Miyakogusa Predicted Gene
- Lj3g3v0290540.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0290540.2 Non Chatacterized Hit- tr|I1KUX4|I1KUX4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8673 PE=,83.57,0,no
description,NULL;
ELFV_dehydrog_N,Glutamate/phenylalanine/leucine/valine dehydrogenase,
dimerisat,CUFF.40498.2
(398 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G51720.1 | Symbols: | Amino acid dehydrogenase family protei... 568 e-162
AT5G18170.1 | Symbols: GDH1 | glutamate dehydrogenase 1 | chr5:6... 58 1e-08
AT3G03910.1 | Symbols: GDH3 | glutamate dehydrogenase 3 | chr3:1... 56 4e-08
AT5G07440.3 | Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2... 55 6e-08
AT5G07440.2 | Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2... 55 7e-08
AT5G07440.1 | Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2... 55 7e-08
>AT1G51720.1 | Symbols: | Amino acid dehydrogenase family protein |
chr1:19181741-19186297 FORWARD LENGTH=637
Length = 637
Score = 568 bits (1465), Expect = e-162, Method: Compositional matrix adjust.
Identities = 265/347 (76%), Positives = 298/347 (85%), Gaps = 1/347 (0%)
Query: 1 MLQSASGVGMNPAMDDINLIQQAQRHQLVVREIGEEIDLEIGPGEDDPSFGNTALIGGPP 60
M G+GMNP+MDD+NLIQQAQRHQLVV +GEEIDLEIGPGEDD +F N +LIGGPP
Sbjct: 1 MFGPTGGLGMNPSMDDMNLIQQAQRHQLVVSNLGEEIDLEIGPGEDDAAFANNSLIGGPP 60
Query: 61 QE-SSEEHVENKQAGIVSQLSNDTQDMSNNQQGXXXXXXXXXXXXXXADTYKWAYVDVKD 119
+E S+ EH E K +VS L ++ QD+S ADTYKWAYVD+KD
Sbjct: 61 REPSTGEHDETKHMVLVSDLPSEDQDISKGTPAKRKKKVVKRWREEWADTYKWAYVDMKD 120
Query: 120 GTARVFCSVCRVYGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQAASKDKIVI 179
GTAR+FCS+CR YGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQ ASKDKIV+
Sbjct: 121 GTARIFCSICREYGRKHRRNPYGNEGSRNMQMSALEEHNNSLLHKEALRLQTASKDKIVV 180
Query: 180 EKPVYAKALVSKTAGSIIEATLKRDPHEAEFIQTVQEVVHALERVIAKNSHYVSIMERLL 239
+KP+Y K ++SK+AGSI+E LKRDP+E EF+Q+VQE VHALERVIAKNSHYV+IMERLL
Sbjct: 181 DKPIYVKTVMSKSAGSIVEGALKRDPNEIEFVQSVQESVHALERVIAKNSHYVNIMERLL 240
Query: 240 EPERVIVFRVPWVDDRGEAHVNRAFRIQFNQSLGPCRGGLRFHPSMNLSIAKFLGFQQTL 299
EPER+IVFRVPW+DDRGE HVNR FR+QFNQ+LGPCRGG+RFHPSMNLSIAKFLGFQQTL
Sbjct: 241 EPERMIVFRVPWIDDRGETHVNRGFRVQFNQALGPCRGGIRFHPSMNLSIAKFLGFQQTL 300
Query: 300 KNALSPYKLGGASGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLGPDK 346
KNALSPYKLGGASGGSDFDPKGKSDNEIMRFCQSFM+EMYRY+GPDK
Sbjct: 301 KNALSPYKLGGASGGSDFDPKGKSDNEIMRFCQSFMNEMYRYMGPDK 347
>AT5G18170.1 | Symbols: GDH1 | glutamate dehydrogenase 1 |
chr5:6006172-6008248 FORWARD LENGTH=411
Length = 411
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 50/106 (47%)
Query: 238 LLEPERVIVFRVPWVDDRGEAHVNRAFRIQFNQSLGPCRGGLRFHPSMNLSIAKFLGFQQ 297
LL P R I D G FR+Q + + GP +GG+R+HP ++ L
Sbjct: 28 LLIPFREIKVECTIPKDDGTLASFVGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLM 87
Query: 298 TLKNALSPYKLGGASGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLG 343
T K A++ GGA GG DP S +E+ R + F +++ +G
Sbjct: 88 TWKTAVAKIPYGGAKGGIGCDPSKLSISELERLTRVFTQKIHDLIG 133
>AT3G03910.1 | Symbols: GDH3 | glutamate dehydrogenase 3 |
chr3:1006913-1008846 FORWARD LENGTH=411
Length = 411
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%)
Query: 238 LLEPERVIVFRVPWVDDRGEAHVNRAFRIQFNQSLGPCRGGLRFHPSMNLSIAKFLGFQQ 297
LL P R I D G FR+Q + + GP +GG+R+HP + L
Sbjct: 28 LLIPFREIKVECTIPKDDGTLASFVGFRVQHDNARGPMKGGIRYHPEVEPDEVNALAQLM 87
Query: 298 TLKNALSPYKLGGASGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLG 343
T K A++ GGA GG DP S +E+ R + F +++ +G
Sbjct: 88 TWKTAVAKIPYGGAKGGIGCDPSELSLSELERLTRVFTQKIHDLIG 133
>AT5G07440.3 | Symbols: GDH2 | glutamate dehydrogenase 2 |
chr5:2356153-2357546 FORWARD LENGTH=309
Length = 309
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 233 SIMER-LLEPERVIVFRVPWVDDRGEAHVNRAFRIQFNQSLGPCRGGLRFHPSMNLSIAK 291
S +ER L+ P R I D G FR+Q + + GP +GG+R+HP ++
Sbjct: 22 SKIERSLMIPFREIKVECTIPKDDGTLVSYIGFRVQHDNARGPMKGGIRYHPEVDPDEVN 81
Query: 292 FLGFQQTLKNALSPYKLGGASGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLG 343
L T K A++ GGA GG P+ S +E+ R + F +++ +G
Sbjct: 82 ALAQLMTWKTAVADIPYGGAKGGIGCSPRDLSLSELERLTRVFTQKIHDLIG 133
>AT5G07440.2 | Symbols: GDH2 | glutamate dehydrogenase 2 |
chr5:2356153-2358012 FORWARD LENGTH=411
Length = 411
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 233 SIMER-LLEPERVIVFRVPWVDDRGEAHVNRAFRIQFNQSLGPCRGGLRFHPSMNLSIAK 291
S +ER L+ P R I D G FR+Q + + GP +GG+R+HP ++
Sbjct: 22 SKIERSLMIPFREIKVECTIPKDDGTLVSYIGFRVQHDNARGPMKGGIRYHPEVDPDEVN 81
Query: 292 FLGFQQTLKNALSPYKLGGASGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLG 343
L T K A++ GGA GG P+ S +E+ R + F +++ +G
Sbjct: 82 ALAQLMTWKTAVADIPYGGAKGGIGCSPRDLSLSELERLTRVFTQKIHDLIG 133
>AT5G07440.1 | Symbols: GDH2 | glutamate dehydrogenase 2 |
chr5:2356153-2358012 FORWARD LENGTH=411
Length = 411
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 1/112 (0%)
Query: 233 SIMER-LLEPERVIVFRVPWVDDRGEAHVNRAFRIQFNQSLGPCRGGLRFHPSMNLSIAK 291
S +ER L+ P R I D G FR+Q + + GP +GG+R+HP ++
Sbjct: 22 SKIERSLMIPFREIKVECTIPKDDGTLVSYIGFRVQHDNARGPMKGGIRYHPEVDPDEVN 81
Query: 292 FLGFQQTLKNALSPYKLGGASGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLG 343
L T K A++ GGA GG P+ S +E+ R + F +++ +G
Sbjct: 82 ALAQLMTWKTAVADIPYGGAKGGIGCSPRDLSLSELERLTRVFTQKIHDLIG 133