Miyakogusa Predicted Gene

Lj3g3v0126180.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0126180.1 Non Chatacterized Hit- tr|G7IMF6|G7IMF6_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,71.81,0,seg,NULL; coiled-coil,NULL,CUFF.40302.1
         (734 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G15550.1 | Symbols:  | unknown protein; Has 25732 Blast hits ...   617   e-176

>AT3G15550.1 | Symbols:  | unknown protein; Has 25732 Blast hits to
           16979 proteins in 961 species: Archae - 144; Bacteria -
           1801; Metazoa - 12681; Fungi - 1868; Plants - 912;
           Viruses - 94; Other Eukaryotes - 8232 (source: NCBI
           BLink). | chr3:5267351-5270095 FORWARD LENGTH=729
          Length = 729

 Score =  617 bits (1590), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 374/757 (49%), Positives = 474/757 (62%), Gaps = 87/757 (11%)

Query: 1   MAEDYGFAQDEMAVNENLGYPKAYAKLCRDQNFSPYSHGPPFTFTPYALHEHEDERASVL 60
           M  DYG  ++++ + E  GYP+AY K+CRD +  PY +GPPFTF PY L ++E  R   +
Sbjct: 1   MMGDYGITEEDLVIEEAQGYPRAYTKICRDFDAFPYKNGPPFTFMPYILQQNESLRCREV 60

Query: 61  DQMFPLIDPKAKPTTKPKIFVGILWKQLNHLGNAGFDPAVIRVDGYGNVLYYHADSASPL 120
           DQMFP+IDPKA+PTTKPKIF+ +LWKQLNHLGNAGFDPAVIR+D YGNV+Y+HADSASPL
Sbjct: 61  DQMFPVIDPKARPTTKPKIFLSLLWKQLNHLGNAGFDPAVIRIDPYGNVVYFHADSASPL 120

Query: 121 AWDIDHWFPCSRGGLTVLSNLRILQRQACKRKKNKLEFLVPWWDFQLGISVNQFLSIFAS 180
           AW  DHWFPCSRGGLTV SNLRI+Q QA K KK+KLEFLVPWWD Q+GISVNQFLSIFA+
Sbjct: 121 AWSFDHWFPCSRGGLTVPSNLRIVQWQARKNKKDKLEFLVPWWDLQVGISVNQFLSIFAA 180

Query: 181 SNSDFRHRGFSFLFSEGENHELNASQIVDSHSFPQHFIGLKQEVGLAPAAIVESRRDPYD 240
           S+SDFR R FSFLF EGEN ELN  Q+V+SH FPQHF+  K + GLA AA+V SRRDPYD
Sbjct: 181 SSSDFRRRAFSFLFKEGENEELNGIQMVESHHFPQHFVESKDKFGLASAAVVFSRRDPYD 240

Query: 241 -ALALRQLDHNRRQRPMSPAIVAARRSNGNLLKENEDPGFAKNPYQAIVMARDSLKQREE 299
            +L LR LD+N RQ P       AR+      KENE P   KNPYQAIV ARDSL+ REE
Sbjct: 241 PSLVLRSLDYN-RQTP-------ARKMRFGATKENETPDLMKNPYQAIVAARDSLRHREE 292

Query: 300 TSKMQAEMQKLDHEVYEMKLKNEEEKLTIQDLELALIKRRRKAEKCRRLAEAQSSYRTML 359
              M+AEM+KLD E  ++  KN E++LTIQ+LE  L+KRRR+AEKCRRLAE+Q SYR  L
Sbjct: 293 AQNMRAEMKKLDDETNDLTRKNNEDRLTIQELENELVKRRRRAEKCRRLAESQCSYRNTL 352

Query: 360 EKMIRDTMHQSVIYKEQVXXXXXXXXXXXXXXXXXREICDNAEKDLHKKYRQRDDIEKQI 419
           EKMIRD MHQSV+YKEQV                 + ICD +EK+LHKK+++R+++E  +
Sbjct: 353 EKMIRDAMHQSVVYKEQVRLNQAASSALMARLEAQKAICDGSEKELHKKFKEREELENLV 412

Query: 420 RPEWEQGRKRSRIDYSTCEERDSKPV-----LYLPSIRPRTSLHKELRVFLEEEQKASEV 474
           +PE E+ RKRSR+  +  ++           LYLP     TS HKELRV  EEE KA+  
Sbjct: 413 KPELEKARKRSRLLLNDEDDLLLDDRDRNLSLYLPGTSEETSSHKELRVHFEEEHKAA-- 470

Query: 475 GLSSENEEQRLEELKIPANNDNDTEEKLEELKMSTNNDYTEEKLDEEQHTRAHVALDEES 534
             +SE E +                      K     +  EE+   E   ++ VAL+++ 
Sbjct: 471 --ASEAEIK----------------------KHCEIEEEEEEQKTPEVSEKSLVALEDDK 506

Query: 535 SIEHRLQKLEINESKRHYGTSFADLHESKT---EEDEETRKQRGKGNIEKWLEMLLENSK 591
            +E   +K ++ E KR    SF   H  K    EEDEE+R++RGKGN+EKWL +LLEN+ 
Sbjct: 507 PVE---EKPDVEEGKRS-NRSFRAFHVFKAPENEEDEESRRERGKGNVEKWLHILLENNS 562

Query: 592 KDEMDPQEANENASSRTEEIIQKLNQKFP--------QQELKI---------SKVSDSDY 634
           K   DP +     S + +E+I+KL+ KFP        + +LK+         SKV D + 
Sbjct: 563 KS--DPHDLQTEKSKKIDEMIEKLDHKFPFLEKVDEEEVDLKLQAKEANNNTSKV-DEEE 619

Query: 635 KEKQLHLPQDKNSWEENEGRVENEAISVMPARYKNYSEEACTGEGNGPNSFEGLERKEQH 694
            + QL   +  N+  + E R E+   S M    KN      T E +G             
Sbjct: 620 VDLQLQAKETNNNTSKVEIRTESSRRSRMSFDLKN------TPEKSG------------- 660

Query: 695 KKGKSLVRSESARTLRRIXXXXXXXXGMRKGVDRIRK 731
            + K + RSESART  RI        GM+KG+D IRK
Sbjct: 661 -RDKVVKRSESARTFTRIPSSPSLIFGMKKGIDCIRK 696