Miyakogusa Predicted Gene

Lj3g3v0140670.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0140670.1 Non Chatacterized Hit- tr|I3S5E4|I3S5E4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.68,0,SYS1,Integral membrane protein SYS1-related;
SYS1,NULL,CUFF.40330.1
         (152 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79990.1 | Symbols:  | structural molecules | chr1:30084522-3...   248   8e-67
AT1G79990.4 | Symbols:  | structural molecules | chr1:30084522-3...   234   2e-62
AT1G79990.2 | Symbols:  | structural molecules | chr1:30084522-3...   234   2e-62

>AT1G79990.1 | Symbols:  | structural molecules |
           chr1:30084522-30091949 FORWARD LENGTH=1135
          Length = 1135

 Score =  248 bits (634), Expect = 8e-67,   Method: Composition-based stats.
 Identities = 109/150 (72%), Positives = 126/150 (84%)

Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYITLGLFFTILVGTRVSRMSLVYFFDFATLTTSTIT 60
           MFYG  VWDPWLIV QI+CLQC YY+TLGLF  + +G RV R+SLVYFFD+ATLTTST T
Sbjct: 1   MFYGTAVWDPWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFT 60

Query: 61  GWCVIASFLLTSIAGSVYMLYFIERAKKCLDFSATLYTIHLFICIVYGGWPSSIAWWAVN 120
           GW VIASFL +S+AG+VYM++ +ERA+KCLDFSATLY IHLF CI+YGGWPSS+AWW VN
Sbjct: 61  GWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGGWPSSMAWWVVN 120

Query: 121 VAGFAVMALLGECLCIRRELREIPITRFRS 150
             G AVMALL E LCI+RE REIP+ RF S
Sbjct: 121 GTGLAVMALLAEYLCIKREQREIPMDRFHS 150


>AT1G79990.4 | Symbols:  | structural molecules |
           chr1:30084522-30085194 FORWARD LENGTH=152
          Length = 152

 Score =  234 bits (597), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 110/152 (72%), Positives = 127/152 (83%)

Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYITLGLFFTILVGTRVSRMSLVYFFDFATLTTSTIT 60
           MFYG  VWDPWLIV QI+CLQC YY+TLGLF  + +G RV R+SLVYFFD+ATLTTST T
Sbjct: 1   MFYGTAVWDPWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFT 60

Query: 61  GWCVIASFLLTSIAGSVYMLYFIERAKKCLDFSATLYTIHLFICIVYGGWPSSIAWWAVN 120
           GW VIASFL +S+AG+VYM++ +ERA+KCLDFSATLY IHLF CI+YGGWPSS+AWW VN
Sbjct: 61  GWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGGWPSSMAWWVVN 120

Query: 121 VAGFAVMALLGECLCIRRELREIPITRFRSIV 152
             G AVMALL E LCI+RE REIP+ RF S V
Sbjct: 121 GTGLAVMALLAEYLCIKREQREIPMDRFHSRV 152


>AT1G79990.2 | Symbols:  | structural molecules |
           chr1:30084522-30085194 FORWARD LENGTH=152
          Length = 152

 Score =  234 bits (597), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 110/152 (72%), Positives = 127/152 (83%)

Query: 1   MFYGAVVWDPWLIVAQIVCLQCLYYITLGLFFTILVGTRVSRMSLVYFFDFATLTTSTIT 60
           MFYG  VWDPWLIV QI+CLQC YY+TLGLF  + +G RV R+SLVYFFD+ATLTTST T
Sbjct: 1   MFYGTAVWDPWLIVGQIICLQCSYYLTLGLFTMVFLGLRVPRLSLVYFFDYATLTTSTFT 60

Query: 61  GWCVIASFLLTSIAGSVYMLYFIERAKKCLDFSATLYTIHLFICIVYGGWPSSIAWWAVN 120
           GW VIASFL +S+AG+VYM++ +ERA+KCLDFSATLY IHLF CI+YGGWPSS+AWW VN
Sbjct: 61  GWSVIASFLFSSLAGAVYMIFLVERARKCLDFSATLYIIHLFFCIMYGGWPSSMAWWVVN 120

Query: 121 VAGFAVMALLGECLCIRRELREIPITRFRSIV 152
             G AVMALL E LCI+RE REIP+ RF S V
Sbjct: 121 GTGLAVMALLAEYLCIKREQREIPMDRFHSRV 152