Miyakogusa Predicted Gene

Lj2g3v3351920.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3351920.1 Non Chatacterized Hit- tr|D7L8R9|D7L8R9_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,41.52,2e-19,DUF630,Domain of unknown function DUF630; seg,NULL;
UNCHARACTERIZED,NULL,CUFF.40126.1
         (170 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G17110.1 | Symbols:  | Protein of unknown function (DUF630 an...    97   4e-21
AT4G35240.2 | Symbols:  | Protein of unknown function (DUF630 an...    96   1e-20
AT4G35240.1 | Symbols:  | Protein of unknown function (DUF630 an...    96   1e-20
AT1G20530.1 | Symbols:  | Protein of unknown function (DUF630 an...    77   5e-15
AT2G19090.1 | Symbols:  | Protein of unknown function (DUF630 an...    68   3e-12
AT1G21740.1 | Symbols:  | Protein of unknown function (DUF630 an...    66   1e-11
AT1G77500.1 | Symbols:  | Protein of unknown function (DUF630 an...    60   5e-10
AT4G30130.1 | Symbols:  | Protein of unknown function (DUF630 an...    59   2e-09
AT2G27090.1 | Symbols:  | Protein of unknown function (DUF630 an...    54   5e-08
AT1G02110.1 | Symbols:  | Protein of unknown function (DUF630 an...    50   7e-07
AT3G51290.2 | Symbols:  | Protein of unknown function (DUF630) ;...    48   3e-06
AT3G51290.1 | Symbols:  | Protein of unknown function (DUF630) ;...    47   5e-06
AT3G60320.1 | Symbols:  | Protein of unknown function (DUF630 an...    47   7e-06

>AT2G17110.1 | Symbols:  | Protein of unknown function (DUF630 and
          DUF632) | chr2:7443366-7445969 REVERSE LENGTH=733
          Length = 733

 Score = 97.4 bits (241), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 3/63 (4%)

Query: 1  MGCASSKLDDLPAVALCRDRCSFLDEAIHQRYALAAAHLAYINSLNAIGHSLHSFIQQED 60
          MGC++SKLDDLPAVALCRDRCSFL+ AIHQRYAL+ AH++Y  SL AI HSLH FI   +
Sbjct: 1  MGCSTSKLDDLPAVALCRDRCSFLEAAIHQRYALSEAHVSYTQSLKAISHSLHQFI---N 57

Query: 61 HTH 63
          H H
Sbjct: 58 HHH 60


>AT4G35240.2 | Symbols:  | Protein of unknown function (DUF630 and
          DUF632) | chr4:16761334-16764324 REVERSE LENGTH=865
          Length = 865

 Score = 95.9 bits (237), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 3/63 (4%)

Query: 1  MGCASSKLDDLPAVALCRDRCSFLDEAIHQRYALAAAHLAYINSLNAIGHSLHSFIQQED 60
          MGC SSKLDDLPAVALCR+RC+FL+ AIHQRYALA +H+AY +SL  IGHSLH FI   +
Sbjct: 1  MGCTSSKLDDLPAVALCRERCAFLEAAIHQRYALAESHVAYTHSLREIGHSLHLFI---N 57

Query: 61 HTH 63
          H H
Sbjct: 58 HHH 60


>AT4G35240.1 | Symbols:  | Protein of unknown function (DUF630 and
          DUF632) | chr4:16761334-16764324 REVERSE LENGTH=865
          Length = 865

 Score = 95.9 bits (237), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/63 (71%), Positives = 52/63 (82%), Gaps = 3/63 (4%)

Query: 1  MGCASSKLDDLPAVALCRDRCSFLDEAIHQRYALAAAHLAYINSLNAIGHSLHSFIQQED 60
          MGC SSKLDDLPAVALCR+RC+FL+ AIHQRYALA +H+AY +SL  IGHSLH FI   +
Sbjct: 1  MGCTSSKLDDLPAVALCRERCAFLEAAIHQRYALAESHVAYTHSLREIGHSLHLFI---N 57

Query: 61 HTH 63
          H H
Sbjct: 58 HHH 60


>AT1G20530.1 | Symbols:  | Protein of unknown function (DUF630 and
          DUF632) | chr1:7108370-7110377 REVERSE LENGTH=614
          Length = 614

 Score = 77.0 bits (188), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/58 (60%), Positives = 44/58 (75%)

Query: 1  MGCASSKLDDLPAVALCRDRCSFLDEAIHQRYALAAAHLAYINSLNAIGHSLHSFIQQ 58
          MGC+ SKLD LPAV+LCRDRCS L++ + + YALA AH AY+ SLN +G +LH F Q 
Sbjct: 1  MGCSPSKLDGLPAVSLCRDRCSSLEDTLRRSYALADAHSAYLLSLNTVGPALHRFFQH 58


>AT2G19090.1 | Symbols:  | Protein of unknown function (DUF630 and
          DUF632) | chr2:8265178-8267879 REVERSE LENGTH=814
          Length = 814

 Score = 67.8 bits (164), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/63 (47%), Positives = 42/63 (66%)

Query: 1  MGCASSKLDDLPAVALCRDRCSFLDEAIHQRYALAAAHLAYINSLNAIGHSLHSFIQQED 60
          MGC+ SKLDD  AV +C+DR  F+ +AI  R   A+ H+AYI+SL  +  +LH FI Q D
Sbjct: 1  MGCSHSKLDDEEAVQICKDRKRFIKQAIEHRTKFASGHIAYIHSLRKVSDALHDFILQGD 60

Query: 61 HTH 63
          + +
Sbjct: 61 NNN 63


>AT1G21740.1 | Symbols:  | Protein of unknown function (DUF630 and
          DUF632) | chr1:7641580-7645078 FORWARD LENGTH=953
          Length = 953

 Score = 65.9 bits (159), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/59 (50%), Positives = 38/59 (64%)

Query: 1  MGCASSKLDDLPAVALCRDRCSFLDEAIHQRYALAAAHLAYINSLNAIGHSLHSFIQQE 59
          MGC  SK+DD P V LCR+R   +  A H R ALAAAHL+Y  SL  +G S+  F+ +E
Sbjct: 1  MGCGGSKVDDQPLVILCRERKQLIKAASHHRCALAAAHLSYFQSLCDVGDSIKRFVDEE 59


>AT1G77500.1 | Symbols:  | Protein of unknown function (DUF630 and
          DUF632) | chr1:29121753-29124937 FORWARD LENGTH=879
          Length = 879

 Score = 60.5 bits (145), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/59 (45%), Positives = 36/59 (61%)

Query: 1  MGCASSKLDDLPAVALCRDRCSFLDEAIHQRYALAAAHLAYINSLNAIGHSLHSFIQQE 59
          MGC  SK+D+ P V LCR+R   L  A + R ALA AHL Y  SL+ +G ++  F+  E
Sbjct: 1  MGCGGSKVDNQPIVILCRERKELLKAASYHRSALAVAHLTYFQSLSDVGEAIQRFVDDE 59


>AT4G30130.1 | Symbols:  | Protein of unknown function (DUF630 and
          DUF632) | chr4:14735401-14737793 FORWARD LENGTH=725
          Length = 725

 Score = 58.5 bits (140), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/60 (40%), Positives = 38/60 (63%)

Query: 1  MGCASSKLDDLPAVALCRDRCSFLDEAIHQRYALAAAHLAYINSLNAIGHSLHSFIQQED 60
          MGC+ SK DD  AV +C+DR  F+ +A+  R   A+ H+AYI SL  +  +L  +I+ ++
Sbjct: 1  MGCSHSKFDDDEAVQICKDRKRFIKQAVEHRTGFASGHIAYIQSLRKVSDALREYIEGDE 60


>AT2G27090.1 | Symbols:  | Protein of unknown function (DUF630 and
          DUF632) | chr2:11567691-11570345 REVERSE LENGTH=743
          Length = 743

 Score = 53.9 bits (128), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/59 (40%), Positives = 40/59 (67%)

Query: 1  MGCASSKLDDLPAVALCRDRCSFLDEAIHQRYALAAAHLAYINSLNAIGHSLHSFIQQE 59
          MG ++S++D+  A+ LCR+R  F+ +A+  R  LAAAH++Y+ SL + G +L  F + E
Sbjct: 1  MGASTSRIDEDKALQLCRERKKFVQQALDGRCLLAAAHVSYVQSLKSTGTALRKFSETE 59


>AT1G02110.1 | Symbols:  | Protein of unknown function (DUF630 and
          DUF632) | chr1:392939-395434 FORWARD LENGTH=703
          Length = 703

 Score = 50.1 bits (118), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/59 (44%), Positives = 35/59 (59%)

Query: 1  MGCASSKLDDLPAVALCRDRCSFLDEAIHQRYALAAAHLAYINSLNAIGHSLHSFIQQE 59
          MGC +SKLD   AV  C++R   + +A++ R+ LAAAH  Y  SL   G +L SF   E
Sbjct: 1  MGCTASKLDSEDAVRRCKERRRLMKDAVYARHHLAAAHSDYCRSLRLTGSALSSFAAGE 59


>AT3G51290.2 | Symbols:  | Protein of unknown function (DUF630)
          ;Protein of unknown function (DUF632) |
          chr3:19039980-19044215 FORWARD LENGTH=798
          Length = 798

 Score = 47.8 bits (112), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 34/64 (53%)

Query: 1  MGCASSKLDDLPAVALCRDRCSFLDEAIHQRYALAAAHLAYINSLNAIGHSLHSFIQQED 60
          MGC  S++D    V+ C+ R  +L   +  R  L+ +H  Y+ SL A+G SL  F  +E 
Sbjct: 1  MGCCQSRIDSKEIVSRCKARKRYLKHLVKARQTLSVSHALYLRSLRAVGSSLVHFSSKET 60

Query: 61 HTHL 64
            HL
Sbjct: 61 PLHL 64


>AT3G51290.1 | Symbols:  | Protein of unknown function (DUF630)
          ;Protein of unknown function (DUF632) |
          chr3:19039980-19042437 FORWARD LENGTH=634
          Length = 634

 Score = 47.4 bits (111), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/64 (35%), Positives = 34/64 (53%)

Query: 1  MGCASSKLDDLPAVALCRDRCSFLDEAIHQRYALAAAHLAYINSLNAIGHSLHSFIQQED 60
          MGC  S++D    V+ C+ R  +L   +  R  L+ +H  Y+ SL A+G SL  F  +E 
Sbjct: 1  MGCCQSRIDSKEIVSRCKARKRYLKHLVKARQTLSVSHALYLRSLRAVGSSLVHFSSKET 60

Query: 61 HTHL 64
            HL
Sbjct: 61 PLHL 64


>AT3G60320.1 | Symbols:  | Protein of unknown function (DUF630 and
          DUF632) | chr3:22292073-22295228 REVERSE LENGTH=796
          Length = 796

 Score = 47.0 bits (110), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 37/59 (62%)

Query: 1  MGCASSKLDDLPAVALCRDRCSFLDEAIHQRYALAAAHLAYINSLNAIGHSLHSFIQQE 59
          MGCA+SKLD+  AV  C+DR   + EA++ R+ LAAAH  Y  SL   G +L SF   E
Sbjct: 1  MGCAASKLDNEDAVRRCKDRRRLMKEAVYARHHLAAAHADYCRSLRITGSALSSFASGE 59