Miyakogusa Predicted Gene

Lj3g3v0075720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0075720.1 tr|Q2HVW5|Q2HVW5_MEDTR Nucleoporin interacting
component; Protein prenyltransferase OS=Medicago
trun,91.73,0,SUBFAMILY NOT NAMED,NULL; NUCLEAR PORE COMPLEX PROTEIN
NUP93 (NUCLEOPORIN NUP93) (DEAD EYE PROTEIN),,CUFF.40306.1
         (855 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G41620.1 | Symbols:  | Nucleoporin interacting component (Nup...  1192   0.0  
AT3G57350.1 | Symbols:  | Nucleoporin interacting component (Nup...  1158   0.0  

>AT2G41620.1 | Symbols:  | Nucleoporin interacting component
           (Nup93/Nic96-like) family protein |
           chr2:17350419-17354997 REVERSE LENGTH=861
          Length = 861

 Score = 1192 bits (3085), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 582/860 (67%), Positives = 673/860 (78%), Gaps = 8/860 (0%)

Query: 1   MAN-EDLASWSDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKSKTVRAEAPSQS 59
           MAN ++++ W+DLLHSS+KLLEQAAPS+QFPPLQRNLDQLEALSKKLK+KT+R EAPSQS
Sbjct: 1   MANDQEMSGWTDLLHSSSKLLEQAAPSSQFPPLQRNLDQLEALSKKLKAKTLRNEAPSQS 60

Query: 60  IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPVEATSVEEYLQQVHEMAMVSAVQEA 119
           IAATRLLAREGINAEQLARDLKSFELKTTFEDVFP EATSVEEYLQQVHEMAMVSA+QEA
Sbjct: 61  IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPAEATSVEEYLQQVHEMAMVSAIQEA 120

Query: 120 QKDNLRSFNDYMMKVLEEDWHKEKRDFLQSLNRISTLPRTNMVTNSNGGTRQGQIVSVAS 179
           QKDN+RSFNDYMMKVLEEDW KEKRDFLQSL+RIS LP+TNM+  S      GQ+V V S
Sbjct: 121 QKDNVRSFNDYMMKVLEEDWRKEKRDFLQSLSRISMLPKTNMIDTSREA-HAGQLVPVGS 179

Query: 180 N-----VPSMEVVPFTTRPIAEKKASVYAEVVKNLNRARQSGLPFKPAAAFKGAYESLNI 234
           +      P  E+V     PI EKKA VY EVVK LN +R+ G+PF+PA  FK AY++L  
Sbjct: 180 SPRVSSTPGKELVALANIPIHEKKAYVYGEVVKKLNTSRERGMPFRPAMCFKDAYDTLGA 239

Query: 235 DASGGKSVTMRKIWHLVQMLMDTDSPL-QHVSEKMLLIIGARRHLEWGHEKYIMDTIQSH 293
           + + GKSV M+KIW LVQ +   DS + Q VS++M L IGAR HL+ GHEK+IMDTIQ+H
Sbjct: 240 EVTRGKSVNMQKIWQLVQAITGEDSAVRQGVSKRMALAIGARHHLQHGHEKFIMDTIQTH 299

Query: 294 PAQAALGGGVGNLQRIRAFLRIRLRDYGALDFDAGDARRQPPVDTTWQQIYFCLRSGYYD 353
           P QAALGG VGNLQRIRAFLRIRLRDYG LDFD+ DARRQPPVDTTWQQIYFCLR+GYY+
Sbjct: 300 PTQAALGGSVGNLQRIRAFLRIRLRDYGVLDFDSTDARRQPPVDTTWQQIYFCLRTGYYE 359

Query: 354 EARNVALSSRASHQFAPLLTEWINTGGMVXXXXXXXXXXXXXRMLRTGDRVGRAGYDKKK 413
           EAR +A S+R+S QFAPLLTEWI T GMV             +MLR GDR+GR  YDKKK
Sbjct: 360 EAREIARSTRSSQQFAPLLTEWITTDGMVAAESAAIASEECEKMLRMGDRLGRTAYDKKK 419

Query: 414 LLLFAIISGSRRHIDRLLRDQPTLFSTIEDFLWFKLSAVRDCPGGSSSIVLSDGLIPYSL 473
           LLL+ IISGSRR I+R+LRD  TLF+TIEDFLWFKLS +RD  GGSSS+VL+DGL PYSL
Sbjct: 420 LLLYTIISGSRRQIERILRDLSTLFNTIEDFLWFKLSCIRDVTGGSSSVVLNDGLAPYSL 479

Query: 474 DDLQIYLNKFEPSYYTKNGKDPLVYPYILLLSIQLLPAVLHLSKETGDEGYNIDAAHLSI 533
           DDLQ YLNKFEPSYYTKNGKDPLVYPY+LLLS+QLLPA++HLSKE GD GYNIDA H++I
Sbjct: 480 DDLQAYLNKFEPSYYTKNGKDPLVYPYVLLLSVQLLPAIMHLSKEAGDGGYNIDAVHIAI 539

Query: 534 VLADHGVLSEGAGAGQKLGVMDAYAEVSTIIRQYGSMYLRLGDXXXXXXXXXXXXXXXXX 593
            L DH VLSEG+G G KL VMD+ AE S++IRQYGSM+L  GD                 
Sbjct: 540 SLVDHSVLSEGSGTGHKLSVMDSNAEASSMIRQYGSMFLHHGDLQMTVEYYAQAAATVGG 599

Query: 594 XXXSWTGRGNVDQQRQRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVTDFKAR 653
              +W+GR NVDQQRQRN                                  F  D + R
Sbjct: 600 GQLAWSGRSNVDQQRQRNLMLKQLLTEILLRERGIYFLLGARGSGEEGQLGRFFPDSRLR 659

Query: 654 KQFLYEAACQCQEAGMYDKSIEIQKRVGSFSMALDTINKCLSEAICALFRGRLDGESQTA 713
           +QFL EAA QCQEAG+YDKSIE+QKRVG+FS AL+TINKCLSEAIC+L RGRLDGES+T+
Sbjct: 660 QQFLVEAAHQCQEAGLYDKSIELQKRVGAFSAALETINKCLSEAICSLARGRLDGESRTS 719

Query: 714 GLIHSGNEILEAYPYYPDVSPQERIDVFEQQAVLRELESILSIHKLSRLGHHVDALREVA 773
           GLI +GN+ILE Y YYP+VS QER  V EQ+ +LRELE+ILSIHKL RLG+H+DALRE+A
Sbjct: 720 GLILAGNDILETYKYYPEVSLQERERVMEQETILRELEAILSIHKLGRLGNHLDALREIA 779

Query: 774 KLPFLPLDPRGPDVAIDVFENLSPHVQACIPDLLKVALTCLDYVTDSDGSLRALRAKIAS 833
           KLPFL LDPR PD   DVF++ SP+ Q C+PDLLKVALTCLD V D+DGS+RA+R+KIA 
Sbjct: 780 KLPFLHLDPRMPDATADVFQSASPYFQTCVPDLLKVALTCLDNVPDTDGSIRAMRSKIAG 839

Query: 834 FIANNLKRNWPRDLYERVAQ 853
           F+A+N  RNWPRDLYE+VA+
Sbjct: 840 FLASNTHRNWPRDLYEKVAR 859


>AT3G57350.1 | Symbols:  | Nucleoporin interacting component
           (Nup93/Nic96-like) family protein |
           chr3:21220606-21225305 REVERSE LENGTH=860
          Length = 860

 Score = 1158 bits (2996), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 572/859 (66%), Positives = 672/859 (78%), Gaps = 7/859 (0%)

Query: 1   MAN-EDLASWSDLLHSSTKLLEQAAPSAQFPPLQRNLDQLEALSKKLKSKTVRAEAPSQS 59
           MAN ++++ W+DLLHSSTKLLEQAAPS+QFPPLQRNLDQLEALS+KLK+KT+R EAPSQS
Sbjct: 1   MANDQEMSGWTDLLHSSTKLLEQAAPSSQFPPLQRNLDQLEALSRKLKAKTLRNEAPSQS 60

Query: 60  IAATRLLAREGINAEQLARDLKSFELKTTFEDVFPVEATSVEEYLQQVHEMAMVSAVQEA 119
           IAATRLLAREGINA+QL+RDLKSFELKTTFEDVFP E TSVEEYLQQVHEMAMVSA+QEA
Sbjct: 61  IAATRLLAREGINADQLSRDLKSFELKTTFEDVFPAETTSVEEYLQQVHEMAMVSAIQEA 120

Query: 120 QKDNLRSFNDYMMKVLEEDWHKEKRDFLQSLNRISTLPRTNMVTNSNGGTRQGQIVSVAS 179
           QKDN+RSFN+YM+KVLEED  KEKRDFL SL++ S LP+T M+ NS+ G+  G +V ++ 
Sbjct: 121 QKDNVRSFNNYMLKVLEEDCIKEKRDFLHSLSKTSMLPKTKMI-NSSRGSHAGSLVPLSP 179

Query: 180 NV---PSMEVVPFTTRPIAEKKASVYAEVVKNLNRARQSGLPFKPAAAFKGAYESLNIDA 236
            V   P  E+V  T +PI EKKA VYAEVVK LN AR+ GLPFK A  F GAYESL ID 
Sbjct: 180 QVSSKPGTELVSMTNKPIHEKKAYVYAEVVKKLNSARERGLPFKLATLFNGAYESLEIDL 239

Query: 237 SGGKSVTMRKIWHLVQMLMDTDSPLQH-VSEKMLLIIGARRHLEWGHEKYIMDTIQSHPA 295
           + GKSV M+K+W L+Q +   +S +QH VS++M L+IGARRHLE GH K+IMDTIQSHP 
Sbjct: 240 TRGKSVNMQKLWQLIQGMTGEESAVQHGVSKRMALVIGARRHLECGHGKHIMDTIQSHPT 299

Query: 296 QAALGGGVGNLQRIRAFLRIRLRDYGALDFDAGDARRQPPVDTTWQQIYFCLRSGYYDEA 355
           QAALGG VGNLQRIRAFLRIRLRDYG+LDFD+ DARRQPPVDTTWQQIYFCLR+GYY+EA
Sbjct: 300 QAALGGSVGNLQRIRAFLRIRLRDYGSLDFDSVDARRQPPVDTTWQQIYFCLRTGYYEEA 359

Query: 356 RNVALSSRASHQ-FAPLLTEWINTGGMVXXXXXXXXXXXXXRMLRTGDRVGRAGYDKKKL 414
           R +A SSR+S Q FAPLLTEWI TGG V             ++LR GDR G+  YDKKKL
Sbjct: 360 REIAQSSRSSQQQFAPLLTEWITTGGTVAAQTAATASEECEKLLRMGDRFGQTTYDKKKL 419

Query: 415 LLFAIISGSRRHIDRLLRDQPTLFSTIEDFLWFKLSAVRDCPGGSSSIVLSDGLIPYSLD 474
           LL+ IISGSRR IDR++RD  TLF+TIEDFLWFKLS VRD  GGSSS++++DGL+PYSLD
Sbjct: 420 LLYTIISGSRRQIDRIMRDFSTLFNTIEDFLWFKLSCVRDVAGGSSSMIVNDGLVPYSLD 479

Query: 475 DLQIYLNKFEPSYYTKNGKDPLVYPYILLLSIQLLPAVLHLSKETGDEGYNIDAAHLSIV 534
           DLQ YLNKFEPSYYTKNGKDPLVYPY+LLLSIQLLPA++H+S E GDEGYNIDA H++I 
Sbjct: 480 DLQAYLNKFEPSYYTKNGKDPLVYPYVLLLSIQLLPAIMHMSNEAGDEGYNIDAVHVAIS 539

Query: 535 LADHGVLSEGAGAGQKLGVMDAYAEVSTIIRQYGSMYLRLGDXXXXXXXXXXXXXXXXXX 594
           L DH +LSEG+G G+KL VMDA AE S++IRQYGSMYL  GD                  
Sbjct: 540 LVDHSILSEGSGTGRKLSVMDANAEASSMIRQYGSMYLHHGDLQMTLEYYAQAAIAVGGG 599

Query: 595 XXSWTGRGNVDQQRQRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVTDFKARK 654
             +W+GR NVDQQRQRN                                  F+ D K R+
Sbjct: 600 QQAWSGRSNVDQQRQRNLMLKQLLTEILSQEDGIHFLLGARGSGEEGELGRFLPDIKLRQ 659

Query: 655 QFLYEAACQCQEAGMYDKSIEIQKRVGSFSMALDTINKCLSEAICALFRGRLDGESQTAG 714
           QFL EAA Q QEAG+YDKSIE+QKRVG+FS AL+TINKCLSEAIC+L RGR DGES+T G
Sbjct: 660 QFLIEAAHQFQEAGLYDKSIELQKRVGAFSSALETINKCLSEAICSLVRGRPDGESRTEG 719

Query: 715 LIHSGNEILEAYPYYPDVSPQERIDVFEQQAVLRELESILSIHKLSRLGHHVDALREVAK 774
           L+ SGN+IL +Y Y+PDVS QER  V EQ+ +LRELE+ILSIHKL+RL  H+DA+REVAK
Sbjct: 720 LVLSGNDILNSYKYHPDVSAQERHLVMEQETILRELEAILSIHKLARLNKHLDAIREVAK 779

Query: 775 LPFLPLDPRGPDVAIDVFENLSPHVQACIPDLLKVALTCLDYVTDSDGSLRALRAKIASF 834
           LPFL LDPR PD   D F+  S + Q C+PDLLKVALTCLD V D+DGS+R +R+KIA F
Sbjct: 780 LPFLHLDPRQPDTTSDEFQKASSYFQTCVPDLLKVALTCLDNVADTDGSIRGMRSKIAGF 839

Query: 835 IANNLKRNWPRDLYERVAQ 853
           +A+N +RNWPRDLYE++A+
Sbjct: 840 LASNTQRNWPRDLYEKIAR 858