Miyakogusa Predicted Gene

Lj3g3v0075810.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0075810.1 Non Chatacterized Hit- tr|D8U5T3|D8U5T3_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,33.51,0.000000000000003,SUBFAMILY NOT NAMED,NULL;
CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE,NULL; no
descrip,CUFF.40274.1
         (267 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G15690.2 | Symbols:  | Single hybrid motif superfamily protei...   242   2e-64
AT1G52670.1 | Symbols:  | Single hybrid motif superfamily protei...   223   9e-59
AT3G15690.1 | Symbols:  | Single hybrid motif superfamily protei...   200   1e-51
AT3G56130.1 | Symbols:  | biotin/lipoyl attachment domain-contai...   131   4e-31
AT3G56130.2 | Symbols:  | biotin/lipoyl attachment domain-contai...   125   3e-29
AT3G56130.4 | Symbols:  | biotin/lipoyl attachment domain-contai...   124   6e-29
AT3G56130.3 | Symbols:  | biotin/lipoyl attachment domain-contai...   117   8e-27
AT5G15530.1 | Symbols: BCCP2, CAC1-B | biotin carboxyl carrier p...    63   2e-10
AT5G16390.1 | Symbols: CAC1, CAC1A, BCCP, BCCP1 | chloroplastic ...    54   1e-07

>AT3G15690.2 | Symbols:  | Single hybrid motif superfamily protein |
           chr3:5317108-5319435 FORWARD LENGTH=263
          Length = 263

 Score =  242 bits (617), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 139/278 (50%), Positives = 183/278 (65%), Gaps = 26/278 (9%)

Query: 1   MASCN-------VKALNLCFGGKRV---SLSQQFGTRNWIIRKSVQYTSLDMSQHRVGFL 50
           MASC+       + A++L     RV   SL   +  R+ + ++ V+Y SL  +   V  +
Sbjct: 1   MASCSLGVPKIKISAVDL----SRVRSGSLLIPYNQRSLLRQRPVKYLSLKTTFGSVKAV 56

Query: 51  KSSNGPLSQIQPVTSSENGSKEIESSGLTSTLIPKLNEVEFLLTKLCETS-IGELELKLA 109
           + S  P ++    T     SKEI+SS L + L+PK +EVE L+T++C++S I E ELKL 
Sbjct: 57  QVSTVPTAETS-ATIEVKDSKEIKSSRLNAQLVPKPSEVEALVTEICDSSSIAEFELKLG 115

Query: 110 GFHLHVLRDSTEKVKTLPRQTPASVNINVVPEAPKSNGPVASSSLAILKPEPSSGSVQRF 169
           GF L+V R+  +     P  TPA    N   E+P+SNG  +S+SLAI KP  S       
Sbjct: 116 GFRLYVARNIADNSSLQPPPTPAVTASNATTESPESNGSASSTSLAISKPASS------- 168

Query: 170 LDKAADEGFVIIYSPKVGFFRRSRTIKGKRAPPSCKETQKVQEGQVICYIEQLGGQLPIE 229
              AAD+G +I+ SPKVGFFRRS+TIKGKR P SCKE  +V+EGQ++CYIEQLGGQ PIE
Sbjct: 169 ---AADQGLMILQSPKVGFFRRSKTIKGKRLPSSCKEKDQVKEGQILCYIEQLGGQFPIE 225

Query: 230 SDVSGEVIRILREDGDPVGYGDALIAILPSFPGIKKLQ 267
           SDV+GEV++ILREDG+PVGY DALI+ILPSFPGIKKLQ
Sbjct: 226 SDVTGEVVKILREDGEPVGYNDALISILPSFPGIKKLQ 263


>AT1G52670.1 | Symbols:  | Single hybrid motif superfamily protein |
           chr1:19615119-19617420 REVERSE LENGTH=274
          Length = 274

 Score =  223 bits (569), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 119/243 (48%), Positives = 165/243 (67%), Gaps = 3/243 (1%)

Query: 27  RNWIIRKSVQYTSLDMSQHRVGFLKSSNGPLSQIQPVTSSENGSKEIESSGLTSTLIPKL 86
           R ++ +  ++Y SL  +   V  ++ S  P ++ + +   ++ S E +S+ + + L+PK 
Sbjct: 33  RLFVDQSPMKYLSLRTTLRSVKAIQLSTVPPAETEAIADVKD-SDETKSTVVNTHLMPKS 91

Query: 87  NEVEFLLTKLCETS-IGELELKLAGFHLHVLRDSTEKVKTLPRQTPASVNINVVPEAPKS 145
           +EVE L++++ ++S I E ELKL GF L+V R  T++    P+Q    V  +  PE   +
Sbjct: 92  SEVEALISEITDSSSIAEFELKLGGFRLYVARKLTDESSPPPQQIQPVVAASATPEGVHT 151

Query: 146 NGPVASSSLAILKPEPSSGSV-QRFLDKAADEGFVIIYSPKVGFFRRSRTIKGKRAPPSC 204
           NG   SSSLAI K   SS    Q   +KAAD+G VI+ SP VG+FRRS+TIKGKR P  C
Sbjct: 152 NGSATSSSLAITKTSSSSADRPQTLANKAADQGLVILQSPTVGYFRRSKTIKGKRTPTIC 211

Query: 205 KETQKVQEGQVICYIEQLGGQLPIESDVSGEVIRILREDGDPVGYGDALIAILPSFPGIK 264
           KE   V+EGQV+CYIEQLGGQ+P+ESDVSGE+++ILREDG+PVGY DALI +LPSFPGIK
Sbjct: 212 KEKDIVKEGQVLCYIEQLGGQIPVESDVSGEIVKILREDGEPVGYNDALITVLPSFPGIK 271

Query: 265 KLQ 267
           KLQ
Sbjct: 272 KLQ 274


>AT3G15690.1 | Symbols:  | Single hybrid motif superfamily protein |
           chr3:5317108-5319383 FORWARD LENGTH=247
          Length = 247

 Score =  200 bits (508), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 109/222 (49%), Positives = 147/222 (66%), Gaps = 12/222 (5%)

Query: 24  FGTRNWIIRKSVQYTSLDMSQHRVGFLKSSNGPLSQIQPVTSSENGSKEIESSGLTSTLI 83
           +  R+ + ++ V+Y SL  +   V  ++ S  P ++    T     SKEI+SS L + L+
Sbjct: 30  YNQRSLLRQRPVKYLSLKTTFGSVKAVQVSTVPTAETS-ATIEVKDSKEIKSSRLNAQLV 88

Query: 84  PKLNEVEFLLTKLCETS-IGELELKLAGFHLHVLRDSTEKVKTLPRQTPASVNINVVPEA 142
           PK +EVE L+T++C++S I E ELKL GF L+V R+  +     P  TPA    N   E+
Sbjct: 89  PKPSEVEALVTEICDSSSIAEFELKLGGFRLYVARNIADNSSLQPPPTPAVTASNATTES 148

Query: 143 PKSNGPVASSSLAILKPEPSSGSVQRFLDKAADEGFVIIYSPKVGFFRRSRTIKGKRAPP 202
           P+SNG  +S+SLAI KP  S          AAD+G +I+ SPKVGFFRRS+TIKGKR P 
Sbjct: 149 PESNGSASSTSLAISKPASS----------AADQGLMILQSPKVGFFRRSKTIKGKRLPS 198

Query: 203 SCKETQKVQEGQVICYIEQLGGQLPIESDVSGEVIRILREDG 244
           SCKE  +V+EGQ++CYIEQLGGQ PIESDV+GEV++ILREDG
Sbjct: 199 SCKEKDQVKEGQILCYIEQLGGQFPIESDVTGEVVKILREDG 240


>AT3G56130.1 | Symbols:  | biotin/lipoyl attachment
           domain-containing protein | chr3:20826852-20829007
           FORWARD LENGTH=281
          Length = 281

 Score =  131 bits (330), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 77/191 (40%), Positives = 114/191 (59%), Gaps = 18/191 (9%)

Query: 88  EVEFLLTKLC-ETSIGELELKLAGFHLHVLRDSTEKVKTLPRQTPASVNINVVPEAP-KS 145
           EVE L+ ++C ET +  L+LK+  F +++ R        +P    A ++  V P  P + 
Sbjct: 91  EVEALVHEMCDETEVAVLQLKVGDFEMNLKRKIGAATNPIPV---ADISPTVAPPIPSEP 147

Query: 146 NGPVASSSLAILKPEPSSGSVQRF-------------LDKAADEGFVIIYSPKVGFFRRS 192
               ASS+ +  + +PSS  V  F             L+ +    +V++ SP VG F+RS
Sbjct: 148 MNKSASSAPSPSQAKPSSEKVSPFKNTSYGKPAKLAALEASGSTNYVLVTSPAVGKFQRS 207

Query: 193 RTIKGKRAPPSCKETQKVQEGQVICYIEQLGGQLPIESDVSGEVIRILREDGDPVGYGDA 252
           RT+KGK+  PSCKE   ++EGQVI Y+ QLG +LP+ SDV+GEV+++L +DGD VGYGD 
Sbjct: 208 RTVKGKKQSPSCKEGDAIKEGQVIGYLHQLGTELPVTSDVAGEVLKLLSDDGDSVGYGDP 267

Query: 253 LIAILPSFPGI 263
           L+A+LPSF  I
Sbjct: 268 LVAVLPSFHDI 278


>AT3G56130.2 | Symbols:  | biotin/lipoyl attachment
           domain-containing protein | chr3:20827850-20829007
           FORWARD LENGTH=205
          Length = 205

 Score =  125 bits (314), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 113/190 (59%), Gaps = 18/190 (9%)

Query: 89  VEFLLTKLC-ETSIGELELKLAGFHLHVLRDSTEKVKTLPRQTPASVNINVVPEAP-KSN 146
           ++ L+ ++C ET +  L+LK+  F +++ R        +P    A ++  V P  P +  
Sbjct: 16  LQALVHEMCDETEVAVLQLKVGDFEMNLKRKIGAATNPIPV---ADISPTVAPPIPSEPM 72

Query: 147 GPVASSSLAILKPEPSSGSVQRF-------------LDKAADEGFVIIYSPKVGFFRRSR 193
              ASS+ +  + +PSS  V  F             L+ +    +V++ SP VG F+RSR
Sbjct: 73  NKSASSAPSPSQAKPSSEKVSPFKNTSYGKPAKLAALEASGSTNYVLVTSPAVGKFQRSR 132

Query: 194 TIKGKRAPPSCKETQKVQEGQVICYIEQLGGQLPIESDVSGEVIRILREDGDPVGYGDAL 253
           T+KGK+  PSCKE   ++EGQVI Y+ QLG +LP+ SDV+GEV+++L +DGD VGYGD L
Sbjct: 133 TVKGKKQSPSCKEGDAIKEGQVIGYLHQLGTELPVTSDVAGEVLKLLSDDGDSVGYGDPL 192

Query: 254 IAILPSFPGI 263
           +A+LPSF  I
Sbjct: 193 VAVLPSFHDI 202


>AT3G56130.4 | Symbols:  | biotin/lipoyl attachment
           domain-containing protein | chr3:20826852-20829007
           FORWARD LENGTH=274
          Length = 274

 Score =  124 bits (312), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 110/192 (57%), Gaps = 27/192 (14%)

Query: 88  EVEFLLTKLC-ETSIGELELKLAGFHLHVLRDSTEKVKTLPRQTP-ASVNINVVPEAP-K 144
           EVE L+ ++C ET +G+ E+ L             K+       P A ++  V P  P +
Sbjct: 91  EVEALVHEMCDETEVGDFEMNL-----------KRKIGAATNPIPVADISPTVAPPIPSE 139

Query: 145 SNGPVASSSLAILKPEPSSGSVQRF-------------LDKAADEGFVIIYSPKVGFFRR 191
                ASS+ +  + +PSS  V  F             L+ +    +V++ SP VG F+R
Sbjct: 140 PMNKSASSAPSPSQAKPSSEKVSPFKNTSYGKPAKLAALEASGSTNYVLVTSPAVGKFQR 199

Query: 192 SRTIKGKRAPPSCKETQKVQEGQVICYIEQLGGQLPIESDVSGEVIRILREDGDPVGYGD 251
           SRT+KGK+  PSCKE   ++EGQVI Y+ QLG +LP+ SDV+GEV+++L +DGD VGYGD
Sbjct: 200 SRTVKGKKQSPSCKEGDAIKEGQVIGYLHQLGTELPVTSDVAGEVLKLLSDDGDSVGYGD 259

Query: 252 ALIAILPSFPGI 263
            L+A+LPSF  I
Sbjct: 260 PLVAVLPSFHDI 271


>AT3G56130.3 | Symbols:  | biotin/lipoyl attachment
           domain-containing protein | chr3:20827887-20829007
           FORWARD LENGTH=194
          Length = 194

 Score =  117 bits (293), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 52/94 (55%), Positives = 72/94 (76%)

Query: 170 LDKAADEGFVIIYSPKVGFFRRSRTIKGKRAPPSCKETQKVQEGQVICYIEQLGGQLPIE 229
           L+ +    +V++ SP VG F+RSRT+KGK+  PSCKE   ++EGQVI Y+ QLG +LP+ 
Sbjct: 98  LEASGSTNYVLVTSPAVGKFQRSRTVKGKKQSPSCKEGDAIKEGQVIGYLHQLGTELPVT 157

Query: 230 SDVSGEVIRILREDGDPVGYGDALIAILPSFPGI 263
           SDV+GEV+++L +DGD VGYGD L+A+LPSF  I
Sbjct: 158 SDVAGEVLKLLSDDGDSVGYGDPLVAVLPSFHDI 191


>AT5G15530.1 | Symbols: BCCP2, CAC1-B | biotin carboxyl carrier
           protein 2 | chr5:5038955-5040437 FORWARD LENGTH=255
          Length = 255

 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 115/273 (42%), Gaps = 33/273 (12%)

Query: 1   MASCNVKALNLCFGGKRVSLSQQFGTRNWIIRKSVQYTSLDMSQHRVGFLK---SSNGPL 57
           MAS +V  + +C   +RV       T+ W  + +      D+SQ+   F +   ++N  +
Sbjct: 1   MASLSVPCVKICALNRRVGSLPGISTQRWQPQPNGISFPSDVSQNHSAFWRLRATTNEVV 60

Query: 58  SQIQPVTSSENGSKEIESSGLTSTLIPKLNEV-EFL-----LTKLCET-SIGELELKLAG 110
           S   P+T   NG      +G   T +P+  E+ EF+     L KL ++  I ELELK   
Sbjct: 61  SNSTPMT---NGGY---MNGKAKTNVPEPAELSEFMAKVSGLLKLVDSKDIVELELKQLD 114

Query: 111 FHL-----HVLRDSTEKVKTLPRQTPASVNINVVPEAPKSNGPVASSSLAILKPEPSSGS 165
             +       L+ +           P   + ++ P  P +  P  + +      +P+S  
Sbjct: 115 CEIVIRKKEALQQAVPPAPVYHSMPPVMADFSMPPAQPVALPPSPTPTSTPATAKPTS-- 172

Query: 166 VQRFLDKAADEGFVIIYSPKVGFFRRSRTIKGKRAPPSCKETQKVQEGQVICYIEQLGGQ 225
                  A       + SP  G F RS    G   PP  K   KVQ+GQ++C IE +   
Sbjct: 173 -------APSSSHPPLKSPMAGTFYRS---PGPGEPPFVKVGDKVQKGQIVCIIEAMKLM 222

Query: 226 LPIESDVSGEVIRILREDGDPVGYGDALIAILP 258
             IE++ SG ++ +L EDG PV     L  I P
Sbjct: 223 NEIEAEKSGTIMELLAEDGKPVSVDTPLFVIAP 255


>AT5G16390.1 | Symbols: CAC1, CAC1A, BCCP, BCCP1 | chloroplastic
           acetylcoenzyme A carboxylase 1 | chr5:5361098-5363020
           REVERSE LENGTH=280
          Length = 280

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 3/78 (3%)

Query: 181 IYSPKVGFFRRSRTIKGKRAPPSCKETQKVQEGQVICYIEQLGGQLPIESDVSGEVIRIL 240
           + SP  G F RS        PP  K   KVQ+GQV+C +E +     IESD +G V+ I+
Sbjct: 206 VKSPMAGTFYRS---PAPGEPPFIKVGDKVQKGQVLCIVEAMKLMNEIESDHTGTVVDIV 262

Query: 241 REDGDPVGYGDALIAILP 258
            EDG PV     L  + P
Sbjct: 263 AEDGKPVSLDTPLFVVQP 280