Miyakogusa Predicted Gene

Lj3g3v0270540.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0270540.1 Non Chatacterized Hit- tr|E9AFY2|E9AFY2_LEIMA
Putative uncharacterized protein OS=Leishmania major
G,27.27,4e-18,RNase_Zc3h12a,Ribonuclease Zc3h12a-like; seg,NULL;
SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,Mitocho,CUFF.40398.1
         (296 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G32230.1 | Symbols: PRORP1 | proteinaceous RNase P 1 | chr2:1...   361   e-100
AT4G21900.1 | Symbols: PRORP3 | proteinaceous RNase P 3 | chr4:1...   257   8e-69
AT2G16650.1 | Symbols: PRORP2 | proteinaceous RNase P 2 | chr2:7...   253   2e-67
AT5G60430.2 | Symbols:  | drug transmembrane transporters;antipo...    77   1e-14
AT5G60430.1 | Symbols:  | drug transmembrane transporters;antipo...    77   1e-14

>AT2G32230.1 | Symbols: PRORP1 | proteinaceous RNase P 1 |
           chr2:13679608-13681756 REVERSE LENGTH=572
          Length = 572

 Score =  361 bits (927), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 166/273 (60%), Positives = 208/273 (76%), Gaps = 2/273 (0%)

Query: 2   KVGEENWDADKVRDGIVRXXXXXXXXXXXXXXXXKVVKTHVNEDGMCLSCGEKLVSIDLD 61
           K G + WD  K+RD +V                  V +T ++E+G+C  C EKLV ID++
Sbjct: 298 KTGVKKWDVKKIRDAVVSGGGGWHGQGWLGTGKWNVKRTEMDENGVCKCCKEKLVCIDIN 357

Query: 62  PKETENFATSLSKLACQRETQSNFNNFQKWLKQHGPFDAVVDGANVGLANQHNFSFSQLN 121
           P ETE FA SL++LAC+RE ++NFN FQ+WL++HGPFDAV+DGAN+GL NQ +FSF QLN
Sbjct: 358 PVETETFAASLTRLACEREVKANFNQFQEWLERHGPFDAVIDGANMGLVNQRSFSFFQLN 417

Query: 122 NVVKQLRQISPSKRLPLIILHVSRVTGGPAQNPNNKRLLEHWRENGALYATPQGSNDDWF 181
           N V++ +QISPSKRLPL+ILH SRV GGPA  P N+ LLE W+  GALYATP GSNDDW+
Sbjct: 418 NTVQRCQQISPSKRLPLVILHKSRVNGGPATYPKNRALLEKWKNAGALYATPPGSNDDWY 477

Query: 182 WLYAAVSCKCLLLTNDEMRDHLFQLLGSNFFPRWKEKHQIRVSAS-AGRVSLVMPPRYSI 240
           WLYAAVSCKCLL+TNDEMRDHLFQLLG++FFPRWKEKHQ+R+S +    + L MPP YSI
Sbjct: 478 WLYAAVSCKCLLVTNDEMRDHLFQLLGNSFFPRWKEKHQVRISVTREDGLKLNMPPPYSI 537

Query: 241 VIQESANGSWHVPTVTSDDDHEIPRKWLCATRS 273
           VIQES +G+WHVP ++ +DD +  R+WLCA RS
Sbjct: 538 VIQESEDGTWHVP-MSVEDDLQTSRQWLCAKRS 569


>AT4G21900.1 | Symbols: PRORP3 | proteinaceous RNase P 3 |
           chr4:11616567-11619349 REVERSE LENGTH=576
          Length = 576

 Score =  257 bits (656), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 127/250 (50%), Positives = 168/250 (67%), Gaps = 13/250 (5%)

Query: 37  VVKTHVNEDGMCLSCGEKLVSIDLDPKETENFATSLSKLACQR-------ETQSNFNNFQ 89
           V K +V+  G CLSC E L  +D +  ETE+F  SL  LA +R       E  ++F+ FQ
Sbjct: 329 VKKGNVSSAGKCLSCDEHLACVDTNEVETEDFVNSLVTLAMERKAKMNSCEPMADFSEFQ 388

Query: 90  KWLKQHGPFDAVVDGANVGLANQH----NFSFSQLNNVVKQLRQISPSKRLPLIILHVSR 145
           +WL++HG ++A++DGAN+GL  Q+     FS  QL  VVK+L   S SK+ PLI+LH  R
Sbjct: 389 EWLEKHGDYEAILDGANIGLYQQNFADGGFSLPQLEAVVKELYNKSGSKKQPLILLHKKR 448

Query: 146 VTGGPAQNPNNKRLLEHWRENGALYATPQGSNDDWFWLYAAVSCKCLLLTNDEMRDHLFQ 205
           V     +NPN++ L+E W  N  LYATP GSNDDW+WLYAA   KCLL+TNDEMRDH+F+
Sbjct: 449 VNA-LLENPNHRNLVEEWINNNVLYATPPGSNDDWYWLYAAAKLKCLLVTNDEMRDHIFE 507

Query: 206 LLGSNFFPRWKEKHQIRVSASAGRVSLVMPPRYSIVIQESANGSWHVPTVTSDDDHEIPR 265
           LL ++FF +WKE+HQ+R +   G + L MPP +S+VIQES  GSWHVP +TS D  E  R
Sbjct: 508 LLSNSFFQKWKERHQVRFTFVKGCLKLEMPPPFSVVIQESEKGSWHVP-ITSQDKEESLR 566

Query: 266 KWLCATRSSN 275
            W+C TR S+
Sbjct: 567 SWMCITRQSS 576


>AT2G16650.1 | Symbols: PRORP2 | proteinaceous RNase P 2 |
           chr2:7215937-7218061 REVERSE LENGTH=528
          Length = 528

 Score =  253 bits (645), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 123/249 (49%), Positives = 168/249 (67%), Gaps = 13/249 (5%)

Query: 37  VVKTHVNEDGMCLSCGEKLVSIDLDPKETENFATSLSKLACQRETQSN-------FNNFQ 89
           V K +V+  G CLSC E+L  +D +  ET+ F  SL  LA  R+T+ N       F+ FQ
Sbjct: 270 VKKGNVSSTGRCLSCSEQLACVDTNEVETQKFVDSLVALAMDRKTKMNSCETNVVFSEFQ 329

Query: 90  KWLKQHGPFDAVVDGANVGLANQH----NFSFSQLNNVVKQLRQISPSKRLPLIILHVSR 145
            WL++HG ++A+VDGAN+GL  Q+    +FS SQL +V+K+L + S + + PLI+LH  R
Sbjct: 330 DWLEKHGDYEAIVDGANIGLYQQNFVDGSFSLSQLESVMKELYRESGNNKWPLILLHKRR 389

Query: 146 VTGGPAQNPNNKRLLEHWRENGALYATPQGSNDDWFWLYAAVSCKCLLLTNDEMRDHLFQ 205
           V     +NP ++ L+E W  NG LYATP GSNDDW+WLYAA   KCLL+TNDEMRDH+F+
Sbjct: 390 VKT-LLENPTHRNLVEEWISNGVLYATPPGSNDDWYWLYAAAKLKCLLVTNDEMRDHIFE 448

Query: 206 LLGSNFFPRWKEKHQIRVSASAGRVSLVMPPRYSIVIQESANGSWHVPTVTSDDDHEIPR 265
           LLGS FF +WKE+HQ+R +   G + L MP  +S+VIQES  GSWH P V+ +++ E  R
Sbjct: 449 LLGSTFFQKWKERHQVRYTFVKGNLKLEMPSPFSVVIQESEKGSWHFP-VSCENNEESSR 507

Query: 266 KWLCATRSS 274
            W+C +R S
Sbjct: 508 TWMCISRQS 516


>AT5G60430.2 | Symbols:  | drug transmembrane
           transporters;antiporters | chr5:24302386-24303068
           FORWARD LENGTH=156
          Length = 156

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 59/95 (62%), Gaps = 11/95 (11%)

Query: 37  VVKTHVNEDGMCLSCGEKLVSIDLDPKETENFATSLSKLACQRETQSN-------FNNFQ 89
           V K +V+  G CLSC E+L  +D +  ET+ F  SL  LA +R+ + N       F+ FQ
Sbjct: 26  VKKGNVSSTGRCLSCSEQLACVDTNEVETQKFVDSLVALAMERKAKMNSCESDVVFSEFQ 85

Query: 90  KWLKQHGPFDAVVDGANVGLANQH----NFSFSQL 120
            WL++HG ++A+VDGAN+GL  Q+    +FS SQ+
Sbjct: 86  DWLEKHGDYEAIVDGANIGLYQQNFVDGSFSLSQV 120


>AT5G60430.1 | Symbols:  | drug transmembrane
           transporters;antiporters | chr5:24302386-24303068
           FORWARD LENGTH=156
          Length = 156

 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 59/95 (62%), Gaps = 11/95 (11%)

Query: 37  VVKTHVNEDGMCLSCGEKLVSIDLDPKETENFATSLSKLACQRETQSN-------FNNFQ 89
           V K +V+  G CLSC E+L  +D +  ET+ F  SL  LA +R+ + N       F+ FQ
Sbjct: 26  VKKGNVSSTGRCLSCSEQLACVDTNEVETQKFVDSLVALAMERKAKMNSCESDVVFSEFQ 85

Query: 90  KWLKQHGPFDAVVDGANVGLANQH----NFSFSQL 120
            WL++HG ++A+VDGAN+GL  Q+    +FS SQ+
Sbjct: 86  DWLEKHGDYEAIVDGANIGLYQQNFVDGSFSLSQV 120