Miyakogusa Predicted Gene
- Lj3g3v0260470.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj3g3v0260470.1 Non Chatacterized Hit- tr|K4BV49|K4BV49_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,38.02,2e-19,F-BOX AND WD40 DOMAIN PROTEIN,NULL; WD40
repeat-like,WD40-repeat-containing domain;
WD_REPEATS_2,WD4,CUFF.40830.1
(122 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G26490.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 101 1e-22
AT3G50390.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 99 6e-22
AT1G47610.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 94 1e-20
AT4G34380.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 94 2e-20
AT1G24130.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 93 3e-20
AT3G18950.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 93 5e-20
AT1G24530.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 91 1e-19
AT1G49450.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 91 2e-19
AT5G50120.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 89 1e-18
AT3G51930.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 84 3e-17
AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40 r... 57 3e-09
AT5G49200.1 | Symbols: | WD-40 repeat family protein / zfwd4 pr... 54 3e-08
AT3G18860.1 | Symbols: | transducin family protein / WD-40 repe... 53 4e-08
AT3G18860.2 | Symbols: | transducin family protein / WD-40 repe... 53 4e-08
AT1G49040.1 | Symbols: SCD1 | stomatal cytokinesis defective / S... 52 7e-08
AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 52 7e-08
AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 52 1e-07
AT5G40880.1 | Symbols: | WD-40 repeat family protein / zfwd3 pr... 52 1e-07
AT5G51980.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 50 5e-07
AT5G51980.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 49 5e-07
AT1G79990.1 | Symbols: | structural molecules | chr1:30084522-3... 49 1e-06
AT4G25440.1 | Symbols: ZFWD1 | zinc finger WD40 repeat protein 1... 48 2e-06
AT1G52360.2 | Symbols: | Coatomer, beta' subunit | chr1:1949942... 48 2e-06
AT1G52360.1 | Symbols: | Coatomer, beta' subunit | chr1:1949928... 47 2e-06
AT3G15980.5 | Symbols: | Coatomer, beta' subunit | chr3:5412015... 47 3e-06
AT3G15980.3 | Symbols: | Coatomer, beta' subunit | chr3:5412015... 47 3e-06
AT3G15980.2 | Symbols: | Coatomer, beta' subunit | chr3:5412015... 47 3e-06
AT3G18140.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 47 3e-06
AT3G15980.4 | Symbols: | Coatomer, beta' subunit | chr3:5411699... 47 3e-06
AT3G15980.1 | Symbols: | Coatomer, beta' subunit | chr3:5411699... 47 3e-06
AT3G15470.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 47 3e-06
AT2G47410.1 | Symbols: | WD40/YVTN repeat-like-containing domai... 47 3e-06
AT2G47410.2 | Symbols: | WD40/YVTN repeat-like-containing domai... 47 3e-06
AT5G54200.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 46 5e-06
AT1G79990.5 | Symbols: | structural molecules | chr1:30085910-3... 45 8e-06
AT1G79990.3 | Symbols: | structural molecules | chr1:30085910-3... 45 9e-06
>AT2G26490.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr2:11268035-11269432 FORWARD LENGTH=465
Length = 465
Score = 101 bits (251), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 79/121 (65%), Gaps = 1/121 (0%)
Query: 1 MKHKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVL 60
+KH ++ +++N + +LY+AS D+T+KVWRI+D KC E+I AH + +N++++ + ++
Sbjct: 203 IKHADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVVSTTEAIV 262
Query: 61 YTASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHY 120
++ S D TV+ W+R+ H+L TL + S V AL ++ +G V Y G SDG +++
Sbjct: 263 FSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQESAVTALAVSKNGAAV-YFGSSDGLVNF 321
Query: 121 W 121
W
Sbjct: 322 W 322
>AT3G50390.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:18702137-18703546 FORWARD LENGTH=469
Length = 469
Score = 99.0 bits (245), Expect = 6e-22, Method: Composition-based stats.
Identities = 45/120 (37%), Positives = 76/120 (63%), Gaps = 1/120 (0%)
Query: 2 KHKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVLY 61
+H I+ +A++ + +LY+ S DKT KVWR+SDL+C E++ AH + +NA+++ DG+++
Sbjct: 209 RHLDAISCLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAHEDAVNAVVSGFDGLVF 268
Query: 62 TASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHYW 121
T S D TV+VWRR + D H + TL + V A+ + ++Y G SDG +++W
Sbjct: 269 TGSADGTVKVWRREDQAKDTKHFFSETLLKQDCAVTAIAVD-QSATLVYCGSSDGTVNFW 327
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Query: 1 MKHKGLITSMAINTAEDILYTASLDKTVKVW-RISDLKCTETIKAHTEPINAIIAADDGV 59
+K +T++A++ + ++Y S D TV W R +++K +K H + ++AA + +
Sbjct: 297 LKQDCAVTAIAVDQSATLVYCGSSDGTVNFWERENNMKNGGVLKGHKLAVLCLVAAGN-L 355
Query: 60 LYTASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGV-------LYGG 112
+++ S D +RVWRR + +T HA PVK L + D V +Y G
Sbjct: 356 MFSGSADLGIRVWRRPEGGGEHVCLSVLTGHA--GPVKCLAVERDQESVSGERRWIVYSG 413
Query: 113 CSDGYIHYW 121
D + W
Sbjct: 414 SLDRSVKMW 422
>AT1G47610.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:17504836-17505891 FORWARD LENGTH=351
Length = 351
Score = 94.4 bits (233), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 75/121 (61%), Gaps = 4/121 (3%)
Query: 1 MKHKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVL 60
+KH ++ +++ + +LY+AS D+TVKVWRI DLKC E+IKAH + +N++ A+ ++
Sbjct: 132 IKHSDAVSCLSLAEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSVTTAES-LV 190
Query: 61 YTASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHY 120
+T S D TV+VW+R HSL TL + S V AL + +Y G SDG +++
Sbjct: 191 FTGSADGTVKVWKREIRGKRTAHSLFQTLLKQESAVTALVTSHMA---VYSGSSDGAVNF 247
Query: 121 W 121
W
Sbjct: 248 W 248
>AT4G34380.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:16438835-16440322 FORWARD LENGTH=495
Length = 495
Score = 94.4 bits (233), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 74/120 (61%), Gaps = 1/120 (0%)
Query: 2 KHKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVLY 61
KH ++S++++ +LY++S D T+KVWRI+D KC E+I AH + IN++++ D +++
Sbjct: 233 KHNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDDLVF 292
Query: 62 TASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHYW 121
T S D TV+VW+R H+L L + + V AL + ++Y G SDG ++YW
Sbjct: 293 TGSADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAVKSQ-SSIVYCGSSDGLVNYW 351
>AT1G24130.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:8534183-8535430 REVERSE LENGTH=415
Length = 415
Score = 93.2 bits (230), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/120 (41%), Positives = 72/120 (60%), Gaps = 6/120 (5%)
Query: 3 HKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETI-KAHTEPINAIIAADDGVLY 61
H ++S+A++ +LY+AS D++ K+WR SD KC ++I KAH + INAI+ + DG +Y
Sbjct: 191 HVDAVSSLALSQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVY 250
Query: 62 TASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHYW 121
T S D ++VW + D+ HSL TL S V AL ++ D G VLY G D I W
Sbjct: 251 TGSADKKIKVWNKK----DKKHSLVATLTKHLSAVNALAISED-GKVLYSGACDRSILVW 305
>AT3G18950.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:6536900-6538321 FORWARD LENGTH=473
Length = 473
Score = 92.8 bits (229), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 1 MKHKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVL 60
++H ++ +++N +LY+ S DKT+KVWR+SD KC E+I+AH + IN + A D +L
Sbjct: 246 IRHYDAVSCLSLNEELGLLYSGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFDDLL 305
Query: 61 YTASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHY 120
+T S D T++VW+R H L L + + V AL + V+Y G SDG +++
Sbjct: 306 FTGSADGTLKVWKRELQGKGTKHFLVNVLMKQENAVTALAVNIT-AAVVYCGSSDGTVNF 364
Query: 121 W 121
W
Sbjct: 365 W 365
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 55/132 (41%), Gaps = 15/132 (11%)
Query: 1 MKHKGLITSMAINTAEDILYTASLDKTVKVWRISD-LKCTETIKAHTEPINAIIAADDGV 59
MK + +T++A+N ++Y S D TV W L T++ H + + AA V
Sbjct: 335 MKQENAVTALAVNITAAVVYCGSSDGTVNFWEGQKYLSHGGTLRGHRLAVLCLAAAGSLV 394
Query: 60 LYTASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGG----------VL 109
L + D + VWRRN D HS L PVK LT D G ++
Sbjct: 395 L-SGGADKNICVWRRN---GDGSHSCLSVLMDHVGPVKCLTAVEDDGEGHREKGDQKWIV 450
Query: 110 YGGCSDGYIHYW 121
Y G D + W
Sbjct: 451 YSGSLDKSVKVW 462
>AT1G24530.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:8693287-8694543 FORWARD LENGTH=418
Length = 418
Score = 91.3 bits (225), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/121 (39%), Positives = 74/121 (61%), Gaps = 5/121 (4%)
Query: 1 MKHKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVL 60
++H +T++A+ ++ +Y+ S DKT+K+WR SDL+C E+IKAH + +NAI + +G +
Sbjct: 192 IEHADAVTALAV--SDGFIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVSTNGTV 249
Query: 61 YTASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHY 120
YT S D +RVW + + ++ H+L TL S V AL L D G VL+ G D I
Sbjct: 250 YTGSADRRIRVWAKP--TGEKRHTLVATLEKHKSAVNALALN-DDGSVLFSGSCDRSILV 306
Query: 121 W 121
W
Sbjct: 307 W 307
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 12/128 (9%)
Query: 2 KHKGLITSMAINTAEDILYTASLDKTVKVWRISD----LKCTETIKAHTEPINAIIAADD 57
KHK + ++A+N +L++ S D+++ VW D + ++ H + I ++ D
Sbjct: 278 KHKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSLFNVSD 337
Query: 58 GVLYTASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTP----DGGGVLYGGC 113
+L + S D TVR+WRR D +S L PVK+L D + G
Sbjct: 338 -LLLSGSADRTVRIWRRG---PDSSYSCLEVLSGHTKPVKSLAAVREKELDDVVSIISGS 393
Query: 114 SDGYIHYW 121
DG + W
Sbjct: 394 LDGEVKCW 401
>AT1G49450.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:18305684-18307099 FORWARD LENGTH=471
Length = 471
Score = 90.9 bits (224), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Query: 1 MKHKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVL 60
++H ++ +++N +LY+ S DKT+KVWR+SD KC E+I+AH + +N +++ D ++
Sbjct: 242 IRHFDAVSCLSLNEDLGLLYSGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDDLV 301
Query: 61 YTASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHY 120
+T S D T++VW+R + H L L + + V AL + V+Y G SDG +++
Sbjct: 302 FTGSADGTLKVWKREVQGKEMKHVLVQVLMKQENAVTALAVNLT-DAVVYCGSSDGTVNF 360
Query: 121 W 121
W
Sbjct: 361 W 361
>AT5G50120.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:20382630-20383796 REVERSE LENGTH=388
Length = 388
Score = 88.6 bits (218), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 71/124 (57%), Gaps = 5/124 (4%)
Query: 3 HKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETI-KAHTEPINAIIAADDGVLY 61
H ++ +A++ +LY+ S D+T+K+WR +D KC E+ AH + INA+ +++G +Y
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDIY 223
Query: 62 TASDDATVRVWRRNFCSHD----QPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGY 117
T S D ++VWR+N + + HSL L S + AL L+ G +L+ G SDG
Sbjct: 224 TGSSDQRIKVWRKNINEENVKKKRKHSLVAILSEHNSGINALALSGTNGSLLHSGGSDGS 283
Query: 118 IHYW 121
I W
Sbjct: 284 ILVW 287
>AT3G51930.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:19271672-19272919 FORWARD LENGTH=415
Length = 415
Score = 83.6 bits (205), Expect = 3e-17, Method: Composition-based stats.
Identities = 46/129 (35%), Positives = 71/129 (55%), Gaps = 11/129 (8%)
Query: 1 MKHKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVL 60
++H I+ +A++ I+Y+ S DKT+KVWR+SDLKC E+IKAH + IN ++A DG +
Sbjct: 171 IEHADSISCLAVHAG--IIYSGSWDKTLKVWRLSDLKCLESIKAHDDAINGLVAG-DGRV 227
Query: 61 YTASDDATVRVWRRNFCSHDQP--------HSLTVTLHAKYSPVKALTLTPDGGGVLYGG 112
Y+AS D V++W + + H L TL + + G +YGG
Sbjct: 228 YSASADGKVKIWGKEKRKQIESTSSSSSSLHVLKATLEGRAEVSVNSVVVSGDGNWVYGG 287
Query: 113 CSDGYIHYW 121
SDG++ W
Sbjct: 288 GSDGFVIGW 296
>AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40
repeat family protein | chr5:5504541-5509266 REVERSE
LENGTH=876
Length = 876
Score = 57.0 bits (136), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 6/122 (4%)
Query: 3 HKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDG---V 59
H+G + MA + + +L TA D+ V VW + CT + H +++I+ D +
Sbjct: 101 HEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNI 160
Query: 60 LYTASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIH 119
L + SDDATVRVW N + + + +S V ++ L+ D G L+ D ++
Sbjct: 161 LISGSDDATVRVWDLN--AKNTEKKCLAIMEKHFSAVTSIALSED-GLTLFSAGRDKVVN 217
Query: 120 YW 121
W
Sbjct: 218 LW 219
Score = 50.8 bits (120), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 12/119 (10%)
Query: 7 ITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIA-ADDGVLYTASD 65
+T++A++ + +L++A + ++VW + LKC + K H P+ + A G+L TA
Sbjct: 63 LTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGA 122
Query: 66 DATVRVWRRN--FCSHDQPHSLTVTLHAKYSPVKALTLTPDGG-GVLYGGCSDGYIHYW 121
D V VW + FC+H V ++ PD +L G D + W
Sbjct: 123 DRKVLVWDVDGGFCTH--------YFRGHKGVVSSILFHPDSNKNILISGSDDATVRVW 173
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Query: 3 HKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPI-NAIIAADDGVLY 61
HK I S+ +T + + TAS DKTVK+W ISD C +T + HT + A D
Sbjct: 540 HKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFV 599
Query: 62 TASDDATVRVWRRN 75
+ D +++W N
Sbjct: 600 SCGADGLLKLWNVN 613
Score = 46.2 bits (108), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Query: 3 HKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAI-IAADDGVLY 61
H I S+A+ + ++ T S D+T +WR+ DL T+K H I ++ + D +
Sbjct: 498 HDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVM 557
Query: 62 TASDDATVRVW 72
TAS D TV++W
Sbjct: 558 TASGDKTVKIW 568
>AT5G49200.1 | Symbols: | WD-40 repeat family protein / zfwd4
protein (ZFWD4) | chr5:19947796-19949055 REVERSE
LENGTH=419
Length = 419
Score = 53.5 bits (127), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 3 HKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVLYT 62
H G +T A+ +LY+ S+DKT+K+W ++ L+C T+K HT + +++ D L +
Sbjct: 257 HSGEVTCFAV--GGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLLCWDK-CLIS 313
Query: 63 ASDDATVRVW 72
+S D T++VW
Sbjct: 314 SSLDGTIKVW 323
>AT3G18860.1 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:6501774-6508352 FORWARD LENGTH=760
Length = 760
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 14/119 (11%)
Query: 3 HKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVLYT 62
H+ +T +AI+ EDI+ ++S+D+T+K WR L E+ AH PI A+I G L +
Sbjct: 112 HQMQVTGVAIDN-EDIV-SSSVDQTLKRWRNGQL--VESWDAHQSPIQAVIRLPSGELVS 167
Query: 63 ASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHYW 121
S DA++++W+ TL V+ L + PD G DG I W
Sbjct: 168 GSSDASLKLWKGKTSLQ--------TLSGHTDTVRGLAVMPDLG--FLSASHDGSIRLW 216
>AT3G18860.2 | Symbols: | transducin family protein / WD-40 repeat
family protein | chr3:6501774-6508352 FORWARD LENGTH=760
Length = 760
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 14/119 (11%)
Query: 3 HKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVLYT 62
H+ +T +AI+ EDI+ ++S+D+T+K WR L E+ AH PI A+I G L +
Sbjct: 112 HQMQVTGVAIDN-EDIV-SSSVDQTLKRWRNGQL--VESWDAHQSPIQAVIRLPSGELVS 167
Query: 63 ASDDATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHYW 121
S DA++++W+ TL V+ L + PD G DG I W
Sbjct: 168 GSSDASLKLWKGKTSLQ--------TLSGHTDTVRGLAVMPDLG--FLSASHDGSIRLW 216
>AT1G49040.1 | Symbols: SCD1 | stomatal cytokinesis defective / SCD1
protein (SCD1) | chr1:18139419-18148826 REVERSE
LENGTH=1187
Length = 1187
Score = 52.4 bits (124), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 7 ITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVLYTASDD 66
I S+ + + IL A D +W I K +K HT+ I +I +D L T SDD
Sbjct: 983 ILSLEYDDSTGILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSIRMVED-TLITGSDD 1041
Query: 67 ATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHYW 121
T RVW + S D + HA PV+++ +P G++ G +DG + +W
Sbjct: 1042 WTARVWSVSRGSCDA----VLACHA--GPVQSVEYSPFDKGIITGS-ADGLLRFW 1089
>AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:18413690-18415223 FORWARD LENGTH=317
Length = 317
Score = 52.4 bits (124), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/120 (24%), Positives = 55/120 (45%), Gaps = 7/120 (5%)
Query: 3 HKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVLYT 62
H + N +++ + S D+TV++W ++ KC + + AH++P+ A+ DG L
Sbjct: 112 HTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIV 171
Query: 63 ASD-DATVRVWRRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHYW 121
+S D R+W H + + + PV + +P+G +L G D + W
Sbjct: 172 SSSYDGLCRIWDSG-----TGHCVKTLIDDENPPVSFVRFSPNGKFILVGTL-DNTLRLW 225
>AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:1207759-1209066 FORWARD LENGTH=333
Length = 333
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 3 HKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDG-VLY 61
H + + N +++ + S D+T+++W + KC IKAH+ PI+++ DG ++
Sbjct: 127 HTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIV 186
Query: 62 TASDDATVRVW--RRNFCSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVL 109
+AS D + ++W + C L + K V +P+G +L
Sbjct: 187 SASHDGSCKIWDAKEGTC-------LKTLIDDKSPAVSFAKFSPNGKFIL 229
>AT5G40880.1 | Symbols: | WD-40 repeat family protein / zfwd3
protein (ZFWD3) | chr5:16379481-16381205 FORWARD
LENGTH=472
Length = 472
Score = 51.6 bits (122), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 3 HKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVLYT 62
H G +T + ++LY+ S+DKT+KVW ++ L+C T+K H + +++ D L +
Sbjct: 311 HSGEVTCFVV--GGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLLCWDK-CLIS 367
Query: 63 ASDDATVRVWRRNFCSHDQ 81
+S D T+++W CS ++
Sbjct: 368 SSLDGTIKLWA---CSENE 383
>AT5G51980.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:21113650-21115902 REVERSE LENGTH=443
Length = 443
Score = 49.7 bits (117), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 19 LYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVLYTASDDATVRVW 72
LY+ S+DKT+KVW + +L+C +T+ H+ + ++I D L + S D TV++W
Sbjct: 287 LYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLICWDQ-FLLSCSLDNTVKIW 339
>AT5G51980.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:21113650-21115902 REVERSE LENGTH=437
Length = 437
Score = 49.3 bits (116), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 19 LYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVLYTASDDATVRVW 72
LY+ S+DKT+KVW + +L+C +T+ H+ + ++I D L + S D TV++W
Sbjct: 287 LYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLICWDQ-FLLSCSLDNTVKIW 339
>AT1G79990.1 | Symbols: | structural molecules |
chr1:30084522-30091949 FORWARD LENGTH=1135
Length = 1135
Score = 48.5 bits (114), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 21 TASLDKTVKVWRISDLKCTETIKAHTEPINAI---IAADDGVLYTASDDATVRVWRRNFC 77
+ASLD+T+K+W + T+ AH + +N + D L T SDD T +VW
Sbjct: 375 SASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY--- 431
Query: 78 SHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHYW 121
Q S TL V A++ P+ ++ G DG + W
Sbjct: 432 ---QTKSCVQTLEGHTHNVSAVSFHPE-LPIIITGSEDGTVRIW 471
>AT4G25440.1 | Symbols: ZFWD1 | zinc finger WD40 repeat protein 1 |
chr4:13007107-13009381 REVERSE LENGTH=430
Length = 430
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Query: 19 LYTASLDKTVKVWRISDLKCTETIKAHTEPINAIIAADDGVLYTASDDATVRVWRRNFCS 78
LY+ ++D ++KVW + +L+C +T+ HT + ++I D L + S D TV++W +
Sbjct: 280 LYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLICWDQ-FLLSCSLDNTVKIW-----A 333
Query: 79 HDQPHSLTVTL-HAKYSPVKALTLTPDGGG--VLYGGCSDGYIHYW 121
+ +L VT H + V AL D VL C+D +H +
Sbjct: 334 ATEGGNLEVTYTHKEEYGVLALCGVHDAEAKPVLLCSCNDNSLHLY 379
>AT1G52360.2 | Symbols: | Coatomer, beta' subunit |
chr1:19499420-19505397 FORWARD LENGTH=970
Length = 970
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 21 TASLDKTVKVWRISDLKCTETIKAHTEPINAI---IAADDGVLYTASDDATVRVWRRNFC 77
+ASLD+T+K+W + T+ AH + +N + D L T SDD T +VW
Sbjct: 204 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY--- 260
Query: 78 SHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHYW 121
Q S TL V A+ P+ ++ G DG + W
Sbjct: 261 ---QTKSCVQTLEGHTHNVSAVCFHPE-LPIIITGSEDGTVRIW 300
>AT1G52360.1 | Symbols: | Coatomer, beta' subunit |
chr1:19499282-19505397 FORWARD LENGTH=926
Length = 926
Score = 47.4 bits (111), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 21 TASLDKTVKVWRISDLKCTETIKAHTEPINAI---IAADDGVLYTASDDATVRVWRRNFC 77
+ASLD+T+K+W + T+ AH + +N + D L T SDD T +VW
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY--- 216
Query: 78 SHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHYW 121
Q S TL V A+ P+ ++ G DG + W
Sbjct: 217 ---QTKSCVQTLEGHTHNVSAVCFHPE-LPIIITGSEDGTVRIW 256
>AT3G15980.5 | Symbols: | Coatomer, beta' subunit |
chr3:5412015-5418313 REVERSE LENGTH=930
Length = 930
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 21 TASLDKTVKVWRISDLKCTETIKAHTEPINAI---IAADDGVLYTASDDATVRVWRRNFC 77
+ASLD+T+K+W + T+ AH + +N + D L T SDD T +VW
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY--- 216
Query: 78 SHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHYW 121
Q S TL V A+ P+ ++ G DG + W
Sbjct: 217 ---QTKSCVQTLDGHTHNVSAVCFHPE-LPIIITGSEDGTVRIW 256
>AT3G15980.3 | Symbols: | Coatomer, beta' subunit |
chr3:5412015-5418313 REVERSE LENGTH=918
Length = 918
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 21 TASLDKTVKVWRISDLKCTETIKAHTEPINAI---IAADDGVLYTASDDATVRVWRRNFC 77
+ASLD+T+K+W + T+ AH + +N + D L T SDD T +VW
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY--- 216
Query: 78 SHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHYW 121
Q S TL V A+ P+ ++ G DG + W
Sbjct: 217 ---QTKSCVQTLDGHTHNVSAVCFHPE-LPIIITGSEDGTVRIW 256
>AT3G15980.2 | Symbols: | Coatomer, beta' subunit |
chr3:5412015-5418313 REVERSE LENGTH=918
Length = 918
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 21 TASLDKTVKVWRISDLKCTETIKAHTEPINAI---IAADDGVLYTASDDATVRVWRRNFC 77
+ASLD+T+K+W + T+ AH + +N + D L T SDD T +VW
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY--- 216
Query: 78 SHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHYW 121
Q S TL V A+ P+ ++ G DG + W
Sbjct: 217 ---QTKSCVQTLDGHTHNVSAVCFHPE-LPIIITGSEDGTVRIW 256
>AT3G18140.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:6212743-6214567 REVERSE LENGTH=305
Length = 305
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 3 HKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPI-NAIIAADDGVLY 61
H G I ++ A L TAS DKTVK+W + K + + H + + + + D L
Sbjct: 210 HNGHILKCLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLV 269
Query: 62 TASDDATVRVW 72
TAS D T R+W
Sbjct: 270 TASSDMTARLW 280
>AT3G15980.4 | Symbols: | Coatomer, beta' subunit |
chr3:5411699-5418313 REVERSE LENGTH=914
Length = 914
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 21 TASLDKTVKVWRISDLKCTETIKAHTEPINAI---IAADDGVLYTASDDATVRVWRRNFC 77
+ASLD+T+K+W + T+ AH + +N + D L T SDD T +VW
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY--- 216
Query: 78 SHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHYW 121
Q S TL V A+ P+ ++ G DG + W
Sbjct: 217 ---QTKSCVQTLDGHTHNVSAVCFHPE-LPIIITGSEDGTVRIW 256
>AT3G15980.1 | Symbols: | Coatomer, beta' subunit |
chr3:5411699-5418313 REVERSE LENGTH=909
Length = 909
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 21 TASLDKTVKVWRISDLKCTETIKAHTEPINAI---IAADDGVLYTASDDATVRVWRRNFC 77
+ASLD+T+K+W + T+ AH + +N + D L T SDD T +VW
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY--- 216
Query: 78 SHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHYW 121
Q S TL V A+ P+ ++ G DG + W
Sbjct: 217 ---QTKSCVQTLDGHTHNVSAVCFHPE-LPIIITGSEDGTVRIW 256
>AT3G15470.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:5216630-5219868 REVERSE LENGTH=883
Length = 883
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 19 LYTASLDKTVKVWRISDLKCTETIKAHTEPINAII--AADDGVLYTASDDATVRVWRRNF 76
L ++S+DKTV++W +S C + +H++ + I DD + S DA VRVW
Sbjct: 527 LLSSSMDKTVRLWNLSSQTCLKVF-SHSDYVTCIQFNPVDDRYFISGSLDAKVRVW---- 581
Query: 77 CSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYG 111
P V + + V + TPDG GVL G
Sbjct: 582 ---SIPDRQVVDWYDLHEMVTSACYTPDGQGVLVG 613
>AT2G47410.1 | Symbols: | WD40/YVTN repeat-like-containing
domain;Bromodomain | chr2:19449133-19456991 FORWARD
LENGTH=1520
Length = 1520
Score = 47.0 bits (110), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 3 HKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAII----AADDG 58
H+G IT +A+++ ++ +AS D ++VWR+ D ++ HT + AI A
Sbjct: 277 HEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVY 336
Query: 59 VLYTASDDATVRVW 72
L ++SDD T R+W
Sbjct: 337 QLLSSSDDGTCRIW 350
>AT2G47410.2 | Symbols: | WD40/YVTN repeat-like-containing
domain;Bromodomain | chr2:19449133-19456991 FORWARD
LENGTH=1519
Length = 1519
Score = 46.6 bits (109), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 3 HKGLITSMAINTAEDILYTASLDKTVKVWRISDLKCTETIKAHTEPINAII----AADDG 58
H+G IT +A+++ ++ +AS D ++VWR+ D ++ HT + AI A
Sbjct: 276 HEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVY 335
Query: 59 VLYTASDDATVRVW 72
L ++SDD T R+W
Sbjct: 336 QLLSSSDDGTCRIW 349
>AT5G54200.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:21993565-21997076 REVERSE LENGTH=825
Length = 825
Score = 46.2 bits (108), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 19 LYTASLDKTVKVWRISDLKCTETIKAHTEPINAII--AADDGVLYTASDDATVRVWRRNF 76
L ++S+DKTV++W +S C + +H++ + I DD + S DA VR+W
Sbjct: 482 LLSSSMDKTVRLWDLSSKTCLKVF-SHSDYVTCIQFNPVDDNYFISGSLDAKVRIW---- 536
Query: 77 CSHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYG 111
P V + + V A TPDG G L G
Sbjct: 537 ---SIPDHQVVDWNDLHEMVTAACYTPDGQGALVG 568
>AT1G79990.5 | Symbols: | structural molecules |
chr1:30085910-30091949 FORWARD LENGTH=912
Length = 912
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 21 TASLDKTVKVWRISDLKCTETIKAHTEPINAI---IAADDGVLYTASDDATVRVWRRNFC 77
+ASLD+T+K+W + T+ AH + +N + D L T SDD T +VW
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY--- 216
Query: 78 SHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHYW 121
Q S TL V A++ P+ ++ G DG + W
Sbjct: 217 ---QTKSCVQTLEGHTHNVSAVSFHPE-LPIIITGSEDGTVRIW 256
>AT1G79990.3 | Symbols: | structural molecules |
chr1:30085910-30091949 FORWARD LENGTH=920
Length = 920
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 21 TASLDKTVKVWRISDLKCTETIKAHTEPINAI---IAADDGVLYTASDDATVRVWRRNFC 77
+ASLD+T+K+W + T+ AH + +N + D L T SDD T +VW
Sbjct: 160 SASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKVWDY--- 216
Query: 78 SHDQPHSLTVTLHAKYSPVKALTLTPDGGGVLYGGCSDGYIHYW 121
Q S TL V A++ P+ ++ G DG + W
Sbjct: 217 ---QTKSCVQTLEGHTHNVSAVSFHPE-LPIIITGSEDGTVRIW 256