Miyakogusa Predicted Gene

Lj2g3v3372960.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3372960.1 tr|D8TMB2|D8TMB2_VOLCA Phosphoglycerate mutase
OS=Volvox carteri GN=pgm3 PE=4 SV=1,36.18,2e-18,Phosphoglycerate
mutase-like,NULL; His_Phos_1,Histidine phosphatase superfamily,
clade-1; no descrip,NODE_58374_length_816_cov_10.247549.path2.1
         (197 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G38370.1 | Symbols:  | Phosphoglycerate mutase family protein...   265   1e-71

>AT4G38370.1 | Symbols:  | Phosphoglycerate mutase family protein |
           chr4:17970112-17971222 REVERSE LENGTH=225
          Length = 225

 Score =  265 bits (678), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 124/197 (62%), Positives = 156/197 (79%), Gaps = 3/197 (1%)

Query: 1   MENGIRPEFQLATDGVSQAQLAAKLFHKELEANDVPLANVRICYSPFSRTTHTAKIVATV 60
           MENG+ PE+QLA DGV+QA+LA + F ++L+ +++ L  VRICYSPFSRTTHTA++VA V
Sbjct: 32  MENGVLPEYQLAPDGVAQARLAGESFLQQLKESNIELDKVRICYSPFSRTTHTARVVAKV 91

Query: 61  LNLPFEGPQCKVIEDLRERFFGPSFELLSHDKYEQIWELDEKDPLVGPEGGESVKDVACR 120
           LNLPF+ PQCK++EDLRER+FGP+FEL SHDKY +IW LDEKDP +GPEGGES  DV  R
Sbjct: 92  LNLPFDAPQCKMMEDLRERYFGPTFELKSHDKYPEIWALDEKDPFMGPEGGESADDVVSR 151

Query: 121 LARAMAVMESEFEGCAVLVVSHGDTLQILQTILHAANQHKEPAYDDLASILNAVQVAPVL 180
           LA AM  ME+E++ CA+LVVSHGD LQ+LQ + H+A Q +    D LA      +VA VL
Sbjct: 152 LATAMKSMEAEYQRCAILVVSHGDPLQMLQNVFHSAKQQEG---DGLAEKFQLSRVASVL 208

Query: 181 SQHRKYALLTGELRGVL 197
           SQHRK+ALLTGELR ++
Sbjct: 209 SQHRKFALLTGELRPLI 225