Miyakogusa Predicted Gene

Lj3g3v0014460.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0014460.1 Non Chatacterized Hit- tr|K4AS80|K4AS80_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,50,6e-19,seg,NULL; ZINC FINGER (C2H2 TYPE) FAMILY PROTEIN,NULL;
ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAIN,CUFF.40197.1
         (240 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G80730.1 | Symbols: ZFP1, ATZFP1 | zinc-finger protein 1 | ch...   116   1e-26
AT5G10970.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...   112   2e-25
AT5G25160.1 | Symbols: ZFP3 | zinc finger protein 3 | chr5:86875...   106   1e-23
AT1G66140.1 | Symbols: ZFP4 | zinc finger protein 4 | chr1:24620...    80   9e-16
AT1G24625.1 | Symbols: ZFP7 | zinc finger protein 7 | chr1:87260...    80   1e-15
AT5G57520.1 | Symbols: ZFP2, ATZFP2 | zinc finger protein 2 | ch...    76   2e-14
AT5G01860.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    64   7e-11
AT5G14010.1 | Symbols: KNU | C2H2 and C2HC zinc fingers superfam...    63   2e-10
AT3G58070.1 | Symbols: GIS | C2H2 and C2HC zinc fingers superfam...    60   2e-09
AT1G67030.1 | Symbols: ZFP6 | zinc finger protein 6 | chr1:25016...    58   5e-09
AT4G17810.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    58   7e-09
AT2G41940.1 | Symbols: ZFP8 | zinc finger protein 8 | chr2:17507...    58   7e-09
AT5G05120.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    57   1e-08
AT1G68360.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    52   4e-07
AT5G06650.1 | Symbols: GIS2 | C2H2 and C2HC zinc fingers superfa...    52   5e-07
AT5G48890.1 | Symbols:  | C2H2-like zinc finger protein | chr5:1...    51   6e-07
AT2G37740.1 | Symbols: ATZFP10, ZFP10 | zinc-finger protein 10 |...    51   8e-07
AT5G27880.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily...    51   8e-07
AT5G06070.1 | Symbols: RBE, RAB | C2H2 and C2HC zinc fingers sup...    50   2e-06
AT3G23130.1 | Symbols: SUP, FON1, FLO10 | C2H2 and C2HC zinc fin...    49   3e-06

>AT1G80730.1 | Symbols: ZFP1, ATZFP1 | zinc-finger protein 1 |
           chr1:30339493-30340179 REVERSE LENGTH=228
          Length = 228

 Score =  116 bits (291), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/135 (51%), Positives = 81/135 (60%), Gaps = 22/135 (16%)

Query: 51  LDLSLPSEYSGENSKPELNLINCFDTNLSTNSSESVVHGNEVEPRIFSCNYCQRQFYSSQ 110
           L+L L     G  +  ELNLI+ F T+ S+ S          +PR+FSCNYCQR+FYSSQ
Sbjct: 22  LELGLTLLSRGTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQ 81

Query: 111 ALGGHQNAHKRERTLAKRGHRV---------SSVDFGQ----RYSSMASLPLH------- 150
           ALGGHQNAHKRERTLAKRG            S+  FG     R++SMASLPLH       
Sbjct: 82  ALGGHQNAHKRERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRS 141

Query: 151 --GIQVHSMIHKPSY 163
             GIQ HS IHKPS+
Sbjct: 142 TLGIQAHSTIHKPSF 156


>AT5G10970.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr5:3469268-3470086 FORWARD LENGTH=272
          Length = 272

 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/236 (37%), Positives = 113/236 (47%), Gaps = 37/236 (15%)

Query: 35  EKEDQQHPHESAPRLLLDLSLPSEYSGENSKP----ELNLINCFDTNLSTNSSESVVHGN 90
           ++ED     E    + LDL L      ++S+P    ELNL++C +T + T S        
Sbjct: 44  QEEDDHDQKEGVEGIKLDLMLAGY---DSSQPQLNQELNLLDCLETGVVTPSFNG---ST 97

Query: 91  EVEPRIFSCNYCQRQFYSSQALGGHQNAHKRERTLAKRGHRV-SSVDFGQRYSSMASLPL 149
             E ++FSCNYCQR FYSSQALGGHQNAHKRERTLAKRG R+ S+  FG  Y   A +P 
Sbjct: 98  STEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMASAAAFGHPY-GFAPVPF 156

Query: 150 H--------GIQVHSMIHKPSYKTPFFG------WKK----QRKEIGNFGGVGAE----- 186
           H        GIQ HSM HKPS    + G      W +    Q+  I              
Sbjct: 157 HGQYSNRTLGIQAHSMSHKPSSYNVYGGEYGQINWSRIPLVQQPAIAKLTSTENHYNHHQ 216

Query: 187 -VPESSLAGGTTRLGKFSPRMVPEGFGGYWLGGVTATHLNTKQDELQK-LDLSLKL 240
            +    L      +G+F    +P  F    L       L   ++E QK LDLSLKL
Sbjct: 217 MMIAPPLTSTCENIGRFDVGRIPVEFPTSELWQRGEELLKPAEEEKQKNLDLSLKL 272


>AT5G25160.1 | Symbols: ZFP3 | zinc finger protein 3 |
           chr5:8687524-8688231 FORWARD LENGTH=235
          Length = 235

 Score =  106 bits (265), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/216 (38%), Positives = 100/216 (46%), Gaps = 49/216 (22%)

Query: 63  NSKPELNLINCFDTNLSTNSSESVVHGNEVEPRIFSCNYCQRQFYSSQALGGHQNAHKRE 122
           NS  ELNLI+C D   S  +  +       E ++FSCNYCQR FYSSQALGGHQNAHKRE
Sbjct: 31  NSSHELNLIDCIDDTTSIVNESTT----STEQKLFSCNYCQRTFYSSQALGGHQNAHKRE 86

Query: 123 RTLAKRGHRV--SSVDFGQRYSSMASLPLH---------GIQVHSMIHKPSYKTPFFG-- 169
           RTLAKRG R+  S+  FG  Y   + LP H         GIQ HS+ HK S    F G  
Sbjct: 87  RTLAKRGQRMAASASAFGHPY-GFSPLPFHGQYNNHRSLGIQAHSISHKLSSYNGFGGHY 145

Query: 170 ----WKK----QRKEIGNF-----------------GGVGAEVPESSLAGGTTRLGKFSP 204
               W +    Q+  IG F                   V +          T R+ + SP
Sbjct: 146 GQINWSRLPFDQQPAIGKFPSMDNFHHHHHQMMMMAPSVNSRSNNIDSPSNTGRVLEGSP 205

Query: 205 RMVPEGFGGYWLGGVTATHLNTKQDELQKLDLSLKL 240
            +        W G        +  +E QKLDLSLKL
Sbjct: 206 TLEQ------WHGDKGLLLSTSHHEEQQKLDLSLKL 235


>AT1G66140.1 | Symbols: ZFP4 | zinc finger protein 4 |
           chr1:24620063-24620845 REVERSE LENGTH=260
          Length = 260

 Score = 80.5 bits (197), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 43/72 (59%), Positives = 50/72 (69%), Gaps = 12/72 (16%)

Query: 92  VEPRIFSCNYCQRQFYSSQALGGHQNAHKRERTLAKRGHR--VSSVDFGQRYSS------ 143
           V  R+FSCNYCQR+FYSSQALGGHQNAHKRERTLAKR  R  ++ V  G+  SS      
Sbjct: 80  VSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGVFPGRGSSSNYAAAA 139

Query: 144 ----MASLPLHG 151
               ++ LPLHG
Sbjct: 140 TAAALSCLPLHG 151


>AT1G24625.1 | Symbols: ZFP7 | zinc finger protein 7 |
           chr1:8726009-8726638 REVERSE LENGTH=209
          Length = 209

 Score = 79.7 bits (195), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 49/96 (51%), Positives = 63/96 (65%), Gaps = 6/96 (6%)

Query: 64  SKPELNLINCFDTNLS-TNSSESVVHGNEVEPRIFSCNYCQRQFYSSQALGGHQNAHKRE 122
           SKPE N ++  D  L+ T + ++     E  PR+FSCNYC+R+FYSSQALGGHQNAHKRE
Sbjct: 26  SKPESNHVS-LDLKLNDTFNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRE 84

Query: 123 RTLAKRGHRVSSVDFG--QRYSSMASLPLHGIQVHS 156
           RT+AKR   +  + FG   R  +  S  L G+Q HS
Sbjct: 85  RTMAKRAMHMGRM-FGHHHRPYTYTSSSL-GMQAHS 118


>AT5G57520.1 | Symbols: ZFP2, ATZFP2 | zinc finger protein 2 |
           chr5:23296019-23296471 FORWARD LENGTH=150
          Length = 150

 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/63 (58%), Positives = 45/63 (71%), Gaps = 4/63 (6%)

Query: 93  EPRIFSCNYCQRQFYSSQALGGHQNAHKRERTLAKRGHRV----SSVDFGQRYSSMASLP 148
           +PR+FSCNYCQR+FYSSQALGGHQNAHK ERTLAK+   +    ++VD  Q Y       
Sbjct: 48  QPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELFRSSNTVDSDQPYPFSGRFE 107

Query: 149 LHG 151
           L+G
Sbjct: 108 LYG 110


>AT5G01860.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr5:335630-336277 FORWARD LENGTH=215
          Length = 215

 Score = 64.3 bits (155), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 25/43 (58%), Positives = 36/43 (83%)

Query: 90  NEVEPRIFSCNYCQRQFYSSQALGGHQNAHKRERTLAKRGHRV 132
           NE + R+F+C +C+++F +SQALGGHQNAHK+ER+LAKR   +
Sbjct: 60  NEAKARVFACTFCKKEFSTSQALGGHQNAHKQERSLAKRRKEI 102


>AT5G14010.1 | Symbols: KNU | C2H2 and C2HC zinc fingers superfamily
           protein | chr5:4522260-4522745 FORWARD LENGTH=161
          Length = 161

 Score = 62.8 bits (151), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/34 (73%), Positives = 29/34 (85%)

Query: 95  RIFSCNYCQRQFYSSQALGGHQNAHKRERTLAKR 128
           R+F C YC R+FY+SQALGGHQNAHKRER  A+R
Sbjct: 36  RLFPCQYCPRKFYTSQALGGHQNAHKRERAAARR 69


>AT3G58070.1 | Symbols: GIS | C2H2 and C2HC zinc fingers superfamily
           protein | chr3:21506845-21507606 REVERSE LENGTH=253
          Length = 253

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 27/35 (77%), Positives = 29/35 (82%)

Query: 95  RIFSCNYCQRQFYSSQALGGHQNAHKRERTLAKRG 129
           R F C+YC R F +SQALGGHQNAHKRER LAKRG
Sbjct: 89  RRFECHYCFRNFPTSQALGGHQNAHKRERQLAKRG 123


>AT1G67030.1 | Symbols: ZFP6 | zinc finger protein 6 |
           chr1:25016644-25017237 FORWARD LENGTH=197
          Length = 197

 Score = 58.2 bits (139), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 33/75 (44%), Positives = 43/75 (57%), Gaps = 2/75 (2%)

Query: 62  ENSKPELNLINCFDTNLSTNSSESVV--HGNEVEPRIFSCNYCQRQFYSSQALGGHQNAH 119
           E S  +L  IN  +T    N S       G+  E R + C YC R+F +SQALGGHQNAH
Sbjct: 4   ETSSLKLFGINLLETTSVQNQSSEPRPGSGSGSESRKYECQYCCREFANSQALGGHQNAH 63

Query: 120 KRERTLAKRGHRVSS 134
           K+ER L KR   +++
Sbjct: 64  KKERQLLKRAQMLAT 78


>AT4G17810.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr4:9906918-9907532 FORWARD LENGTH=204
          Length = 204

 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 1/54 (1%)

Query: 87  VHGNEVEPRIFSCNYCQRQFYSSQALGGHQNAHKRERTLAKRGHRVSSVDFGQR 140
           + G    PR ++CN+C+R+F S+QALGGH N H+R+R  + R H+ S+V    R
Sbjct: 36  ISGTTWPPRSYTCNFCRREFRSAQALGGHMNVHRRDRA-SSRAHQGSTVAAAAR 88


>AT2G41940.1 | Symbols: ZFP8 | zinc finger protein 8 |
           chr2:17507556-17508329 FORWARD LENGTH=257
          Length = 257

 Score = 57.8 bits (138), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 29/39 (74%)

Query: 95  RIFSCNYCQRQFYSSQALGGHQNAHKRERTLAKRGHRVS 133
           R F C+YC R F +SQALGGHQNAHKRER  AKRG   S
Sbjct: 93  RRFECHYCFRNFPTSQALGGHQNAHKRERQHAKRGSMTS 131


>AT5G05120.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr5:1511232-1511837 FORWARD LENGTH=201
          Length = 201

 Score = 56.6 bits (135), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 36/54 (66%)

Query: 75  DTNLSTNSSESVVHGNEVEPRIFSCNYCQRQFYSSQALGGHQNAHKRERTLAKR 128
           D+N +++ S+       +E  I+ C YC R+F  +QALGGHQNAH++ER + K+
Sbjct: 5   DSNYASDISDDASATGSIENPIYKCKYCPRKFDKTQALGGHQNAHRKEREVEKQ 58


>AT1G68360.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr1:25621678-25622412 REVERSE LENGTH=244
          Length = 244

 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 33/52 (63%)

Query: 95  RIFSCNYCQRQFYSSQALGGHQNAHKRERTLAKRGHRVSSVDFGQRYSSMAS 146
           R + C YC R+F +SQALGGHQNAHK+ER   KR    ++ +    +S+  S
Sbjct: 71  RKYECQYCCREFGNSQALGGHQNAHKKERQQLKRAQLQATRNAAANFSNAGS 122


>AT5G06650.1 | Symbols: GIS2 | C2H2 and C2HC zinc fingers
           superfamily protein | chr5:2043486-2044061 FORWARD
           LENGTH=191
          Length = 191

 Score = 51.6 bits (122), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 34/47 (72%), Gaps = 2/47 (4%)

Query: 82  SSESVVHGNEVEPRIFSCNYCQRQFYSSQALGGHQNAHKRERTLAKR 128
           ++ES+   N+ E R F C+YC R F +SQALGGHQNAHKRER   KR
Sbjct: 42  NNESIKDDNK-EKR-FKCHYCFRNFPTSQALGGHQNAHKRERQQTKR 86


>AT5G48890.1 | Symbols:  | C2H2-like zinc finger protein |
           chr5:19820353-19820874 FORWARD LENGTH=173
          Length = 173

 Score = 51.2 bits (121), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 38/55 (69%), Gaps = 2/55 (3%)

Query: 95  RIFSCNYCQRQFYSSQALGGHQNAHKRERTLAKRGHRVSSVDFGQRYSSMASLPL 149
           RIF C +C R+F+SSQALGGHQNAHK+ERT A+R     + DF      + +LP+
Sbjct: 33  RIFPCLFCSRKFHSSQALGGHQNAHKKERTAARR--AKRAYDFVNNNDFLHTLPV 85


>AT2G37740.1 | Symbols: ATZFP10, ZFP10 | zinc-finger protein 10 |
           chr2:15827706-15828620 REVERSE LENGTH=304
          Length = 304

 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 20/47 (42%), Positives = 32/47 (68%)

Query: 83  SESVVHGNEVEPRIFSCNYCQRQFYSSQALGGHQNAHKRERTLAKRG 129
           +E    G+   PR ++C++C+R+F S+QALGGH N H+R+R   K+ 
Sbjct: 25  AEDDAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQA 71


>AT5G27880.1 | Symbols:  | C2H2 and C2HC zinc fingers superfamily
           protein | chr5:9885908-9886744 FORWARD LENGTH=278
          Length = 278

 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 19/34 (55%), Positives = 29/34 (85%)

Query: 95  RIFSCNYCQRQFYSSQALGGHQNAHKRERTLAKR 128
           +I++C++C++ F +SQALGGHQNAHK+ER   K+
Sbjct: 78  KIYTCHFCKKGFSTSQALGGHQNAHKQEREWDKK 111


>AT5G06070.1 | Symbols: RBE, RAB | C2H2 and C2HC zinc fingers
           superfamily protein | chr5:1828426-1829106 REVERSE
           LENGTH=226
          Length = 226

 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 19/35 (54%), Positives = 27/35 (77%)

Query: 94  PRIFSCNYCQRQFYSSQALGGHQNAHKRERTLAKR 128
           PR +SC++C R+F S+QALGGH N H+R+R   K+
Sbjct: 52  PRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQ 86


>AT3G23130.1 | Symbols: SUP, FON1, FLO10 | C2H2 and C2HC zinc
           fingers superfamily protein | chr3:8242504-8243118
           FORWARD LENGTH=204
          Length = 204

 Score = 48.9 bits (115), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 17/31 (54%), Positives = 26/31 (83%)

Query: 94  PRIFSCNYCQRQFYSSQALGGHQNAHKRERT 124
           PR ++C++C+R+F S+QALGGH N H+R+R 
Sbjct: 44  PRSYTCSFCKREFRSAQALGGHMNVHRRDRA 74