Miyakogusa Predicted Gene

Lj3g3v0030640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0030640.1 Non Chatacterized Hit- tr|I1MCC8|I1MCC8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.33259
PE,69.23,0.0000000000006,BRAP2,BRCA1-associated 2; zf-UBP,Zinc finger,
UBP-type; zf-RING_2,Zinc finger, RING-type; RING/U-box,CUFF.40217.1
         (467 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G26000.2 | Symbols: BRIZ2 | zinc finger (C3HC4-type RING fing...   580   e-166
AT2G26000.1 | Symbols: BRIZ2 | zinc finger (C3HC4-type RING fing...   544   e-155
AT2G42160.1 | Symbols: BRIZ1 | zinc finger (ubiquitin-hydrolase)...   390   e-109
AT1G72220.1 | Symbols:  | RING/U-box superfamily protein | chr1:...    51   2e-06
AT5G65683.1 | Symbols:  | Zinc finger (C3HC4-type RING finger) f...    49   8e-06

>AT2G26000.2 | Symbols: BRIZ2 | zinc finger (C3HC4-type RING finger)
           family protein | chr2:11082403-11085137 FORWARD
           LENGTH=479
          Length = 479

 Score =  580 bits (1496), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 270/427 (63%), Positives = 334/427 (78%), Gaps = 6/427 (1%)

Query: 31  GNPRIEETRGLMHLIXXXX---XXXXXXXSLPVDRKPLVCVVGVPNHMTYADFCQFCGSF 87
           GNPRI ETRG+MHLI              +LP+ R PLVCV+GVPNHMTYADFCQFCGSF
Sbjct: 24  GNPRIGETRGVMHLISDNAVSSSSSSSSSNLPIGRNPLVCVLGVPNHMTYADFCQFCGSF 83

Query: 88  IHHILEMRIVRMDGMEDHYSVLIRFDEQQYADTFYTHYNGRRFSSLEVEECRVLFTLDVQ 147
           I HIL+MR VR D +E+ YS+LIRFD Q+  DTF+ H+ G++F+SL+ + CR+LF LDVQ
Sbjct: 84  IQHILDMRTVRNDDIENRYSILIRFDSQESTDTFFQHFRGKQFNSLDEDVCRLLFALDVQ 143

Query: 148 ---YTGSIEHAQPSSASSTEQPTCPVCLERLDQDTSGILTTICNHSFHCSCISKWADSSC 204
              Y+GSI+H QPS+A   EQPTCPVCLERLDQDT GILTT+CNHSFHCSCIS W DSSC
Sbjct: 144 FTGYSGSIDHTQPSAAGPIEQPTCPVCLERLDQDTGGILTTMCNHSFHCSCISNWPDSSC 203

Query: 205 PVCRYCQQQAEKSICFVCQTTENLWICVICGFVGCGRYKGGHAIIHWKETQHCYSLEVET 264
           PVCRYCQQQ E S+C VCQTTENLW+CVICG VGCGRYK GHA  HW+ET+HCYSLE+ET
Sbjct: 204 PVCRYCQQQPENSVCCVCQTTENLWMCVICGVVGCGRYKEGHARRHWEETEHCYSLELET 263

Query: 265 KRVWDYAGDNYVHRLILSKTDGKLVELNSHCAHADXXXXXXXXEDSAVSEAIHNSKVEAI 324
           +RVWDYAGDNYVHRLI SKTDGKLVELNSH + +          DS +++A+ NSKV+ I
Sbjct: 264 QRVWDYAGDNYVHRLIQSKTDGKLVELNSHGSLSKDGCGSCEYSDSGMTDALLNSKVDMI 323

Query: 325 VNEYNELLASQLENQKLYFESLLQEVKEETERKISQGVQKAVSLKQQKIQAKIDRFNKEK 384
           ++EYNELL +QLENQK YFE LLQ VKEETE+KIS+   KA+S + QK+Q + DR  KEK
Sbjct: 324 ISEYNELLQAQLENQKQYFEKLLQNVKEETEQKISEAASKAISQRLQKLQTRFDRCVKEK 383

Query: 385 KFLEEINENLVKNGEIWKAKLLEIEEREKKTLKLNNDRLTGLEKQLSDLMICLEGGKTVP 444
           +FLE++NENLVKN ++W  K+ E++EREKK ++  ++++ GLE+QL +LM  ++G   V 
Sbjct: 384 QFLEDLNENLVKNKDVWSTKITEMKEREKKAVRAKDEKIQGLEEQLGNLMAQMDGESEVS 443

Query: 445 VSNEIKD 451
            + E++D
Sbjct: 444 ETKEVQD 450


>AT2G26000.1 | Symbols: BRIZ2 | zinc finger (C3HC4-type RING finger)
           family protein | chr2:11082403-11085137 FORWARD
           LENGTH=461
          Length = 461

 Score =  544 bits (1401), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 257/427 (60%), Positives = 319/427 (74%), Gaps = 24/427 (5%)

Query: 31  GNPRIEETRGLMHLIXXXX---XXXXXXXSLPVDRKPLVCVVGVPNHMTYADFCQFCGSF 87
           GNPRI ETRG+MHLI              +LP+ R PLVCV+GVPNHMTYADFCQFCGSF
Sbjct: 24  GNPRIGETRGVMHLISDNAVSSSSSSSSSNLPIGRNPLVCVLGVPNHMTYADFCQFCGSF 83

Query: 88  IHHILEMRIVRMDGMEDHYSVLIRFDEQQYADTFYTHYNGRRFSSLEVEECRVLFTLDVQ 147
           I HIL+MR VR D +E+ YS+LIRFD Q+  DTF+ H+ G++F+SL+ + CR+LF LDVQ
Sbjct: 84  IQHILDMRTVRNDDIENRYSILIRFDSQESTDTFFQHFRGKQFNSLDEDVCRLLFALDVQ 143

Query: 148 ---YTGSIEHAQPSSASSTEQPTCPVCLERLDQDTSGILTTICNHSFHCSCISKWADSSC 204
              Y+GSI+H QPS+A   EQPTCPVCLERLDQDT GILTT+CNHSFHCSCIS W DSSC
Sbjct: 144 FTGYSGSIDHTQPSAAGPIEQPTCPVCLERLDQDTGGILTTMCNHSFHCSCISNWPDSSC 203

Query: 205 PVCRYCQQQAEKSICFVCQTTENLWICVICGFVGCGRYKGGHAIIHWKETQHCYSLEVET 264
           PVCRYCQQQ E S+C VCQTTENLW+CVICG VGCGRYK GHA  HW+ET+HCYSLE+ET
Sbjct: 204 PVCRYCQQQPENSVCCVCQTTENLWMCVICGVVGCGRYKEGHARRHWEETEHCYSLELET 263

Query: 265 KRVWDYAGDNYVHRLILSKTDGKLVELNSHCAHADXXXXXXXXEDSAVSEAIHNSKVEAI 324
           +RVWDYAGDNYVHRLI SKTDGKLVELNSH + +          DS +++A+ NSKV+  
Sbjct: 264 QRVWDYAGDNYVHRLIQSKTDGKLVELNSHGSLSKDGCGSCEYSDSGMTDALLNSKVD-- 321

Query: 325 VNEYNELLASQLENQKLYFESLLQEVKEETERKISQGVQKAVSLKQQKIQAKIDRFNKEK 384
                           +YFE LLQ VKEETE+KIS+   KA+S + QK+Q + DR  KEK
Sbjct: 322 ----------------MYFEKLLQNVKEETEQKISEAASKAISQRLQKLQTRFDRCVKEK 365

Query: 385 KFLEEINENLVKNGEIWKAKLLEIEEREKKTLKLNNDRLTGLEKQLSDLMICLEGGKTVP 444
           +FLE++NENLVKN ++W  K+ E++EREKK ++  ++++ GLE+QL +LM  ++G   V 
Sbjct: 366 QFLEDLNENLVKNKDVWSTKITEMKEREKKAVRAKDEKIQGLEEQLGNLMAQMDGESEVS 425

Query: 445 VSNEIKD 451
            + E++D
Sbjct: 426 ETKEVQD 432


>AT2G42160.1 | Symbols: BRIZ1 | zinc finger (ubiquitin-hydrolase)
           domain-containing protein | chr2:17574843-17577397
           REVERSE LENGTH=488
          Length = 488

 Score =  390 bits (1003), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 188/411 (45%), Positives = 269/411 (65%), Gaps = 4/411 (0%)

Query: 34  RIEETRGLMHLIXXXXXXXXXXXSLPVDRKPLVCVVGVPNHMTYADFCQFCGSFIHHILE 93
           ++ + +GL+HL              P  R   + +V VPN+++  DF +FC S I  + +
Sbjct: 43  KLTDRKGLIHLYRKSSHSSLPN---PSSRSTTLFIVAVPNYLSSLDFIRFCDSRISQVSD 99

Query: 94  MRIVRMDGMEDHYSVLIRFDEQQYADTFYTHYNGRRFSSLEVEECRVLFTLDVQYTGSIE 153
           +  +R DGMED YSVLI F +Q  AD FY + NG++F+  E E C +L+ + V++T   E
Sbjct: 100 ILFIRNDGMEDRYSVLITFSDQSEADGFYNNLNGKKFAPSEAEVCHILYVMSVEHTEFDE 159

Query: 154 HAQPSSASSTEQPTCPVCLERLDQDTSGILTTICNHSFHCSCISKWADSSCPVCRYCQQQ 213
            A  +    TE PTCP+CLERLD DTSGI++T+C+HSF CSC SKW   SC VCR CQQQ
Sbjct: 160 VAAEAPTGFTELPTCPICLERLDPDTSGIVSTLCDHSFQCSCTSKWTYLSCQVCRLCQQQ 219

Query: 214 AEKSICFVCQTTENLWICVICGFVGCGRYKGGHAIIHWKETQHCYSLEVETKRVWDYAGD 273
            E   C +C  TEN+W C++CGFVGCGRYK GH+I HWKET HCYSL++ T+++WDY GD
Sbjct: 220 DEILNCSICGKTENVWACLVCGFVGCGRYKEGHSIRHWKETHHCYSLDLRTQQIWDYVGD 279

Query: 274 NYVHRLILSKTDGKLVELNSHC-AHADXXXXXXXXEDSAVSEAIHNSKVEAIVNEYNELL 332
           +YVHRL  SK DGK VE+++ C +H          ED+ +S AI NSKV++IV EYN+LL
Sbjct: 280 SYVHRLNHSKIDGKSVEMSTSCLSHQGDCGLCECSEDTGISGAIFNSKVDSIVIEYNDLL 339

Query: 333 ASQLENQKLYFESLLQEVKEETERKISQGVQKAVSLKQQKIQAKIDRFNKEKKFLEEINE 392
           ASQL+ Q+ Y+ESL+ E + + E  I++ V++ V    Q++Q KI++  +EK  + E+N 
Sbjct: 340 ASQLKGQRQYYESLIVEARSKQESSIAEAVEQIVVNTMQELQNKIEKCEEEKSGITEVNT 399

Query: 393 NLVKNGEIWKAKLLEIEEREKKTLKLNNDRLTGLEKQLSDLMICLEGGKTV 443
            L+K  + W+ K  EIEERE   L   ++ +T L++Q+ D+ + +E  KT+
Sbjct: 400 KLIKEQDTWRKKAKEIEEREAALLGSKDEMITDLQEQIRDITVFIEAKKTL 450


>AT1G72220.1 | Symbols:  | RING/U-box superfamily protein |
           chr1:27184388-27185629 REVERSE LENGTH=413
          Length = 413

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 2/47 (4%)

Query: 164 EQPTCPVCLERLDQDTSGILTTICNHSFHCSCISKWADS--SCPVCR 208
           E+  CPVCL   ++D S  L   CNH+FH SCI  W  S  +CP+CR
Sbjct: 173 ERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCR 219


>AT5G65683.1 | Symbols:  | Zinc finger (C3HC4-type RING finger)
           family protein | chr5:26261472-26263704 FORWARD
           LENGTH=717
          Length = 717

 Score = 48.9 bits (115), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 4/54 (7%)

Query: 168 CPVCLERLDQD----TSGILTTICNHSFHCSCISKWADSSCPVCRYCQQQAEKS 217
           C +CL+R++ +    T+ I T  C+HSFH SC++   D  CP C      A KS
Sbjct: 140 CAICLQRVNSNQSNSTAAIFTAECSHSFHLSCVNGLEDKRCPFCSAAWNHAPKS 193