Miyakogusa Predicted Gene

Lj3g3v0306960.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0306960.1 Non Chatacterized Hit- tr|I3SZR7|I3SZR7_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.18,0,no
description,Coproporphyrinogen III oxidase, aerobic;
Coprogen_oxidas,Coproporphyrinogen III
oxida,NODE_32640_length_892_cov_85.319504.path2.1
         (275 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G03475.1 | Symbols: LIN2, HEMF1, ATCPO-I | Coproporphyrinogen...   383   e-107
AT4G03205.2 | Symbols: hemf2 | Coproporphyrinogen III oxidase | ...   315   2e-86
AT4G03205.1 | Symbols: hemf2 | Coproporphyrinogen III oxidase | ...   314   4e-86

>AT1G03475.1 | Symbols: LIN2, HEMF1, ATCPO-I | Coproporphyrinogen
           III oxidase | chr1:869302-871175 REVERSE LENGTH=386
          Length = 386

 Score =  383 bits (983), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 189/229 (82%), Positives = 205/229 (89%), Gaps = 3/229 (1%)

Query: 49  TKTMRSKKSV-VRATVSIEKETPEAERPETFLRGGDAAT-AAESLSVRARFEKMIREAQD 106
           ++ +R+K ++ +R +VSIEKE PE ERP TFLR  D  T ++ S SVRARFE MIR AQD
Sbjct: 34  SRPIRNKPNLALRCSVSIEKEVPETERPFTFLRDSDDVTPSSSSSSVRARFETMIRAAQD 93

Query: 107 SVCDAIEAADGGGKFKEDVWSRPGGGGGISRVLQDGVVWEKAGVNVSVVYGVMPPDAYRA 166
           SVCDAIEA +GG KFKEDVWSRPGGGGGISRVLQDG V+EKAGVNVSVVYGVMPP+AYRA
Sbjct: 94  SVCDAIEAIEGGPKFKEDVWSRPGGGGGISRVLQDGNVFEKAGVNVSVVYGVMPPEAYRA 153

Query: 167 AKGSA-DQKPGPVPFFAAGISSVLHPKNPHAPTLHFNYRYFETDAPKDAPGAPRQWWFGG 225
           AKGSA DQKPGPVPFFAAG+SSVLHPKNP APTLHFNYRYFETDAPKD PGAPRQWWFGG
Sbjct: 154 AKGSASDQKPGPVPFFAAGVSSVLHPKNPFAPTLHFNYRYFETDAPKDVPGAPRQWWFGG 213

Query: 226 GTDLTPAYIFEEDVKHFHSTQKRACDKFDPTFYPRFKKWCDDYFYIKHR 274
           GTD TPAYIFEEDVKHFHS QK+ACDKFDP+FYPRFKKWCDDYFYIKHR
Sbjct: 214 GTDFTPAYIFEEDVKHFHSIQKQACDKFDPSFYPRFKKWCDDYFYIKHR 262


>AT4G03205.2 | Symbols: hemf2 | Coproporphyrinogen III oxidase |
           chr4:1412814-1413703 FORWARD LENGTH=240
          Length = 240

 Score =  315 bits (807), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 152/191 (79%), Positives = 165/191 (86%), Gaps = 2/191 (1%)

Query: 59  VRATVSIEKETPEAERPETFLRGGDA-ATAAESLSVRARFEKMIREAQDSVCDAIEAADG 117
           +R +VSIEKE PE ERP TFLR  D   T + S SVRARFEKMIR AQD VC+AIEA + 
Sbjct: 45  LRCSVSIEKEVPETERPFTFLRVSDGDQTQSSSYSVRARFEKMIRTAQDKVCEAIEAVEE 104

Query: 118 GGKFKEDVWSRPGGGGGISRVLQDGVVWEKAGVNVSVVYGVMPPDAYRAAKG-SADQKPG 176
           G KFKEDVWSRPGGGGGISR+LQDG VWEKAGVNVSV+YGVMPP+AYRAAK  +++QKPG
Sbjct: 105 GPKFKEDVWSRPGGGGGISRILQDGNVWEKAGVNVSVIYGVMPPEAYRAAKAATSEQKPG 164

Query: 177 PVPFFAAGISSVLHPKNPHAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGTDLTPAYIFE 236
           P+PFFAAG SSVLHP+NP APTLHFNYRYFETDAPKD PGAPRQWWFGGGTD TPAYIFE
Sbjct: 165 PIPFFAAGTSSVLHPQNPFAPTLHFNYRYFETDAPKDVPGAPRQWWFGGGTDFTPAYIFE 224

Query: 237 EDVKHFHSTQK 247
           EDVKHFHS  K
Sbjct: 225 EDVKHFHSVVK 235


>AT4G03205.1 | Symbols: hemf2 | Coproporphyrinogen III oxidase |
           chr4:1412814-1413765 FORWARD LENGTH=233
          Length = 233

 Score =  314 bits (805), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 151/189 (79%), Positives = 164/189 (86%), Gaps = 2/189 (1%)

Query: 59  VRATVSIEKETPEAERPETFLRGGDA-ATAAESLSVRARFEKMIREAQDSVCDAIEAADG 117
           +R +VSIEKE PE ERP TFLR  D   T + S SVRARFEKMIR AQD VC+AIEA + 
Sbjct: 45  LRCSVSIEKEVPETERPFTFLRVSDGDQTQSSSYSVRARFEKMIRTAQDKVCEAIEAVEE 104

Query: 118 GGKFKEDVWSRPGGGGGISRVLQDGVVWEKAGVNVSVVYGVMPPDAYRAAKG-SADQKPG 176
           G KFKEDVWSRPGGGGGISR+LQDG VWEKAGVNVSV+YGVMPP+AYRAAK  +++QKPG
Sbjct: 105 GPKFKEDVWSRPGGGGGISRILQDGNVWEKAGVNVSVIYGVMPPEAYRAAKAATSEQKPG 164

Query: 177 PVPFFAAGISSVLHPKNPHAPTLHFNYRYFETDAPKDAPGAPRQWWFGGGTDLTPAYIFE 236
           P+PFFAAG SSVLHP+NP APTLHFNYRYFETDAPKD PGAPRQWWFGGGTD TPAYIFE
Sbjct: 165 PIPFFAAGTSSVLHPQNPFAPTLHFNYRYFETDAPKDVPGAPRQWWFGGGTDFTPAYIFE 224

Query: 237 EDVKHFHST 245
           EDVKHFHS 
Sbjct: 225 EDVKHFHSV 233