Miyakogusa Predicted Gene

Lj3g3v0290530.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0290530.1 tr|Q5JQR9|Q5JQR9_ORYSJ OSJNba0093F12.23 protein
OS=Oryza sativa subsp. japonica GN=OSJNba0093F12.23
,58.23,6e-17,seg,NULL; Tudor/PWWP/MBT,NULL; PWWP,PWWP,CUFF.40470.1
         (772 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G21295.1 | Symbols:  | Tudor/PWWP/MBT superfamily protein | c...   293   4e-79
AT1G51745.1 | Symbols:  | Tudor/PWWP/MBT superfamily protein | c...   262   9e-70
AT1G51745.2 | Symbols:  | Tudor/PWWP/MBT superfamily protein | c...   189   5e-48
AT3G03140.1 | Symbols:  | Tudor/PWWP/MBT superfamily protein | c...   171   2e-42

>AT3G21295.1 | Symbols:  | Tudor/PWWP/MBT superfamily protein |
           chr3:7489635-7492296 FORWARD LENGTH=645
          Length = 645

 Score =  293 bits (749), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 212/502 (42%), Positives = 272/502 (54%), Gaps = 58/502 (11%)

Query: 8   MGSSGE---NGIDASEGGLVWVRRRNGSWWPGRIMGLHELSESSLVSPRSGTPVKLLGRE 64
           MGSS E     IDAS GGLVWVRRRNG+WWPGRIM  HE+ + ++VSP+SGTP+KLLGR+
Sbjct: 1   MGSSDERNCKAIDASVGGLVWVRRRNGAWWPGRIMAHHEVPDGTIVSPKSGTPIKLLGRD 60

Query: 65  DASVDWYNLERSKRVKPFRCGEYDDCIEXXXXXXXXXXXXXXXYARREDAILHALELESA 124
           DASVDWYNLE+SKRVK FRCGEYD CI                YARREDAI HALE+E+A
Sbjct: 61  DASVDWYNLEKSKRVKAFRCGEYDACIATAKATASTTGKKAVKYARREDAIAHALEIENA 120

Query: 125 RLGKESLNFCSRSDTLGGEPVGLAGESPIISCSGXXXXXXXXXXXXXXXXXXXXXXXHQS 184
            L K+      ++ T G   V   G    I  SG                        QS
Sbjct: 121 HLAKDHPPCIEKASTSG--EVSRKG----IEDSGDVAETEVAL---------------QS 159

Query: 185 EISLEEPNQNGSSKMQSLQGRRRRTPNDSEDDGTEGVKRMRGLEDLGIGVVPKTKVLGAG 244
            +SL++     +SK+Q L  +RRRTPNDSEDDGT+  KRMRGLED+G+G   K KV    
Sbjct: 160 TMSLKKTKNGKASKVQPLSEKRRRTPNDSEDDGTQTNKRMRGLEDIGMGTGSKGKVQVGA 219

Query: 245 TPEIAQQDGALSGNSNTGNFLVNGTFVNGGKGHFS-TLKRRRTQVANVHESLKRKNRRRP 303
             E  Q++G  S  +N  + + NG+  NG     S ++KR+R+ V   ++  KRKNRRR 
Sbjct: 220 LLEDTQENGFKSDTNNINDSVSNGSLSNGSSRDCSPSMKRKRSPVVIANDYSKRKNRRRT 279

Query: 304 LTKVLESTAMVSVPAICDGLTSSISSPSLGVTYSSNPSTLYSNELQERSPLANHVFVSTE 363
           LTKVLESTA VS+P  CD L +S      GV+ S N S   SNE+               
Sbjct: 280 LTKVLESTATVSIPGTCDKLVNSDCLSLPGVSESDNNSD--SNEV--------------- 322

Query: 364 AAFENGTSADIQEDGRETSQTNYTVKENEASGISGQIWNDFSDKLFDVPFMKVGREERPL 423
             F    S +I E        N   KE+E S IS    +D S+ LFDVP    G E+ P 
Sbjct: 323 --FSENVSENIVE------VINDKGKESEVSNISVLAKDDSSNGLFDVPLN--GDEKYP- 371

Query: 424 TGFSPVLASCSSGKPGVDVLGQQSRHLGQSEALS-ARNEGYSTGFTSSIADHNITDLRAE 482
           +G S V  + SS  P   ++   +R  GQS      ++EG +   ++S A      ++  
Sbjct: 372 SGISTVPFTSSS--PRKALVSGPTRRFGQSSHDDVVKSEGSNGSPSTSPAATLFNGIKK- 428

Query: 483 IGSSEWLSKGKRNSRHARKEAL 504
             +S+W  KGKRNSR   K+ +
Sbjct: 429 -STSKWQLKGKRNSRQMSKKQV 449



 Score =  108 bits (270), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 119/237 (50%), Gaps = 20/237 (8%)

Query: 542 APVAS-YNGTSQARCKQVAEGELGGFRDLSKRIKGTRDVKLLPDRSLTPQVSLPYRQPRL 600
           +P A+ +NG  ++  K   +G+    +   K+++         + +  P  S+  ++PR 
Sbjct: 417 SPAATLFNGIKKSTSKWQLKGKRNSRQMSKKQVERRNAYAEEANNNALPHWSVSDQKPRS 476

Query: 601 PLAPNHPMLDCPGRNSCSDGSLYDVKIEIKSSYRPQHVPLVSLASKLNSQAFIGHPLTVE 660
             +     +   GRNS     LYDVKIE+K++Y+P++VPL+SL SKLN +A +GHP  VE
Sbjct: 477 LFSVGTQAM---GRNS----ELYDVKIEVKANYKPRNVPLISLRSKLNGEAIVGHPSVVE 529

Query: 661 VMPDGQCDDMMRMYGPGLEGGDTSGVVKPRIKPXXXXXXXXXXXXXXXXXXXXXXXXTRK 720
           V+ DG C  ++  +       D +       K                         TR 
Sbjct: 530 VLEDGSCGHIVSSHRI-----DDAKPKPSSKKKSKKKKPHFPPQASKSKKSSSLAIKTRC 584

Query: 721 LSSLTGQK--KSERKKVGTP-----VVACIPLSVVFSRINEAVSGQARPAHRAPPTS 770
           LS+L+GQK   S +KKV        +VACIPL VVFSRINEAV G AR  HR+ P++
Sbjct: 585 LSALSGQKLTLSSKKKVMIESTKERIVACIPLKVVFSRINEAVKGSARQVHRSLPSA 641


>AT1G51745.1 | Symbols:  | Tudor/PWWP/MBT superfamily protein |
           chr1:19192055-19194375 FORWARD LENGTH=563
          Length = 563

 Score =  262 bits (669), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 206/512 (40%), Positives = 261/512 (50%), Gaps = 71/512 (13%)

Query: 15  GIDASEGGLVWVRRRNGSWWPGRIMGLHELSESSLVSPRSGTPVKLLGREDASVDWYNLE 74
            I+AS G LVWVRRRNGSWWPG+ +   ++ ++SLV P+ GTP+KLLGR+D SVDWY LE
Sbjct: 11  AINASVGRLVWVRRRNGSWWPGQTLVHDQVPDNSLVGPKVGTPIKLLGRDDVSVDWYILE 70

Query: 75  RSKRVKPFRCGEYDDCIEXXXXXXXXXXXXXXXYARREDAILHALELESARLGKESLNFC 134
            SK VK FRCGEYD CIE                  REDAI +AL++E+  L KE  N C
Sbjct: 71  NSKTVKAFRCGEYDTCIEKAKASSSKKRSGKCTL--REDAINNALKIENEHLAKEDDNLC 128

Query: 135 SRSDTLGGEPVGLAGESPIISC-SGXXXXXXXXXXXXXXXXXXXXXXXH--QSEISLEEP 191
           +           L+GE     C SG                          QS IS +E 
Sbjct: 129 N-----------LSGEEDSKRCLSGKEDEDSGSSDAEETEDDELASAPEQLQSSISSQEM 177

Query: 192 NQNGSSKMQSLQGRRRRTPNDSEDDGTEGVKRMRGLEDLGIGVVPKTKVLGAGTPEIAQQ 251
           N  G+SK+QS   +RRRTPNDSEDDGTEGVKRMRGLED+G       K    G  E  Q 
Sbjct: 178 NNVGASKVQS---KRRRTPNDSEDDGTEGVKRMRGLEDIG-------KEQAGGIVEHKQD 227

Query: 252 DG-----ALSGNSNTGNFLVNGTFVNGGKGHFSTLKRRRTQVANVHESLKRKNRRRPLTK 306
                   LS + + GN + NG  V       S+LKR      NV E  KRKNRRR LTK
Sbjct: 228 LDLICAVGLSDSVSNGNTIANGNKV----CSPSSLKR------NVSECSKRKNRRRQLTK 277

Query: 307 VLESTAMVSVPAICDGLTSSISSPSLGVTYSSNPSTLYSNE-LQERSPLANH----VFVS 361
           VLESTAMVSVP  CD     +S    G+ Y S  S + S E ++  S + N+      VS
Sbjct: 278 VLESTAMVSVPVTCD---QGVSLDCQGI-YDSKVSGMESVESMKSVSVVINNNSDSTGVS 333

Query: 362 TEAAFENGTSADIQEDGRETSQTNYTVKENEASGISGQIWNDFSDKLFDVPFMKVGREER 421
            E A+EN   A            N   K++E S IS    +D SD+LFDVP      EE 
Sbjct: 334 CEDAYENVVGA----------SHNNKAKDSEISSISVSAEDDSSDRLFDVPLTG---EEN 380

Query: 422 PLTGFSPVLASCSSGKPGVDVLGQQSRHLGQ-SEALSARNEGYS-TGFTSSIADHNITDL 479
              GF    A+C    P   ++   +R  G+ S  +  +NE  + +  TS  A   +  +
Sbjct: 381 HSEGFP---AACRISSPRKALVTDLTRRCGRNSHNVFVKNEASNGSACTSPPASEPVNCI 437

Query: 480 RA--EIGSSEWLSKGKRNSRH-ARKEALRTHV 508
            +  E  +S+W  KGKRNSR  ++K+  R +V
Sbjct: 438 LSGIEKNTSKWQLKGKRNSRQMSKKQEERRNV 469



 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 38/51 (74%)

Query: 621 SLYDVKIEIKSSYRPQHVPLVSLASKLNSQAFIGHPLTVEVMPDGQCDDMM 671
           +LY+VKIE+K+SY    VPLVS  S+L+ +A +GHPL+VE++ +   + M+
Sbjct: 484 TLYEVKIEVKASYTKPRVPLVSRMSELSGKAIVGHPLSVEILEEDYSNGMV 534


>AT1G51745.2 | Symbols:  | Tudor/PWWP/MBT superfamily protein |
           chr1:19192236-19194375 FORWARD LENGTH=504
          Length = 504

 Score =  189 bits (481), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 174/461 (37%), Positives = 219/461 (47%), Gaps = 71/461 (15%)

Query: 66  ASVDWYNLERSKRVKPFRCGEYDDCIEXXXXXXXXXXXXXXXYARREDAILHALELESAR 125
           A  DWY LE SK VK FRCGEYD CIE                  REDAI +AL++E+  
Sbjct: 3   ACEDWYILENSKTVKAFRCGEYDTCIEKAKASSSKKRSGKCTL--REDAINNALKIENEH 60

Query: 126 LGKESLNFCSRSDTLGGEPVGLAGESPIISC-SGXXXXXXXXXXXXXXXXXXXXXXXH-- 182
           L KE  N C+           L+GE     C SG                          
Sbjct: 61  LAKEDDNLCN-----------LSGEEDSKRCLSGKEDEDSGSSDAEETEDDELASAPEQL 109

Query: 183 QSEISLEEPNQNGSSKMQSLQGRRRRTPNDSEDDGTEGVKRMRGLEDLGIGVVPKTKVLG 242
           QS IS +E N  G+SK+QS   +RRRTPNDSEDDGTEGVKRMRGLED+G       K   
Sbjct: 110 QSSISSQEMNNVGASKVQS---KRRRTPNDSEDDGTEGVKRMRGLEDIG-------KEQA 159

Query: 243 AGTPEIAQQ-----DGALSGNSNTGNFLVNGTFVNGGKGHFSTLKRRRTQVANVHESLKR 297
            G  E  Q         LS + + GN + NG  V       S+LKR      NV E  KR
Sbjct: 160 GGIVEHKQDLDLICAVGLSDSVSNGNTIANGNKV----CSPSSLKR------NVSECSKR 209

Query: 298 KNRRRPLTKVLESTAMVSVPAICDGLTSSISSPSLGVTYSSNPSTLYSNE-LQERSPLAN 356
           KNRRR LTKVLESTAMVSVP  CD     +S    G+ Y S  S + S E ++  S + N
Sbjct: 210 KNRRRQLTKVLESTAMVSVPVTCD---QGVSLDCQGI-YDSKVSGMESVESMKSVSVVIN 265

Query: 357 H----VFVSTEAAFENGTSADIQEDGRETSQTNYTVKENEASGISGQIWNDFSDKLFDVP 412
           +      VS E A+EN   A            N   K++E S IS    +D SD+LFDVP
Sbjct: 266 NNSDSTGVSCEDAYENVVGA----------SHNNKAKDSEISSISVSAEDDSSDRLFDVP 315

Query: 413 FMKVGREERPLTGFSPVLASCSSGKPGVDVLGQQSRHLGQ-SEALSARNEGYS-TGFTSS 470
                 EE    GF    A+C    P   ++   +R  G+ S  +  +NE  + +  TS 
Sbjct: 316 LTG---EENHSEGFP---AACRISSPRKALVTDLTRRCGRNSHNVFVKNEASNGSACTSP 369

Query: 471 IADHNITDLRA--EIGSSEWLSKGKRNSRH-ARKEALRTHV 508
            A   +  + +  E  +S+W  KGKRNSR  ++K+  R +V
Sbjct: 370 PASEPVNCILSGIEKNTSKWQLKGKRNSRQMSKKQEERRNV 410



 Score = 56.2 bits (134), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 38/51 (74%)

Query: 621 SLYDVKIEIKSSYRPQHVPLVSLASKLNSQAFIGHPLTVEVMPDGQCDDMM 671
           +LY+VKIE+K+SY    VPLVS  S+L+ +A +GHPL+VE++ +   + M+
Sbjct: 425 TLYEVKIEVKASYTKPRVPLVSRMSELSGKAIVGHPLSVEILEEDYSNGMV 475


>AT3G03140.1 | Symbols:  | Tudor/PWWP/MBT superfamily protein |
           chr3:724348-727093 FORWARD LENGTH=769
          Length = 769

 Score =  171 bits (433), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 77/122 (63%), Positives = 89/122 (72%)

Query: 8   MGSSGENGIDASEGGLVWVRRRNGSWWPGRIMGLHELSESSLVSPRSGTPVKLLGREDAS 67
           M S G   +D + G +VWVRRRNGSWWPGRI+G  +L  + + SPRSGTPVKLLGREDAS
Sbjct: 1   MASPGSGAVDWTVGSIVWVRRRNGSWWPGRILGQEDLDSTHITSPRSGTPVKLLGREDAS 60

Query: 68  VDWYNLERSKRVKPFRCGEYDDCIEXXXXXXXXXXXXXXXYARREDAILHALELESARLG 127
           VDWYNLE+SKRVKPFRCG++D+CIE               YARREDAILHALELE   L 
Sbjct: 61  VDWYNLEKSKRVKPFRCGDFDECIERVESSQAMIIKKREKYARREDAILHALELEKEMLK 120

Query: 128 KE 129
           +E
Sbjct: 121 RE 122



 Score = 57.8 bits (138), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 2/60 (3%)

Query: 613 GRNSCSDGSLYDVKIEIKSSYRPQHVPLVSLASKLNSQAFIGHPLTVEVMPDGQCDDMMR 672
           GR + S  SL DV +E++ SY+   VP+VSL SKLN +A IGHP+ VEV+ DG  +  ++
Sbjct: 524 GRKTYS--SLMDVDLEVRGSYQKGPVPIVSLMSKLNGRAIIGHPVEVEVLADGSSESYIQ 581