Miyakogusa Predicted Gene

Lj3g3v0290540.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0290540.1 Non Chatacterized Hit- tr|I1KUX5|I1KUX5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.8673
PE=,91.19,0,Glutamate/Leucine/Phenylalanine/Valine,
Glutamate/phenylalanine/leucine/valine dehydrogenase,
C-termi,CUFF.40498.1
         (352 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G51720.1 | Symbols:  | Amino acid dehydrogenase family protei...   590   e-169
AT3G03910.1 | Symbols: GDH3 | glutamate dehydrogenase 3 | chr3:1...   107   1e-23
AT5G18170.1 | Symbols: GDH1 | glutamate dehydrogenase 1 | chr5:6...   107   2e-23
AT5G07440.2 | Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2...   105   3e-23
AT5G07440.1 | Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2...   105   3e-23
AT5G07440.3 | Symbols: GDH2 | glutamate dehydrogenase 2 | chr5:2...    93   3e-19

>AT1G51720.1 | Symbols:  | Amino acid dehydrogenase family protein |
           chr1:19181741-19186297 FORWARD LENGTH=637
          Length = 637

 Score =  590 bits (1520), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 275/352 (78%), Positives = 311/352 (88%)

Query: 1   MNLSIAKFLGFQQTLKNALSPYKLGGASGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLGP 60
           MNLSIAKFLGFQQTLKNALSPYKLGGASGGSDFDPKGKSDNEIMRFCQSFM+EMYRY+GP
Sbjct: 286 MNLSIAKFLGFQQTLKNALSPYKLGGASGGSDFDPKGKSDNEIMRFCQSFMNEMYRYMGP 345

Query: 61  DKDHPSEEMGVGTREMGYLFGQYRRLAGQFQGSFTGPRIFLSGSSLRTEATGYGLVFFAQ 120
           DKD PSEE+GVGTREMGYLFGQYRRLAGQFQGSFTGPRI+ + SSLRTEA+GYG+V+FA+
Sbjct: 346 DKDLPSEEVGVGTREMGYLFGQYRRLAGQFQGSFTGPRIYWAASSLRTEASGYGVVYFAR 405

Query: 121 LILADMNKDLKGLRCVVTGSGKIAMHVLEKLIAYGGVPITVSDSRGYLVDEDGFDYMKLS 180
           LILADMNK++KGLRCVV+G GKIAMHV+EKLIA G  P+TVSDS+GYLVD+DGFDYMKL+
Sbjct: 406 LILADMNKEIKGLRCVVSGCGKIAMHVVEKLIACGAHPVTVSDSKGYLVDDDGFDYMKLA 465

Query: 181 LLRDIKAQQRSLRDYSKTYARSKYYDEAKPWNERCDLAFACASQNEIDQSDATNLVNSGC 240
            LRDIK+QQRSLRDYSKTYAR+KY+DE KPWNERCD+AF CASQNE+DQ+DA NLVN+GC
Sbjct: 466 FLRDIKSQQRSLRDYSKTYARAKYFDELKPWNERCDVAFPCASQNEVDQADAINLVNAGC 525

Query: 241 RLLIEGSNMPCTPEAVDVLRKXXXXXXXXXXXXXXXXXXXELELNHECSLMHWSPEDFES 300
           RLL+EGSNMPCT EAVDV RK                   E+E+  E + M WS EDFES
Sbjct: 526 RLLVEGSNMPCTAEAVDVFRKANVLIAPAIAAGAGGVAAGEIEVLRESNSMQWSAEDFES 585

Query: 301 KLQEAMKQTHQRAIKAATDFGYQKESPEALVHGAVISAFLTIAQAMTDQGCV 352
           +LQEA+KQT+++A+KAA DFGYQKESPEAL+HGA I+AFL IAQAMTDQGCV
Sbjct: 586 RLQEALKQTYEKALKAANDFGYQKESPEALLHGATIAAFLNIAQAMTDQGCV 637


>AT3G03910.1 | Symbols: GDH3 | glutamate dehydrogenase 3 |
           chr3:1006913-1008846 FORWARD LENGTH=411
          Length = 411

 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 10/248 (4%)

Query: 14  TLKNALSPYKLGGASGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLGPDKDHPSEEMGVGT 73
           T K A++    GGA GG   DP   S +E+ R  + F  +++  +G   D P+ +MG G 
Sbjct: 88  TWKTAVAKIPYGGAKGGIGCDPSELSLSELERLTRVFTQKIHDLIGIHTDVPAPDMGTGP 147

Query: 74  REMGYLFGQYRRLAGQFQGSFTGPRIFLSGSSLRTEATGYGLVFFAQLILADMNKDLKGL 133
           + M ++  +Y +  G      TG  I L GS  R  ATG G++F  + +L +  K + G 
Sbjct: 148 QTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKTISGQ 207

Query: 134 RCVVTGSGKIAMHVLEKLIAYGGVPITVSDSRGYLVDEDGFDYMKLSLLRDIKAQQRSLR 193
           R  + G G +     + +   GG  + VSD  G + + +G D   LSLL   + + R ++
Sbjct: 208 RFAIQGFGNVGSWAAKLISDKGGKIVAVSDVTGAIKNNNGIDI--LSLLEHAE-ENRGIK 264

Query: 194 DYSKTYARSKYYDEAKPWNERCDLAFACASQNEIDQSDATNLVNSGCRLLIEGSNMPCTP 253
            +      +   D      E CD+    A    I++ +A  +     + +IEG+N P  P
Sbjct: 265 GFDG----ADSIDPDSILVEDCDILVPAALGGVINRENANEI---KAKFIIEGANHPTDP 317

Query: 254 EAVDVLRK 261
           EA ++L+K
Sbjct: 318 EADEILKK 325


>AT5G18170.1 | Symbols: GDH1 | glutamate dehydrogenase 1 |
           chr5:6006172-6008248 FORWARD LENGTH=411
          Length = 411

 Score =  107 bits (266), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 22/254 (8%)

Query: 14  TLKNALSPYKLGGASGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLGPDKDHPSEEMGVGT 73
           T K A++    GGA GG   DP   S +E+ R  + F  +++  +G   D P+ +MG G 
Sbjct: 88  TWKTAVAKIPYGGAKGGIGCDPSKLSISELERLTRVFTQKIHDLIGIHTDVPAPDMGTGP 147

Query: 74  REMGYLFGQYRRLAGQFQGSFTGPRIFLSGSSLRTEATGYGLVFFAQLILADMNKDLKGL 133
           + M ++  +Y +  G      TG  I L GS  R  ATG G++F  + +L +  K + G 
Sbjct: 148 QTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLGRDAATGRGVMFGTEALLNEHGKTISGQ 207

Query: 134 RCVVTGSGKIAMHVLEKLIAYGGVPITVSDSRGYLVDEDGFDYMKLSLLRDIKAQQRSLR 193
           R V+ G G +     + +   GG  + VSD  G + ++DG D               +L 
Sbjct: 208 RFVIQGFGNVGSWAAKLISEKGGKIVAVSDITGAIKNKDGIDI-------------PALL 254

Query: 194 DYSKTYARSKYYDEAKPWN------ERCDLAFACASQNEIDQSDATNLVNSGCRLLIEGS 247
            ++K +   K +D A P +      E CD+    A    I++ +A  +     + +IE +
Sbjct: 255 KHTKEHRGVKGFDGADPIDPNSILVEDCDILVPAALGGVINRENANEI---KAKFIIEAA 311

Query: 248 NMPCTPEAVDVLRK 261
           N P  P+A ++L K
Sbjct: 312 NHPTDPDADEILSK 325


>AT5G07440.2 | Symbols: GDH2 | glutamate dehydrogenase 2 |
           chr5:2356153-2358012 FORWARD LENGTH=411
          Length = 411

 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 119/248 (47%), Gaps = 10/248 (4%)

Query: 14  TLKNALSPYKLGGASGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLGPDKDHPSEEMGVGT 73
           T K A++    GGA GG    P+  S +E+ R  + F  +++  +G   D P+ +MG   
Sbjct: 88  TWKTAVADIPYGGAKGGIGCSPRDLSLSELERLTRVFTQKIHDLIGIHTDVPAPDMGTNA 147

Query: 74  REMGYLFGQYRRLAGQFQGSFTGPRIFLSGSSLRTEATGYGLVFFAQLILADMNKDLKGL 133
           + M ++  +Y +  G      TG  I L GS  R  ATG G+VF  + +LA+  K ++GL
Sbjct: 148 QTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVFATEALLAEYGKSIQGL 207

Query: 134 RCVVTGSGKIAMHVLEKLIAYGGVPITVSDSRGYLVDEDGFDYMKLSLLRDIKAQQRSLR 193
             V+ G G +     + +   GG  + VSD  G + + +G D   L   +D      SL 
Sbjct: 208 TFVIQGFGNVGTWAAKLIHEKGGKVVAVSDITGAIRNPEGIDINALIKHKDATG---SLN 264

Query: 194 DYSKTYARSKYYDEAKPWNERCDLAFACASQNEIDQSDATNLVNSGCRLLIEGSNMPCTP 253
           D++   A +   DE       CD+   CA    +++ +A ++     + ++E +N P  P
Sbjct: 265 DFNGGDAMNS--DELLI--HECDVLIPCALGGVLNKENAGDV---KAKFIVEAANHPTDP 317

Query: 254 EAVDVLRK 261
           +A ++L K
Sbjct: 318 DADEILSK 325


>AT5G07440.1 | Symbols: GDH2 | glutamate dehydrogenase 2 |
           chr5:2356153-2358012 FORWARD LENGTH=411
          Length = 411

 Score =  105 bits (263), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 119/248 (47%), Gaps = 10/248 (4%)

Query: 14  TLKNALSPYKLGGASGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLGPDKDHPSEEMGVGT 73
           T K A++    GGA GG    P+  S +E+ R  + F  +++  +G   D P+ +MG   
Sbjct: 88  TWKTAVADIPYGGAKGGIGCSPRDLSLSELERLTRVFTQKIHDLIGIHTDVPAPDMGTNA 147

Query: 74  REMGYLFGQYRRLAGQFQGSFTGPRIFLSGSSLRTEATGYGLVFFAQLILADMNKDLKGL 133
           + M ++  +Y +  G      TG  I L GS  R  ATG G+VF  + +LA+  K ++GL
Sbjct: 148 QTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVFATEALLAEYGKSIQGL 207

Query: 134 RCVVTGSGKIAMHVLEKLIAYGGVPITVSDSRGYLVDEDGFDYMKLSLLRDIKAQQRSLR 193
             V+ G G +     + +   GG  + VSD  G + + +G D   L   +D      SL 
Sbjct: 208 TFVIQGFGNVGTWAAKLIHEKGGKVVAVSDITGAIRNPEGIDINALIKHKDATG---SLN 264

Query: 194 DYSKTYARSKYYDEAKPWNERCDLAFACASQNEIDQSDATNLVNSGCRLLIEGSNMPCTP 253
           D++   A +   DE       CD+   CA    +++ +A ++     + ++E +N P  P
Sbjct: 265 DFNGGDAMNS--DELLI--HECDVLIPCALGGVLNKENAGDV---KAKFIVEAANHPTDP 317

Query: 254 EAVDVLRK 261
           +A ++L K
Sbjct: 318 DADEILSK 325


>AT5G07440.3 | Symbols: GDH2 | glutamate dehydrogenase 2 |
           chr5:2356153-2357546 FORWARD LENGTH=309
          Length = 309

 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 7/217 (3%)

Query: 14  TLKNALSPYKLGGASGGSDFDPKGKSDNEIMRFCQSFMSEMYRYLGPDKDHPSEEMGVGT 73
           T K A++    GGA GG    P+  S +E+ R  + F  +++  +G   D P+ +MG   
Sbjct: 88  TWKTAVADIPYGGAKGGIGCSPRDLSLSELERLTRVFTQKIHDLIGIHTDVPAPDMGTNA 147

Query: 74  REMGYLFGQYRRLAGQFQGSFTGPRIFLSGSSLRTEATGYGLVFFAQLILADMNKDLKGL 133
           + M ++  +Y +  G      TG  I L GS  R  ATG G+VF  + +LA+  K ++GL
Sbjct: 148 QTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVFATEALLAEYGKSIQGL 207

Query: 134 RCVVTGSGKIAMHVLEKLIAYGGVPITVSDSRGYLVDEDGFDYMKLSLLRDIKAQQRSLR 193
             V+ G G +     + +   GG  + VSD  G + + +G D   L   +D      SL 
Sbjct: 208 TFVIQGFGNVGTWAAKLIHEKGGKVVAVSDITGAIRNPEGIDINALIKHKDATG---SLN 264

Query: 194 DYSKTYARSKYYDEAKPWNERCDLAFACASQNEIDQS 230
           D++   A +   DE       CD+   CA    +++S
Sbjct: 265 DFNGGDAMNS--DEL--LIHECDVLIPCALGGVLNKS 297