Miyakogusa Predicted Gene

Lj3g3v0116140.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0116140.1 tr|G7ID03|G7ID03_MEDTR Histidine decarboxylase
OS=Medicago truncatula GN=MTR_1g099020 PE=3
SV=1,68.18,0,Pyridoxal_deC,Pyridoxal phosphate-dependent
decarboxylase; DDC_GAD_HDC_YDC,Pyridoxal-phosphate bindi,CUFF.40299.1
         (480 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G43710.1 | Symbols: emb1075 | Pyridoxal phosphate (PLP)-depen...   521   e-148

>AT1G43710.1 | Symbols: emb1075 | Pyridoxal phosphate
           (PLP)-dependent transferases superfamily protein |
           chr1:16486534-16488298 REVERSE LENGTH=482
          Length = 482

 Score =  521 bits (1343), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 236/401 (58%), Positives = 305/401 (76%), Gaps = 1/401 (0%)

Query: 55  GETRVNLSKTIAKYVVKLNQNKSRCLGFPVNQEFDYDALMPLLHYHLNNAGDPFLGSGYG 114
           G+    ++  +A+Y   L +     LG+P N +FDY AL  L H+ +NN GDPF+ S YG
Sbjct: 82  GDKEAYMASVLARYRKTLVERTKNHLGYPYNLDFDYGALGQLQHFSINNLGDPFIESNYG 141

Query: 115 QNSVEFEVCVLDWFAKLWQIEKGEYWGYVTTGGTEGNLHGILMGREKFQDGILYTSHNSH 174
            +S  FEV VLDWFA+LW+IE+ +YWGY+T  GTEGNLHGIL+GRE F DGILY S  SH
Sbjct: 142 VHSRPFEVGVLDWFARLWEIERDDYWGYITNCGTEGNLHGILVGREMFPDGILYASRESH 201

Query: 175 YSLFKIARMYRMQCVKVNTLVSGEIDCANLKALLLSHKDKPAIINLNIGTTMKGAIDDID 234
           YS+FK ARMYRM+C KV+TL+SGEIDC +L+  LL++KDKPAI+N+NIGTT+KGA+DD+D
Sbjct: 202 YSVFKAARMYRMECEKVDTLMSGEIDCDDLRKKLLANKDKPAILNVNIGTTVKGAVDDLD 261

Query: 235 LVIQTLEESGFPHDRFYIHCDGALSGIMLPFLKQAPRINFKKPIGSISISGHKFLGCPIP 294
           LVI+TLEE GF HDRFYIHCDGAL G+M+PF+K+AP++ F KPIGS+S+SGHKF+GCP+P
Sbjct: 262 LVIKTLEECGFSHDRFYIHCDGALFGLMMPFVKRAPKVTFNKPIGSVSVSGHKFVGCPMP 321

Query: 295 CGVVITRTEHVNALARDVEYIESRDVTITGSRCGLASIFLWYALQERGLIGLKREAQMCI 354
           CGV ITR EH+  L+ +VEY+ SRD TI GSR G A +FLWY L  +G  G ++E Q C+
Sbjct: 322 CGVQITRMEHIKVLSSNVEYLASRDATIMGSRNGHAPLFLWYTLNRKGYKGFQKEVQKCL 381

Query: 355 TKACHLLDKLHDNDIGAMRNEFSNTVVFERPPDDDFVRKWNLSCEGNVAHVVVMQHVTIE 414
             A +L D+L +  I AM NE S+TVVFERP D++FVR+W L+C+G++AHVVVM  VTIE
Sbjct: 382 RNAHYLKDRLREAGISAMLNELSSTVVFERPKDEEFVRRWQLACQGDIAHVVVMPSVTIE 441

Query: 415 MLDSFVSELVTKRSFWFQGGQRKPPCIADNVGGKNCACTLH 455
            LD+F+ +LV  R  W++ G  +PPC+A  VG  NC C  H
Sbjct: 442 KLDNFLKDLVKHRLIWYEDGS-QPPCLASEVGTNNCICPAH 481