Miyakogusa Predicted Gene

Lj3g3v0211980.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0211980.1 tr|Q84S31|Q84S31_VITVI Chitinase III OS=Vitis
vinifera PE=3 SV=1,64.97,0,no description,Glycoside hydrolase,
catalytic domain; seg,NULL; (Trans)glycosidases,Glycoside
hydrol,CUFF.40355.1
         (157 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G24090.1 | Symbols: ATCHIA, CHIA | chitinase A | chr5:8143805...   179   5e-46

>AT5G24090.1 | Symbols: ATCHIA, CHIA | chitinase A |
           chr5:8143805-8145153 REVERSE LENGTH=302
          Length = 302

 Score =  179 bits (455), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 80/125 (64%), Positives = 104/125 (83%), Gaps = 1/125 (0%)

Query: 33  IAIYWGQNDDEWSLRETCATGKYSYVIIAFLNKFGNGKTPEMNLASHCDPSSNDCTALST 92
           IAIYWGQN +E +L  TCATG+Y+YV +AFL KFGNG+TPE+NLA HC+P++N CT   +
Sbjct: 32  IAIYWGQNGNEGNLSATCATGRYAYVNVAFLVKFGNGQTPELNLAGHCNPAANTCTHFGS 91

Query: 93  DIRSCQMQGIKVLLSIGGAVGDYSLASSDDAATVSDYLWNNFLGGNNSNSRPLGDAVLDG 152
            ++ CQ +GIKV+LS+GG +G+YS+ S +DA  ++DYLWNNFLGG  S+SRPLGDAVLDG
Sbjct: 92  QVKDCQSRGIKVMLSLGGGIGNYSIGSREDAKVIADYLWNNFLGG-KSSSRPLGDAVLDG 150

Query: 153 IDFDI 157
           IDF+I
Sbjct: 151 IDFNI 155