141 FFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDAC 200
+ +TL +++ A G E G + N L+ Y G ME+A
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290
Query: 201 QLFDGMPVR----TILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSH 256
+L + MP + + ++NT+++G + A +F M P+S T+ SLL
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 257 KRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYL 316
+ G ET ++F MR+R + ++S+ +D++ V + G
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 317 FVKNALIDTYRKHKHLGDAHNVFFDIKNK----NLESWNALISSYAESGLCEEAHAVLLQ 372
+ LI Y + + A N+ ++ + ++ ++N ++ + + EA + +
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 373 LEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVC 432
+ + + L P+ + + +I G G + ++ELF++M+ +++ + VT++T+L
Sbjct: 471 MTE-----RALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 433 AELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDL---- 488
++ ++ +E+ V + + + L+N G + V+D + +++
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTV 585
Query: 489 ISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQ 548
+ NS+I GY G + + ++MI G PD +++ T + ++ L +
Sbjct: 586 MICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKK 645
Query: 549 MVRE-FRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM---PIEPNEYIWGALLN 599
M E + P V Y ++ R ++EA ++R M + P+ + ++N
Sbjct: 646 MEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMIN 700
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 147/330 (44%), Gaps = 44/330 (13%)
Query: 311 GYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK----NLESWNALISSYAESGLCEEA 366
G D +F + LI TY + + L +AH F +++K ++++ NALI S G E A
Sbjct: 162 GSNDSVF--DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELA 219
Query: 367 HAVLLQLEKS-----------------LDG-------------HQPLRPNVISWSAVISG 396
V ++ +S DG + + P++++++ +IS
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA 279
Query: 397 FASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDN 456
++SKG EE+ EL M P T++TV++ + +E+ +R+ + +
Sbjct: 280 YSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPD 339
Query: 457 ILVGNGLINMYMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFD 512
L+ K GD + VF ++ R DL+ ++S++S + G D AL F+
Sbjct: 340 STTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFN 399
Query: 513 EMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRA 572
+ +AG+ PD+V + + G+++ NL +M+++ V + L L R
Sbjct: 400 SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRK 459
Query: 573 GLLQEANDIVRNM---PIEPNEYIWGALLN 599
+L EA+ + M + P+ Y L++
Sbjct: 460 -MLGEADKLFNEMTERALFPDSYTLTILID 488
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 100/525 (19%), Positives = 204/525 (38%), Gaps = 84/525 (16%)
Query: 45 DFFITLLQQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPF 104
+ + L + +++ SQ Y LI+ Y+ G + A ++ NA+P
Sbjct: 239 NIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPG 298
Query: 105 ERLDH-IPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTL-PLIIEACSHLGSSS 162
+ + +N++I HG +E A E++ M + G PD T L++EAC G
Sbjct: 299 KGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK-GDVV 357
Query: 163 LCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFD------------------ 204
V L + ++ ++ + G ++ A F+
Sbjct: 358 ETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILI 417
Query: 205 -----------GMPVRT----------ILSWNTMVSGYAFNHDCVGASRIFKRMELEDWR 243
M +R ++++NT++ G A ++F M
Sbjct: 418 QGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF 477
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREI 303
P+S T T L+ H + G +ELF+ M+ + + ++ V ++D ++EI
Sbjct: 478 PDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEI 537
Query: 304 HGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESW----NALISSYAE 359
++ + L++ HL +A V+ ++ +KN++ N++I Y
Sbjct: 538 WADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCR 597
Query: 360 SGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAK-- 417
SG + + LEK + + P+ IS++ +I GF + ++ L ++M+ +
Sbjct: 598 SGNASDGESF---LEKMIS--EGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGG 652
Query: 418 VKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGH 477
+ P+ T++++ LHG+ +N M + +V +I ++G
Sbjct: 653 LVPDVFTYNSI---------------LHGFCRQNQMKEAEVVLRKMI---------ERG- 687
Query: 478 LVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPD 522
D ++ +I+G+ A DEM++ G PD
Sbjct: 688 ------VNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPD 726
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 99.4 bits (246), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/433 (19%), Positives = 205/433 (47%), Gaps = 43/433 (9%)
Query: 177 RNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR----TILSWNTMVSGYAFNHDCVGASR 232
R+ ++N L+ + GR ++A +F+ + +++++ T+V+
Sbjct: 320 RSRTKLMNGLI----ERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLS 375
Query: 233 IFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCA 292
+ ++E +P+++ + +++++ G D+ +++F+ M+ GC+ +A +I
Sbjct: 376 LISKVEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYG 435
Query: 293 DVVEVDRSREIHGYVIKGGYEDYLFVKN-----ALIDTYRKHKHLGDAHNVFFDIKN--- 344
+ +++ S + +++ D + N L+ + + + +A N+ + +++
Sbjct: 436 KIGKLEESSRLLDMMLR----DEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGV 491
Query: 345 -KNLESWNALISSYAESG-LCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGC 402
++ ++N L +YA G C ++ ++ H ++PNV + +++G+ +G
Sbjct: 492 KPDVVTFNTLAKAYARIGSTCTAEDMIIPRML-----HNKVKPNVRTCGTIVNGYCEEGK 546
Query: 403 GEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYA-VRNLMDD-----N 456
EE+L F RM+ V PN F++++ LN+ ++ G V +LM++ +
Sbjct: 547 MEEALRFFYRMKELGVHPNLFVFNSLIK-----GFLNI-NDMDGVGEVVDLMEEFGVKPD 600
Query: 457 ILVGNGLINMYMKCGDFKKGHLVF-DNIEG---RDLISWNSLISGYGMHGLGDNALTTFD 512
++ + L+N + GD K+ ++ D +EG D+ +++ L GY G + A +
Sbjct: 601 VVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILN 660
Query: 513 EMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRA 572
+M K G++P+ V + +S AG + ++ +M + P + Y L+ G A
Sbjct: 661 QMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGFGEA 720
Query: 573 GLLQEANDIVRNM 585
+A +++++M
Sbjct: 721 KQPWKAEELLKDM 733
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/388 (19%), Positives = 168/388 (43%), Gaps = 52/388 (13%)
Query: 289 SVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE 348
+ C DV R++ ++G + +G ++ + N LI+ K + V + K+
Sbjct: 314 TTCGDVR--SRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFH 371
Query: 349 SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLE 408
S +LIS ++GL +P+ I ++A+I+ + G +++++
Sbjct: 372 SLLSLISKVEKNGL---------------------KPDTILFNAIINASSESGNLDQAMK 410
Query: 409 LFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRN-LMDDNILVGNGLINMY 467
+F +M+ + KP TF+T++ ++ L L +R+ ++ N N L+ +
Sbjct: 411 IFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAW 470
Query: 468 MKCGDFKKGHLVFDNIEG----RDLISWNSLISGYGMHGLGDNALTTFDEMIKAGM---- 519
++ + ++ D++++N+L Y G + T ++MI M
Sbjct: 471 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG----STCTAEDMIIPRMLHNK 526
Query: 520 -KPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLV-------DLLGR 571
KP+ T T ++ G + FY+M +E + P + + L+ D+ G
Sbjct: 527 VKPNVRTCGTIVNGYCEEGKMEEALRFFYRM-KELGVHPNLFVFNSLIKGFLNINDMDG- 584
Query: 572 AGLLQEANDIVRNMPIEPNEYIWGALLNSCRTHKDTKIVEETASQILT--LNSQITGSFM 629
+ E D++ ++P+ + L+N+ + D K EE + +L ++ I +F
Sbjct: 585 ---VGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIH-AFS 640
Query: 630 LLSNIYAANGRWEDSARVRISAKKKGLK 657
+L+ YA G E + ++ +K G++
Sbjct: 641 ILAKGYARAGEPEKAEQILNQMRKFGVR 668
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 142/358 (39%), Gaps = 50/358 (13%)
Query: 82 LIALYARFGSVSHAQKVFNAV-------PFERLDHIPLWNSIIRANVSHGYFEFAIEIYV 134
LI Y + G + + ++ + + P +R +I +++A + E A I
Sbjct: 430 LIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNI-----LVQAWCNQRKIEEAWNIVY 484
Query: 135 GMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLG 194
M+ +G PD T + +A + +GS+ C A ++ LH NK+
Sbjct: 485 KMQSYGVKPDVVTFNTLAKAYARIGST-------CTAEDMIIPRMLH--NKVKPN----- 530
Query: 195 RMEDACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLS 254
VRT T+V+GY A R F RM+ PN + SL+
Sbjct: 531 -------------VRTC---GTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIK 574
Query: 255 SHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYED 314
D E+ LM G + + +++ + V ++ R EI+ +++GG +
Sbjct: 575 GFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDP 634
Query: 315 YLFVKNALIDTYRKHKHLGDAHNVFFDIKN----KNLESWNALISSYAESGLCEEAHAVL 370
+ + L Y + A + ++ N+ + +IS + +G ++A
Sbjct: 635 DIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKA---- 690
Query: 371 LQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTV 428
+Q+ K + G L PN+ ++ +I GF ++ EL + M+ V P T +
Sbjct: 691 MQVYKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLI 748
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 182/433 (42%), Gaps = 46/433 (10%)
Query: 126 FEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNK 185
F+ I +Y M G D ++ ++I SL + ++LGFR + +
Sbjct: 95 FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS 154
Query: 186 LVGMYGKLGRMEDACQLFDGMP----VRTILSWNTMVSGYAFNHDCVGASRIFKRMELED 241
L+ + + R ++A L D M V ++ +NT+++G N D A +F ME +
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 242 WRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSR 301
R ++VT+ +L+S G + + L + M R + + +I + +R
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 302 EIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK----NLESWNALISSY 357
++ +I+ +F N+LI+ + H LGDA +F + +K ++ ++N LI+ +
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 358 AESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAK 417
+S E+ + ++ +Q L + +++ +I G+ G + ++F RM
Sbjct: 335 CKSKRVEDGMKLFCEMT-----YQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCG 389
Query: 418 VKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLI-NMYMKCGDFKKG 476
V P+ VT++ +L + L NG I + D +K
Sbjct: 390 VSPDIVTYNILL--------------------------DCLCNNGKIEKALVMVEDLQKS 423
Query: 477 HLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHA 536
+ D+I++N +I G A F + + G+KPD + ++T +S
Sbjct: 424 EM------DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 477
Query: 537 GLVAAGRNLFYQM 549
GL L +M
Sbjct: 478 GLQREADKLCRRM 490
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 134/294 (45%), Gaps = 22/294 (7%)
Query: 349 SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLE 408
+ +L++ + + +EA + L S+DG PNV+ ++ VI+G +LE
Sbjct: 151 TLGSLLNGFCQGNRFQEA----VSLVDSMDGFG-FVPNVVIYNTVINGLCKNRDLNNALE 205
Query: 409 LFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYM 468
+F M+ ++ + VT++T++S + L V+ +D N++ LI+ ++
Sbjct: 206 VFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFV 265
Query: 469 KCGDFKKGHLVFDNIEGRDLI----SWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHV 524
K G+ + ++ + R ++ ++NSLI+G+ +HG +A FD M+ G PD V
Sbjct: 266 KEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVV 325
Query: 525 TFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRN 584
T+ T ++ + V G LF +M + + Y L+ +AG L A +
Sbjct: 326 TYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFT-YNTLIHGYCQAGKLNVAQKVFNR 384
Query: 585 M---PIEPNEYIWGALL----NSCRTHKDTKIVE-----ETASQILTLNSQITG 626
M + P+ + LL N+ + K +VE E I+T N I G
Sbjct: 385 MVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 123/567 (21%), Positives = 232/567 (40%), Gaps = 91/567 (16%)
Query: 57 LQQARQLHSQTILTAAYRKPFLAAKLIALYARF--------GSVSHAQKVFNA-VPFERL 107
L Q R L + T+ TA + ++ Y R G VS+ +++ + V +
Sbjct: 4 LIQTRLLETGTLRTALF---------LSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKED 54
Query: 108 DHIPLWNSIIRANVSHGYFEFA---------------IEIYVGMRKFGFFPDGFTLPLII 152
D + L+ + R+ +F+ +++ M G + +TL ++I
Sbjct: 55 DAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 153 EACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGM------ 206
C SL ++LG+ + L+ GR+ +A +L D M
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 207 PVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETL 266
P T+++ N +V+G N A + RM ++PN VT+ +L + G +
Sbjct: 175 P--TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAM 232
Query: 267 ELFKLMRTRGCEISAEALAVVIS-VCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDT 325
EL + M R ++ A +++I +C D +D + + + G++ + + LI
Sbjct: 233 ELLRKMEERKIKLDAVKYSIIIDGLCKDG-SLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291
Query: 326 YRKHKHLGDAHNVFFD-IKNK---NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQ 381
+ D + D IK K ++ +++ALI + + G EA +L K + +
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE----ELHKEMI-QR 346
Query: 382 PLRPNVISWSAVISGF----------------ASKGCG-------------------EES 406
+ P+ ++++++I GF SKGCG ++
Sbjct: 347 GISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG 406
Query: 407 LELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINM 466
LELFR+M L V + VT++T++ EL L + +EL V + +I+ L++
Sbjct: 407 LELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDG 466
Query: 467 YMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPD 522
G+ +K +F+ IE D+ +N +I G D+A F + G+KPD
Sbjct: 467 LCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526
Query: 523 HVTFVTALSACSHAGLVAAGRNLFYQM 549
T+ + G ++ LF +M
Sbjct: 527 VKTYNIMIGGLCKKGSLSEADLLFRKM 553
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 164/409 (40%), Gaps = 80/409 (19%)
Query: 230 ASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVIS 289
A +F+ M RP + ++ L S R YD L+L K M +G + L+++I+
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 290 VCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLES 349
C ++ + G +IK GYE DT +
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEP---------DTV----------------------T 144
Query: 350 WNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLEL 409
++ LI+ G EA ++ ++ + GH +P +I+ +A+++G G +++ L
Sbjct: 145 FSTLINGLCLEGRVSEALELVDRMVEM--GH---KPTLITLNALVNGLCLNGKVSDAVLL 199
Query: 410 FRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMK 469
RM +PN VT+ VL V + L EL +R + + I +
Sbjct: 200 IDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMEL----LRKMEERKIKL---------- 245
Query: 470 CGDFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTA 529
D + ++ +I G G DNA F+EM G K D + + T
Sbjct: 246 -----------------DAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTL 288
Query: 530 LSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM---P 586
+ +AG G L M++ +I P V ++ L+D + G L+EA ++ + M
Sbjct: 289 IRGFCYAGRWDDGAKLLRDMIKR-KITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
Query: 587 IEPNEYIWGALLNS-CRTHK--------DTKIVEETASQILTLNSQITG 626
I P+ + +L++ C+ ++ D + + I T N I G
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILING 396
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/383 (18%), Positives = 148/383 (38%), Gaps = 45/383 (11%)
Query: 52 QQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLD-HI 110
Q ++ R++ + I A + + L + GS+ +A +FN + + I
Sbjct: 227 QTALAMELLRKMEERKIKLDAVKYSIIIDGL----CKDGSLDNAFNLFNEMEIKGFKADI 282
Query: 111 PLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCH 170
++ ++IR G ++ ++ M K PD +I+ G +H
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 171 ALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR----TILSWNTMVSGYAFNHD 226
++ G L+ + K +++ A + D M + I ++N +++GY +
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 227 CVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAV 286
+F++M L ++VT+ +L+ G + ELF+ M +R + +
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 287 VISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKN 346
++ D E +++ EI + K E + + N +I + DA ++F + K
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 347 LESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEES 406
+ +P+V +++ +I G KG E+
Sbjct: 523 V------------------------------------KPDVKTYNIMIGGLCKKGSLSEA 546
Query: 407 LELFRRMQLAKVKPNCVTFSTVL 429
LFR+M+ PN T++ ++
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILI 569
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/520 (20%), Positives = 224/520 (43%), Gaps = 54/520 (10%)
Query: 101 AVPFERLDHIPLW-------NSIIRANVSHGYFEFAIEIYVGMRKFGFFPD--GFT---- 147
A+ F RL + W I+R + F A++++ M + P FT
Sbjct: 21 ALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLN 80
Query: 148 -------LPLIIEACSHLGSSSLCRIVH-CHALELGF--RNHLHVVNKLVGMYGKLGRME 197
++I C HL + ++ C+ L F + ++ + +G KLG
Sbjct: 81 VIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEP 140
Query: 198 DACQLFDGMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHK 257
D I+++ ++++G+ + A + +M +P+ V +T+++ S
Sbjct: 141 D------------IVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLC 188
Query: 258 RCGLYDETLELFKLMRTRGCEISAEALAVVIS-VCADVVEVDRSREIHGYVIKGGYEDYL 316
+ G + L LF M G +++ +C D + G + D +
Sbjct: 189 KNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPD-V 247
Query: 317 FVKNALIDTYRKHKHLGDAHNVFFDIKN----KNLESWNALISSYAESGLCEEAHAVLLQ 372
NALID + K DA ++ ++ N+ ++ +LI+ + G +EA +
Sbjct: 248 ITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Query: 373 LEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVC 432
+E + P+V++++++I+GF ++++++F M + N +T++T++
Sbjct: 308 MET-----KGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGF 362
Query: 433 AELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGRDLI--- 489
++ N+ +E+ + V + NI N L++ G KK ++F++++ R++
Sbjct: 363 GQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVA 422
Query: 490 ----SWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNL 545
++N L+ G +G + AL F++M K M +T+ + AG V NL
Sbjct: 423 PNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNL 482
Query: 546 FYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM 585
F + + ++P V Y ++ L R GL EA+ + R M
Sbjct: 483 FCSLPSK-GVKPNVVTYTTMISGLFREGLKHEAHVLFRKM 521
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/352 (19%), Positives = 153/352 (43%), Gaps = 53/352 (15%)
Query: 110 IPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLG----SSSLCR 165
+ ++ +II + +G+ +A+ ++ M +G PD ++ + G + SL R
Sbjct: 177 VVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLR 236
Query: 166 IVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR-----TILSWNTMVSG 220
+ + + N L+ + K G+ DA +L++ M +R I ++ ++++G
Sbjct: 237 ----GMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM-IRMSIAPNIFTYTSLING 291
Query: 221 YAFNHDCVGASR-IFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEI 279
+ CV +R +F ME + P+ V +TSL++ +C D+ +++F M +G
Sbjct: 292 FCM-EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 280 SAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVF 339
+ +I V + + ++E+ +++ G + N L+ + + A +F
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIF 410
Query: 340 FDIKNK-------NLESWNALISSYAESGLCEEAHAVLLQLEK-SLDG------------ 379
D++ + N+ ++N L+ +G E+A V + K +D
Sbjct: 411 EDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGM 470
Query: 380 -----------------HQPLRPNVISWSAVISGFASKGCGEESLELFRRMQ 414
+ ++PNV++++ +ISG +G E+ LFR+M+
Sbjct: 471 CKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK 522
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/452 (23%), Positives = 206/452 (45%), Gaps = 65/452 (14%)
Query: 186 LVGMYGKLGRMEDACQLFDGMPVRTI----LSWNTMVSGYAFNHDCVGAS-RIFKRMELE 240
L+ + K G M+ A LF M R I ++++T++ GY F +G ++F + +
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGY-FKAGMLGMGHKLFSQALHK 350
Query: 241 DWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVIS-VCADVVEVDR 299
+ + V ++S + + + G ++K M +G + ++I +C D +
Sbjct: 351 GVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG-RIYE 409
Query: 300 SREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN----KNLESWNALIS 355
+ ++G ++K G E + ++LID + K +L ++ D+ ++ + L+
Sbjct: 410 AFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVD 469
Query: 356 SYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQL 415
++ GL A ++ + G Q +R NV+ ++++I G+ +E+L++FR M +
Sbjct: 470 GLSKQGLMLHA----MRFSVKMLG-QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524
Query: 416 AKVKPNCVTFSTVLSV-------CAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYM 468
+KP+ TF+TV+ V C + +G +L RN + +I V N +I++
Sbjct: 525 YGIKPDVATFTTVMRVSIMEDAFCKHMKP-TIGLQLFDLMQRNKISADIAVCNVVIHLLF 583
Query: 469 KCGDFKKGHLVFDN-IEGR---DLISWNSLISGYG------------------------- 499
KC + F+N IEG+ D++++N++I GY
Sbjct: 584 KCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTV 643
Query: 500 -----MHGLG-----DNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQM 549
+H L D A+ F M + G KP+ VT+ + S + + LF +M
Sbjct: 644 TLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEM 703
Query: 550 VREFRIEPTVEHYACLVDLLGRAGLLQEANDI 581
+E I P++ Y+ ++D L + G + EA +I
Sbjct: 704 -QEKGISPSIVSYSIIIDGLCKRGRVDEATNI 734
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 117/229 (51%), Gaps = 9/229 (3%)
Query: 385 PNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGREL 444
PNV+++ +I+GF +G + + +LF+ M+ ++P+ + +ST++ + L +G +L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 445 HGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNI--EG--RDLISWNSLISGYGM 500
A+ + +++V + I++Y+K GD +V+ + +G +++++ LI G
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 501 HGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVE 560
G A + +++K GM+P VT+ + + G + +G L+ M++ P V
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK-MGYPPDVV 462
Query: 561 HYACLVDLLGRAGLLQEANDIVRNM---PIEPNEYIWGALLNS-CRTHK 605
Y LVD L + GL+ A M I N ++ +L++ CR ++
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/406 (21%), Positives = 166/406 (40%), Gaps = 61/406 (15%)
Query: 211 ILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFK 270
I+S N ++ G + + V ASR+ + PN VT+ +L++ + G D +LFK
Sbjct: 252 IVSCNKVLKGLSVDQIEV-ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK 310
Query: 271 LMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHK 330
+M RG E L + LID Y K
Sbjct: 311 VMEQRGIEPD-----------------------------------LIAYSTLIDGYFKAG 335
Query: 331 HLGDAHNVFFDIKNKNLE----SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPN 386
LG H +F +K ++ +++ I Y +SG A V ++ Q + PN
Sbjct: 336 MLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRML-----CQGISPN 390
Query: 387 VISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHG 446
V++++ +I G G E+ ++ ++ ++P+ VT+S+++ + L G L+
Sbjct: 391 VVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYE 450
Query: 447 YAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHG 502
++ ++++ L++ K G + G+ +++ +NSLI G+
Sbjct: 451 DMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN 510
Query: 503 LGDNALTTFDEMIKAGMKPDHVTFVTALSA-------CSHAGLVAAGRNLFYQMVREFRI 555
D AL F M G+KPD TF T + C H G LF M R +I
Sbjct: 511 RFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMK-PTIGLQLFDLMQRN-KI 568
Query: 556 EPTVEHYACLVDLLGRAGLLQEANDIVRNM---PIEPNEYIWGALL 598
+ ++ LL + +++A+ N+ +EP+ + ++
Sbjct: 569 SADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 614
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 93/466 (19%), Positives = 190/466 (40%), Gaps = 28/466 (6%)
Query: 80 AKLIALYARFGSVSHAQKVFNAVPFE--RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMR 137
+ LI Y + G + K+F+ + +LD + +++S I V G A +Y M
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLD-VVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 138 KFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRME 197
G P+ T ++I+ G ++ L+ G + + L+ + K G +
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 198 DACQLFD-----GMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSL 252
L++ G P ++ + +V G + + A R +M + R N V + SL
Sbjct: 444 SGFALYEDMIKMGYPPDVVI-YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 253 LSSHKRCGLYDETLELFKLMRTRGCEISAEALAVV--ISVCADV----VEVDRSREIHGY 306
+ R +DE L++F+LM G + V +S+ D ++ ++
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDL 562
Query: 307 VIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE----SWNALISSYAESGL 362
+ + + V N +I K + DA F ++ +E ++N +I Y
Sbjct: 563 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 622
Query: 363 CEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNC 422
+EA + L+ + P PN ++ + +I + ++ +F M KPN
Sbjct: 623 LDEAERIFELLKVT-----PFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 677
Query: 423 VTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDN 482
VT+ ++ ++ + +L + +I+ + +I+ K G + +F
Sbjct: 678 VTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQ 737
Query: 483 -IEGR---DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHV 524
I+ + D++++ LI GY G A ++ M++ G+KPD +
Sbjct: 738 AIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDL 783
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/385 (19%), Positives = 158/385 (41%), Gaps = 57/385 (14%)
Query: 53 QCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLD-HIP 111
+C L+ L+ I + L+ ++ G + HA + + + + ++
Sbjct: 438 KCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVV 497
Query: 112 LWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEA-------CSHLGSSSLC 164
++NS+I F+ A++++ M +G PD T ++ C H+ +
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPT--- 554
Query: 165 RIVHCHALELGFRNHLH----VVNKLVGMYGKLGRMEDACQLF----DGMPVRTILSWNT 216
+ +L RN + V N ++ + K R+EDA + F +G I+++NT
Sbjct: 555 --IGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 612
Query: 217 MVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRG 276
M+ GY A RIF+ +++ + PN+VT T L+ + D + +F +M +G
Sbjct: 613 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKG 672
Query: 277 CEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAH 336
+ +A ++ + V+++ S ++ + + G + + +ID K + +A
Sbjct: 673 SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEAT 732
Query: 337 NVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISG 396
N+F +++D L P+V++++ +I G
Sbjct: 733 NIF----------------------------------HQAIDAK--LLPDVVAYAILIRG 756
Query: 397 FASKGCGEESLELFRRMQLAKVKPN 421
+ G E+ L+ M VKP+
Sbjct: 757 YCKVGRLVEAALLYEHMLRNGVKPD 781
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 177/414 (42%), Gaps = 41/414 (9%)
Query: 117 IRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGF 176
IR S GYF+ E+ +GM+ +G PD + I+ G V G
Sbjct: 278 IRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGI 337
Query: 177 RNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR-TILSWNTMVSGYAFNHDCVGASRIFK 235
V+ ++ + K+G+ E+A +L +R I +++ +S D + AS IF+
Sbjct: 338 SQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQ 397
Query: 236 RMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVV 295
+ P+ V +T+++ + G D+ + F + G S ++I C+
Sbjct: 398 EIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFG 457
Query: 296 EVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK----NKNLESWN 351
+ + + + G + + N L+ Y K L + +++ + ++ ++N
Sbjct: 458 SISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYN 517
Query: 352 ALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFR 411
LI S G +EA+ ++ +L + + P+ ++++ VI GF+ +G +E+ L+
Sbjct: 518 ILIHSMVVRGYIDEANEIISELIR-----RGFVPSTLAFTDVIGGFSKRGDFQEAFILWF 572
Query: 412 RMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCG 471
M ++KP+ VT C+ L LHGY M+ I++ N L++ +K
Sbjct: 573 YMADLRMKPDVVT-------CSAL--------LHGYCKAQRMEKAIVLFNKLLDAGLK-- 615
Query: 472 DFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVT 525
D++ +N+LI GY G + A M++ GM P+ T
Sbjct: 616 --------------PDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNEST 655
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 110/256 (42%), Gaps = 18/256 (7%)
Query: 353 LISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRR 412
I Y G ++ +L+ ++ H +RP++++++ I G +E+ + +
Sbjct: 277 FIRKYCSDGYFDKGWELLMGMK-----HYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFK 331
Query: 413 MQLAKVKPNCVTFSTVLS-VCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCG 471
++L + + V+ S+V+ C + +H + +R NI V + ++ G
Sbjct: 332 LKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR----PNIFVYSSFLSNICSTG 387
Query: 472 DFKKGHLVFDNIEG----RDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFV 527
D + +F I D + + ++I GY G D A F ++K+G P T
Sbjct: 388 DMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTST 447
Query: 528 TALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQ---EANDIVRN 584
+ ACS G ++ ++F M E ++ V Y L+ G+ L E D +R+
Sbjct: 448 ILIGACSRFGSISDAESVFRNMKTE-GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRS 506
Query: 585 MPIEPNEYIWGALLNS 600
I P+ + L++S
Sbjct: 507 AGISPDVATYNILIHS 522
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 136/351 (38%), Gaps = 54/351 (15%)
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVI-SVCADVVEVDRSRE 302
P+ SLL R + E + M +RG ++A L++ I C+D D+ E
Sbjct: 234 PSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGY-FDKGWE 292
Query: 303 IHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK----NKNLESWNALISSYA 358
+ + G + ID K L +A +V F +K +++ S +++I +
Sbjct: 293 LLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC 352
Query: 359 ESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKV 418
+ G EEA ++ LRPN+ +S+ +S S G + +F+ + +
Sbjct: 353 KVGKPEEAIKLIHSFR--------LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGL 404
Query: 419 KPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHL 478
P+CV ++T++ L + + G +++ ++ LI + G
Sbjct: 405 LPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAES 464
Query: 479 VFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACS 534
VF N++ D++++N+L+ GYG + DEM AG
Sbjct: 465 VFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG---------------- 508
Query: 535 HAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM 585
I P V Y L+ + G + EAN+I+ +
Sbjct: 509 --------------------ISPDVATYNILIHSMVVRGYIDEANEIISEL 539
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 91/414 (21%), Positives = 177/414 (42%), Gaps = 41/414 (9%)
Query: 117 IRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGF 176
IR S GYF+ E+ +GM+ +G PD + I+ G V G
Sbjct: 278 IRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGI 337
Query: 177 RNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR-TILSWNTMVSGYAFNHDCVGASRIFK 235
V+ ++ + K+G+ E+A +L +R I +++ +S D + AS IF+
Sbjct: 338 SQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQ 397
Query: 236 RMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVV 295
+ P+ V +T+++ + G D+ + F + G S ++I C+
Sbjct: 398 EIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFG 457
Query: 296 EVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK----NKNLESWN 351
+ + + + G + + N L+ Y K L + +++ + ++ ++N
Sbjct: 458 SISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYN 517
Query: 352 ALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFR 411
LI S G +EA+ ++ +L + + P+ ++++ VI GF+ +G +E+ L+
Sbjct: 518 ILIHSMVVRGYIDEANEIISELIR-----RGFVPSTLAFTDVIGGFSKRGDFQEAFILWF 572
Query: 412 RMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCG 471
M ++KP+ VT C+ L LHGY M+ I++ N L++ +K
Sbjct: 573 YMADLRMKPDVVT-------CSAL--------LHGYCKAQRMEKAIVLFNKLLDAGLK-- 615
Query: 472 DFKKGHLVFDNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVT 525
D++ +N+LI GY G + A M++ GM P+ T
Sbjct: 616 --------------PDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNEST 655
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 110/256 (42%), Gaps = 18/256 (7%)
Query: 353 LISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRR 412
I Y G ++ +L+ ++ H +RP++++++ I G +E+ + +
Sbjct: 277 FIRKYCSDGYFDKGWELLMGMK-----HYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFK 331
Query: 413 MQLAKVKPNCVTFSTVLS-VCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCG 471
++L + + V+ S+V+ C + +H + +R NI V + ++ G
Sbjct: 332 LKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR----PNIFVYSSFLSNICSTG 387
Query: 472 DFKKGHLVFDNIEG----RDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFV 527
D + +F I D + + ++I GY G D A F ++K+G P T
Sbjct: 388 DMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTST 447
Query: 528 TALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQ---EANDIVRN 584
+ ACS G ++ ++F M E ++ V Y L+ G+ L E D +R+
Sbjct: 448 ILIGACSRFGSISDAESVFRNMKTE-GLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRS 506
Query: 585 MPIEPNEYIWGALLNS 600
I P+ + L++S
Sbjct: 507 AGISPDVATYNILIHS 522
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/351 (20%), Positives = 136/351 (38%), Gaps = 54/351 (15%)
Query: 244 PNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVI-SVCADVVEVDRSRE 302
P+ SLL R + E + M +RG ++A L++ I C+D D+ E
Sbjct: 234 PSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGY-FDKGWE 292
Query: 303 IHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK----NKNLESWNALISSYA 358
+ + G + ID K L +A +V F +K +++ S +++I +
Sbjct: 293 LLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFC 352
Query: 359 ESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKV 418
+ G EEA ++ LRPN+ +S+ +S S G + +F+ + +
Sbjct: 353 KVGKPEEAIKLIHSFR--------LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGL 404
Query: 419 KPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHL 478
P+CV ++T++ L + + G +++ ++ LI + G
Sbjct: 405 LPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAES 464
Query: 479 VFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACS 534
VF N++ D++++N+L+ GYG + DEM AG
Sbjct: 465 VFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAG---------------- 508
Query: 535 HAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM 585
I P V Y L+ + G + EAN+I+ +
Sbjct: 509 --------------------ISPDVATYNILIHSMVVRGYIDEANEIISEL 539
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 107/517 (20%), Positives = 218/517 (42%), Gaps = 85/517 (16%)
Query: 210 TILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELF 269
T L++ M+ A + + ++M+L+ + + + S++S +++ GL + +E+F
Sbjct: 75 TPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMF 134
Query: 270 KLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKH 329
++ GC+ S + V+ + ++ + + G+E +F N L+ K+
Sbjct: 135 YRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKN 194
Query: 330 KHLGDAHNVFFDIKNK----NLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPL-- 383
+ A + ++ NK + S+ +ISS E GL +E + + E + + L
Sbjct: 195 NKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALIN 254
Query: 384 -----------------------RPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKP 420
PNVIS+S +I+ + G E + +M P
Sbjct: 255 GLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHP 314
Query: 421 NCVTFSTVLSVC----AELAALNLGREL-HGYAVRNLMDDNILVGNGLINMYMKCGDFKK 475
N T S+++ C AL+L ++ G+ ++ N++ N L+ + G+ K
Sbjct: 315 NIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQ----PNVVAYNTLVQGFCSHGNIVK 370
Query: 476 GHLVFDNIE----GRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALS 531
VF ++E ++ ++ SLI+G+ G D A+ +++M+ +G P+ V + +
Sbjct: 371 AVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVE 430
Query: 532 A-CSHA-----------------------------GLVAAGR-----NLFYQMVREFRIE 556
A C H+ GL AGR +F QM ++ R
Sbjct: 431 ALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCP 490
Query: 557 PTVEHYACLVDLLGRAGLLQEANDIVRNM---PIEPNEYIWGALLN-SCRTHKDTKIVEE 612
P + Y L+D L +A ++EA + R + +E + + LL+ SC ++
Sbjct: 491 PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQL 550
Query: 613 TASQILTLNS--QITGSFMLLSNIYAANGRWEDSARV 647
++ S +IT + ++L+ Y G+ E +A++
Sbjct: 551 VGKMMVDGKSPDEITMNMIILA--YCKQGKAERAAQM 585
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/433 (20%), Positives = 180/433 (41%), Gaps = 56/433 (12%)
Query: 110 IPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHC 169
+ ++N++I ++ A E+ M + G P+ + +I + G L
Sbjct: 246 VSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLT 305
Query: 170 HALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR------TILSWNTMVSGYAF 223
L+ G +++ ++ LV G DA L++ M +R ++++NT+V G+
Sbjct: 306 QMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQM-IRGFGLQPNVVAYNTLVQGFCS 364
Query: 224 NHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEA 283
+ + V A +F ME PN T+ SL++ + G D + ++ M T GC
Sbjct: 365 HGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGC------ 418
Query: 284 LAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIK 343
C +VV V +++ +H +A ++ +
Sbjct: 419 -------CPNVV----------------------VYTNMVEALCRHSKFKEAESLIEIMS 449
Query: 344 NKN----LESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFAS 399
+N + ++NA I ++G + A V Q+E+ PN+++++ ++ G A
Sbjct: 450 KENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQ----QHRCPPNIVTYNELLDGLAK 505
Query: 400 KGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILV 459
EE+ L R + + V+ + T++T+L + +L G + + + +
Sbjct: 506 ANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEIT 565
Query: 460 GNGLINMYMKCGDFKKGHLVFDNIE-GR-----DLISWNSLISGYGMHGLGDNALTTFDE 513
N +I Y K G ++ + D + GR D+IS+ ++I G ++ + +
Sbjct: 566 MNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLER 625
Query: 514 MIKAGMKPDHVTF 526
MI AG+ P T+
Sbjct: 626 MISAGIVPSIATW 638
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 145/370 (39%), Gaps = 62/370 (16%)
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHAL 172
++++I + G E A M K G P+ +TL +++ C G++ AL
Sbjct: 284 YSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTF-------DAL 336
Query: 173 EL--------GFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMP----VRTILSWNTMVSG 220
+L G + ++ N LV + G + A +F M I ++ ++++G
Sbjct: 337 DLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLING 396
Query: 221 YAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEIS 280
+A GA I+ +M PN V +T+++ + R + E L ++M C S
Sbjct: 397 FAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPS 456
Query: 281 AEALAVVISVCADVVEVDRSREIHGYVIKGGY-EDYLFVKNALIDTYRKHKHLGDAHNVF 339
I D +D + ++ + + + N L+D K + +A+ +
Sbjct: 457 VPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLT 516
Query: 340 FDIKNKNLE---------------------------------------SWNALISSYAES 360
+I + +E + N +I +Y +
Sbjct: 517 REIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQ 576
Query: 361 GLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKP 420
G E A A +L L G + RP+VIS++ VI G C E+ + L RM A + P
Sbjct: 577 GKAERA-AQMLDLVSC--GRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVP 633
Query: 421 NCVTFSTVLS 430
+ T+S +++
Sbjct: 634 SIATWSVLIN 643
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 190/462 (41%), Gaps = 25/462 (5%)
Query: 116 IIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSS-SLCRIVHCHALEL 174
+I A G E A+E + M++F PD FT +I+ L V+ L+
Sbjct: 133 LISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKC 192
Query: 175 GFRNHLHVVNKLV-GMYGKLGRMEDACQLFDGMPVRTI----LSWNTMVSGYAFNHDCVG 229
+L+ L+ G+Y K GR DA ++FD M R I +++ ++SG
Sbjct: 193 NCSPNLYTFGILMDGLYKK-GRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADD 251
Query: 230 ASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVIS 289
A ++F M+ P+SV +LL + G E EL +L G + + +I
Sbjct: 252 ARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLID 311
Query: 290 VCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLES 349
++ E++ ++K + + + LI K + DA + + +K +
Sbjct: 312 GLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISP 371
Query: 350 ----WNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEE 405
+NA+I + GL EE + LQLE S P+ + + +I G E
Sbjct: 372 DTYCYNAVIKALCGRGLLEEGRS--LQLEMS---ETESFPDACTHTILICSMCRNGLVRE 426
Query: 406 SLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGREL-HGYAVRNLMDDNILV---GN 461
+ E+F ++ + P+ TF+ ++ + L R L H V + + GN
Sbjct: 427 AEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGN 486
Query: 462 GLINMYMKCGDFKKGHLVF----DNIEGRDLISWNSLISGYGMHGLGDNALTTFDEMIKA 517
+ ++ G K + D D++S+N LI+G+ G D AL + +
Sbjct: 487 RSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLK 546
Query: 518 GMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTV 559
G+ PD VT+ T ++ G LFY +FR P V
Sbjct: 547 GLSPDSVTYNTLINGLHRVGREEEAFKLFYAK-DDFRHSPAV 587
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 159/384 (41%), Gaps = 61/384 (15%)
Query: 252 LLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGG 311
+LS C LY +TLE K + G + + V+IS A + +++ E G + +
Sbjct: 101 MLSEDNGCDLYWQTLEELK---SGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFD 157
Query: 312 YEDYLFVKNALIDTY-RKHKHLGDAHNVFFDIK----NKNLESWNALISSYAESGLCEEA 366
+F N ++ R+ A V+ ++ + NL ++ L+ + G +A
Sbjct: 158 CRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDA 217
Query: 367 HAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFS 426
+ + + + PN ++++ +ISG +G +++ +LF MQ + P+ V +
Sbjct: 218 QKMFDDMT-----GRGISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHN 272
Query: 427 TVLSVCAELAALNLGRELHGYAVRNLMD-DNILVG----NGLINMYMKCGDFKKGHLVFD 481
+L LGR + + + L + D ++G + LI+ + + + ++
Sbjct: 273 ALLD-----GFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYA 327
Query: 482 NIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAG 537
N+ + D+I + LI G G ++AL M G+ PD + + A G
Sbjct: 328 NMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRG 387
Query: 538 LVAAGRNLFYQM------------------------VRE-----FRIE-----PTVEHYA 563
L+ GR+L +M VRE IE P+V +
Sbjct: 388 LLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFN 447
Query: 564 CLVDLLGRAGLLQEANDIVRNMPI 587
L+D L ++G L+EA ++ M +
Sbjct: 448 ALIDGLCKSGELKEARLLLHKMEV 471
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 111/545 (20%), Positives = 228/545 (41%), Gaps = 42/545 (7%)
Query: 82 LIALYARFGSVSHAQKVFNAV------PFERLDHIPLWNSIIRANVSHGYFEFAIEIYVG 135
++ Y R G + A++ F + P R+ + S+I A + A+
Sbjct: 315 MVKFYGRRGDMHRARETFERMRARGITPTSRI-----YTSLIHAYAVGRDMDEALSCVRK 369
Query: 136 MRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGR 195
M++ G T +I+ S G + A + + + K++ + +
Sbjct: 370 MKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCN 429
Query: 196 MEDACQLFDGMPVRTILS----WNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTS 251
ME A L M I + ++TM+ GY D +FKR++ + P VT+
Sbjct: 430 MERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGC 489
Query: 252 LLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGG 311
L++ + + G + LE+ ++M+ G + + + +++I+ + + + + ++K G
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 312 YEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKN----KNLESWNALISSYAESGLCEEAH 367
+ + + N +I + ++ A +++ ++ +I YA+SG
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSG------ 603
Query: 368 AVLLQLEKSLDGHQPLR-----PNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNC 422
+ +SL+ +R P V +++ +I+G K E+++E+ M LA V N
Sbjct: 604 ----DMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANE 659
Query: 423 VTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDN 482
T++ ++ A + E +D +I L+ K G + V
Sbjct: 660 HTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKE 719
Query: 483 IEGRDL----ISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGL 538
+ R++ +N LI G+ G A +M K G+KPD T+ + +SACS AG
Sbjct: 720 MSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGD 779
Query: 539 VAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEA---NDIVRNMPIEPNEYIWG 595
+ +M ++P ++ Y L+ RA L ++A + ++ M I+P++ ++
Sbjct: 780 MNRATQTIEEM-EALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYH 838
Query: 596 ALLNS 600
LL S
Sbjct: 839 CLLTS 843
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/400 (19%), Positives = 164/400 (41%), Gaps = 16/400 (4%)
Query: 82 LIALYARFGSVSHAQKVFNAVPFERLDH-IPLWNSIIRANVSHGYFEFAIEIYVGMRKFG 140
LI LY + G +S A +V + E + H + ++ +I V + A ++ M K G
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 141 FFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDAC 200
PD II A +G+ +L R ++ Y K G M +
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSL 609
Query: 201 QLFDGMP----VRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSH 256
++FD M V T+ ++N +++G A I M L N T+T ++ +
Sbjct: 610 EVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGY 669
Query: 257 KRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYL 316
G + E F ++ G ++ ++ C + + + +
Sbjct: 670 ASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNS 729
Query: 317 FVKNALIDTYRKHKHLGDAHNVFFDIKNK----NLESWNALISSYAESGLCEEAHAVLLQ 372
FV N LID + + + +A ++ +K + ++ ++ + IS+ +++G A + +
Sbjct: 730 FVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEE 789
Query: 373 LEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVC 432
+E ++PN+ +++ +I G+A E++L + M+ +KP+ + +L+
Sbjct: 790 MEA-----LGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 844
Query: 433 AELAALNLGRELHGYAV--RNLMDDNILVGNGLINMYMKC 470
A++ G + +++ ++V G + KC
Sbjct: 845 LSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKC 884
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 181/416 (43%), Gaps = 53/416 (12%)
Query: 211 ILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFK 270
++ +++ + Y + D AS ++KRM + PN VT+T L+ + G E ++
Sbjct: 356 VVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYG 415
Query: 271 LMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHK 330
+ RG E S + +I + ++ +IK GY + + L+D K
Sbjct: 416 QILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQG 475
Query: 331 HLGDAHNVFFDIK------NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLR 384
+ H + F +K N+ +N+LI + +EA V L G ++
Sbjct: 476 LM--LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVF-----RLMGIYGIK 528
Query: 385 PNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGREL 444
P+V +++ V+ +G EE+L LF RM ++P+ + + T++ + +G +L
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQL 588
Query: 445 HGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDN-IEGR---DLISWNSLISGYG- 499
RN + +I V N +I++ KC + F+N IEG+ D++++N++I GY
Sbjct: 589 FDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCS 648
Query: 500 -----------------------------MHGLG-----DNALTTFDEMIKAGMKPDHVT 525
+H L D A+ F M + G KP+ VT
Sbjct: 649 LRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVT 708
Query: 526 FVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDI 581
+ + S + + LF +M +E I P++ Y+ ++D L + G + EA +I
Sbjct: 709 YGCLMDWFSKSVDIEGSFKLFEEM-QEKGISPSIVSYSIIIDGLCKRGRVDEATNI 763
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 117/229 (51%), Gaps = 9/229 (3%)
Query: 385 PNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGREL 444
PNV+++ +I+GF +G + + +LF+ M+ ++P+ + +ST++ + L +G +L
Sbjct: 284 PNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKL 343
Query: 445 HGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNI--EG--RDLISWNSLISGYGM 500
A+ + +++V + I++Y+K GD +V+ + +G +++++ LI G
Sbjct: 344 FSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQ 403
Query: 501 HGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVE 560
G A + +++K GM+P VT+ + + G + +G L+ M++ P V
Sbjct: 404 DGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIK-MGYPPDVV 462
Query: 561 HYACLVDLLGRAGLLQEANDIVRNM---PIEPNEYIWGALLNS-CRTHK 605
Y LVD L + GL+ A M I N ++ +L++ CR ++
Sbjct: 463 IYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNR 511
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 179/404 (44%), Gaps = 28/404 (6%)
Query: 211 ILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFK 270
I+S N ++ G + + V ASR+ + PN VT+ +L++ + G D +LFK
Sbjct: 252 IVSCNKVLKGLSVDQIEV-ASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFK 310
Query: 271 LMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHK 330
+M RG E A + +I + ++ + G + + V ++ ID Y K
Sbjct: 311 VMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 331 HLGDAHNVFFDIK----NKNLESWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPN 386
L A V+ + + N+ ++ LI + G EA + Q+ K + + P+
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK-----RGMEPS 425
Query: 387 VISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAE----LAALNLGR 442
++++S++I GF G L+ M P+ V + ++ ++ L A+
Sbjct: 426 IVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSV 485
Query: 443 ELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFD--NIEG--RDLISWNSLISGY 498
++ G ++R N++V N LI+ + + F + VF I G D+ ++ +++
Sbjct: 486 KMLGQSIRL----NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVS 541
Query: 499 GMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSA-CSHAGLVAAGRNLFYQMVREFRIEP 557
M G + AL F M K G++PD + + T + A C H G LF M R +I
Sbjct: 542 IMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK-PTIGLQLFDLMQRN-KISA 599
Query: 558 TVEHYACLVDLLGRAGLLQEANDIVRNM---PIEPNEYIWGALL 598
+ ++ LL + +++A+ N+ +EP+ + ++
Sbjct: 600 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMI 643
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 105/519 (20%), Positives = 208/519 (40%), Gaps = 41/519 (7%)
Query: 80 AKLIALYARFGSVSHAQKVFNAVPFE--RLDHIPLWNSIIRANVSHGYFEFAIEIYVGMR 137
+ LI Y + G + K+F+ + +LD + +++S I V G A +Y M
Sbjct: 325 STLIDGYFKAGMLGMGHKLFSQALHKGVKLD-VVVFSSTIDVYVKSGDLATASVVYKRML 383
Query: 138 KFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRME 197
G P+ T ++I+ G ++ L+ G + + L+ + K G +
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 198 DACQLFD-----GMPVRTILSWNTMVSGYAFNHDCVGASRIFKRMELEDWRPNSVTWTSL 252
L++ G P ++ + +V G + + A R +M + R N V + SL
Sbjct: 444 SGFALYEDMIKMGYPPDVVI-YGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 253 LSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGY 312
+ R +DE L++F+LM G + V+ V ++ + + + K G
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGL 562
Query: 313 EDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNALISSYAESGLCEEAHAVLLQ 372
E LID + KH +F D+ +N S A+ +C +L +
Sbjct: 563 EPDALAYCTLIDAFCKHMKPTIGLQLF-DLMQRNKIS--------ADIAVCNVVIHLLFK 613
Query: 373 LEKSLDGHQ--------PLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVT 424
+ D + + P++++++ +I G+ S +E+ +F +++ PN VT
Sbjct: 614 CHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVT 673
Query: 425 FSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNIE 484
+ ++ V + ++ + N + L++ + K D + +F+ ++
Sbjct: 674 LTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQ 733
Query: 485 GR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVA 540
+ ++S++ +I G G D A F + I A + PD V + + G +
Sbjct: 734 EKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLV 793
Query: 541 AGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEAN 579
L+ M+R ++P DLL RA L E N
Sbjct: 794 EAALLYEHMLRN-GVKPD--------DLLQRA--LSEYN 821
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 91/485 (18%), Positives = 198/485 (40%), Gaps = 18/485 (3%)
Query: 53 QCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLD-HIP 111
+ L +L SQ + + + I +Y + G ++ A V+ + + + ++
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 112 LWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHA 171
+ +I+ G A +Y + K G P T +I+ G+ ++
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 172 LELGFRNHLHVVNKLVGMYGKLGRMEDACQL---FDGMPVR-TILSWNTMVSGYAFNHDC 227
+++G+ + + LV K G M A + G +R ++ +N+++ G+ +
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 228 VGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVV 287
A ++F+ M + +P+ T+T+++ G +E L LF M G E A A +
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTL 572
Query: 288 ISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNL 347
I ++ ++ + + + V N +I K + DA F ++ +
Sbjct: 573 IDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM 632
Query: 348 E----SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCG 403
E ++N +I Y +EA + L+ + P PN ++ + +I
Sbjct: 633 EPDIVTYNTMICGYCSLRRLDEAERIFELLKVT-----PFGPNTVTLTILIHVLCKNNDM 687
Query: 404 EESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGL 463
+ ++ +F M KPN VT+ ++ ++ + +L + +I+ + +
Sbjct: 688 DGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSII 747
Query: 464 INMYMKCGDFKKGHLVFDN-IEGR---DLISWNSLISGYGMHGLGDNALTTFDEMIKAGM 519
I+ K G + +F I+ + D++++ LI GY G A ++ M++ G+
Sbjct: 748 IDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 807
Query: 520 KPDHV 524
KPD +
Sbjct: 808 KPDDL 812
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 99/449 (22%), Positives = 187/449 (41%), Gaps = 17/449 (3%)
Query: 116 IIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELG 175
+ R V +G FE + ++ M K G D + + + A LC + ++ G
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSG 219
Query: 176 FRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTI----LSWNTMVSGYAFNHDCVGAS 231
+ ++ + +V + G +E + +L V+ I ++NT+++ Y D G
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVE 279
Query: 232 RIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVC 291
+ K M+ + N VT+T L+ + G + +LF MR RG E +IS
Sbjct: 280 GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWN 339
Query: 292 ADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE--- 348
+ R+ + + + G + ALID K +G A + ++++K +
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQ 399
Query: 349 -SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESL 407
+N LI Y G+ +EA + +E + + +V + + + S F +E+
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVME-----QKGFQADVFTCNTIASCFNRLKRYDEAK 454
Query: 408 ELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMY 467
+ RM VK + V+++ ++ V + + + L + N + N +I Y
Sbjct: 455 QWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAY 514
Query: 468 MKCGDFKKGHLVFDNIEGR----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDH 523
K G K+ + N+E D ++ SLI G + D A+ F EM G+ +
Sbjct: 515 CKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNS 574
Query: 524 VTFVTALSACSHAGLVAAGRNLFYQMVRE 552
VT+ +S S AG L+ +M R+
Sbjct: 575 VTYTVMISGLSKAGKSDEAFGLYDEMKRK 603
Score = 79.7 bits (195), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 155/353 (43%), Gaps = 16/353 (4%)
Query: 88 RFGSVSHAQKVFNAVPFERLD-HIPLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGF 146
R G V ++K+ + + +N+II A V F + M+K G +
Sbjct: 236 RRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKV 295
Query: 147 TLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGM 206
T L++E G S + E G + +HV L+ + G M+ A LFD +
Sbjct: 296 TYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDEL 355
Query: 207 PVRTILSWNTMVSGYAFNHDC----VGASRIF-KRMELEDWRPNSVTWTSLLSSHKRCGL 261
+ LS ++ G + C +GA+ I M+ + V + +L+ + R G+
Sbjct: 356 TEKG-LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGM 414
Query: 262 YDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNA 321
DE ++ +M +G + + S + D +++ +++GG +
Sbjct: 415 VDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTN 474
Query: 322 LIDTYRKHKHLGDAHNVFFDIKNKNLE----SWNALISSYAESGLCEEAHAVLLQLEKSL 377
LID Y K ++ +A +F ++ +K ++ ++N +I +Y + G +EA + +E +
Sbjct: 475 LIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEAN- 533
Query: 378 DGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLS 430
+ P+ +++++I G +E++ LF M L + N VT++ ++S
Sbjct: 534 ----GMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMIS 582
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 4/205 (1%)
Query: 112 LWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHA 171
++N++I G + A IY M + GF D FT I + L +
Sbjct: 401 VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM 460
Query: 172 LELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVRTI----LSWNTMVSGYAFNHDC 227
+E G + L+ +Y K G +E+A +LF M + + +++N M+ Y
Sbjct: 461 MEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKI 520
Query: 228 VGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVV 287
A ++ ME P+S T+TSL+ DE + LF M +G + ++ V+
Sbjct: 521 KEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVM 580
Query: 288 ISVCADVVEVDRSREIHGYVIKGGY 312
IS + + D + ++ + + GY
Sbjct: 581 ISGLSKAGKSDEAFGLYDEMKRKGY 605
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/289 (20%), Positives = 123/289 (42%), Gaps = 21/289 (7%)
Query: 383 LRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGR 442
++ V S + V+ G +G E+S +L + + +KP T++T+++ + R
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVK------QR 273
Query: 443 ELHGY-AVRNLMDDNILVGNG-----LINMYMKCGDFKKGHLVFDNIEGR----DLISWN 492
+ G V +M + +V N L+ + +K G +FD + R D+ +
Sbjct: 274 DFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYT 333
Query: 493 SLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTALSACSHAGLVAAGRNLFYQMVRE 552
SLIS G A FDE+ + G+ P T+ + G + A L +M +
Sbjct: 334 SLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEM-QS 392
Query: 553 FRIEPTVEHYACLVDLLGRAGLLQEAN---DIVRNMPIEPNEYIWGALLNSCRTHKDTKI 609
+ T + L+D R G++ EA+ D++ + + + + + K
Sbjct: 393 KGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDE 452
Query: 610 VEETASQILTLNSQI-TGSFMLLSNIYAANGRWEDSARVRISAKKKGLK 657
++ +++ ++ T S+ L ++Y G E++ R+ + KG++
Sbjct: 453 AKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQ 501
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 114/536 (21%), Positives = 219/536 (40%), Gaps = 86/536 (16%)
Query: 76 PFLAAKLIALYARFGSVSHAQKVFNAVPFERLDHI-PLWNSIIRANVSHGYFEFAIEIYV 134
PFL ++I + +R + +P +R D + + +S++++NV HG + I +
Sbjct: 133 PFLYNRIILILSR-----------SNLP-DRFDRVRSILDSMVKSNV-HGNIS-TVNILI 178
Query: 135 G--------------MRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHL 180
G ++K+ + FT +++A S V+C G + +
Sbjct: 179 GFFGNTEDLQMCLRLVKKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDI 238
Query: 181 HVVNKLVGMYGKLGRMEDACQLFDGMPVRTI----LSWNTMVSGYAFNHDCVGASRIFKR 236
N L+ L + E ACQ+F+ M R ++ M+ C A +F
Sbjct: 239 FAYNMLLD---ALAKDEKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNE 295
Query: 237 MELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVC---AD 293
M E N V + +L+ + + D+ +++F M GC + ++++++
Sbjct: 296 MITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQ 355
Query: 294 VVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLESWNAL 353
+V +D EI + G YL + T K H+ +AH +F D+ W+
Sbjct: 356 LVRLDGVVEISKRYMTQGIYSYL------VRTLSKLGHVSEAHRLFCDM-------WSF- 401
Query: 354 ISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRM 413
P++ S+ +++ G E++E+ ++
Sbjct: 402 ----------------------------PVKGERDSYMSMLESLCGAGKTIEAIEMLSKI 433
Query: 414 QLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLINMYMKCGDF 473
V + + ++TV S +L ++ +L ++ +I N LI + + G+
Sbjct: 434 HEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEV 493
Query: 474 KKGHLVFDNIE----GRDLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTFVTA 529
+ +F+ +E D+IS+NSLI+ G +G D A F EM + G+ PD VT+ T
Sbjct: 494 DEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVVTYSTL 553
Query: 530 LSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIVRNM 585
+ V +LF +M+ + +P + Y L+D L + G EA D+ M
Sbjct: 554 MECFGKTERVEMAYSLFEEMLVK-GCQPNIVTYNILLDCLEKNGRTAEAVDLYSKM 608
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/387 (18%), Positives = 172/387 (44%), Gaps = 26/387 (6%)
Query: 52 QQCSTLQQARQLHSQTILTAAYRKPFLAAKLIALYARFGSVSHAQKVFNAVPFERLD-HI 110
+ C + ++ H + R + +I R G A +FN + E L ++
Sbjct: 253 KACQVFEDMKKRHCR-------RDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNV 305
Query: 111 PLWNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSLCRIVHCH 170
+N++++ + AI+++ M + G P+ +T L++ + L R+
Sbjct: 306 VGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLL--VAEGQLVRLDG-- 361
Query: 171 ALELGFRNHLH-VVNKLVGMYGKLGRMEDACQLFDGM---PVRTIL-SWNTMVSGYAFNH 225
+E+ R + + LV KLG + +A +LF M PV+ S+ +M+
Sbjct: 362 VVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAG 421
Query: 226 DCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALA 285
+ A + ++ + +++ + ++ S+ + +LF+ M+ G
Sbjct: 422 KTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYN 481
Query: 286 VVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK 345
++I+ V EVD + I + + + + N+LI+ K+ + +AH F +++ K
Sbjct: 482 ILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEK 541
Query: 346 NLE----SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKG 401
L +++ L+ + ++ E A+++ ++ + G QP N+++++ ++ G
Sbjct: 542 GLNPDVVTYSTLMECFGKTERVEMAYSLFEEM--LVKGCQP---NIVTYNILLDCLEKNG 596
Query: 402 CGEESLELFRRMQLAKVKPNCVTFSTV 428
E+++L+ +M+ + P+ +T++ +
Sbjct: 597 RTAEAVDLYSKMKQQGLTPDSITYTVL 623
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 171/363 (47%), Gaps = 15/363 (4%)
Query: 233 IFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCA 292
++K M +PN T+ ++++ + G ++ ++ + M+ GC + + +I
Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYC 269
Query: 293 DVV---EVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNKNLE- 348
+ ++ ++ + +++ L N LID + K +L + VF ++ +++++
Sbjct: 270 KLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKP 329
Query: 349 ---SWNALISSYAESGLCEEAHAVLLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEE 405
S+N+LI+ G EA ++ ++ + ++PN+I+++A+I+GF +E
Sbjct: 330 NVISYNSLINGLCNGGKISEAISMRDKMVSA-----GVQPNLITYNALINGFCKNDMLKE 384
Query: 406 SLELFRRMQLAKVKPNCVTFSTVLSVCAELAALNLGRELHGYAVRNLMDDNILVGNGLIN 465
+L++F ++ P ++ ++ +L ++ G L R + ++ N LI
Sbjct: 385 ALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIA 444
Query: 466 MYMKCGDFKKGHLVFDNIEGR---DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPD 522
+ G+ + +FD + + DL++++ L+ GY G A EM K G+KP
Sbjct: 445 GLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPR 504
Query: 523 HVTFVTALSACSHAGLVAAGRNLFYQMVREFRIEPTVEHYACLVDLLGRAGLLQEANDIV 582
H+T+ + G + A N+ QM +E R+ V Y L+ + G L++AN ++
Sbjct: 505 HLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLL 564
Query: 583 RNM 585
M
Sbjct: 565 NEM 567
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/468 (21%), Positives = 208/468 (44%), Gaps = 42/468 (8%)
Query: 86 YARFGSVSHAQKVFNAVPFERLDHIPLWNSIIR-----ANVSHGYFEFAIEIYVGMRKFG 140
+ R GS +F+A+ D++ + NSII A ++ FE E + +G
Sbjct: 127 FVRNGSDHQVHSIFHAISM--CDNVCV-NSIIADMLVLAYANNSRFELGFEAFKRSGYYG 183
Query: 141 FFPDGFTLPLIIEACSHLGSSSLCRIVHCHALELGFRNHLHVVNKLVGMYGKLGRMEDAC 200
+ + ++ A S+ V+ + + ++ N ++ K G+M A
Sbjct: 184 YKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKAR 243
Query: 201 QLFDGMPV----RTILSWNTMVSGY---AFNHDCVGASRIFKRMELEDWRPNSVTWTSLL 253
+ + M V ++S+NT++ GY N A + K M D PN T+ L+
Sbjct: 244 DVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILI 303
Query: 254 SSHKRCGLYDETLELFKLMRTRGCEISAEALAVVISVCADVVEVDRSREIHGYVIKGGYE 313
+ ++++FK M + + + + +I+ + ++ + + ++ G +
Sbjct: 304 DGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQ 363
Query: 314 DYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK----NLESWNALISSYAESGLCEEAHAV 369
L NALI+ + K+ L +A ++F +K + +N LI +Y + G ++ A+
Sbjct: 364 PNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFAL 423
Query: 370 LLQLEKSLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTVL 429
++E+ + + P+V +++ +I+G G E + +LF ++ +K P+ VTF ++
Sbjct: 424 KEEMER-----EGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT-SKGLPDLVTFHILM 477
Query: 430 -SVCAE---LAALNLGRELH--GYAVRNLMDDNILVGNGLINMYMKCGDFKKGHLVFDNI 483
C + A L +E+ G R+L + ++ G Y K G+ K + +
Sbjct: 478 EGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKG------YCKEGNLKAATNMRTQM 531
Query: 484 EGR-----DLISWNSLISGYGMHGLGDNALTTFDEMIKAGMKPDHVTF 526
E ++ S+N L+ GY G ++A +EM++ G+ P+ +T+
Sbjct: 532 EKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITY 579
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/357 (17%), Positives = 144/357 (40%), Gaps = 41/357 (11%)
Query: 113 WNSIIRANVSHGYFEFAIEIYVGMRKFGFFPDGFTLPLIIEACSHLGSSSL---CRIVHC 169
+N +I A G A ++ M+ +G P+ + +I+ LG + V
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285
Query: 170 HALELGFRNHLHVVNKLVGMYGKLGRMEDACQLFDGMPVR----TILSWNTMVSGYAFNH 225
+E +L N L+ + K + + ++F M + ++S+N++++G
Sbjct: 286 EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGG 345
Query: 226 DCVGASRIFKRMELEDWRPNSVTWTSLLSSHKRCGLYDETLELFKLMRTRGCEISAEALA 285
A + +M +PN +T+ +L++ + + E L++F ++ +G +
Sbjct: 346 KISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYN 405
Query: 286 VVISVCADVVEVDRSREIHGYVIKGGYEDYLFVKNALIDTYRKHKHLGDAHNVFFDIKNK 345
++I + ++D + + + G + N LI ++ ++ A +F + +K
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSK 465
Query: 346 NLE---SWNALISSYAESGLCEEAHAVLLQLEK--------------------------- 375
L +++ L+ Y G +A +L ++ K
Sbjct: 466 GLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAAT 525
Query: 376 ----SLDGHQPLRPNVISWSAVISGFASKGCGEESLELFRRMQLAKVKPNCVTFSTV 428
++ + LR NV S++ ++ G++ KG E++ L M + PN +T+ V
Sbjct: 526 NMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582