Miyakogusa Predicted Gene

Lj3g3v0012290.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0012290.1 tr|D7LAA6|D7LAA6_ARALL ATMRP11 OS=Arabidopsis
lyrata subsp. lyrata GN=ARALYDRAFT_480238 PE=3
SV=1,59.7,0.000000000000009,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL,CUFF.40192.1
         (298 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G07680.1 | Symbols: ATMRP11, MRP11, ABCC13 | multidrug resist...   143   2e-34

>AT2G07680.1 | Symbols: ATMRP11, MRP11, ABCC13 | multidrug
           resistance-associated protein 11 | chr2:3514774-3522491
           FORWARD LENGTH=1404
          Length = 1404

 Score =  143 bits (360), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/273 (35%), Positives = 145/273 (53%), Gaps = 19/273 (6%)

Query: 27  DIVLGLAVNIVTIVMIVLLGIYQKIARGVRRPEAQMALPEKVVLDFIPAVGACFSISNII 86
           DIVLG   N+VT+++I++L I ++  R  RR     +  EK +L   PA+GAC S  +++
Sbjct: 22  DIVLGFGANVVTLLLILILTITRRNGRCNRRK----SYIEKCLLYVTPALGACLSCVDLV 77

Query: 87  FLWKKEHDGHFVEYHKWFYSCSELVVWISIVLFTR--CVSSHYIVLNCALCLWWILKPIL 144
            L +       +     F   S  V+WI+++L  +  C + H +  +  LC WWI + + 
Sbjct: 78  LLVRTNRRREVI---LCFVPLSGFVMWIAVILSLKFACCACH-VFTSQILCFWWIFRFLT 133

Query: 145 GVFHLMTKFPSLEVSVLIIESILVLSNISFGIAINVMRIKRLSTKSSLLEEPLLSNGVDL 204
              HL   F    V     E  L++ +I+FGI+INV+RIK+   K   LE+PL+ +  D 
Sbjct: 134 DALHLNMIFTLQRVQ----EICLIMLDIAFGISINVLRIKQAHPKIIPLEDPLIEDDDD- 188

Query: 205 EEGGNRDLGFNGDLWDLMTFKFITPVMNCGVVKQLDFEDLLPLPTDMGPSPCHEIILSCW 264
                + +  NG  WDL TF +I  +M  G VKQL+ E+LL LP +M P  C E +L CW
Sbjct: 189 ----QKRIEKNGSWWDLFTFGYIGSIMKHGSVKQLELENLLTLPPEMDPFTCCENLLRCW 244

Query: 265 RAQXXXXXXXXXXXRALCSAYGWPYLRLGLLKV 297
           + Q            ++   YGWPY RLGLLKV
Sbjct: 245 QLQECNNYSTPSLIWSIYGVYGWPYFRLGLLKV 277