Miyakogusa Predicted Gene

Lj3g3v0012240.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj3g3v0012240.1 Non Chatacterized Hit- tr|I1MCA3|I1MCA3_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,77.36,9e-19,
,CUFF.40178.1
         (57 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G35736.2 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    82   1e-16
AT2G35736.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...    82   1e-16
AT4G25225.1 | Symbols:  | unknown protein; LOCATED IN: endomembr...    80   3e-16

>AT2G35736.2 | Symbols:  | unknown protein; FUNCTIONS IN:
          molecular_function unknown; INVOLVED IN:
          biological_process unknown; LOCATED IN: endomembrane
          system; EXPRESSED IN: 22 plant structures; EXPRESSED
          DURING: 13 growth stages; BEST Arabidopsis thaliana
          protein match is: unknown protein (TAIR:AT4G25225.1). |
          chr2:15023084-15023254 REVERSE LENGTH=56
          Length = 56

 Score = 81.6 bits (200), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 36/54 (66%), Positives = 45/54 (83%)

Query: 1  MGIIKSCFSFITGTVCGVYLAQNYKLPDITKVADTALFMAKIIEESYRKPKKRD 54
          MGI +SCFSFITG+V GVYLAQNY +P+I K+ +T L +AK +EE+YRKPKK D
Sbjct: 1  MGIFRSCFSFITGSVFGVYLAQNYNVPNIRKLTNTGLVVAKHVEENYRKPKKDD 54


>AT2G35736.1 | Symbols:  | unknown protein; FUNCTIONS IN:
          molecular_function unknown; INVOLVED IN:
          biological_process unknown; LOCATED IN: endomembrane
          system; EXPRESSED IN: 22 plant structures; EXPRESSED
          DURING: 13 growth stages; BEST Arabidopsis thaliana
          protein match is: unknown protein (TAIR:AT4G25225.1);
          Has 78 Blast hits to 78 proteins in 13 species: Archae
          - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78;
          Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
          | chr2:15023084-15023254 REVERSE LENGTH=56
          Length = 56

 Score = 81.6 bits (200), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 36/54 (66%), Positives = 45/54 (83%)

Query: 1  MGIIKSCFSFITGTVCGVYLAQNYKLPDITKVADTALFMAKIIEESYRKPKKRD 54
          MGI +SCFSFITG+V GVYLAQNY +P+I K+ +T L +AK +EE+YRKPKK D
Sbjct: 1  MGIFRSCFSFITGSVFGVYLAQNYNVPNIRKLTNTGLVVAKHVEENYRKPKKDD 54


>AT4G25225.1 | Symbols:  | unknown protein; LOCATED IN:
          endomembrane system; BEST Arabidopsis thaliana protein
          match is: unknown protein (TAIR:AT2G35736.2); Has 78
          Blast hits to 78 proteins in 13 species: Archae - 0;
          Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78;
          Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
          | chr4:12923086-12923256 REVERSE LENGTH=56
          Length = 56

 Score = 80.1 bits (196), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 35/55 (63%), Positives = 43/55 (78%)

Query: 1  MGIIKSCFSFITGTVCGVYLAQNYKLPDITKVADTALFMAKIIEESYRKPKKRDD 55
          MGII+S FSFI GTVCG+Y+AQ Y +P+I K+   A+ MAK +EE YRKPK RDD
Sbjct: 1  MGIIRSSFSFIMGTVCGIYIAQTYNVPNIKKLGHCAVSMAKQVEEKYRKPKSRDD 55