Miyakogusa Predicted Gene

Lj3g3v0300670.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0300670.1 Non Chatacterized Hit- tr|I1MCY0|I1MCY0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.35776 PE,95.83,0,no
description,WD40/YVTN repeat-like-containing domain; PROTEIN
PHOSPHATASE PP2A 55 KDA REGULATORY S,CUFF.40478.1
         (217 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G17720.2 | Symbols: ATB BETA | Protein phosphatase 2A, regula...   401   e-112
AT1G17720.1 | Symbols: ATB BETA | Protein phosphatase 2A, regula...   401   e-112
AT1G51690.3 | Symbols: B ALPHA | protein phosphatase 2A 55 kDa r...   385   e-107
AT1G51690.2 | Symbols: ATB ALPHA, B ALPHA | protein phosphatase ...   385   e-107
AT1G51690.1 | Symbols: ATB ALPHA, B ALPHA | protein phosphatase ...   385   e-107

>AT1G17720.2 | Symbols: ATB BETA | Protein phosphatase 2A,
           regulatory subunit PR55 | chr1:6093949-6098065 REVERSE
           LENGTH=500
          Length = 500

 Score =  401 bits (1030), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 187/217 (86%), Positives = 206/217 (94%), Gaps = 1/217 (0%)

Query: 1   MLAYSSSKGSIRLVDLRQSALCDSHSKLFEEQEAPGSRSFFTEIIASISDIKFGNDGRYI 60
           MLAYSSSKGSIRL+D+RQSALCDSH+KLFEE EAPGSRSFFTEIIASISDIKF  DGRYI
Sbjct: 285 MLAYSSSKGSIRLIDMRQSALCDSHTKLFEEPEAPGSRSFFTEIIASISDIKFSKDGRYI 344

Query: 61  LSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATG 120
           LSRDYMTLKLWDINMDSGPVA++QVHE+LRP+LCDLYENDSIFDKFECCLSGDGLRVATG
Sbjct: 345 LSRDYMTLKLWDINMDSGPVASYQVHEHLRPRLCDLYENDSIFDKFECCLSGDGLRVATG 404

Query: 121 SYSNLFRVFGCAPGSAEATTLEASKNPMRRQVPTPSRPSRSLGNSITRIGRRGAETPGVD 180
           SYSNLFRVFG + GS EA TLEASKNPMRRQ+ TP+RPSRS+G S+TR+ RRG+E+PG +
Sbjct: 405 SYSNLFRVFGASQGSTEAATLEASKNPMRRQIQTPARPSRSIG-SMTRVVRRGSESPGTE 463

Query: 181 ANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA 217
           ANGN++DFTTKLLH+AWHPTENSIACAAANSLYMYYA
Sbjct: 464 ANGNAYDFTTKLLHMAWHPTENSIACAAANSLYMYYA 500


>AT1G17720.1 | Symbols: ATB BETA | Protein phosphatase 2A,
           regulatory subunit PR55 | chr1:6093949-6098065 REVERSE
           LENGTH=501
          Length = 501

 Score =  401 bits (1030), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 187/217 (86%), Positives = 206/217 (94%), Gaps = 1/217 (0%)

Query: 1   MLAYSSSKGSIRLVDLRQSALCDSHSKLFEEQEAPGSRSFFTEIIASISDIKFGNDGRYI 60
           MLAYSSSKGSIRL+D+RQSALCDSH+KLFEE EAPGSRSFFTEIIASISDIKF  DGRYI
Sbjct: 286 MLAYSSSKGSIRLIDMRQSALCDSHTKLFEEPEAPGSRSFFTEIIASISDIKFSKDGRYI 345

Query: 61  LSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATG 120
           LSRDYMTLKLWDINMDSGPVA++QVHE+LRP+LCDLYENDSIFDKFECCLSGDGLRVATG
Sbjct: 346 LSRDYMTLKLWDINMDSGPVASYQVHEHLRPRLCDLYENDSIFDKFECCLSGDGLRVATG 405

Query: 121 SYSNLFRVFGCAPGSAEATTLEASKNPMRRQVPTPSRPSRSLGNSITRIGRRGAETPGVD 180
           SYSNLFRVFG + GS EA TLEASKNPMRRQ+ TP+RPSRS+G S+TR+ RRG+E+PG +
Sbjct: 406 SYSNLFRVFGASQGSTEAATLEASKNPMRRQIQTPARPSRSIG-SMTRVVRRGSESPGTE 464

Query: 181 ANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA 217
           ANGN++DFTTKLLH+AWHPTENSIACAAANSLYMYYA
Sbjct: 465 ANGNAYDFTTKLLHMAWHPTENSIACAAANSLYMYYA 501


>AT1G51690.3 | Symbols: B ALPHA | protein phosphatase 2A 55 kDa
           regulatory subunit B alpha isoform |
           chr1:19164124-19169974 FORWARD LENGTH=603
          Length = 603

 Score =  385 bits (989), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 180/217 (82%), Positives = 197/217 (90%), Gaps = 1/217 (0%)

Query: 1   MLAYSSSKGSIRLVDLRQSALCDSHSKLFEEQEAPGSRSFFTEIIASISDIKFGNDGRYI 60
           MLAYSSSKGSIRL+DLRQSALCDSHSKLFEE E  G +SFFTEIIAS+SDIKF  +GRY+
Sbjct: 388 MLAYSSSKGSIRLIDLRQSALCDSHSKLFEEPEQAGPKSFFTEIIASVSDIKFAKEGRYL 447

Query: 61  LSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATG 120
           LSRDYMTLKLWDINMD+GPVATFQVHEYL+PKLCDLYENDSIFDKFECC+SG+GLR ATG
Sbjct: 448 LSRDYMTLKLWDINMDAGPVATFQVHEYLKPKLCDLYENDSIFDKFECCISGNGLRAATG 507

Query: 121 SYSNLFRVFGCAPGSAEATTLEASKNPMRRQVPTPSRPSRSLGNSITRIGRRGAETPGVD 180
           SYSNLFRVFG APGS E  TLEAS+NPMRR VP PSRPSR+L +SITR+  RG+E+PGVD
Sbjct: 508 SYSNLFRVFGVAPGSTETATLEASRNPMRRHVPIPSRPSRAL-SSITRVVSRGSESPGVD 566

Query: 181 ANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA 217
            N N+ D+TTKLLHLAWHP ENSIACAAANSLYMYYA
Sbjct: 567 GNTNALDYTTKLLHLAWHPNENSIACAAANSLYMYYA 603


>AT1G51690.2 | Symbols: ATB ALPHA, B ALPHA | protein phosphatase 2A
           55 kDa regulatory subunit B alpha isoform |
           chr1:19166218-19169974 FORWARD LENGTH=512
          Length = 512

 Score =  385 bits (989), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 180/217 (82%), Positives = 197/217 (90%), Gaps = 1/217 (0%)

Query: 1   MLAYSSSKGSIRLVDLRQSALCDSHSKLFEEQEAPGSRSFFTEIIASISDIKFGNDGRYI 60
           MLAYSSSKGSIRL+DLRQSALCDSHSKLFEE E  G +SFFTEIIAS+SDIKF  +GRY+
Sbjct: 297 MLAYSSSKGSIRLIDLRQSALCDSHSKLFEEPEQAGPKSFFTEIIASVSDIKFAKEGRYL 356

Query: 61  LSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATG 120
           LSRDYMTLKLWDINMD+GPVATFQVHEYL+PKLCDLYENDSIFDKFECC+SG+GLR ATG
Sbjct: 357 LSRDYMTLKLWDINMDAGPVATFQVHEYLKPKLCDLYENDSIFDKFECCISGNGLRAATG 416

Query: 121 SYSNLFRVFGCAPGSAEATTLEASKNPMRRQVPTPSRPSRSLGNSITRIGRRGAETPGVD 180
           SYSNLFRVFG APGS E  TLEAS+NPMRR VP PSRPSR+L +SITR+  RG+E+PGVD
Sbjct: 417 SYSNLFRVFGVAPGSTETATLEASRNPMRRHVPIPSRPSRAL-SSITRVVSRGSESPGVD 475

Query: 181 ANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA 217
            N N+ D+TTKLLHLAWHP ENSIACAAANSLYMYYA
Sbjct: 476 GNTNALDYTTKLLHLAWHPNENSIACAAANSLYMYYA 512


>AT1G51690.1 | Symbols: ATB ALPHA, B ALPHA | protein phosphatase 2A
           55 kDa regulatory subunit B alpha isoform |
           chr1:19166218-19169974 FORWARD LENGTH=513
          Length = 513

 Score =  385 bits (989), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 180/217 (82%), Positives = 197/217 (90%), Gaps = 1/217 (0%)

Query: 1   MLAYSSSKGSIRLVDLRQSALCDSHSKLFEEQEAPGSRSFFTEIIASISDIKFGNDGRYI 60
           MLAYSSSKGSIRL+DLRQSALCDSHSKLFEE E  G +SFFTEIIAS+SDIKF  +GRY+
Sbjct: 298 MLAYSSSKGSIRLIDLRQSALCDSHSKLFEEPEQAGPKSFFTEIIASVSDIKFAKEGRYL 357

Query: 61  LSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATG 120
           LSRDYMTLKLWDINMD+GPVATFQVHEYL+PKLCDLYENDSIFDKFECC+SG+GLR ATG
Sbjct: 358 LSRDYMTLKLWDINMDAGPVATFQVHEYLKPKLCDLYENDSIFDKFECCISGNGLRAATG 417

Query: 121 SYSNLFRVFGCAPGSAEATTLEASKNPMRRQVPTPSRPSRSLGNSITRIGRRGAETPGVD 180
           SYSNLFRVFG APGS E  TLEAS+NPMRR VP PSRPSR+L +SITR+  RG+E+PGVD
Sbjct: 418 SYSNLFRVFGVAPGSTETATLEASRNPMRRHVPIPSRPSRAL-SSITRVVSRGSESPGVD 476

Query: 181 ANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA 217
            N N+ D+TTKLLHLAWHP ENSIACAAANSLYMYYA
Sbjct: 477 GNTNALDYTTKLLHLAWHPNENSIACAAANSLYMYYA 513