Miyakogusa Predicted Gene

Lj3g3v0290180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0290180.1 Non Chatacterized Hit- tr|I1KPW4|I1KPW4_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,41.07,6e-17,DUF4005,Domain of unknown function
DUF4005,CUFF.40440.1
         (146 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G16490.1 | Symbols: IQD26 | IQ-domain 26 | chr3:5603962-56054...   101   2e-22
AT1G51960.1 | Symbols: IQD27 | IQ-domain 27 | chr1:19310355-1931...    77   4e-15
AT4G29150.1 | Symbols: IQD25 | IQ-domain 25 | chr4:14378770-1438...    49   1e-06
AT4G14750.1 | Symbols: IQD19 | IQ-domain 19 | chr4:8470449-84719...    48   2e-06
AT1G01110.1 | Symbols: IQD18 | IQ-domain 18 | chr1:53022-54494 F...    47   5e-06
AT1G01110.2 | Symbols: IQD18 | IQ-domain 18 | chr1:52239-54494 F...    46   8e-06

>AT3G16490.1 | Symbols: IQD26 | IQ-domain 26 | chr3:5603962-5605489
           REVERSE LENGTH=389
          Length = 389

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 64/137 (46%), Positives = 76/137 (55%), Gaps = 32/137 (23%)

Query: 1   MSECGEDLHSQTISSSSLPVPGRISVNGCQHLQDFEWCFNVGEHKFSTAQNTPRLANCVM 60
           +SECG+D   Q                     +DFEW F   + KF TAQNTPR ++ + 
Sbjct: 238 VSECGDDFIYQA--------------------KDFEWSFPGEKCKFPTAQNTPRFSSSMA 277

Query: 61  ---LYNAPASPMKSVCGDC--------SNFPSYMANTQSSKAKLRSHSAPKQRPDPKKRL 109
               Y  P SP KSVC D            PSYMANTQS KAK+RSHSAP+QRPD +KRL
Sbjct: 278 NNNYYYTPPSPAKSVCRDACFRPSYPGLMTPSYMANTQSFKAKVRSHSAPRQRPD-RKRL 336

Query: 110 PFNEIMATRNSTSDVRM 126
             +EIMA R+S S VRM
Sbjct: 337 SLDEIMAARSSVSGVRM 353


>AT1G51960.1 | Symbols: IQD27 | IQ-domain 27 |
           chr1:19310355-19311683 FORWARD LENGTH=351
          Length = 351

 Score = 77.0 bits (188), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/118 (42%), Positives = 67/118 (56%), Gaps = 14/118 (11%)

Query: 34  DFEWCFNVGEHKFSTAQNTPRLAN---CVMLYNAPASPMKSVCGDC-------SNFPSYM 83
           D E CF+  + KF+TAQNTPRL +       Y    SP KSV G          + P YM
Sbjct: 235 DLELCFSDEKWKFATAQNTPRLLHHHSANNRYYVMQSPAKSVGGKALCDYESSVSTPGYM 294

Query: 84  ANTQSSKAKLRSHSAPKQRPDPKKRLPFNEIMATRNSTSDVRMQWSSSSNPQAKECYC 141
             T+S KAK+RSHSAP+QR + ++RL  +E+MA+++S S V M   S  +P    C C
Sbjct: 295 EKTKSFKAKVRSHSAPRQRSE-RQRLSLDEVMASKSSVSGVSM---SHQHPPRHSCSC 348


>AT4G29150.1 | Symbols: IQD25 | IQ-domain 25 |
           chr4:14378770-14380340 FORWARD LENGTH=399
          Length = 399

 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 54/115 (46%), Gaps = 36/115 (31%)

Query: 11  QTISSSSLPVPGRISVNGCQHLQDFEWCFNVGEHKFSTAQNTPRLANCVMLYNAPASPMK 70
           +T+SS   P+ GR+         ++E C      KF TAQ+TPR +          SP +
Sbjct: 258 RTLSS---PLSGRVPPRLSMPKPEWEEC----SSKFPTAQSTPRFSG--------GSPAR 302

Query: 71  SVC-------------GDCSNF--------PSYMANTQSSKAKLRSHSAPKQRPD 104
           SVC              D + F          YMA+T S +AKLRSHSAP+QRP+
Sbjct: 303 SVCCSGGGVEAEVDTEADANRFCFLSGEFNSGYMADTTSFRAKLRSHSAPRQRPE 357


>AT4G14750.1 | Symbols: IQD19 | IQ-domain 19 | chr4:8470449-8471903
           FORWARD LENGTH=387
          Length = 387

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 3/58 (5%)

Query: 46  FSTAQNTPRLANCVMLYNAPASPMKSVCGDCSNFPSYMANTQSSKAKLRSHSAPKQRP 103
           F+TAQ++P+   C   +    +       D   FP+YMANTQSSKAK RS SAPKQRP
Sbjct: 235 FNTAQSSPQ---CFSRFKEYYNGDTLSSYDYPLFPNYMANTQSSKAKARSQSAPKQRP 289


>AT1G01110.1 | Symbols: IQD18 | IQ-domain 18 | chr1:53022-54494
           FORWARD LENGTH=364
          Length = 364

 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 46  FSTAQNTPRL-ANCVMLYNAPASPMKSVCGDCSNFPSYMANTQSSKAKLRSHSAPKQRPD 104
           +S   NTP L +N      +  S   ++  + S  P+YMA+T+S+KA++RSHSAP+QRP 
Sbjct: 227 YSYTSNTPSLRSNYSFTARSGCSISTTMVNNASLLPNYMASTESAKARIRSHSAPRQRPS 286

Query: 105 PKKR 108
             +R
Sbjct: 287 TPER 290


>AT1G01110.2 | Symbols: IQD18 | IQ-domain 18 | chr1:52239-54494
           FORWARD LENGTH=527
          Length = 527

 Score = 46.2 bits (108), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 1/64 (1%)

Query: 46  FSTAQNTPRL-ANCVMLYNAPASPMKSVCGDCSNFPSYMANTQSSKAKLRSHSAPKQRPD 104
           +S   NTP L +N      +  S   ++  + S  P+YMA+T+S+KA++RSHSAP+QRP 
Sbjct: 390 YSYTSNTPSLRSNYSFTARSGCSISTTMVNNASLLPNYMASTESAKARIRSHSAPRQRPS 449

Query: 105 PKKR 108
             +R
Sbjct: 450 TPER 453