Miyakogusa Predicted Gene

Lj3g3v0300640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0300640.1 tr|B9N6J8|B9N6J8_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1116851 PE=4
SV=1,31.95,1e-18,seg,NULL; no description,Plant lipid transfer
protein/hydrophobic protein helical domain; Bifunction,CUFF.40465.1
         (185 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G44300.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer ...    87   8e-18
AT2G44290.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer ...    82   2e-16
AT1G55260.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer ...    76   1e-14
AT1G55260.2 | Symbols:  | Bifunctional inhibitor/lipid-transfer ...    75   2e-14
AT3G58550.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer ...    70   1e-12

>AT2G44300.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer
           protein/seed storage 2S albumin superfamily protein |
           chr2:18307468-18308286 REVERSE LENGTH=204
          Length = 204

 Score = 86.7 bits (213), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 41/106 (38%), Positives = 63/106 (59%), Gaps = 7/106 (6%)

Query: 32  QDTAECYNKLIGITYCLPYVMDQANAPPKDCCTGIKEIDHNGKRCLCLLFKD-------V 84
           +D  EC  +L+G+  CLPYV  QA +P  DCC+G+K++ ++ K+CLC++ +D       +
Sbjct: 30  KDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVLNSNKKCLCVIIQDRNDPDLGL 89

Query: 85  QFNVLRALKLQGACKTPVNFTQCVDVLQLAPKSREAKVFEGYDKGI 130
           Q NV  AL L   C    + T+C  +L L P S +A+VF    KG+
Sbjct: 90  QINVSLALALPSVCHAAADVTKCPALLHLDPNSPDAQVFYQLAKGL 135


>AT2G44290.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer
           protein/seed storage 2S albumin superfamily protein |
           chr2:18305418-18306202 REVERSE LENGTH=205
          Length = 205

 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/106 (35%), Positives = 62/106 (58%), Gaps = 7/106 (6%)

Query: 32  QDTAECYNKLIGITYCLPYVMDQANAPPKDCCTGIKEIDHNGKRCLCLLFKD-------V 84
           +D  EC  +L+G+  CLPYV  +A +P  DCC+G+K++ ++  +CLC++ ++       +
Sbjct: 31  KDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQVINSDMKCLCMIIQERNDPDLGL 90

Query: 85  QFNVLRALKLQGACKTPVNFTQCVDVLQLAPKSREAKVFEGYDKGI 130
           Q NV  AL L   C    + T+C  +L L P S +A+VF    KG+
Sbjct: 91  QVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQVFYQLAKGL 136


>AT1G55260.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer
           protein/seed storage 2S albumin superfamily protein |
           chr1:20614663-20616158 FORWARD LENGTH=227
          Length = 227

 Score = 75.9 bits (185), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 8/101 (7%)

Query: 32  QDTAECYNKLIGITYCLPYVMDQANAPPKDCCTGIKEIDHNGKRCLCLLFKD-------V 84
           QD  EC N+LI ++ C+PYV   A AP KDCC G  ++    ++C+C+L +D       +
Sbjct: 71  QDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIRKSEKCVCILVRDKDDPQLGI 130

Query: 85  QFNVLRALKLQGACK-TPVNFTQCVDVLQLAPKSREAKVFE 124
           + N   A  L  AC  T  N T C+ +L L   S  AK FE
Sbjct: 131 KINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKEFE 171


>AT1G55260.2 | Symbols:  | Bifunctional inhibitor/lipid-transfer
           protein/seed storage 2S albumin superfamily protein |
           chr1:20614663-20616158 FORWARD LENGTH=224
          Length = 224

 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 8/101 (7%)

Query: 32  QDTAECYNKLIGITYCLPYVMDQANAPPKDCCTGIKEIDHNGKRCLCLLFKD-------V 84
           QD  EC N+LI ++ C+PYV   A AP KDCC G  ++    ++C+C+L +D       +
Sbjct: 71  QDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIRKSEKCVCILVRDKDDPQLGI 130

Query: 85  QFNVLRALKLQGACK-TPVNFTQCVDVLQLAPKSREAKVFE 124
           + N   A  L  AC  T  N T C+ +L L   S  AK FE
Sbjct: 131 KINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKEFE 171


>AT3G58550.1 | Symbols:  | Bifunctional inhibitor/lipid-transfer
           protein/seed storage 2S albumin superfamily protein |
           chr3:21649506-21650233 REVERSE LENGTH=177
          Length = 177

 Score = 69.7 bits (169), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 60/110 (54%), Gaps = 9/110 (8%)

Query: 31  NQDTAECYNKLIGITYCLPYVMDQANAPPKDCCTGIK-EIDH-NGKRCLCLLFKD----- 83
           +QD   C + +  +  CLP+V ++A AP   CC+ +K +ID    ++CLC L KD     
Sbjct: 32  SQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKIDKGQTRKCLCTLVKDRDDPG 91

Query: 84  --VQFNVLRALKLQGACKTPVNFTQCVDVLQLAPKSREAKVFEGYDKGIS 131
              + +  RA+ L  AC  P N +QC D+L L P S  +++F+ + +  S
Sbjct: 92  LGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDSPASQIFKQFTESSS 141