Miyakogusa Predicted Gene
- Lj2g3v3340810.3
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3340810.3 Non Chatacterized Hit- tr|I1L974|I1L974_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.17392 PE,79.7,0,folC:
bifunctional protein FolC,Folylpolyglutamate synthetase; seg,NULL;
MurD-like peptide ligases, ,CUFF.40127.3
(549 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G41480.1 | Symbols: EMB9, GLA1, ATDFA, DFA | Folylpolyglutama... 555 e-158
AT3G55630.3 | Symbols: ATDFD, DFD, FPGS3 | DHFS-FPGS homolog D |... 130 3e-30
AT3G55630.2 | Symbols: ATDFD, DFD, FPGS3 | DHFS-FPGS homolog D |... 127 2e-29
AT5G05980.2 | Symbols: ATDFB, DFB, FPGS1 | DHFS-FPGS homolog B |... 124 1e-28
AT5G05980.1 | Symbols: ATDFB, DFB, FPGS1 | DHFS-FPGS homolog B |... 124 1e-28
AT3G10160.1 | Symbols: ATDFC, DFC, FPGS2 | DHFS-FPGS homolog C |... 114 1e-25
AT3G55630.1 | Symbols: ATDFD, DFD, FPGS3 | DHFS-FPGS homolog D |... 111 1e-24
>AT5G41480.1 | Symbols: EMB9, GLA1, ATDFA, DFA | Folylpolyglutamate
synthetase family protein | chr5:16595967-16598523
FORWARD LENGTH=530
Length = 530
Score = 555 bits (1429), Expect = e-158, Method: Compositional matrix adjust.
Identities = 301/523 (57%), Positives = 373/523 (71%), Gaps = 36/523 (6%)
Query: 29 SRQEDPEMKDLLDYIDSLKNYEKSGVPTGAGTDSDDGFDLRRMTRLMDHFGNPHSKFKAV 88
S EDPE++D + +++SLKNYEKSGVP GAGTDSDDGFDL RM RLM NPH K+K V
Sbjct: 38 SSTEDPELRDFVGFLESLKNYEKSGVPKGAGTDSDDGFDLGRMKRLMLRLRNPHYKYKVV 97
Query: 89 HIAGTKGKGSTAAFISNILRTEGYSVGCYTSPHIQTIRERILLGRSGDPVSAKLLNGLFH 148
H+AGTKGKGST+AF+SNILR GYSVGCY+SPHI +I+ERI +G+PVSA LN LF+
Sbjct: 98 HVAGTKGKGSTSAFLSNILRAGGYSVGCYSSPHILSIKERI--SCNGEPVSASTLNDLFY 155
Query: 149 RIKQDLDQAIKKENGCISHFEVFTAMAFILFAEENVDIAVIEAGLGGARDATNIISSSGL 208
+K L+Q+I++ENG +SHFE+ T +AF LF +ENVDIAVIEAGLGGARDATN+I SS L
Sbjct: 156 SVKPILEQSIQEENGSLSHFEILTGIAFSLFEKENVDIAVIEAGLGGARDATNVIESSNL 215
Query: 209 AAAVITTVGEEHLAALGGSLETIAMAKAGIIKQGCPLVLGGPFLPHIERIIQDKAITLDS 268
AA+VITT+GEEH+AALGGSLE+IA AK+GIIK G P+VLGGPFLPHIE I++ KA ++ S
Sbjct: 216 AASVITTIGEEHMAALGGSLESIAEAKSGIIKHGRPVVLGGPFLPHIEGILRSKAASVSS 275
Query: 269 PVVSACDTGNRCHIKSFSIHNG-RPCQICDIEIQIMXXXXXXXXXXXXXXQMPGDHQLQN 327
V+ A + G+ IK NG CQ CDI IQ +M G HQLQN
Sbjct: 276 SVILASNIGSSSSIKGIINKNGIGLCQSCDIVIQNEKDDQPIVELSDVNLRMLGHHQLQN 335
Query: 328 AATATCVALCLRNLGW-RISDESIRSGLEHTYLVGRSQFLTSEEAEVLGLAGITVLLDGA 386
A TATCV+LCLR+ G R++DE+IR GLE+T L+GRSQFLT +EAE L L G TVLLDGA
Sbjct: 336 AVTATCVSLCLRDQGCGRVTDEAIRIGLENTRLLGRSQFLTPKEAETLLLPGATVLLDGA 395
Query: 387 HTKESAKALINTIRMAFPKARFAFVVAMANDKDHVGFAREVLSGVHAETVLLTEANIAGD 446
HTKESA+AL I+ FP+ R FVVAMA+DKDHV FA+E+LSG+ E V+LTEA+I G
Sbjct: 396 HTKESARALKEMIKKDFPEKRLVFVVAMASDKDHVSFAKELLSGLKPEAVILTEADIGGG 455
Query: 447 VTRTTPASSLRDSWIKASEELGIGICHXXXXXXXXXXXXXXQSVSSESNLGDDGKTMLVT 506
R+T +S L++SWIKA++ELG S S + KT+L
Sbjct: 456 KIRSTESSVLKESWIKAADELG-----------------------SRSMEASENKTVL-- 490
Query: 507 ESSLKGCLRTANKILT--RRGDEKGVVVITGSLHIVSSVLASI 547
G L+ A KIL+ + G+V++TGSLHIVSSVLAS+
Sbjct: 491 -----GSLKLAYKILSDDTTSSDSGMVIVTGSLHIVSSVLASL 528
>AT3G55630.3 | Symbols: ATDFD, DFD, FPGS3 | DHFS-FPGS homolog D |
chr3:20636785-20639395 FORWARD LENGTH=492
Length = 492
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 104/329 (31%), Positives = 147/329 (44%), Gaps = 68/329 (20%)
Query: 83 SKFKAVHIAGTKGKGSTAAFISNILRTEGYSVGCYTSPHIQTIRERILLGRSGDPVSAKL 142
S+ K +H+AGTKGKGST F +ILR G G +TSPH+ +RER L +G +S +
Sbjct: 56 SQMKIIHVAGTKGKGSTCTFAESILRCYGLRTGLFTSPHLIDVRERFRL--NGIEISQEK 113
Query: 143 LNGLFHRIKQDLDQAIKKENGCISHFEVFTAMAFILFAEENVDIAVIEAGLGGARDATNI 202
F L + E ++F +AF +F E VD+ ++E GLGG DATN+
Sbjct: 114 FVNYFWCCFHKLKEKTSNEVPMPTYFCFLALLAFKIFTTEQVDVVILEVGLGGRFDATNV 173
Query: 203 ISSSGLAAAVITTVGEEHLAALGGSLETIAMAKAGIIKQGCP-LVLGGPFLPHIERIIQD 261
I + I+++G +H+ LG +L IA KAGI K G P + P R++ +
Sbjct: 174 IQKPVVCG--ISSLGYDHMEILGYTLAEIAAEKAGIFKSGVPAFTVAQP--DEAMRVLNE 229
Query: 262 KAITLDS--PVVSACDTGNRCHIKSFSIHNGRPCQICDIEIQIMXXXXXXXXXXXXXXQM 319
KA L+ VV D+ R ++
Sbjct: 230 KASKLEVNLQVVEPLDSSQRLGLQ------------------------------------ 253
Query: 320 PGDHQLQNAATATCVALC---LRNLGWRISD-----------ESIRSGLEHTYLVGRSQF 365
G+HQ NA A VALC L+ +G I D E SGL + YL+GR+
Sbjct: 254 -GEHQYLNAGLA--VALCSTFLKEIG--IEDKNGLDQTNGLPEKFISGLSNAYLMGRAMI 308
Query: 366 LTSEEAEVLGLAGITVLLDGAHTKESAKA 394
+ E I LDGAH+ ES +A
Sbjct: 309 VPDSELP----EEIVYYLDGAHSPESMEA 333
>AT3G55630.2 | Symbols: ATDFD, DFD, FPGS3 | DHFS-FPGS homolog D |
chr3:20636785-20639395 FORWARD LENGTH=491
Length = 491
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 106/333 (31%), Positives = 150/333 (45%), Gaps = 77/333 (23%)
Query: 83 SKFKAVHIAGTKGKGSTAAFISNILRTEGYSVGCYTSPHIQTIRERILLGRSGDPVSA-K 141
S+ K +H+AGTKGKGST F +ILR G G +TSPH+ +RER L +G +S K
Sbjct: 56 SQMKIIHVAGTKGKGSTCTFAESILRCYGLRTGLFTSPHLIDVRERFRL--NGIEISQEK 113
Query: 142 LLNGL---FHRIKQDLDQAIKKENGCISHFEVFTAMAFILFAEENVDIAVIEAGLGGARD 198
+N FH++K+ + ++F +AF +F E VD+ ++E GLGG D
Sbjct: 114 FVNYFWCCFHKLKEKTSNEVPMP----TYFCFLALLAFKIFTTEQVDVVILEVGLGGRFD 169
Query: 199 ATNIISSSGLAAAVITTVGEEHLAALGGSLETIAMAKAGIIKQGCP-LVLGGPFLPHIER 257
ATNI I+++G +H+ LG +L IA KAGI K G P + P R
Sbjct: 170 ATNIQKP---VVCGISSLGYDHMEILGYTLAEIAAEKAGIFKSGVPAFTVAQP--DEAMR 224
Query: 258 IIQDKAITLDS--PVVSACDTGNRCHIKSFSIHNGRPCQICDIEIQIMXXXXXXXXXXXX 315
++ +KA L+ VV D+ R ++
Sbjct: 225 VLNEKASKLEVNLQVVEPLDSSQRLGLQ-------------------------------- 252
Query: 316 XXQMPGDHQLQNAATATCVALC---LRNLGWRISD-----------ESIRSGLEHTYLVG 361
G+HQ NA A VALC L+ +G I D E SGL + YL+G
Sbjct: 253 -----GEHQYLNAGLA--VALCSTFLKEIG--IEDKNGLDQTNGLPEKFISGLSNAYLMG 303
Query: 362 RSQFLTSEEAEVLGLAGITVLLDGAHTKESAKA 394
R+ + E I LDGAH+ ES +A
Sbjct: 304 RAMIVPDSELP----EEIVYYLDGAHSPESMEA 332
>AT5G05980.2 | Symbols: ATDFB, DFB, FPGS1 | DHFS-FPGS homolog B |
chr5:1799738-1804177 REVERSE LENGTH=513
Length = 513
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 145/335 (43%), Gaps = 58/335 (17%)
Query: 84 KFKAVHIAGTKGKGSTAAFISNILRTEGYSVGCYTSPHIQTIRERILLGRSGDPVSAKLL 143
K +H+AGTKGKGST F +I+R G+ G +TSPH+ +RER L G +S +
Sbjct: 53 KMNVIHVAGTKGKGSTCTFTESIIRNYGFRTGLFTSPHLIDVRERFRL--DGVDISEEKF 110
Query: 144 NGLFHRIKQDLDQAIKKENGCISHFEVFTAMAFILFAEENVDIAVIEAGLGGARDATNII 203
G F L + +E ++F +AF +FA E VD A++E GLGG DATN +
Sbjct: 111 LGYFWWCYNRLKERTNEEIPMPTYFRFLALLAFKIFAAEEVDAAILEVGLGGKFDATNAV 170
Query: 204 SSSGLAAAVITTVGEEHLAALGGSLETIAMAKAGIIKQGCPLVLGGPFLPHIERIIQDKA 263
+ I+++G +H+ LG +L IA KAGI K G P P R++++KA
Sbjct: 171 QKPVVCG--ISSLGYDHMEILGDTLGKIAGEKAGIFKLGVP-AFTVPQPDEAMRVLEEKA 227
Query: 264 ------ITLDSPVVSACDTGNRCHIKSFSIHNGRPCQICDIEIQIMXXXXXXXXXXXXXX 317
+ + P+ + +G + +
Sbjct: 228 SETEVNLEVVQPLTARLLSGQKLGLD---------------------------------- 253
Query: 318 QMPGDHQLQNAATATCVA-LCLRNLG---------WRISDESIRSGLEHTYLVGRSQFLT 367
G+HQ NA A +A + L+ +G I E GL L GR+Q +
Sbjct: 254 ---GEHQYVNAGLAVSLASIWLQQIGKLEVPSRTQMSILPEKFIKGLATASLQGRAQVVP 310
Query: 368 SEEAEVLGLAGITVLLDGAHTKESAKALINTIRMA 402
+ E + LDGAH+ ES +A +A
Sbjct: 311 DQYTESRTSGDLVFYLDGAHSPESMEACAKWFSVA 345
>AT5G05980.1 | Symbols: ATDFB, DFB, FPGS1 | DHFS-FPGS homolog B |
chr5:1799738-1804441 REVERSE LENGTH=571
Length = 571
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 145/335 (43%), Gaps = 58/335 (17%)
Query: 84 KFKAVHIAGTKGKGSTAAFISNILRTEGYSVGCYTSPHIQTIRERILLGRSGDPVSAKLL 143
K +H+AGTKGKGST F +I+R G+ G +TSPH+ +RER L G +S +
Sbjct: 111 KMNVIHVAGTKGKGSTCTFTESIIRNYGFRTGLFTSPHLIDVRERFRL--DGVDISEEKF 168
Query: 144 NGLFHRIKQDLDQAIKKENGCISHFEVFTAMAFILFAEENVDIAVIEAGLGGARDATNII 203
G F L + +E ++F +AF +FA E VD A++E GLGG DATN +
Sbjct: 169 LGYFWWCYNRLKERTNEEIPMPTYFRFLALLAFKIFAAEEVDAAILEVGLGGKFDATNAV 228
Query: 204 SSSGLAAAVITTVGEEHLAALGGSLETIAMAKAGIIKQGCPLVLGGPFLPHIERIIQDKA 263
+ I+++G +H+ LG +L IA KAGI K G P P R++++KA
Sbjct: 229 QKPVVCG--ISSLGYDHMEILGDTLGKIAGEKAGIFKLGVP-AFTVPQPDEAMRVLEEKA 285
Query: 264 ------ITLDSPVVSACDTGNRCHIKSFSIHNGRPCQICDIEIQIMXXXXXXXXXXXXXX 317
+ + P+ + +G + +
Sbjct: 286 SETEVNLEVVQPLTARLLSGQKLGLD---------------------------------- 311
Query: 318 QMPGDHQLQNAATATCVA-LCLRNLG---------WRISDESIRSGLEHTYLVGRSQFLT 367
G+HQ NA A +A + L+ +G I E GL L GR+Q +
Sbjct: 312 ---GEHQYVNAGLAVSLASIWLQQIGKLEVPSRTQMSILPEKFIKGLATASLQGRAQVVP 368
Query: 368 SEEAEVLGLAGITVLLDGAHTKESAKALINTIRMA 402
+ E + LDGAH+ ES +A +A
Sbjct: 369 DQYTESRTSGDLVFYLDGAHSPESMEACAKWFSVA 403
>AT3G10160.1 | Symbols: ATDFC, DFC, FPGS2 | DHFS-FPGS homolog C |
chr3:3139588-3143949 REVERSE LENGTH=625
Length = 625
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 145/333 (43%), Gaps = 60/333 (18%)
Query: 84 KFKAVHIAGTKGKGSTAAFISNILRTEGYSVGCYTSPHIQTIRERILLGRSGDPVSAKLL 143
+ K +H+AGTKGKGST F ILR G+ G +TSPH+ +RER + G +S +
Sbjct: 130 ELKVIHVAGTKGKGSTCVFSEAILRNCGFRTGMFTSPHLIDVRERFRI--DGLDISEEKF 187
Query: 144 NGLFHRIKQDLDQAIKKENGCISHFEVFTAMAFILFAEENVDIAVIEAGLGGARDATNII 203
F + L + F+ T +AF +F E VD+AVIE GLGG D+TN+I
Sbjct: 188 LQYFWECWKLLKEKAVDGLTMPPLFQFLTVLAFKIFVCEKVDVAVIEVGLGGKLDSTNVI 247
Query: 204 SSSGLAAAVITTVGEEHLAALGGSLETIAMAKAGIIKQGCPLVLGGPFLPHIERIIQDKA 263
+ I ++G +H+ LG +L IA KAGI K P P L ++Q A
Sbjct: 248 QKPVVCG--IASLGMDHMDILGNTLADIAFHKAGIFKPQIP-AFTVPQLSEAMDVLQKTA 304
Query: 264 ITLDSP--VVSACDTGNRCHIKSFSIHNGRPCQICDIEIQIMXXXXXXXXXXXXXXQMPG 321
L+ P VV+ + P ++ + + + G
Sbjct: 305 NNLEVPLEVVAPLE----------------PKKLDGVTL-----------------GLSG 331
Query: 322 DHQLQNAATATCVALCL--RNLGWR--ISDESIRS--------GLEHTYLVGRSQFL--- 366
DHQL NA A ++ C R W+ +ES + GL L GR+Q +
Sbjct: 332 DHQLVNAGLAVSLSRCWLQRTGNWKKIFPNESKETEIPVAFCRGLATARLHGRAQVVHDV 391
Query: 367 -----TSEEAEVLGLAGITVLLDGAHTKESAKA 394
S ++ + LDGAH+ ES +A
Sbjct: 392 VSDPQDSSDSMETPCGDLIFYLDGAHSPESMEA 424
>AT3G55630.1 | Symbols: ATDFD, DFD, FPGS3 | DHFS-FPGS homolog D |
chr3:20636785-20639395 FORWARD LENGTH=470
Length = 470
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/333 (30%), Positives = 144/333 (43%), Gaps = 98/333 (29%)
Query: 83 SKFKAVHIAGTKGKGSTAAFISNILRTEGYSVGCYTSPHIQTIRERILLGRSGDPVSA-K 141
S+ K +H+AGTKGKGST F +ILR G G +TSPH+ +RER L +G +S K
Sbjct: 56 SQMKIIHVAGTKGKGSTCTFAESILRCYGLRTGLFTSPHLIDVRERFRL--NGIEISQEK 113
Query: 142 LLNGL---FHRIKQDLDQAIKKENGCISHFEVFTAMAFILFAEENVDIAVIEAGLGGARD 198
+N FH++K+ K N VD+ ++E GLGG D
Sbjct: 114 FVNYFWCCFHKLKE------KTSN--------------------EVDVVILEVGLGGRFD 147
Query: 199 ATNIISSSGLAAAVITTVGEEHLAALGGSLETIAMAKAGIIKQGCP-LVLGGPFLPHIER 257
ATN+I + I+++G +H+ LG +L IA KAGI K G P + P R
Sbjct: 148 ATNVIQKPVVCG--ISSLGYDHMEILGYTLAEIAAEKAGIFKSGVPAFTVAQP--DEAMR 203
Query: 258 IIQDKAITLDS--PVVSACDTGNRCHIKSFSIHNGRPCQICDIEIQIMXXXXXXXXXXXX 315
++ +KA L+ VV D+ R ++
Sbjct: 204 VLNEKASKLEVNLQVVEPLDSSQRLGLQ-------------------------------- 231
Query: 316 XXQMPGDHQLQNAATATCVALC---LRNLGWRISD-----------ESIRSGLEHTYLVG 361
G+HQ NA A VALC L+ +G I D E SGL + YL+G
Sbjct: 232 -----GEHQYLNAGLA--VALCSTFLKEIG--IEDKNGLDQTNGLPEKFISGLSNAYLMG 282
Query: 362 RSQFLTSEEAEVLGLAGITVLLDGAHTKESAKA 394
R+ + E I LDGAH+ ES +A
Sbjct: 283 RAMIVPDSELP----EEIVYYLDGAHSPESMEA 311