Miyakogusa Predicted Gene
- Lj2g3v3339790.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3339790.1 Non Chatacterized Hit- tr|F6HGR7|F6HGR7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,27.78,9e-19,PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
repeat; PENTATRICOPEPTIDE (PPR) REPEAT-CONTAIN,CUFF.40120.1
(330 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 419 e-117
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 3e-69
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 258 5e-69
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 257 9e-69
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 1e-67
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 250 1e-66
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 3e-64
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 241 4e-64
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 239 2e-63
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 1e-62
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 235 2e-62
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 3e-62
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 234 6e-62
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 234 6e-62
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 234 6e-62
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 234 8e-62
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 234 9e-62
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 233 1e-61
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 2e-61
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 6e-61
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 2e-60
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 228 4e-60
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 228 5e-60
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 3e-59
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 225 3e-59
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 224 6e-59
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 9e-59
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 223 1e-58
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 223 2e-58
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 222 3e-58
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 4e-58
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 221 4e-58
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 6e-58
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 8e-58
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 1e-57
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 219 2e-57
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 2e-57
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 4e-57
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 4e-57
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 4e-57
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 5e-57
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 218 6e-57
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 218 6e-57
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 217 1e-56
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 1e-56
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 216 1e-56
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 216 2e-56
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 4e-56
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 4e-56
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 213 1e-55
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 1e-55
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 3e-55
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 5e-55
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 211 5e-55
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 6e-55
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 210 9e-55
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 210 1e-54
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 209 2e-54
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 2e-54
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 5e-54
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 208 5e-54
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 207 7e-54
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 206 2e-53
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 3e-53
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 3e-53
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 205 4e-53
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 9e-53
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 203 1e-52
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 203 2e-52
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 202 2e-52
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 2e-52
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 2e-52
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 2e-52
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 2e-52
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 3e-52
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 202 3e-52
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 4e-52
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 201 4e-52
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 201 5e-52
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 6e-52
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 201 6e-52
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 200 1e-51
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 199 2e-51
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 199 2e-51
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 198 3e-51
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 197 9e-51
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 196 2e-50
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 2e-50
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 2e-50
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 2e-50
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 196 3e-50
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 195 3e-50
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 7e-50
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 194 8e-50
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 193 1e-49
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 1e-49
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 193 1e-49
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 192 3e-49
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 192 4e-49
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 191 6e-49
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 191 8e-49
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 9e-49
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 1e-48
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 190 1e-48
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 1e-48
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 190 1e-48
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 1e-48
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 190 1e-48
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 3e-48
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 3e-48
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 3e-48
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 188 4e-48
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 188 4e-48
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 186 2e-47
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 186 2e-47
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 3e-47
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 185 3e-47
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 4e-47
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 185 4e-47
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 6e-47
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 184 7e-47
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 184 9e-47
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 183 1e-46
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 183 1e-46
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 2e-46
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 2e-46
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 182 3e-46
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 182 3e-46
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 4e-46
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 6e-46
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 7e-46
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 181 8e-46
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 2e-45
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 179 2e-45
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 179 3e-45
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 3e-45
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 4e-45
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 178 6e-45
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 7e-45
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 177 9e-45
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 2e-44
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 176 2e-44
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 174 6e-44
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 6e-44
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 8e-44
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 174 1e-43
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 173 1e-43
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 173 2e-43
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 2e-43
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 2e-43
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 172 3e-43
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 171 5e-43
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 171 6e-43
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 171 8e-43
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 168 4e-42
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 167 1e-41
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 167 1e-41
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 167 1e-41
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 166 3e-41
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 4e-41
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 5e-41
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 164 9e-41
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 163 1e-40
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 1e-40
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 162 2e-40
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 8e-40
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 8e-40
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 1e-39
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 1e-39
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 157 8e-39
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 157 8e-39
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 156 2e-38
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 155 3e-38
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 155 5e-38
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 6e-38
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 6e-38
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 153 2e-37
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 3e-37
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 6e-37
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 149 3e-36
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 147 7e-36
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 146 2e-35
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 143 2e-34
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 6e-34
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 1e-29
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 3e-29
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 4e-29
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 123 1e-28
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 117 8e-27
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 108 6e-24
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 1e-23
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 9e-23
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 1e-22
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 4e-22
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 4e-20
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 1e-18
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 3e-16
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 76 3e-14
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 76 4e-14
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 74 1e-13
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 1e-13
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 73 3e-13
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 5e-13
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 1e-12
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 71 1e-12
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 70 2e-12
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 5e-12
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 5e-12
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 69 6e-12
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 6e-12
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 68 8e-12
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 67 2e-11
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 66 3e-11
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 4e-11
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 5e-11
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 5e-11
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 65 7e-11
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 65 7e-11
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 64 1e-10
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 1e-10
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 63 3e-10
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 4e-10
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 4e-10
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 6e-10
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 9e-10
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 9e-10
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 1e-09
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 1e-09
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 1e-09
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 60 2e-09
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 60 2e-09
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 2e-09
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 60 3e-09
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 59 3e-09
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 3e-09
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 3e-09
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 4e-09
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 4e-09
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 58 7e-09
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 8e-09
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 9e-09
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 1e-08
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 57 2e-08
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 2e-08
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 3e-08
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 3e-08
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 4e-08
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 56 4e-08
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 5e-08
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 55 5e-08
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 6e-08
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 7e-08
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 55 8e-08
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 54 1e-07
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 1e-07
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 54 2e-07
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 53 2e-07
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 3e-07
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 53 3e-07
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 3e-07
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 52 5e-07
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 52 5e-07
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 5e-07
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 6e-07
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 6e-07
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 52 7e-07
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 7e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 1e-06
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 51 1e-06
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 1e-06
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 1e-06
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 50 2e-06
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 2e-06
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 2e-06
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 50 2e-06
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 50 2e-06
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 4e-06
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 49 6e-06
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 7e-06
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 48 7e-06
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 419 bits (1077), Expect = e-117, Method: Compositional matrix adjust.
Identities = 190/316 (60%), Positives = 247/316 (78%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GYTQNG EK L R+ L + PNAVT++SILPACS GS+ QLHGFSIR +
Sbjct: 492 MISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY 551
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+DQNV+ +ALVD YSK+GAI YAE++F++ E+NSVTYTTM++ YGQHGMG RA++L+
Sbjct: 552 LDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYTTMILGYGQHGMGERAISLFL 611
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
SM SGIKPDA+ FVA+LSACSY+GL+DEGL+IFE M +++ I+PS+EHYCC+ DMLGRV
Sbjct: 612 SMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREVYNIQPSSEHYCCITDMLGRV 671
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
GRV EAYEFVK LGE+GN+ E+WGS+LG+CK HG EL + V+E+L + K +GY V
Sbjct: 672 GRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAETVSERLAKFDKGKNFSGYEV 731
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LLSN+YAEE +W++VD+VR + EKGL KE+G S +EI G VN FVSRD++HP S EIYD
Sbjct: 732 LLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIEIAGYVNCFVSRDQEHPHSSEIYD 791
Query: 301 ILDKLTMDIKDAGYKT 316
++D L D++ + T
Sbjct: 792 VIDGLAKDMRGDSFLT 807
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 114/235 (48%), Gaps = 15/235 (6%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH- 59
MI+ + QNGL+++ ++ + E + +T++++L A S+ + Q H F IR
Sbjct: 390 MISAFVQNGLDDEGLMLVYEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG 449
Query: 60 --FMDQNVYAGTALVDTYSKSGAISYAENVF--NRMPEKNSVTYTTMMMSYGQHGMGRRA 115
F N Y L+D YSKSG I ++ +F + E++ T+ +M+ Y Q+G +
Sbjct: 450 IQFEGMNSY----LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKT 505
Query: 116 LTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD 175
++ ML I+P+AV +IL ACS G VD G ++ ++ + + + + D
Sbjct: 506 FLVFRKMLEQNIRPNAVTVASILPACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVD 564
Query: 176 MLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSME 230
M + G + A + Q E +V + +++ HG +G+ LSM+
Sbjct: 565 MYSKAGAIKYAEDMFSQTKERNSV--TYTTMILGYGQHG---MGERAISLFLSMQ 614
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 25/239 (10%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK-VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
MI Y QN ++I EA+ K ++ + VT A S+ + Q HGF ++
Sbjct: 288 MIGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKN 347
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
F + + +L+ YS+ G++ + VF M E++ V++ TM+ ++ Q+G+ L L
Sbjct: 348 FRELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLV 407
Query: 120 DSMLRSGIKPDAVAFVAILSACS-----------YAGLVDEGLEIFESMVKIHKIKPSTE 168
M + G K D + A+LSA S +A L+ +G++ FE M
Sbjct: 408 YEMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQ-FEGMNSY-------- 458
Query: 169 HYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLL 227
+ DM + G + + + + G W S++ +G+ E +V K+L
Sbjct: 459 ----LIDMYSKSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKML 513
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 12/170 (7%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIP----NAVTLSSILPACSSTGSIAFATQLHGFS 56
+I G+ N L +A+L + + K P +A T SS L AC+ T ++ +H
Sbjct: 76 IIIGFICNNLPHEALLFY--SRMKKTAPFTNCDAYTYSSTLKACAETKNLKAGKAVHCHL 133
Query: 57 IRHFMDQNVYAGTALVDTY----SKSGAISY--AENVFNRMPEKNSVTYTTMMMSYGQHG 110
IR + + +L++ Y + Y VF+ M KN V + T++ Y + G
Sbjct: 134 IRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFDNMRRKNVVAWNTLISWYVKTG 193
Query: 111 MGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKI 160
A + M+R +KP V+FV + A S + + + + M+K+
Sbjct: 194 RNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKKANVFYGLMLKL 243
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 258 bits (660), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 208/327 (63%), Gaps = 3/327 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IAG QNG + +A+ RE + V PN VT+ S+LPAC + ++ HGF++R
Sbjct: 359 IIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVH 418
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ NV+ G+AL+D Y+K G I+ ++ VFN MP KN V + ++M + HG + +++++
Sbjct: 419 LLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFE 478
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
S++R+ +KPD ++F ++LSAC GL DEG + F+ M + + IKP EHY C+ ++LGR
Sbjct: 479 SLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRA 538
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G++ EAY+ +K++ + + +WG++L +C+ +L ++ AEKL +E E G +V
Sbjct: 539 GKLQEAYDLIKEMPFEPDSC-VWGALLNSCRLQNNVDLAEIAAEKLFHLEPEN--PGTYV 595
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LLSNIYA +G W VD +RN++ GL K GCS +++ V ++ D+ HPQ +I +
Sbjct: 596 LLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITE 655
Query: 301 ILDKLTMDIKDAGYKTRYNSSLNEIVE 327
+D+++ +++ +G++ + +L+++ E
Sbjct: 656 KMDEISKEMRKSGHRPNLDFALHDVEE 682
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 96/209 (45%), Gaps = 14/209 (6%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I T+ L ++I H +IP++ L ++ C+ + Q+H S
Sbjct: 87 LIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSG 146
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+D + + ++ Y + G + A VF+RM +K+ VT + ++ +Y + G + +
Sbjct: 147 LDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILS 206
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESM---------VKIHKIKPSTEHYC 171
M SGI+ + V++ ILS + +G E + +F+ + V + + PS
Sbjct: 207 EMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGD-- 264
Query: 172 CVADMLGRVGRVVEAYEFVKQLGEDGNVM 200
++ML +GR++ Y + L +D V+
Sbjct: 265 --SEML-NMGRLIHGYVIKQGLLKDKCVI 290
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/278 (20%), Positives = 119/278 (42%), Gaps = 38/278 (13%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+++G+ ++G +++A++ ++ P+ VT+SS+LP+ + + +HG+ I+
Sbjct: 223 ILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQG 282
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMP---------------------------- 92
+ ++ +A++D Y KSG + ++FN+
Sbjct: 283 LLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFE 342
Query: 93 -------EKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAG 145
E N V++T+++ Q+G AL L+ M +G+KP+ V ++L AC
Sbjct: 343 LFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIA 402
Query: 146 LVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGS 205
+ G V++H + + + DM + GR + + V + N++ W S
Sbjct: 403 ALGHGRSTHGFAVRVHLLD-NVHVGSALIDMYAKCGR-INLSQIVFNMMPTKNLV-CWNS 459
Query: 206 ILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLS 243
++ HG + + E L+ + + LLS
Sbjct: 460 LMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLS 497
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 258 bits (658), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 131/328 (39%), Positives = 199/328 (60%), Gaps = 5/328 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GYTQNGL E AI RE + PN VT++ IL AC+ G+++ +H
Sbjct: 391 MISGYTQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTD 450
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ ++Y TAL+ Y+K G+I+ A +F+ M +KN VT+ TM+ YG HG G+ AL ++
Sbjct: 451 FESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFY 510
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
ML SGI P V F+ +L ACS+AGLV EG EIF SM+ + +PS +HY C+ D+LGR
Sbjct: 511 EMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRA 570
Query: 181 GRVVEAYEFVKQLG-EDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G + A +F++ + E G+ +W ++LGAC+ H L + V+EKL ++ + GYH
Sbjct: 571 GHLQRALQFIEAMSIEPGS--SVWETLLGACRIHKDTNLARTVSEKLFELDPDN--VGYH 626
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
VLLSNI++ + + VR ++ L K G +L+EIG + F S D+ HPQ EIY
Sbjct: 627 VLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIY 686
Query: 300 DILDKLTMDIKDAGYKTRYNSSLNEIVE 327
+ L+KL +++AGY+ +L+++ E
Sbjct: 687 EKLEKLEGKMREAGYQPETELALHDVEE 714
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 6/214 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI GYT NG E ++ +E +L + TL S++P +G + +HG+ ++
Sbjct: 293 MIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPV---SGHLMLIYAIHGYCLKSN 349
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ TAL YSK I A +F+ PEK+ ++ M+ Y Q+G+ A++L+
Sbjct: 350 FLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFR 409
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M +S P+ V ILSAC+ G + G + + +V+ + S + M +
Sbjct: 410 EMQKSEFSPNPVTITCILSACAQLGALSLGKWVHD-LVRSTDFESSIYVSTALIGMYAKC 468
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
G + EA + + V W +++ HG
Sbjct: 469 GSIAEARRLFDLMTKKNEV--TWNTMISGYGLHG 500
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 66/148 (44%), Gaps = 1/148 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIP-NAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
MI+GY +N + ++I R+ + + TL ILPA + + Q+H + +
Sbjct: 191 MISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKT 250
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ Y T + YSK G I +F + + V Y M+ Y +G +L+L+
Sbjct: 251 GCYSHDYVLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLF 310
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLV 147
++ SG + + V+++ + L+
Sbjct: 311 KELMLSGARLRSSTLVSLVPVSGHLMLI 338
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 1/127 (0%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
PN+ T + + A S +HG ++ D + G+ +V Y K + A V
Sbjct: 117 PNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKV 176
Query: 88 FNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSML-RSGIKPDAVAFVAILSACSYAGL 146
F+RMPEK+++ + TM+ Y ++ M ++ ++ ++ S + D + IL A +
Sbjct: 177 FDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQE 236
Query: 147 VDEGLEI 153
+ G++I
Sbjct: 237 LRLGMQI 243
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 257 bits (656), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 126/338 (37%), Positives = 208/338 (61%), Gaps = 13/338 (3%)
Query: 1 MIAGYTQNGLNEKAILTLR--EALLHKVI---------PNAVTLSSILPACSSTGSIAFA 49
MI GY + +E A+L L + L KV PN++TL +ILP+C++ ++A
Sbjct: 477 MITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKG 536
Query: 50 TQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQH 109
++H ++I++ + +V G+ALVD Y+K G + + VF+++P+KN +T+ ++M+YG H
Sbjct: 537 KEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMH 596
Query: 110 GMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEH 169
G G+ A+ L M+ G+KP+ V F+++ +ACS++G+VDEGL IF M + ++PS++H
Sbjct: 597 GNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDH 656
Query: 170 YCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSM 229
Y CV D+LGR GR+ EAY+ + + D N W S+LGA + H E+G++ A+ L+ +
Sbjct: 657 YACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQL 716
Query: 230 ETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRD 289
E VA ++VLL+NIY+ G W+ VR + E+G+ KE GCS +E G V+ FV+ D
Sbjct: 717 EPN--VASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGD 774
Query: 290 EKHPQSGEIYDILDKLTMDIKDAGYKTRYNSSLNEIVE 327
HPQS ++ L+ L ++ GY + L+ + E
Sbjct: 775 SSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEE 812
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 113/228 (49%), Gaps = 19/228 (8%)
Query: 1 MIAGYTQNGLNEKAILT---LREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSI 57
MIAGY+QN +++A+L + E+ ++ N+ T++ ++PAC +G+ + +HGF +
Sbjct: 375 MIAGYSQNEHDKEALLLFIGMEESA--GLLANSTTMAGVVPACVRSGAFSRKEAIHGFVV 432
Query: 58 RHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
+ +D++ + L+D YS+ G I A +F +M +++ VT+ TM+ Y AL
Sbjct: 433 KRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALL 492
Query: 118 LYDSML-----------RSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPS 166
L M R +KP+++ + IL +C+ + +G EI +K + +
Sbjct: 493 LLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIK-NNLATD 551
Query: 167 TEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
+ DM + G + + + Q+ + NV+ W I+ A HG
Sbjct: 552 VAVGSALVDMYAKCGCLQMSRKVFDQIPQK-NVI-TWNVIIMAYGMHG 597
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH- 59
+++ QN +A+ LRE +L V P+ T+SS+LPACS + +LH +++++
Sbjct: 273 VLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNG 332
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+D+N + G+ALVD Y + VF+ M ++ + M+ Y Q+ + AL L+
Sbjct: 333 SLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLF 392
Query: 120 DSMLRS-GIKPDAVAFVAILSACSYAG 145
M S G+ ++ ++ AC +G
Sbjct: 393 IGMEESAGLLANSTTMAGVVPACVRSG 419
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 108/232 (46%), Gaps = 9/232 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHG--FSIR 58
++ ++ L +A+LT + ++ + P+ ++L A + + Q+H +
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+ +D A T LV+ Y K G VF+R+ E+N V++ +++ S AL
Sbjct: 128 YGVDSVTVANT-LVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMALEA 186
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESM--VKIHKIKPSTEHYCCVADM 176
+ ML ++P + V++++ACS + EGL + + + + K + ++ + M
Sbjct: 187 FRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLMMGKQVHAYGLRKGELNSFIINTLVAM 245
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGA-CKNHGYFELGKVVAEKLL 227
G++G++ + + G G + W ++L + C+N E + + E +L
Sbjct: 246 YGKLGKLASSKVLLGSFG--GRDLVTWNTVLSSLCQNEQLLEALEYLREMVL 295
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 70/145 (48%), Gaps = 4/145 (2%)
Query: 12 EKAILTLREALLHKVIPNAVTLSSILPACSSTG---SIAFATQLHGFSIRHFMDQNVYAG 68
E A+ R L V P++ TL S++ ACS+ + Q+H + +R + N +
Sbjct: 181 EMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRK-GELNSFII 239
Query: 69 TALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIK 128
LV Y K G ++ ++ + ++ VT+ T++ S Q+ AL M+ G++
Sbjct: 240 NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVE 299
Query: 129 PDAVAFVAILSACSYAGLVDEGLEI 153
PD ++L ACS+ ++ G E+
Sbjct: 300 PDEFTISSVLPACSHLEMLRTGKEL 324
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 253 bits (646), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/327 (38%), Positives = 198/327 (60%), Gaps = 3/327 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI Y +N + +A+ P+AV+++S+LPAC T +++ ++HG+ R
Sbjct: 280 MIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKK 339
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ N+ AL+D Y+K G + A +VF M ++ V++T M+ +YG G G A+ L+
Sbjct: 340 LIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFS 399
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
+ SG+ PD++AFV L+ACS+AGL++EG F+ M +KI P EH C+ D+LGR
Sbjct: 400 KLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRA 459
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G+V EAY F++ + + N +WG++LGAC+ H ++G + A+KL + E+ +GY+V
Sbjct: 460 GKVKEAYRFIQDMSMEPN-ERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQ--SGYYV 516
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LLSNIYA+ G WE V +RN + KGL K G S VE+ +++ F+ D HPQS EIY
Sbjct: 517 LLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYR 576
Query: 301 ILDKLTMDIKDAGYKTRYNSSLNEIVE 327
LD L +K+ GY S+L+++ E
Sbjct: 577 ELDVLVKKMKELGYVPDSESALHDVEE 603
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 102/258 (39%), Gaps = 53/258 (20%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI Y NG + + V P+ T +L ACS +G+I ++HG + +
Sbjct: 111 MIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVG 170
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ ++ G LV Y K G +S A V + M ++ V++ ++++ Y Q+ AL +
Sbjct: 171 LSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCR 230
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M I DA ++L A S +TE+ V DM ++
Sbjct: 231 EMESVKISHDAGTMASLLPAVS---------------------NTTTENVMYVKDMFFKM 269
Query: 181 GR------------------VVEAYEFVKQLGEDG---NVMEIWGSILGAC--------- 210
G+ VEA E ++ DG + + I S+L AC
Sbjct: 270 GKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSI-TSVLPACGDTSALSLG 328
Query: 211 -KNHGYFELGKVVAEKLL 227
K HGY E K++ LL
Sbjct: 329 KKIHGYIERKKLIPNLLL 346
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%)
Query: 64 NVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSML 123
N G L+ Y+ ++ A VF+ +PE+N + M+ SY +G + ++ +M
Sbjct: 73 NSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMC 132
Query: 124 RSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKI 160
++PD F +L ACS +G + G +I S K+
Sbjct: 133 GCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKV 169
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 121/327 (37%), Positives = 197/327 (60%), Gaps = 3/327 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++AGY QNG +A+ R+ + KV P AV SS++PAC+ ++ QLHG+ +R
Sbjct: 314 LVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGG 373
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
N++ +ALVD YSK G I A +F+RM + V++T ++M + HG G A++L++
Sbjct: 374 FGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFE 433
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M R G+KP+ VAFVA+L+ACS+ GLVDE F SM K++ + EHY VAD+LGR
Sbjct: 434 EMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRA 493
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G++ EAY F+ ++ + +W ++L +C H EL + VAEK+ ++++E G +V
Sbjct: 494 GKLEEAYNFISKMCVEPT-GSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSEN--MGAYV 550
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
L+ N+YA G W+ + ++R ++ +KGL K+ CS +E+ + FVS D HP +I +
Sbjct: 551 LMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINE 610
Query: 301 ILDKLTMDIKDAGYKTRYNSSLNEIVE 327
L + ++ GY + L+++ E
Sbjct: 611 FLKAVMEQMEKEGYVADTSGVLHDVDE 637
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 95/153 (62%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IAGY Q+G+ E A+ +RE + P++ TLSS+LP S + ++HG+ IR
Sbjct: 213 IIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKG 272
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+D +VY G++LVD Y+KS I +E VF+R+ ++ +++ +++ Y Q+G AL L+
Sbjct: 273 IDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFR 332
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEI 153
M+ + +KP AVAF +++ AC++ + G ++
Sbjct: 333 QMVTAKVKPGAVAFSSVIPACAHLATLHLGKQL 365
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 77/189 (40%), Gaps = 36/189 (19%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I +T L KA+ + E P+ S+L +C+ + F +HGF +R
Sbjct: 76 VIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG 135
Query: 61 MDQNVYAGTALVDTYSK-----------------------SG-------------AISYA 84
MD ++Y G AL++ Y+K SG I
Sbjct: 136 MDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSV 195
Query: 85 ENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYA 144
VF MP K+ V+Y T++ Y Q GM AL + M + +KPD+ ++L S
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEY 255
Query: 145 GLVDEGLEI 153
V +G EI
Sbjct: 256 VDVIKGKEI 264
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 242 bits (617), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 132/330 (40%), Positives = 198/330 (60%), Gaps = 5/330 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLH-KVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
MI GY Q+G A++ ++ L K P+ +T+ + L ACS G++ +H F
Sbjct: 229 MIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSS 288
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ NV T L+D YSK G++ A VFN P K+ V + M+ Y HG + AL L+
Sbjct: 289 RIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLF 348
Query: 120 DSMLR-SGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+ M +G++P + F+ L AC++AGLV+EG+ IFESM + + IKP EHY C+ +LG
Sbjct: 349 NEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLG 408
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
R G++ AYE +K + D + + +W S+LG+CK HG F LGK +AE L+ + + +G
Sbjct: 409 RAGQLKRAYETIKNMNMDADSV-LWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKN--SGI 465
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEI 298
+VLLSNIYA G++E V +VRN + EKG+ KE G S +EI V+ F + D +H +S EI
Sbjct: 466 YVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEI 525
Query: 299 YDILDKLTMDIKDAGYKTRYNSSLNEIVET 328
Y +L K++ IK GY N+ L ++ ET
Sbjct: 526 YTMLRKISERIKSHGYVPNTNTVLQDLEET 555
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 104/240 (43%), Gaps = 39/240 (16%)
Query: 8 NGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYA 67
NGL ++A L + L ++ PN T SS+L +CS+ +H ++ + + Y
Sbjct: 108 NGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFGLGIDPYV 163
Query: 68 GTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMS---------------------- 105
T LVD Y+K G + A+ VF+RMPE++ V+ T M+
Sbjct: 164 ATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDI 223
Query: 106 ---------YGQHGMGRRALTLYDSMLRSG-IKPDAVAFVAILSACSYAGLVDEGLEIFE 155
Y QHG AL L+ +L G KPD + VA LSACS G ++ G I
Sbjct: 224 VSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWI-H 282
Query: 156 SMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGY 215
VK +I+ + + + DM + G + EA V W +++ HGY
Sbjct: 283 VFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVA--WNAMIAGYAMHGY 340
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 241 bits (616), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 121/330 (36%), Positives = 201/330 (60%), Gaps = 5/330 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+++G+ QNGL ++AI + P++ T S+L AC+ TG+++ + +H + I
Sbjct: 179 LVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEG 238
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+D NV GTAL++ YS+ G + A VF++M E N +T M+ +YG HG G++A+ L++
Sbjct: 239 LDLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFN 298
Query: 121 SMLRS-GIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M G P+ V FVA+LSAC++AGLV+EG +++ M K +++ P EH+ C+ DMLGR
Sbjct: 299 KMEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGR 358
Query: 180 VGRVVEAYEFVKQLGEDGNVM--EIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAG 237
G + EAY+F+ QL G +W ++LGACK H ++LG +A++L+++E + G
Sbjct: 359 AGFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDN--PG 416
Query: 238 YHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGE 297
+HV+LSNIYA G+ + V +R+ + L K++G S++E+ F DE H ++GE
Sbjct: 417 HHVMLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIEVENKTYMFSMGDESHQETGE 476
Query: 298 IYDILDKLTMDIKDAGYKTRYNSSLNEIVE 327
IY L+ L K+ GY ++++ E
Sbjct: 477 IYRYLETLISRCKEIGYAPVSEEVMHQVEE 506
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 106/214 (49%), Gaps = 6/214 (2%)
Query: 19 REALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKS 78
R L V P+ T +S++ +C+ ++ +H ++ + Y ALV YSK
Sbjct: 96 RRMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKC 155
Query: 79 GAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAIL 138
G + A VF+RMPEK+ V + +++ + Q+G+ A+ ++ M SG +PD+ FV++L
Sbjct: 156 GDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATFVSLL 215
Query: 139 SACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGN 198
SAC+ G V G + + ++ + + + + ++ R G V +A E ++ E
Sbjct: 216 SACAQTGAVSLGSWVHQYIIS-EGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKETN- 273
Query: 199 VMEIWGSILGACKNHGYFELGKVVAEKLLSMETE 232
+ W +++ A HGY G+ E ME +
Sbjct: 274 -VAAWTAMISAYGTHGY---GQQAVELFNKMEDD 303
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 239 bits (609), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/324 (38%), Positives = 201/324 (62%), Gaps = 12/324 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLH--KVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
+I GY++N +A L+L LL + P+ T++ +LPAC+S + ++HG+ +R
Sbjct: 469 IIGGYSKNCYANEA-LSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMR 527
Query: 59 --HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRAL 116
+F D++V +LVD Y+K GA+ A +F+ + K+ V++T M+ YG HG G+ A+
Sbjct: 528 NGYFSDRHV--ANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAI 585
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
L++ M ++GI+ D ++FV++L ACS++GLVDEG F M KI+P+ EHY C+ DM
Sbjct: 586 ALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDM 645
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVA 236
L R G +++AY F++ + + IWG++L C+ H +L + VAEK+ +E E
Sbjct: 646 LARTGDLIKAYRFIENMPIPPDAT-IWGALLCGCRIHHDVKLAEKVAEKVFELEPEN--T 702
Query: 237 GYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSG 296
GY+VL++NIYAE +WE V R+R +I ++GL K GCS +EI G VN FV+ D +P++
Sbjct: 703 GYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDSSNPETE 762
Query: 297 EIYDILDKLTMDIKDAGYK--TRY 318
I L K+ + + GY T+Y
Sbjct: 763 NIEAFLRKVRARMIEEGYSPLTKY 786
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 7/217 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GY NGL EK + + L+ + + T+ S+ C+ + I+ +H ++
Sbjct: 267 IINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKAC 326
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ L+D YSK G + A+ VF M +++ V+YT+M+ Y + G+ A+ L++
Sbjct: 327 FSREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFE 386
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M GI PD A+L+ C+ L+DEG + E +K + + + DM +
Sbjct: 387 EMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHE-WIKENDLGFDIFVSNALMDMYAKC 445
Query: 181 GRVVEAYEFVKQLGEDGNVMEI--WGSILGACKNHGY 215
G + EA ++ V +I W +I+G + Y
Sbjct: 446 GSMQEAELVFSEM----RVKDIISWNTIIGGYSKNCY 478
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 80/154 (51%), Gaps = 1/154 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MIAGY + GL +A+ E + P+ T++++L C+ + ++H + +
Sbjct: 368 MIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEND 427
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ +++ AL+D Y+K G++ AE VF+ M K+ +++ T++ Y ++ AL+L++
Sbjct: 428 LGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFN 487
Query: 121 SMLRSG-IKPDAVAFVAILSACSYAGLVDEGLEI 153
+L PD +L AC+ D+G EI
Sbjct: 488 LLLEEKRFSPDERTVACVLPACASLSAFDKGREI 521
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 87/180 (48%), Gaps = 8/180 (4%)
Query: 22 LLHKVIPNAVTLSSILPAC-----SSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYS 76
L K++ + V + S +C SS S+ QLHGF ++ + G +LV Y
Sbjct: 182 LFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVAFYL 241
Query: 77 KSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVA 136
K+ + A VF+ M E++ +++ +++ Y +G+ + L+++ ML SGI+ D V+
Sbjct: 242 KNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVS 301
Query: 137 ILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYC-CVADMLGRVGRVVEAYEFVKQLGE 195
+ + C+ + L+ G + + + + +C + DM + G + A +++ +
Sbjct: 302 VFAGCADSRLISLGRAVHS--IGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD 359
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 237 bits (604), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/313 (38%), Positives = 201/313 (64%), Gaps = 5/313 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALL-HKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+I+G+T NG+ ++I LL + P+A+ + +L +CS G + A H + I++
Sbjct: 336 LISGFTLNGMAHRSIEEFSIMLLENNTRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKY 395
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
D N + G +LV+ YS+ G++ A VFN + K++V +T+++ YG HG G +AL +
Sbjct: 396 GFDSNPFIGASLVELYSRCGSLGNASKVFNGIALKDTVVWTSLITGYGIHGKGTKALETF 455
Query: 120 DSMLRSG-IKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+ M++S +KP+ V F++ILSACS+AGL+ EGL IF+ MV +++ P+ EHY + D+LG
Sbjct: 456 NHMVKSSEVKPNEVTFLSILSACSHAGLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLG 515
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
RVG + A E K++ +I G++LGAC+ H E+ + VA+KL +E+ AGY
Sbjct: 516 RVGDLDTAIEITKRM-PFSPTPQILGTLLGACRIHQNGEMAETVAKKLFELESNH--AGY 572
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEI 298
++L+SN+Y +GEWENV+++RN + ++G+ K + SL+EI V+ FV+ DE HP+ +
Sbjct: 573 YMLMSNVYGVKGEWENVEKLRNSVKQRGIKKGLAESLIEIRRKVHRFVADDELHPEKEPV 632
Query: 299 YDILDKLTMDIKD 311
Y +L +L + +K+
Sbjct: 633 YGLLKELDLHMKE 645
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 103/215 (47%), Gaps = 4/215 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IA Y QNG +A+L + + PN T+ +L AC++ + + H +IR
Sbjct: 235 VIACYVQNGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKG 294
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ V TALVD Y K + A VF+R+P K+ V++ ++ + +GM R++ +
Sbjct: 295 LETEVKVSTALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFS 354
Query: 121 SM-LRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M L + +PDA+ V +L +CS G +++ + F S V + + + ++ R
Sbjct: 355 IMLLENNTRPDAILMVKVLGSCSELGFLEQA-KCFHSYVIKYGFDSNPFIGASLVELYSR 413
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
G + A + + V +W S++ HG
Sbjct: 414 CGSLGNASKVFNGIALKDTV--VWTSLITGYGIHG 446
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 89/160 (55%), Gaps = 1/160 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALL-HKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
M++G+ +NG +A+ R ++ V P+ VTL +++ AC+ + +HGF IR
Sbjct: 133 MVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVIRR 192
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
++ +L++ Y+KS A A N+F + EK+ ++++T++ Y Q+G AL ++
Sbjct: 193 GFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALLVF 252
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
+ M+ G +P+ + +L AC+ A +++G + E ++
Sbjct: 253 NDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIR 292
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 63/117 (53%), Gaps = 2/117 (1%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHF-MDQNVYAGTALVDTYSKSGAISYAEN 86
P+ TL L AC + + +HGF + + ++Y G++L+ Y K G + A
Sbjct: 58 PDNFTLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALR 117
Query: 87 VFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSM-LRSGIKPDAVAFVAILSACS 142
+F+ + + + VT+++M+ + ++G +A+ + M + S + PD V + ++SAC+
Sbjct: 118 MFDELEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACT 174
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 118/324 (36%), Positives = 201/324 (62%), Gaps = 4/324 (1%)
Query: 5 YTQNGLNEKAILTLREALLHKVIP-NAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQ 63
Y Q+G++ +A R + +KV+ NA+TLS++L A S +G++ +H IR ++
Sbjct: 261 YAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED 320
Query: 64 NVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSML 123
+V GT+++D Y K G + A F+RM KN ++T M+ YG HG +AL L+ +M+
Sbjct: 321 DVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMI 380
Query: 124 RSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRV 183
SG++P+ + FV++L+ACS+AGL EG F +M ++P EHY C+ D+LGR G +
Sbjct: 381 DSGVRPNYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFL 440
Query: 184 VEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLS 243
+AY+ ++++ + + IW S+L AC+ H EL ++ +L +++ GY++LLS
Sbjct: 441 QKAYDLIQRMKMKPDSI-IWSSLLAACRIHKNVELAEISVARLFELDSSN--CGYYMLLS 497
Query: 244 NIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYDILD 303
+IYA+ G W++V+RVR + +GL K G SL+E+ G V+ F+ DE+HPQ +IY+ L
Sbjct: 498 HIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLA 557
Query: 304 KLTMDIKDAGYKTRYNSSLNEIVE 327
+L + +AGY + +S +++ E
Sbjct: 558 ELNRKLLEAGYVSNTSSVCHDVDE 581
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 112/224 (50%), Gaps = 12/224 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK------VIPNAVTLSSILPACSSTGSIAFATQLHG 54
MI GY NG A+ ++ L+ + + +++ L S++ ACS + +H
Sbjct: 148 MIRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHS 207
Query: 55 FSIRHFMDQNVYAGTALVDTYSK--SGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMG 112
F I+ D+ V G L+D Y+K G ++ A +F+++ +K+ V+Y ++M Y Q GM
Sbjct: 208 FVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMS 267
Query: 113 RRALTLYDSMLRSGIKP-DAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYC 171
A ++ ++++ + +A+ +L A S++G + G I + ++++ ++
Sbjct: 268 NEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRM-GLEDDVIVGT 326
Query: 172 CVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGY 215
+ DM + GRV A + ++ ++ NV W +++ HG+
Sbjct: 327 SIIDMYCKCGRVETARKAFDRM-KNKNVRS-WTAMIAGYGMHGH 368
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 6/148 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IA ++G + +A+L + P + + ACSS I Q H +
Sbjct: 47 VIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFG 106
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+++ +AL+ YS G + A VF+ +P++N V++T+M+ Y +G A++L+
Sbjct: 107 YQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFK 166
Query: 121 SML------RSGIKPDAVAFVAILSACS 142
+L + D++ V+++SACS
Sbjct: 167 DLLVDENDDDDAMFLDSMGLVSVISACS 194
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 235 bits (600), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/329 (38%), Positives = 191/329 (58%), Gaps = 10/329 (3%)
Query: 1 MIAGYTQNGLNEKAI----LTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFS 56
+I+GY QNG +AI + E ++ N T S+LPACS G++ +LHG
Sbjct: 421 IISGYAQNGFASEAIEMYNIMEEEG---EIAANQGTWVSVLPACSQAGALRQGMKLHGRL 477
Query: 57 IRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRAL 116
+++ + +V+ T+L D Y K G + A ++F ++P NSV + T++ +G HG G +A+
Sbjct: 478 LKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAV 537
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
L+ ML G+KPD + FV +LSACS++GLVDEG FE M + I PS +HY C+ DM
Sbjct: 538 MLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDM 597
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVA 236
GR G++ A +F+K + + IWG++L AC+ HG +LGK+ +E L +E E
Sbjct: 598 YGRAGQLETALKFIKSMSLQPDA-SIWGALLSACRVHGNVDLGKIASEHLFEVEPEH--V 654
Query: 237 GYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSG 296
GYHVLLSN+YA G+WE VD +R+ KGL K G S +E+ V F + ++ HP
Sbjct: 655 GYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFYTGNQTHPMYE 714
Query: 297 EIYDILDKLTMDIKDAGYKTRYNSSLNEI 325
E+Y L L +K GY + L ++
Sbjct: 715 EMYRELTALQAKLKMIGYVPDHRFVLQDV 743
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 127/258 (49%), Gaps = 9/258 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH- 59
+I Y N +AI +E L ++ P+ +TL S+ S G I + GF++R
Sbjct: 319 IIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKG 378
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ +++ G A+V Y+K G + A VFN +P + +++ T++ Y Q+G A+ +Y
Sbjct: 379 WFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMY 438
Query: 120 DSMLRSG-IKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+ M G I + +V++L ACS AG + +G+++ ++K + + +ADM G
Sbjct: 439 NIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLK-NGLYLDVFVVTSLADMYG 497
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
+ GR+ +A Q+ +V W +++ HG+ E ++ +++L + +
Sbjct: 498 KCGRLEDALSLFYQIPRVNSVP--WNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITF 555
Query: 239 HVLLSNI----YAEEGEW 252
LLS +EG+W
Sbjct: 556 VTLLSACSHSGLVDEGQW 573
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 115/263 (43%), Gaps = 42/263 (15%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GY Q+G N K LTL L ++VT+ S+L AC+ G +H +SI+H
Sbjct: 222 MISGYCQSG-NAKEALTLSNGLRAM---DSVTVVSLLSACTEAGDFNRGVTIHSYSIKHG 277
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ ++ L+D Y++ G + + VF+RM ++ +++ +++ +Y + RA++L+
Sbjct: 278 LESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQ 337
Query: 121 SMLRSGIKPDAVAFVAILS---------ACS-------------------------YA-- 144
M S I+PD + +++ S AC YA
Sbjct: 338 EMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKL 397
Query: 145 GLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWG 204
GLVD +F + I +T + G +E Y +++ GE W
Sbjct: 398 GLVDSARAVFNWLPNTDVISWNTIISGYAQN--GFASEAIEMYNIMEEEGEIAANQGTWV 455
Query: 205 SILGACKNHGYFELGKVVAEKLL 227
S+L AC G G + +LL
Sbjct: 456 SVLPACSQAGALRQGMKLHGRLL 478
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 83/160 (51%), Gaps = 8/160 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK-VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
MI+GY + G + + I +L + P+ T S+L AC + + ++H +++
Sbjct: 123 MISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRT---VIDGNKIHCLALKF 179
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+VY +L+ YS+ A+ A +F+ MP ++ ++ M+ Y Q G + ALTL
Sbjct: 180 GFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAKEALTLS 239
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
+ LR+ D+V V++LSAC+ AG + G+ I +K
Sbjct: 240 NG-LRA---MDSVTVVSLLSACTEAGDFNRGVTIHSYSIK 275
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 235 bits (600), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 125/331 (37%), Positives = 191/331 (57%), Gaps = 12/331 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLH--KVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
MI GY+Q+G KA+ L E + PNA T+S L AC+S ++ Q+H +++R
Sbjct: 446 MIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALR 505
Query: 59 HFMDQN---VYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRA 115
+ QN ++ L+D Y+K G+IS A VF+ M KN VT+T++M YG HG G A
Sbjct: 506 N--QQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEA 563
Query: 116 LTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD 175
L ++D M R G K D V + +L ACS++G++D+G+E F M + + P EHY C+ D
Sbjct: 564 LGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVD 623
Query: 176 MLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRV 235
+LGR GR+ A ++++ + + +W + L C+ HG ELG+ AEK+ + +
Sbjct: 624 LLGRAGRLNAALRLIEEMPMEPPPV-VWVAFLSCCRIHGKVELGEYAAEKITELASNHD- 681
Query: 236 AGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVE-IGGLVNYFVSRDEKHPQ 294
G + LLSN+YA G W++V R+R+ + KG+ K GCS VE I G +FV D+ HP
Sbjct: 682 -GSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVG-DKTHPH 739
Query: 295 SGEIYDILDKLTMDIKDAGYKTRYNSSLNEI 325
+ EIY +L IKD GY +L+++
Sbjct: 740 AKEIYQVLLDHMQRIKDIGYVPETGFALHDV 770
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 41/228 (17%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
P+ +TL ++LP C+S G+ + QLH F++ M QN++ G LVD Y+K G + A V
Sbjct: 227 PDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTV 286
Query: 88 FNRMPEKNSVTYTTMMM-----------------------------------SYGQHGMG 112
F+ M K+ V++ M+ Y Q G+G
Sbjct: 287 FSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLG 346
Query: 113 RRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK----IHKIKPSTE 168
AL + ML SGIKP+ V +++LS C+ G + G EI +K + K E
Sbjct: 347 YEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDE 406
Query: 169 HYCC--VADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
+ + DM + +V A L + W ++G HG
Sbjct: 407 NMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHG 454
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 118/261 (45%), Gaps = 24/261 (9%)
Query: 2 IAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFM 61
I+GY Q GL +A+ R+ L + PN VTL S+L C+S G++ ++H ++I++ +
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396
Query: 62 D--QNVYAG-----TALVDTYSKSGAISYAENVFNRMP--EKNSVTYTTMMMSYGQHGMG 112
D +N + L+D Y+K + A +F+ + E++ VT+T M+ Y QHG
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 113 RRALTLYDSMLRSGI--KPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHY 170
+AL L M +P+A L AC+ + G +I ++ +
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVS 516
Query: 171 CCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSME 230
C+ DM + G + +A + V W S++ HGY E+ L +
Sbjct: 517 NCLIDMYAKCGSISDARLVFDNMMAKNEV--TWTSLMTGYGMHGY-------GEEALGIF 567
Query: 231 TEKRVAGYHV----LLSNIYA 247
E R G+ + LL +YA
Sbjct: 568 DEMRRIGFKLDGVTLLVVLYA 588
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 106/253 (41%), Gaps = 9/253 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKV--IPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
+I Y NG K + L+H + P+ T + AC S+ H S+
Sbjct: 98 LIRSYGDNGCANKCLYLF--GLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLV 155
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
NV+ G ALV YS+ ++S A VF+ M + V++ +++ SY + G + AL +
Sbjct: 156 TGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEM 215
Query: 119 YDSMLRS-GIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADML 177
+ M G +PD + V +L C+ G G ++ V I+ C V DM
Sbjct: 216 FSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLV-DMY 274
Query: 178 GRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAG 237
+ G + EA + V W +++ G FE + EK+ + + V
Sbjct: 275 AKCGMMDEANTVFSNMSVKDVVS--WNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVT 332
Query: 238 YHVLLSNIYAEEG 250
+ +S YA+ G
Sbjct: 333 WSAAISG-YAQRG 344
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 234 bits (597), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 120/314 (38%), Positives = 184/314 (58%), Gaps = 3/314 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+ G +N E+A L E ++ +A T +S+L ++ GSI Q+H ++
Sbjct: 445 FLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLG 504
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ N AL+ YSK G+I A VFN M +N +++T+M+ + +HG R L ++
Sbjct: 505 LSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFN 564
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+ G+KP+ V +VAILSACS+ GLV EG F SM + HKIKP EHY C+ D+L R
Sbjct: 565 QMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRA 624
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + +A+EF+ + +V+ +W + LGAC+ H ELGK+ A K+L ++ + A ++
Sbjct: 625 GLLTDAFEFINTMPFQADVL-VWRTFLGACRVHSNTELGKLAARKILELDPNEPAA--YI 681
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LSNIYA G+WE +R ++ E+ L KE GCS +E+G ++ F D HP + +IYD
Sbjct: 682 QLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYD 741
Query: 301 ILDKLTMDIKDAGY 314
LD+L +IK GY
Sbjct: 742 ELDRLITEIKRCGY 755
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 126/296 (42%), Gaps = 15/296 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR-- 58
M+A Y NG AI E L ++PN ++++ ACS++ + GF ++
Sbjct: 137 MMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTG 196
Query: 59 HFMDQNVYAGTALVDTYSK-SGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
HF + +V G +L+D + K + A VF++M E N VT+T M+ Q G R A+
Sbjct: 197 HF-ESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIR 255
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADML 177
+ M+ SG + D ++ SAC+ + G ++ ++ + + C + DM
Sbjct: 256 FFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVD---DVECSLVDMY 312
Query: 178 GRV---GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKR 234
+ G V + + ++ ED +VM I G KN L M T+
Sbjct: 313 AKCSADGSVDDCRKVFDRM-EDHSVMSWTALITGYMKN---CNLATEAINLFSEMITQGH 368
Query: 235 VAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDE 290
V H S+ + G + RV Q+ + + + + +++ FV D
Sbjct: 369 VEPNHFTFSSAFKACGNLSD-PRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDR 423
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 119/259 (45%), Gaps = 17/259 (6%)
Query: 29 NAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVF 88
++VT SS+L +C +H I ++ + +L+ YSKSG + AE+VF
Sbjct: 61 DSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVF 120
Query: 89 ---NRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAG 145
R +++ V+++ MM YG +G A+ ++ L G+ P+ + A++ ACS +
Sbjct: 121 ETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSD 180
Query: 146 LVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVE-AYEFVKQLGEDGNVMEIWG 204
V G ++K + C + DM + E AY+ ++ E V W
Sbjct: 181 FVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVV--TWT 238
Query: 205 SILGACKNHGY-FELGKVVAEKLLS-METEKRVAGYHVLLSNIYAEEGEWENVD---RVR 259
++ C G+ E + + +LS E++K LS++++ E EN+ ++
Sbjct: 239 LMITRCMQMGFPREAIRFFLDMVLSGFESDK------FTLSSVFSACAELENLSLGKQLH 292
Query: 260 NQITEKGLHKEMGCSLVEI 278
+ GL ++ CSLV++
Sbjct: 293 SWAIRSGLVDDVECSLVDM 311
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 92/219 (42%), Gaps = 9/219 (4%)
Query: 1 MIAGYTQN-GLNEKAILTLREALLH-KVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
+I GY +N L +AI E + V PN T SS AC + Q+ G + +
Sbjct: 342 LITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFK 401
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+ N +++ + KS + A+ F + EKN V+Y T + ++ +A L
Sbjct: 402 RGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKL 461
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVA--DM 176
+ + A F ++LS + G + +G +I +V K+ S C A M
Sbjct: 462 LSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVV---KLGLSCNQPVCNALISM 518
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGY 215
+ G + A V E+ NV+ W S++ HG+
Sbjct: 519 YSKCGSIDTASR-VFNFMENRNVIS-WTSMITGFAKHGF 555
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 234 bits (597), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 197/325 (60%), Gaps = 4/325 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GY +NG +AI E + V P+ ++++S + AC+ GS+ A ++ + R
Sbjct: 294 MISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSD 353
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+V+ +AL+D ++K G++ A VF+R +++ V ++ M++ YG HG R A++LY
Sbjct: 354 YRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYR 413
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
+M R G+ P+ V F+ +L AC+++G+V EG F M HKI P +HY CV D+LGR
Sbjct: 414 AMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRA 472
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + +AYE +K + V +WG++L ACK H + ELG+ A++L S++ G++V
Sbjct: 473 GHLDQAYEVIKCMPVQPGVT-VWGALLSACKKHRHVELGEYAAQQLFSIDPSN--TGHYV 529
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LSN+YA W+ V VR ++ EKGL+K++GCS VE+ G + F D+ HP+ EI
Sbjct: 530 QLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIER 589
Query: 301 ILDKLTMDIKDAGYKTRYNSSLNEI 325
++ + +K+ G+ ++SL+++
Sbjct: 590 QVEWIESRLKEGGFVANKDASLHDL 614
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 105/218 (48%), Gaps = 7/218 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GY++N + A+L L +V P++ T +L ACS + +H R
Sbjct: 90 IIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLG 149
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFN--RMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
D +V+ L+ Y+K + A VF +PE+ V++T ++ +Y Q+G AL +
Sbjct: 150 FDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEI 209
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIH-KIKPSTEHYCCVADML 177
+ M + +KPD VA V++L+A + + +G I S+VK+ +I+P + M
Sbjct: 210 FSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL--LISLNTMY 267
Query: 178 GRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGY 215
+ G+V A ++ ++ W +++ +GY
Sbjct: 268 AKCGQVATAKILFDKMKSPNLIL--WNAMISGYAKNGY 303
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 78/155 (50%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+++ Y QNG +A+ + V P+ V L S+L A + + +H ++
Sbjct: 193 IVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMG 252
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ +L Y+K G ++ A+ +F++M N + + M+ Y ++G R A+ ++
Sbjct: 253 LEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFH 312
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFE 155
M+ ++PD ++ + +SAC+ G +++ ++E
Sbjct: 313 EMINKDVRPDTISITSAISACAQVGSLEQARSMYE 347
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 234 bits (597), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 119/315 (37%), Positives = 191/315 (60%), Gaps = 4/315 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI Q+ AI R+ + + + V++S+ L AC++ S +F +HGF I+H
Sbjct: 513 MITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIKHS 572
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ +VY+ + L+D Y+K G + A NVF M EKN V++ +++ + G HG + +L L+
Sbjct: 573 LASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACGNHGKLKDSLCLFH 632
Query: 121 SML-RSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M+ +SGI+PD + F+ I+S+C + G VDEG+ F SM + + I+P EHY CV D+ GR
Sbjct: 633 EMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQEHYACVVDLFGR 692
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
GR+ EAYE VK + + +WG++LGAC+ H EL +V + KL+ ++ +GY+
Sbjct: 693 AGRLTEAYETVKSMPFPPDA-GVWGTLLGACRLHKNVELAEVASSKLMDLDPSN--SGYY 749
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
VL+SN +A EWE+V +VR+ + E+ + K G S +EI + FVS D HP+S IY
Sbjct: 750 VLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIEINKRTHLFVSGDVNHPESSHIY 809
Query: 300 DILDKLTMDIKDAGY 314
+L+ L +++ GY
Sbjct: 810 SLLNSLLGELRLEGY 824
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 103/214 (48%), Gaps = 3/214 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GY NGL ++ R + K+ PN +TL SILP ++ +LHGF I+
Sbjct: 412 MISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIKKG 471
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
D G A++D Y+K G ++ A +F R+ +++ V++ +M+ Q A+ ++
Sbjct: 472 FDNRCNIGCAVIDMYAKCGRMNLAYEIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFR 531
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M SGI D V+ A LSAC+ G I M+K H + + DM +
Sbjct: 532 QMGVSGICYDCVSISAALSACANLPSESFGKAIHGFMIK-HSLASDVYSESTLIDMYAKC 590
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
G + A K + E V W SI+ AC NHG
Sbjct: 591 GNLKAAMNVFKTMKEKNIVS--WNSIIAACGNHG 622
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 112/210 (53%), Gaps = 3/210 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GY Q+GL E+++ E + V+P+A+T SS+LP+ S ++ + Q+H + +RH
Sbjct: 311 MISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHS 370
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ +++ +AL+D Y K +S A+N+F++ + V +T M+ Y +G+ +L ++
Sbjct: 371 ISLDIFLTSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFR 430
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
+++ I P+ + V+IL + G E+ ++K C V DM +
Sbjct: 431 WLVKVKISPNEITLVSILPVIGILLALKLGRELHGFIIK-KGFDNRCNIGCAVIDMYAKC 489
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGAC 210
GR+ AYE ++L + V W S++ C
Sbjct: 490 GRMNLAYEIFERLSKRDIVS--WNSMITRC 517
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 70/142 (49%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M+ GY + G + I + ++ PNAVT +L C+S I QLHG +
Sbjct: 210 MLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSG 269
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+D +L+ YSK G A +F M ++VT+ M+ Y Q G+ +LT +
Sbjct: 270 VDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFY 329
Query: 121 SMLRSGIKPDAVAFVAILSACS 142
M+ SG+ PDA+ F ++L + S
Sbjct: 330 EMISSGVLPDAITFSSLLPSVS 351
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 93/219 (42%), Gaps = 8/219 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+ + +NGL +A+ + L V P+ T ++ AC + + L
Sbjct: 109 IISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLSDTVSSLG 168
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
MD N + ++L+ Y + G I +F+R+ +K+ V + M+ Y + G + +
Sbjct: 169 MDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAKCGALDSVIKGFS 228
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M I P+AV F +LS C+ L+D G+++ +V + + + M +
Sbjct: 229 VMRMDQISPNAVTFDCVLSVCASKLLIDLGVQL-HGLVVVSGVDFEGSIKNSLLSMYSKC 287
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELG 219
GR +A + + + V W C GY + G
Sbjct: 288 GRFDDASKLFRMMSRADTV--TWN-----CMISGYVQSG 319
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 6/133 (4%)
Query: 13 KAILTLREA--LLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTA 70
K L LR + L + IP ++L +L ACS+ + Q+H F I + + + Y
Sbjct: 18 KKSLPLRNSSRFLEETIPRRLSL--LLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDER 75
Query: 71 LVDTYSKSGAISYAENVFNRMPEKNSV--TYTTMMMSYGQHGMGRRALTLYDSMLRSGIK 128
++ Y+ G+ S +F R+ + S + +++ S+ ++G+ +AL Y ML G+
Sbjct: 76 ILGMYAMCGSFSDCGKMFYRLDLRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVS 135
Query: 129 PDAVAFVAILSAC 141
PD F ++ AC
Sbjct: 136 PDVSTFPCLVKAC 148
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 234 bits (596), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 123/314 (39%), Positives = 184/314 (58%), Gaps = 3/314 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI G+ QNG A+ + V P+ T S++ A + A +HG +R
Sbjct: 409 MILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSC 468
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+D+NV+ TALVD Y+K GAI A +F+ M E++ T+ M+ YG HG G+ AL L++
Sbjct: 469 LDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFE 528
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M + IKP+ V F++++SACS++GLV+ GL+ F M + + I+ S +HY + D+LGR
Sbjct: 529 EMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRA 588
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
GR+ EA++F+ Q+ V ++G++LGAC+ H + AE+L + + GYHV
Sbjct: 589 GRLNEAWDFIMQMPVKPAV-NVYGAMLGACQIHKNVNFAEKAAERLFELNPDD--GGYHV 645
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LL+NIY WE V +VR + +GL K GCS+VEI V+ F S HP S +IY
Sbjct: 646 LLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYA 705
Query: 301 ILDKLTMDIKDAGY 314
L+KL IK+AGY
Sbjct: 706 FLEKLICHIKEAGY 719
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 90/150 (60%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++AGY+QNG+ A+ ++ + P+ +T+ S+LPA S+ I+ ++HG+++R
Sbjct: 207 IVAGYSQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG 266
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
D V TALVD Y+K G++ A +F+ M E+N V++ +M+ +Y Q+ + A+ ++
Sbjct: 267 FDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQ 326
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEG 150
ML G+KP V+ + L AC+ G ++ G
Sbjct: 327 KMLDEGVKPTDVSVMGALHACADLGDLERG 356
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 19/217 (8%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M+ G+ + +KA+ V P + +L C + ++HG ++
Sbjct: 106 MLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSG 165
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+++A T L + Y+K ++ A VF+RMPE++ V++ T++ Y Q+GM R AL +
Sbjct: 166 FSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALEMVK 225
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEI--------FESMVKIHKIKPSTEHYCC 172
SM +KP + V++L A S L+ G EI F+S+V I
Sbjct: 226 SMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIST---------A 276
Query: 173 VADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGA 209
+ DM + G + A + + E NV+ W S++ A
Sbjct: 277 LVDMYAKCGSLETARQLFDGMLER-NVVS-WNSMIDA 311
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 101/230 (43%), Gaps = 6/230 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI Y QN ++A+L ++ L V P V++ L AC+ G + +H S+
Sbjct: 308 MIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELG 367
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+D+NV +L+ Y K + A ++F ++ + V++ M++ + Q+G AL +
Sbjct: 368 LDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFS 427
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M +KPD +V++++A + + I +V + + + DM +
Sbjct: 428 QMRSRTVKPDTFTYVSVITAIAELSITHHAKWI-HGVVMRSCLDKNVFVTTALVDMYAKC 486
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSME 230
G ++ A + E + W +++ HG+ GK E M+
Sbjct: 487 GAIMIARLIFDMMSERH--VTTWNAMIDGYGTHGF---GKAALELFEEMQ 531
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 234 bits (596), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 121/327 (37%), Positives = 198/327 (60%), Gaps = 5/327 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREAL--LHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
MIA Y +NG +A+ T RE + PN+VT+ S+L AC+S ++ +HG+ +R
Sbjct: 254 MIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILR 313
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+D + +ALV Y + G + + VF+RM +++ V++ +++ SYG HG G++A+ +
Sbjct: 314 RGLDSILPVISALVTMYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQI 373
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
++ ML +G P V FV++L ACS+ GLV+EG +FE+M + H IKP EHY C+ D+LG
Sbjct: 374 FEEMLANGASPTPVTFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLG 433
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
R R+ EA + V+ + + ++WGS+LG+C+ HG EL + + +L ++E + AG
Sbjct: 434 RANRLDEAAKMVQDMRTEPGP-KVWGSLLGSCRIHGNVELAERASRRLFALEPKN--AGN 490
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEI 298
+VLL++IYAE W+ V RV+ + +GL K G +E+ + FVS DE +P +I
Sbjct: 491 YVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQI 550
Query: 299 YDILDKLTMDIKDAGYKTRYNSSLNEI 325
+ L KL D+K+ GY + L E+
Sbjct: 551 HAFLVKLAEDMKEKGYIPQTKGVLYEL 577
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 100/208 (48%), Gaps = 13/208 (6%)
Query: 29 NAVTLSSILPAC----SSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYA 84
+ T + +L AC + + ++H R +VY T LVD Y++ G + YA
Sbjct: 177 DRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVDMYARFGCVDYA 236
Query: 85 ENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLR--SGIKPDAVAFVAILSACS 142
VF MP +N V+++ M+ Y ++G AL + M+R P++V V++L AC+
Sbjct: 237 SYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNSVTMVSVLQACA 296
Query: 143 YAGLVDEGLEIFESMVK--IHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVM 200
+++G I +++ + I P + M GR G+ +E + V D +V+
Sbjct: 297 SLAALEQGKLIHGYILRRGLDSILPVIS---ALVTMYGRCGK-LEVGQRVFDRMHDRDVV 352
Query: 201 EIWGSILGACKNHGYFELGKVVAEKLLS 228
W S++ + HGY + + E++L+
Sbjct: 353 S-WNSLISSYGVHGYGKKAIQIFEEMLA 379
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
P+ T ++ C S++ A ++H + + DQ+ + T L+ YS G++ YA V
Sbjct: 75 PSQQTYELLILCCGHRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKV 134
Query: 88 FNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSAC 141
F++ ++ + + + G G L LY M R G++ D + +L AC
Sbjct: 135 FDKTRKRTIYVWNALFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKAC 188
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 233 bits (594), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/315 (37%), Positives = 191/315 (60%), Gaps = 3/315 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GY+ NG + A+ RE + PN VTL S+LPA S GS+ LH ++
Sbjct: 245 MISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSG 304
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + G+AL+D YSK G I A +VF R+P +N +T++ M+ + HG A+ +
Sbjct: 305 IRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFC 364
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M ++G++P VA++ +L+ACS+ GLV+EG F MV + ++P EHY C+ D+LGR
Sbjct: 365 KMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRS 424
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + EA EF+ + + + IW ++LGAC+ G E+GK VA L+ M +G +V
Sbjct: 425 GLLDEAEEFILNMPIKPDDV-IWKALLGACRMQGNVEMGKRVANILMDMVPHD--SGAYV 481
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LSN+YA +G W V +R ++ EK + K+ GCSL++I G+++ FV D+ HP++ EI
Sbjct: 482 ALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINS 541
Query: 301 ILDKLTMDIKDAGYK 315
+L +++ ++ AGY+
Sbjct: 542 MLVEISDKLRLAGYR 556
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 102/238 (42%), Gaps = 56/238 (23%)
Query: 26 VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH--------------------FM---- 61
V PN T S+L AC+ TG I Q+HG ++++ FM
Sbjct: 124 VEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDAR 183
Query: 62 ---------------------DQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYT 100
D + ++D Y + G A +F++M +++ V++
Sbjct: 184 VLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWN 243
Query: 101 TMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVD--EGLEIF--ES 156
TM+ Y +G + A+ ++ M + I+P+ V V++L A S G ++ E L ++ +S
Sbjct: 244 TMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDS 303
Query: 157 MVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
++I + S + DM + G + +A ++L + NV+ W +++ HG
Sbjct: 304 GIRIDDVLGSA-----LIDMYSKCGIIEKAIHVFERLPRE-NVI-TWSAMINGFAIHG 354
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/125 (23%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 36 ILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGA----ISYAENVFNRM 91
+ P ++ +I +Q+H I+ ++ A ++ + S + YA +FN+M
Sbjct: 26 LFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQM 85
Query: 92 PEKNSVTYTTMMMSYGQHGMGRR--ALTL-YDSMLRSGIKPDAVAFVAILSACSYAGLVD 148
P++N ++ T++ + + + A+TL Y+ M ++P+ F ++L AC+ G +
Sbjct: 86 PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQ 145
Query: 149 EGLEI 153
EG +I
Sbjct: 146 EGKQI 150
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 233 bits (593), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 190/326 (58%), Gaps = 4/326 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSST-GSIAFATQLHGFSIRH 59
M+AGY Q G E AI E + PN T SSIL C++T S+ Q HGF+I+
Sbjct: 465 MLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKS 524
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+D ++ +AL+ Y+K G I AE VF R EK+ V++ +M+ Y QHG +AL ++
Sbjct: 525 RLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVF 584
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M + +K D V F+ + +AC++AGLV+EG + F+ MV+ KI P+ EH C+ D+ R
Sbjct: 585 KEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSR 644
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G++ +A + ++ + IW +IL AC+ H ELG++ AEK+++M+ E A +
Sbjct: 645 AGQLEKAMKVIENMPNPAGST-IWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAA--Y 701
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
VLLSN+YAE G+W+ +VR + E+ + KE G S +E+ F++ D HP +IY
Sbjct: 702 VLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIY 761
Query: 300 DILDKLTMDIKDAGYKTRYNSSLNEI 325
L+ L+ +KD GY+ + L +I
Sbjct: 762 MKLEDLSTRLKDLGYEPDTSYVLQDI 787
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 98/218 (44%), Gaps = 14/218 (6%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+G+ QN E+A+ E V PN T S IL A + +++H ++
Sbjct: 368 MISGFLQNDGKEEAVDLFSEMKRKGVRPNEFTYSVILTALP----VISPSEVHAQVVKTN 423
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+++ GTAL+D Y K G + A VF+ + +K+ V ++ M+ Y Q G A+ ++
Sbjct: 424 YERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFG 483
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD----M 176
+ + GIKP+ F +IL+ C+ + F IK + CV+ M
Sbjct: 484 ELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFA----IKSRLDSSLCVSSALLTM 539
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
+ G + A E K+ E V W S++ HG
Sbjct: 540 YAKKGNIESAEEVFKRQREKDLVS--WNSMISGYAQHG 575
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 64/127 (50%)
Query: 33 LSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMP 92
SS+L ++ F QLH I+ +V GT+LVDTY K VF+ M
Sbjct: 96 FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMK 155
Query: 93 EKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLE 152
E+N VT+TT++ Y ++ M LTL+ M G +P++ F A L + G+ GL+
Sbjct: 156 ERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ 215
Query: 153 IFESMVK 159
+ +VK
Sbjct: 216 VHTVVVK 222
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 108/226 (47%), Gaps = 17/226 (7%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH- 59
MI+GY NGL+ +A+ L+ V + + +S++ C++ + F QLH +++
Sbjct: 266 MISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYG 325
Query: 60 -FMDQNVYAGTALVDTYSKSGAISYAENVFNRMP-EKNSVTYTTMMMSYGQHGMGRRALT 117
DQN+ TAL+ YSK A+ A +F + N V++T M+ + Q+ A+
Sbjct: 326 FLFDQNIR--TALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVD 383
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADML 177
L+ M R G++P+ + IL+A V E+ +VK + + ST + D
Sbjct: 384 LFSEMKRKGVRPNEFTYSVILTALP----VISPSEVHAQVVKTNYERSSTVG-TALLDAY 438
Query: 178 GRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVA 223
++G+V EA + G D + W ++L GY + G+ A
Sbjct: 439 VKLGKVEEAAKVFS--GIDDKDIVAWSAMLA-----GYAQTGETEA 477
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/225 (20%), Positives = 103/225 (45%), Gaps = 23/225 (10%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+GY +N +N++ + PN+ T ++ L + G Q+H +++
Sbjct: 165 LISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG 224
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+D+ + +L++ Y K G + A +F++ K+ VT+ +M+ Y +G+ AL ++
Sbjct: 225 LDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFY 284
Query: 121 SMLRSGIKPDAVAFVAILSACS-----------YAGLVDEGLEIFESMVKIHKIKPSTEH 169
SM + ++ +F +++ C+ + +V G +F+ ++ + ++
Sbjct: 285 SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGF-LFDQNIRTALMVAYSK- 342
Query: 170 YCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
C A +++A K++G GNV+ I G +N G
Sbjct: 343 --CTA--------MLDALRLFKEIGCVGNVVSWTAMISGFLQNDG 377
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 232 bits (592), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/316 (37%), Positives = 186/316 (58%), Gaps = 9/316 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLH------G 54
+IAGYTQNG NE+A+ V P + ++IL AC+ + Q H G
Sbjct: 357 LIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHG 416
Query: 55 FSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRR 114
F + + +++ G +L+D Y K G + VF +M E++ V++ M++ + Q+G G
Sbjct: 417 FKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNE 476
Query: 115 ALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVA 174
AL L+ ML SG KPD + + +LSAC +AG V+EG F SM + + P +HY C+
Sbjct: 477 ALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMV 536
Query: 175 DMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKR 234
D+LGR G + EA ++++ + + IWGS+L ACK H LGK VAEKLL E E
Sbjct: 537 DLLGRAGFLEEAKSMIEEMPMQPDSV-IWGSLLAACKVHRNITLGKYVAEKLL--EVEPS 593
Query: 235 VAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQ 294
+G +VLLSN+YAE G+WE+V VR + ++G+ K+ GCS ++I G + F+ +D+ HP+
Sbjct: 594 NSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQGHDHVFMVKDKSHPR 653
Query: 295 SGEIYDILDKLTMDIK 310
+I+ +LD L +++
Sbjct: 654 KKQIHSLLDILIAEMR 669
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 127/256 (49%), Gaps = 13/256 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK--VIPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
M++G+ Q+ E+A+ A++HK + N + +S+L ACS + Q+H +
Sbjct: 123 MVSGFAQHDRCEEALCYF--AMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAK 180
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+VY G+ALVD YSK G ++ A+ VF+ M ++N V++ +++ + Q+G AL +
Sbjct: 181 SPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDV 240
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+ ML S ++PD V +++SAC+ + G E+ +VK K++ DM
Sbjct: 241 FQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYA 300
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSME-TEKRVAG 237
+ R+ EA F+ + M I I GY A +L+ + E+ V
Sbjct: 301 KCSRIKEA-RFI------FDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVS 353
Query: 238 YHVLLSNIYAEEGEWE 253
++ L++ Y + GE E
Sbjct: 354 WNALIAG-YTQNGENE 368
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 113/252 (44%), Gaps = 39/252 (15%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH- 59
+I + QNG +A+ + L +V P+ VTL+S++ AC+S +I ++HG +++
Sbjct: 224 LITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKND 283
Query: 60 -----------FMD--------------------QNVYAGTALVDTYSKSGAISYAENVF 88
F+D +NV A T+++ Y+ + + A +F
Sbjct: 284 KLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMF 343
Query: 89 NRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVD 148
+M E+N V++ ++ Y Q+G AL+L+ + R + P +F IL AC+ +
Sbjct: 344 TKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACADLAELH 403
Query: 149 EGLEIFESMVKI-HKIKPSTEHYCCVA----DMLGRVGRVVEAYEFVKQLGEDGNVMEIW 203
G++ ++K K + E V DM + G V E Y +++ E V W
Sbjct: 404 LGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDCVS--W 461
Query: 204 GSILGACKNHGY 215
+++ +GY
Sbjct: 462 NAMIIGFAQNGY 473
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 89/183 (48%), Gaps = 7/183 (3%)
Query: 63 QNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSM 122
+N+Y ++V +K G + A+++F MPE++ T+ +M+ + QH AL + M
Sbjct: 84 RNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAMM 143
Query: 123 LRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGR 182
+ G + +F ++LSACS +++G+++ S++ + DM + G
Sbjct: 144 HKEGFVLNEYSFASVLSACSGLNDMNKGVQV-HSLIAKSPFLSDVYIGSALVDMYSKCGN 202
Query: 183 VVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLL 242
V +A ++G D NV+ W S++ + +G V A + M E RV V L
Sbjct: 203 VNDAQRVFDEMG-DRNVVS-WNSLITCFEQNG----PAVEALDVFQMMLESRVEPDEVTL 256
Query: 243 SNI 245
+++
Sbjct: 257 ASV 259
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 231 bits (589), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 116/311 (37%), Positives = 182/311 (58%), Gaps = 4/311 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M+ Y ++ +AI RE + PN VT+ ++LP C+ S+ Q HG+ IR
Sbjct: 539 MVRIYAESCCPNEAIGVFREIQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRGG 598
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ GT L+D Y+K G++ +A +VF ++ V +T M+ Y HG G+ AL +Y
Sbjct: 599 LGDIRLKGT-LLDVYAKCGSLKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYS 657
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M S IKPD V +L+AC +AGL+ +GL+I++S+ +H +KP+ E Y C D++ R
Sbjct: 658 HMTESNIKPDHVFITTMLTACCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARG 717
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
GR+ +AY FV Q+ + N IWG++L AC + +LG VA LL E++ G HV
Sbjct: 718 GRLDDAYSFVTQMPVEPNA-NIWGTLLRACTTYNRMDLGHSVANHLLQAESDD--TGNHV 774
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
L+SN+YA + +WE V +RN + +K + K GCS +E+ G N FVS D HP+ I+D
Sbjct: 775 LISNMYAADAKWEGVMELRNLMKKKEMKKPAGCSWLEVDGQRNVFVSGDCSHPRRDSIFD 834
Query: 301 ILDKLTMDIKD 311
+++ L + +K+
Sbjct: 835 LVNALYLQMKE 845
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 104/214 (48%), Gaps = 7/214 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTG-SIAFAT--QLHGFSI 57
+IAG+++N + A + L PN T++++LP C+S +IA + Q+H + +
Sbjct: 195 IIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVV 254
Query: 58 -RHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRAL 116
R ++ +V+ +LV Y + G I A ++F RM K+ V++ ++ Y + +A
Sbjct: 255 QRSWLQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAF 314
Query: 117 TLYDSMLRSG-IKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD 175
L+ +++ G + PD+V ++IL C+ + G EI +++ + T +
Sbjct: 315 QLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALIS 374
Query: 176 MLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGA 209
R G AY + L +++ W +IL A
Sbjct: 375 FYARFGDTSAAY-WAFSLMSTKDIIS-WNAILDA 406
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 75/144 (52%), Gaps = 4/144 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK--VIPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
+IAGY N KA L L+HK V P++VT+ SILP C+ +A ++H + +R
Sbjct: 300 VIAGYASNCEWFKA-FQLFHNLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILR 358
Query: 59 H-FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
H ++ ++ G AL+ Y++ G S A F+ M K+ +++ ++ ++ + L
Sbjct: 359 HSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLN 418
Query: 118 LYDSMLRSGIKPDAVAFVAILSAC 141
L +L I D+V +++L C
Sbjct: 419 LLHHLLNEAITLDSVTILSLLKFC 442
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 79/173 (45%), Gaps = 8/173 (4%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAI-SYAEN 86
P++VT + +LP C G +H + I+ ++++ G ALV Y+K G I A
Sbjct: 120 PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYT 179
Query: 87 VFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAG- 145
F+ + +K+ V++ ++ + ++ M A + ML+ +P+ +L C+
Sbjct: 180 AFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVCASMDK 239
Query: 146 --LVDEGLEIFESMVKIHKIKPSTEHYCC--VADMLGRVGRVVEAYEFVKQLG 194
G +I +V+ ++ T + C + RVGR+ EA ++G
Sbjct: 240 NIACRSGRQIHSYVVQRSWLQ--THVFVCNSLVSFYLRVGRIEEAASLFTRMG 290
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 229 bits (584), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 192/313 (61%), Gaps = 4/313 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IAGY + GL ++A + + + + +A + SIL AC+ +G ++ ++H R
Sbjct: 286 IIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSILKRSN 345
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ N Y AL+D Y+K G + A +VFN +P+K+ V++ TM+ G HG G+ A+ L+
Sbjct: 346 LGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVSWNTMLHGLGVHGHGKEAIELFS 405
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M R GI+PD V F+A+L +C++AGL+DEG++ F SM K++ + P EHY C+ D+LGRV
Sbjct: 406 RMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRV 465
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
GR+ EA + V+ + + NV+ IWG++LGAC+ H ++ K V + L+ ++ G +
Sbjct: 466 GRLKEAIKVVQTMPMEPNVV-IWGALLGACRMHNEVDIAKEVLDNLVKLDPCD--PGNYS 522
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LLSNIYA +WE V +R+++ G+ K G S VE+ ++ F D+ HP+S +IY
Sbjct: 523 LLSNIYAAAEDWEGVADIRSKMKSMGVEKPSGASSVELEDGIHEFTVFDKSHPKSDQIYQ 582
Query: 301 ILDKLTMDIKDAG 313
+L L ++ D G
Sbjct: 583 MLGSL-IEPPDPG 594
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 91/173 (52%), Gaps = 8/173 (4%)
Query: 62 DQNVYAGTALVDTYSKSGAISYAENVFNRMP--EKNSVTYTTMMMSYGQHGMGRRALTLY 119
++N + + +V YSK+G + A +F++MP KN VT+T ++ Y + G+ + A L
Sbjct: 244 ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLV 303
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
D M+ SG+K DA A ++IL+AC+ +GL+ G+ I S++K + + + DM +
Sbjct: 304 DQMVASGLKFDAAAVISILAACTESGLLSLGMRI-HSILKRSNLGSNAYVLNALLDMYAK 362
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETE 232
G + +A++ + + V W ++L HG+ GK E M E
Sbjct: 363 CGNLKKAFDVFNDIPKKDLVS--WNTMLHGLGVHGH---GKEAIELFSRMRRE 410
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 117/299 (39%), Gaps = 37/299 (12%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I + QN +A E + + T +L ACS + +H +
Sbjct: 88 LIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLG 147
Query: 61 MDQNVYAGTALVDTYSKSGAISY--AENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+ ++Y AL+D YS+ G + A +F +M E+++V++ +M+ + G R A L
Sbjct: 148 LSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRL 207
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPST--EHYCCVADM 176
+D M + D +++ +L + + + E+FE M + + + ST Y DM
Sbjct: 208 FDEMPQR----DLISWNTMLDGYARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGDM 263
Query: 177 -LGRV-------------------------GRVVEAYEFVKQLGEDGNVMEIWG--SILG 208
+ RV G + EA V Q+ G + SIL
Sbjct: 264 EMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILA 323
Query: 209 ACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGL 267
AC G LG + L + LL ++YA+ G + V N I +K L
Sbjct: 324 ACTESGLLSLGMRIHSILKRSNLGSNAYVLNALL-DMYAKCGNLKKAFDVFNDIPKKDL 381
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 228 bits (581), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 118/331 (35%), Positives = 194/331 (58%), Gaps = 4/331 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+GY Q GL+ + + + + T +++L A +S S+ QLH F IR
Sbjct: 423 LISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSG 482
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+NV++G+ LVD Y+K G+I A VF MP++N+V++ ++ ++ +G G A+ +
Sbjct: 483 NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFA 542
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+ SG++PD+V+ + +L+ACS+ G V++G E F++M I+ I P +HY C+ D+LGR
Sbjct: 543 KMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRN 602
Query: 181 GRVVEAYEFVKQLG-EDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
GR EA + + ++ E +M W S+L AC+ H L + AEKL SME + A Y
Sbjct: 603 GRFAEAEKLMDEMPFEPDEIM--WSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAY- 659
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
V +SNIYA GEWE V V+ + E+G+ K S VE+ ++ F S D+ HP EI
Sbjct: 660 VSMSNIYAAAGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIV 719
Query: 300 DILDKLTMDIKDAGYKTRYNSSLNEIVETVE 330
+++LT +I+ GYK +S + ++ E ++
Sbjct: 720 RKINELTAEIEREGYKPDTSSVVQDVDEQMK 750
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 75/155 (48%), Gaps = 6/155 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK--VIPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
++ Y +N ++A R+ +P+ VT +++LP C+ Q+H F+++
Sbjct: 116 LMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVK 175
Query: 59 HFMDQNVY--AGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRAL 116
D N + L+ +Y + + A +F +PEK+SVT+ T++ Y + G+ ++
Sbjct: 176 LGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESI 235
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGL 151
L+ M +SG +P F +L A GL D L
Sbjct: 236 HLFLKMRQSGHQPSDFTFSGVLKAV--VGLHDFAL 268
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 102/215 (47%), Gaps = 5/215 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+ Y+Q E ++ RE +++L ++ S+ QLH ++
Sbjct: 322 VISSYSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLAT 381
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
D ++ G +LVD Y+K AE +F +P++ +V++T ++ Y Q G+ L L+
Sbjct: 382 ADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFT 441
Query: 121 SMLRSGIKPDAVAFVAILSA-CSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M S ++ D F +L A S+A L+ G ++ +++ ++ + + DM +
Sbjct: 442 KMRGSNLRADQSTFATVLKASASFASLL-LGKQLHAFIIRSGNLE-NVFSGSGLVDMYAK 499
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
G + +A + +++ + V W +++ A ++G
Sbjct: 500 CGSIKDAVQVFEEMPDRNAVS--WNALISAHADNG 532
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 6/142 (4%)
Query: 1 MIAGYTQNGLNEKAI---LTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSI 57
+I GY ++GL ++I L +R++ H+ P+ T S +L A A QLH S+
Sbjct: 221 LITGYEKDGLYTESIHLFLKMRQSG-HQ--PSDFTFSGVLKAVVGLHDFALGQQLHALSV 277
Query: 58 RHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
++ G ++D YSK + +F+ MPE + V+Y ++ SY Q +L
Sbjct: 278 TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYEASLH 337
Query: 118 LYDSMLRSGIKPDAVAFVAILS 139
+ M G F +LS
Sbjct: 338 FFREMQCMGFDRRNFPFATMLS 359
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 228 bits (580), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 118/327 (36%), Positives = 195/327 (59%), Gaps = 3/327 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MIAGY+Q+G + +A+ + N + SS L C+ ++ QLHG ++
Sbjct: 380 MIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 439
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + G AL+ Y K G+I A ++F M K+ V++ TM+ Y +HG G AL ++
Sbjct: 440 YETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFE 499
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
SM R G+KPD VA+LSACS+ GLVD+G + F +M + + + P+++HY C+ D+LGR
Sbjct: 500 SMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRA 559
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + +A+ +K + + + IWG++LGA + HG EL + A+K+ +ME E +G +V
Sbjct: 560 GLLEDAHNLMKNMPFEPDA-AIWGTLLGASRVHGNTELAETAADKIFAMEPEN--SGMYV 616
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LLSN+YA G W +V ++R ++ +KG+ K G S +EI + F DE HP+ EI+
Sbjct: 617 LLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFA 676
Query: 301 ILDKLTMDIKDAGYKTRYNSSLNEIVE 327
L++L + +K AGY ++ + L+++ E
Sbjct: 677 FLEELDLRMKKAGYVSKTSVVLHDVEE 703
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 111/236 (47%), Gaps = 22/236 (9%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M++GY QN + E+A RE N V+ +++L + A +L F +
Sbjct: 287 MVSGYIQNRMVEEA----RELFDKMPERNEVSWNAMLAGYVQGERMEMAKEL--FDV--M 338
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+NV ++ Y++ G IS A+N+F++MP+++ V++ M+ Y Q G AL L+
Sbjct: 339 PCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFV 398
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD----M 176
M R G + + +F + LS C+ ++ G ++ +V K E C V + M
Sbjct: 399 QMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV-----KGGYETGCFVGNALLLM 453
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETE 232
+ G + EA + K++ G + W +++ HG+ G+V SM+ E
Sbjct: 454 YCKCGSIEEANDLFKEMA--GKDIVSWNTMIAGYSRHGF---GEVALRFFESMKRE 504
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 96/220 (43%), Gaps = 15/220 (6%)
Query: 10 LNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGT 69
+ +K I+ R+ + + V+ ++I+ + +G I A QL S Q+V+ T
Sbjct: 230 VKKKKIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPV----QDVFTWT 285
Query: 70 ALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKP 129
A+V Y ++ + A +F++MPE+N V++ M+ Y Q A L+D M +
Sbjct: 286 AMVSGYIQNRMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS- 344
Query: 130 DAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEF 189
+ +++ + G + E +F+ M K + + + + G EA
Sbjct: 345 ---TWNTMITGYAQCGKISEAKNLFDKMPKRDPVS-----WAAMIAGYSQSGHSFEALRL 396
Query: 190 VKQLGEDGNVME--IWGSILGACKNHGYFELGKVVAEKLL 227
Q+ +G + + S L C + ELGK + +L+
Sbjct: 397 FVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLV 436
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 225 bits (574), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/329 (36%), Positives = 191/329 (58%), Gaps = 5/329 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IAGY Q GL+E+A+ + PN VT +S+L A S + Q H +R
Sbjct: 225 IIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRE 284
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ +L+D YSK G +SYA +F+ MPE+ ++++ M++ Y +HG+GR L L+
Sbjct: 285 LPFYAVLQNSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFR 344
Query: 121 SML-RSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK-IHKIKPSTEHYCCVADMLG 178
M +KPDAV +A+LS CS+ + D GL IF+ MV + KP TEHY C+ DMLG
Sbjct: 345 LMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLG 404
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
R GR+ EA+EF+K++ + GS+LGAC+ H ++G+ V +L+ +E E AG
Sbjct: 405 RAGRIDEAFEFIKRMPSKPTA-GVLGSLLGACRVHLSVDIGESVGRRLIEIEPEN--AGN 461
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEI 298
+V+LSN+YA G W +V+ VR + +K + KE G S ++ ++YF + D HP+ E+
Sbjct: 462 YVILSNLYASAGRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEV 521
Query: 299 YDILDKLTMDIKDAGYKTRYNSSLNEIVE 327
+ ++++ +K AGY + L ++ E
Sbjct: 522 LAKMKEISIKMKQAGYVPDLSCVLYDVDE 550
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 114/239 (47%), Gaps = 14/239 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+ Y+Q G + +A+ E + PN T +++L +C + Q+HG ++
Sbjct: 124 MISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWN 183
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
D +++ G++L+D Y+K+G I A +F +PE++ V+ T ++ Y Q G+ AL ++
Sbjct: 184 YDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFH 243
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVA----DM 176
+ G+ P+ V + ++L+A S L+D G + H ++ Y + DM
Sbjct: 244 RLHSEGMSPNYVTYASLLTALSGLALLDHGKQ-----AHCHVLRRELPFYAVLQNSLIDM 298
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRV 235
+ G + A + E + W ++L HG LG+ V E M EKRV
Sbjct: 299 YSKCGNLSYARRLFDNMPERTAIS--WNAMLVGYSKHG---LGREVLELFRLMRDEKRV 352
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 78/165 (47%), Gaps = 9/165 (5%)
Query: 35 SILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK 94
++L AC ++ ++H I+ Y T L+ Y K + A V + MPEK
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK 116
Query: 95 NSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIF 154
N V++T M+ Y Q G ALT++ M+RS KP+ F +L++C A + G +I
Sbjct: 117 NVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIH 176
Query: 155 ESMVKI----HKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGE 195
+VK H S+ + DM + G++ EA E + L E
Sbjct: 177 GLIVKWNYDSHIFVGSS-----LLDMYAKAGQIKEAREIFECLPE 216
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 225 bits (574), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 112/328 (34%), Positives = 195/328 (59%), Gaps = 4/328 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GY QNG ++A+ R+ +L+ + +++ + ACS S+ + H ++++H
Sbjct: 568 VITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHL 627
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ + + +L+D Y+K+G+I+ + VFN + EK++ ++ M+M YG HG+ + A+ L++
Sbjct: 628 LEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFE 687
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M R+G PD + F+ +L+AC+++GL+ EGL + M +KP+ +HY CV DMLGR
Sbjct: 688 EMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRA 747
Query: 181 GRVVEAYEFV-KQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G++ +A V +++ E+ +V IW S+L +C+ H E+G+ VA KL +E EK +
Sbjct: 748 GQLDKALRVVAEEMSEEADV-GIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEK--PENY 804
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
VLLSN+YA G+WE+V +VR ++ E L K+ GCS +E+ V FV + EI
Sbjct: 805 VLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIK 864
Query: 300 DILDKLTMDIKDAGYKTRYNSSLNEIVE 327
+ L M I GY+ S +++ E
Sbjct: 865 SLWSILEMKISKMGYRPDTMSVQHDLSE 892
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 107/214 (50%), Gaps = 3/214 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G+ Q+ ++ + + ++P++ T+ S+L ACS S+ ++HGF IR++
Sbjct: 467 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNW 526
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++++++ +++ Y G + + +F+ M +K+ V++ T++ Y Q+G RAL ++
Sbjct: 527 LERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFR 586
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+ GI+ ++ + + ACS + G E +K H ++ C + DM +
Sbjct: 587 QMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALK-HLLEDDAFIACSLIDMYAKN 645
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
G + ++ + L E W +++ HG
Sbjct: 646 GSITQSSKVFNGLKEKSTAS--WNAMIMGYGIHG 677
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 105/227 (46%), Gaps = 12/227 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREAL-LHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+I+ Y++N L ++ + T E + ++P+ T ++ AC+ + +HG ++
Sbjct: 157 VISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKT 216
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ ++V+ G ALV Y G ++ A +F+ MPE+N V++ +M+ + +G + L
Sbjct: 217 GLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLL 276
Query: 120 DSMLRS----GIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD 175
M+ PD V +L C+ + G + VK+ K + + D
Sbjct: 277 GEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNN-ALMD 335
Query: 176 MLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACK----NHGYFEL 218
M + G + A + + ++ + NV+ W +++G HG F++
Sbjct: 336 MYSKCGCITNA-QMIFKMNNNKNVVS-WNTMVGGFSAEGDTHGTFDV 380
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 6/147 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK----VIPNAVTLSSILPACSSTGSIAFATQLHGFS 56
MI ++ NG +E++ L L E + +P+ TL ++LP C+ I +HG++
Sbjct: 259 MIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWA 318
Query: 57 IRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRAL 116
++ +D+ + AL+D YSK G I+ A+ +F KN V++ TM+ + G
Sbjct: 319 VKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTF 378
Query: 117 TLYDSMLRSG--IKPDAVAFVAILSAC 141
+ ML G +K D V + + C
Sbjct: 379 DVLRQMLAGGEDVKADEVTILNAVPVC 405
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 2/144 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALL--HKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
M+ G++ G LR+ L V + VT+ + +P C + +LH +S++
Sbjct: 364 MVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLK 423
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
N A V +Y+K G++SYA+ VF+ + K ++ ++ + Q R +L
Sbjct: 424 QEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDA 483
Query: 119 YDSMLRSGIKPDAVAFVAILSACS 142
+ M SG+ PD+ ++LSACS
Sbjct: 484 HLQMKISGLLPDSFTVCSLLSACS 507
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 224 bits (571), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 114/307 (37%), Positives = 177/307 (57%), Gaps = 5/307 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI G +N KA+ RE + V N T +L ACS G++ +H F
Sbjct: 226 MIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQR 285
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
M+ + + G AL++ YS+ G I+ A VF M +K+ ++Y TM+ HG A+ +
Sbjct: 286 MELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFR 345
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+ G +P+ V VA+L+ACS+ GL+D GLE+F SM ++ ++P EHY C+ D+LGRV
Sbjct: 346 DMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRV 405
Query: 181 GRVVEAYEFVKQLG-EDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
GR+ EAY F++ + E ++M G++L ACK HG ELG+ +A++L E+E +G +
Sbjct: 406 GRLEEAYRFIENIPIEPDHIM--LGTLLSACKIHGNMELGEKIAKRLF--ESENPDSGTY 461
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
VLLSN+YA G+W+ +R + + G+ KE GCS +E+ ++ F+ D HP IY
Sbjct: 462 VLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIEVDNQIHEFLVGDIAHPHKEAIY 521
Query: 300 DILDKLT 306
L +L
Sbjct: 522 QRLQELN 528
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 118/264 (44%), Gaps = 13/264 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI G+ +G + + + + V+P+ ++S+L AC + ++H ++
Sbjct: 98 MIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACD----LKVCREIHAQVLKLG 153
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ G +++ Y KSG + A+ +F+ MP+++ V T M+ Y + G + AL L+
Sbjct: 154 FGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIKEALELFQ 213
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
+ IK D V + A++ +++ LE+F M ++ + + CV +
Sbjct: 214 DV---KIK-DTVCWTAMIDGLVRNKEMNKALELFREM-QMENVSANEFTAVCVLSACSDL 268
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKV-VAEKLLSMETEKRVAGYH 239
G +E +V E+ ME+ + A N Y G + A ++ + +K V Y+
Sbjct: 269 G-ALELGRWVHSFVENQR-MELSNFVGNALINM-YSRCGDINEARRVFRVMRDKDVISYN 325
Query: 240 VLLSNIYAEEGEWENVDRVRNQIT 263
++S + E ++ R+ +
Sbjct: 326 TMISGLAMHGASVEAINEFRDMVN 349
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 32 TLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRM 91
TL S+L +C + IA +H IR F DQ+ + L+ S ++ YA +VF+ +
Sbjct: 31 TLISVLRSCKN---IAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYV 87
Query: 92 PEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSAC 141
N YT M+ + G ++LY M+ + + PD ++L AC
Sbjct: 88 SNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC 137
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 223 bits (569), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 184/314 (58%), Gaps = 4/314 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IAG+ + EKA+ + L P+ + +S+ ACSSTG + +H + I+
Sbjct: 233 LIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSG 292
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+AG L+D Y+KSG+I A +F+R+ +++ V++ +++ +Y QHG G+ A+ ++
Sbjct: 293 EKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFE 352
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M R GI+P+ ++F+++L+ACS++GL+DEG +E M K I P HY V D+LGR
Sbjct: 353 EMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKK-DGIVPEAWHYVTVVDLLGRA 411
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + A F++++ + IW ++L AC+ H ELG AE + ++ + G HV
Sbjct: 412 GDLNRALRFIEEMPIEPTAA-IWKALLNACRMHKNTELGAYAAEHVFELDPDD--PGPHV 468
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
+L NIYA G W + RVR ++ E G+ KE CS VEI ++ FV+ DE+HPQ EI
Sbjct: 469 ILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIAR 528
Query: 301 ILDKLTMDIKDAGY 314
+++ IK+ GY
Sbjct: 529 KWEEVLAKIKELGY 542
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 111/220 (50%), Gaps = 13/220 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+GY+Q+ A+L + L PN TLSS++ A ++ QLHGF ++
Sbjct: 132 LISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCG 191
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
D NV+ G+AL+D Y++ G + A+ VF+ + +N V++ ++ + + +AL L+
Sbjct: 192 FDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQ 251
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVA-----D 175
MLR G +P ++ ++ ACS G +++G + M+K S E A D
Sbjct: 252 GMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK------SGEKLVAFAGNTLLD 305
Query: 176 MLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGY 215
M + G + +A + +L + V W S+L A HG+
Sbjct: 306 MYAKSGSIHDARKIFDRLAKRDVVS--WNSLLTAYAQHGF 343
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/269 (21%), Positives = 116/269 (43%), Gaps = 43/269 (15%)
Query: 34 SSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPE 93
+++L C+ + +H ++ ++ G L++ Y+K G++ A VF +MP+
Sbjct: 64 NTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQ 123
Query: 94 KNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSA------------- 140
++ VT+TT++ Y QH AL ++ MLR G P+ +++ A
Sbjct: 124 RDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQL 183
Query: 141 ------CSYA----------------GLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
C + GL+D+ +F+++ + + + +A
Sbjct: 184 HGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNA----LIAGHAR 239
Query: 179 RVGRVVEAYEFVKQLGEDGNVME--IWGSILGACKNHGYFELGKVVAEKLLSMETEKRVA 236
R G +A E + + DG + S+ GAC + G+ E GK V ++ EK VA
Sbjct: 240 RSG-TEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK-SGEKLVA 297
Query: 237 GYHVLLSNIYAEEGEWENVDRVRNQITEK 265
L ++YA+ G + ++ +++ ++
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKR 326
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 223 bits (568), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 186/331 (56%), Gaps = 5/331 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIP-NAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+I+ Y QNG +A++ E L K + N +TL S L AC+ G++ +H + +H
Sbjct: 335 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH 394
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ N + +AL+ YSK G + + VFN + +++ ++ M+ HG G A+ ++
Sbjct: 395 GIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMF 454
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M + +KP+ V F + ACS+ GLVDE +F M + I P +HY C+ D+LGR
Sbjct: 455 YKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGR 514
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G + +A +F++ + + +WG++LGACK H L ++ +LL E E R G H
Sbjct: 515 SGYLEKAVKFIEAMPIPPST-SVWGALLGACKIHANLNLAEMACTRLL--ELEPRNDGAH 571
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
VLLSNIYA+ G+WENV +R + GL KE GCS +EI G+++ F+S D HP S ++Y
Sbjct: 572 VLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVY 631
Query: 300 DILDKLTMDIKDAGYKTRYNSSLNEIVETVE 330
L ++ +K GY+ + L +I+E E
Sbjct: 632 GKLHEVMEKLKSNGYEPEISQVL-QIIEEEE 661
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 115/246 (46%), Gaps = 35/246 (14%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI G+ Q G +KA+ ++ V + VT+ +L AC+ ++ F Q+ + +
Sbjct: 203 MINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENR 262
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMM----------------- 103
++ N+ A++D Y+K G+I A+ +F+ M EK++VT+TTM+
Sbjct: 263 VNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLN 322
Query: 104 --------------MSYGQHGMGRRALTLYDSM-LRSGIKPDAVAFVAILSACSYAGLVD 148
+Y Q+G AL ++ + L+ +K + + V+ LSAC+ G ++
Sbjct: 323 SMPQKDIVAWNALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALE 382
Query: 149 EGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILG 208
G I S +K H I+ + + M + G + ++ E + E +V +W +++G
Sbjct: 383 LGRWI-HSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSV-EKRDVF-VWSAMIG 439
Query: 209 ACKNHG 214
HG
Sbjct: 440 GLAMHG 445
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 105/224 (46%), Gaps = 8/224 (3%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
PN T ++ A + S++ LHG +++ + +V+ +L+ Y G + A V
Sbjct: 129 PNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKV 188
Query: 88 FNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLV 147
F + EK+ V++ +M+ + Q G +AL L+ M +K V V +LSAC+ +
Sbjct: 189 FTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVGVLSACAKIRNL 248
Query: 148 DEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSIL 207
+ G ++ S ++ +++ + + DM + G + +A + E NV W ++L
Sbjct: 249 EFGRQVC-SYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNV--TWTTML 305
Query: 208 GACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGE 251
+E A ++L+ +K + ++ L+S Y + G+
Sbjct: 306 DGYAISEDYE----AAREVLNSMPQKDIVAWNALIS-AYEQNGK 344
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 115/311 (36%), Positives = 185/311 (59%), Gaps = 7/311 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+GY+QNGL + + V P+ TL S+L +C+ G+ ++ +
Sbjct: 228 VISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNG 287
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
NV+ A + Y++ G ++ A VF+ MP K+ V++T M+ YG HGMG L L+D
Sbjct: 288 FVPNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFD 347
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M++ GI+PD FV +LSACS++GL D+GLE+F +M + +K++P EHY C+ D+LGR
Sbjct: 348 DMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRA 407
Query: 181 GRVVEAYEFVKQLG--EDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
GR+ EA EF++ + DG V WG++LGACK H ++ ++ K++ E E GY
Sbjct: 408 GRLDEAMEFIESMPVEPDGAV---WGALLGACKIHKNVDMAELAFAKVI--EFEPNNIGY 462
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEI 298
+VL+SNIY++ E + R+R + E+ K+ G S VE G V+ F++ D H Q+ E+
Sbjct: 463 YVLMSNIYSDSKNQEGIWRIRVMMRERAFRKKPGYSYVEHKGRVHLFLAGDRSHEQTEEV 522
Query: 299 YDILDKLTMDI 309
+ +LD+L +
Sbjct: 523 HRMLDELETSV 533
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 105/227 (46%), Gaps = 3/227 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+GYT N A R V ++VT+ ++P C+ + LHG ++
Sbjct: 127 LISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGG 186
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+D V + + Y K G++ +F+ MP K +T+ ++ Y Q+G+ L LY+
Sbjct: 187 LDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYE 246
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M SG+ PD V++LS+C++ G G E+ + +V+ + P+ M R
Sbjct: 247 QMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGK-LVESNGFVPNVFVSNASISMYARC 305
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLL 227
G + +A + V W +++G HG E+G ++ + ++
Sbjct: 306 GNLAKARAVFDIMPVKSLVS--WTAMIGCYGMHGMGEIGLMLFDDMI 350
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 2/135 (1%)
Query: 10 LNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGT 69
L ++I R L P+A + IL +C+S QLH + + + T
Sbjct: 33 LFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLT 92
Query: 70 ALVDTYSKSGAISYAENVFNRMPEKN--SVTYTTMMMSYGQHGMGRRALTLYDSMLRSGI 127
AL+ Y K G ++ A VF P+ + SV Y ++ Y + A ++ M +G+
Sbjct: 93 ALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGV 152
Query: 128 KPDAVAFVAILSACS 142
D+V + ++ C+
Sbjct: 153 SVDSVTMLGLVPLCT 167
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 184/311 (59%), Gaps = 3/311 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+ Y++N L E +I L + P++V+++S+L A SST S+ LHG+++R
Sbjct: 548 MISCYSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLG 607
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + + AL+D Y K G YAEN+F +M K+ +T+ M+ YG HG AL+L+D
Sbjct: 608 IPSDTHLKNALIDMYVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFD 667
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M ++G PD V F++++SAC+++G V+EG IFE M + + I+P+ EHY + D+LGR
Sbjct: 668 EMKKAGESPDDVTFLSLISACNHSGFVEEGKNIFEFMKQDYGIEPNMEHYANMVDLLGRA 727
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + EAY F+K + + + IW +L A + H ELG + AEKLL ME E+ +V
Sbjct: 728 GLLEEAYSFIKAMPIEADS-SIWLCLLSASRTHHNVELGILSAEKLLRMEPER--GSTYV 784
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
L N+Y E G ++ + EKGLHK+ GCS +E+ N F S P EI++
Sbjct: 785 QLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGCSWIEVSDRTNVFFSGGSSSPMKAEIFN 844
Query: 301 ILDKLTMDIKD 311
+L++L ++ D
Sbjct: 845 VLNRLKSNMVD 855
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 107/225 (47%), Gaps = 4/225 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI G+ +G+ E ++ A + V + + + L ACS + + F Q+H ++
Sbjct: 243 MIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMG 302
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + Y T+L+ YSK G + AE VF+ + +K + M+ +Y ++ G AL L+
Sbjct: 303 LHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFG 362
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M + + PD+ ++S CS GL + G + + K I+ ++ + + +
Sbjct: 363 FMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFK-RPIQSTSTIESALLTLYSKC 421
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSIL-GACKNHGYFELGKVVAE 224
G +AY K + E M WGS++ G CKN + E KV +
Sbjct: 422 GCDPDAYLVFKSMEEKD--MVAWGSLISGLCKNGKFKEALKVFGD 464
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 80/144 (55%), Gaps = 2/144 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLH--KVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
+I+G +NG ++A+ + + P++ ++S+ AC+ ++ F Q+HG I+
Sbjct: 445 LISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIK 504
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+ NV+ G++L+D YSK G A VF M +N V + +M+ Y ++ + ++ L
Sbjct: 505 TGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDL 564
Query: 119 YDSMLRSGIKPDAVAFVAILSACS 142
++ ML GI PD+V+ ++L A S
Sbjct: 565 FNLMLSQGIFPDSVSITSVLVAIS 588
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 112/250 (44%), Gaps = 14/250 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAF--ATQLHGFSIR 58
MI GY + ++ + R L+ V P+A +LS ++ G+ Q+HGF +R
Sbjct: 139 MIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLR 198
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK-NSVTYTTMMMSYGQHGMGRRALT 117
+ +D + + TAL+D Y K G A VF + +K N V + M++ +G G+ +L
Sbjct: 199 NSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLD 258
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVA--D 175
LY + +K + +F L ACS + G +I +V K+ + Y C +
Sbjct: 259 LYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVV---KMGLHNDPYVCTSLLS 315
Query: 176 MLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRV 235
M + G V EA E V D +EIW +++ A + Y A L +K V
Sbjct: 316 MYSKCGMVGEA-ETVFSCVVDKR-LEIWNAMVAAYAENDY----GYSALDLFGFMRQKSV 369
Query: 236 AGYHVLLSNI 245
LSN+
Sbjct: 370 LPDSFTLSNV 379
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 2/161 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M+A Y +N A+ V+P++ TLS+++ CS G + +H +
Sbjct: 344 MVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRP 403
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ +AL+ YSK G A VF M EK+ V + +++ ++G + AL ++
Sbjct: 404 IQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFG 463
Query: 121 SML--RSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
M +KPD+ ++ +AC+ + GL++ SM+K
Sbjct: 464 DMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIK 504
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 84/181 (46%), Gaps = 11/181 (6%)
Query: 32 TLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRM 91
T S+L ACS+ ++++ +HG + + + T+LV+ Y K G + YA VF+
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 92 PEKNS-------VTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYA 144
+ S + +M+ Y + + + + ML G++PDA + ++S
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 145 GLV--DEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEI 202
G +EG +I M++ + + + + DM + G ++A+ ++ + NV+ +
Sbjct: 182 GNFRREEGKQIHGFMLR-NSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVV-L 239
Query: 203 W 203
W
Sbjct: 240 W 240
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/317 (37%), Positives = 184/317 (58%), Gaps = 7/317 (2%)
Query: 1 MIAGYTQNG-LNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR- 58
MI+GY+ N L+E+A+ + R+ P+ + + ACS+ S + Q+HG +I+
Sbjct: 315 MISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKS 374
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
H + AL+ Y KSG + A VF+RMPE N+V++ M+ Y QHG G AL L
Sbjct: 375 HIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLL 434
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
Y ML SGI P+ + FVA+LSAC++ G VDEG E F +M + KI+P EHY C+ D+LG
Sbjct: 435 YQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLG 494
Query: 179 RVGRVVEAYEFVKQLG-EDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAG 237
R G++ EA F+ + + G+V W ++LGAC+ H L + A +L+ M+ A
Sbjct: 495 RAGKLEEAERFIDAMPYKPGSV--AWAALLGACRKHKNMALAERAANELMVMQP--LAAT 550
Query: 238 YHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGE 297
+V+L+N+YA+ +WE + VR + K + K+ GCS +E+ + FV+ D HP E
Sbjct: 551 PYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIRE 610
Query: 298 IYDILDKLTMDIKDAGY 314
+ + L+++ +K GY
Sbjct: 611 VNEYLEEMMKKMKKVGY 627
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 4/146 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI Y Q+ KA+ +E + + TL+S+L A +S + Q HG I+
Sbjct: 211 MIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAG 270
Query: 61 MDQNVYAGTALVDTYSKSGAIS---YAENVFNRMPEKNSVTYTTMMMSYGQH-GMGRRAL 116
QN + G+ L+D YSK G +E VF + + V + TM+ Y + + A+
Sbjct: 271 FHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSEEAV 330
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACS 142
+ M R G +PD +FV + SACS
Sbjct: 331 KSFRQMQRIGHRPDDCSFVCVTSACS 356
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+GY A++ + + TLS ++ AC + QLH FS+
Sbjct: 111 LISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDR--VDLIKQLHCFSVSGG 168
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPE-KNSVTYTTMMMSYGQHGMGRRALTLY 119
D A V YSK G + A +VF M E ++ V++ +M+++YGQH G +AL LY
Sbjct: 169 FDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALY 228
Query: 120 DSMLRSGIKPDAVAFVAILSA 140
M+ G K D ++L+A
Sbjct: 229 KEMIFKGFKIDMFTLASVLNA 249
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 222 bits (565), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 121/326 (37%), Positives = 197/326 (60%), Gaps = 8/326 (2%)
Query: 1 MIAGYTQNGLNEKAI-LTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+I+G++QNG +A+ + L V PN +T+ S+LPAC++ G + +L G++ +
Sbjct: 185 VISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYAREN 244
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRM-PEKNSVTYTTMMMSYGQHGMGRRALTL 118
N+Y A ++ YSK G I A+ +F + ++N ++ +M+ S HG ALTL
Sbjct: 245 GFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEALTL 304
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+ MLR G KPDAV FV +L AC + G+V +G E+F+SM ++HKI P EHY C+ D+LG
Sbjct: 305 FAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMIDLLG 364
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
RVG++ EAY+ +K + + + +WG++LGAC HG E+ ++ +E L +E G
Sbjct: 365 RVGKLQEAYDLIKTMPMKPDAV-VWGTLLGACSFHGNVEIAEIASEALFKLEPTN--PGN 421
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCS-LVEIGGLVNYFVSRDEKHPQSGE 297
V++SNIYA +W+ V R+R + ++ + K G S VE+G V+ F D+ HP+S E
Sbjct: 422 CVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYFVEVGVDVHKFTVEDKSHPRSYE 481
Query: 298 IYDILDKLTMDIKDAGYKTRYNSSLN 323
IY +L+++ +K K+R++S L
Sbjct: 482 IYQVLEEIFRRMKLE--KSRFDSLLQ 505
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 80/198 (40%), Gaps = 40/198 (20%)
Query: 52 LHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGM 111
LH R + + + T L+ Y+K GA+ A VF+ M +++ + M+ Y + G
Sbjct: 104 LHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGD 163
Query: 112 GRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPS----- 166
+ A+ L+DSM R + ++ ++S S G E L++F M K +KP+
Sbjct: 164 MKAAMELFDSMPRKNV----TSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVV 219
Query: 167 ----------------------------TEHYCCVA--DMLGRVGRVVEAYEFVKQLGED 196
Y C A +M + G + A ++LG
Sbjct: 220 SVLPACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQ 279
Query: 197 GNVMEIWGSILGACKNHG 214
N+ W S++G+ HG
Sbjct: 280 RNLCS-WNSMIGSLATHG 296
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 221 bits (564), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 112/315 (35%), Positives = 191/315 (60%), Gaps = 4/315 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G+ +NG E+A+ E + P+ T+ S+L AC+ G++ ++H + I+
Sbjct: 60 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 119
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ +N+++ L+D Y++ G + A+ +F+ M +KNSV++T++++ +G G+ A+ L+
Sbjct: 120 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 179
Query: 121 SMLRS-GIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M + G+ P + FV IL ACS+ G+V EG E F M + +KI+P EH+ C+ D+L R
Sbjct: 180 YMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 239
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G+V +AYE++K + NV+ IW ++LGAC HG +L + ++L +E +G +
Sbjct: 240 AGQVKKAYEYIKSMPMQPNVV-IWRTLLGACTVHGDSDLAEFARIQILQLEPNH--SGDY 296
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
VLLSN+YA E W +V ++R Q+ G+ K G SLVE+G V+ F+ D+ HPQS IY
Sbjct: 297 VLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIY 356
Query: 300 DILDKLTMDIKDAGY 314
L ++T ++ GY
Sbjct: 357 AKLKEMTGRLRSEGY 371
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 89/188 (47%), Gaps = 6/188 (3%)
Query: 44 GSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMM 103
+ +H IR +Y +L+ Y+ G ++ A VF++MPEK+ V + +++
Sbjct: 2 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 61
Query: 104 MSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKI 163
+ ++G AL LY M GIKPD V++LSAC+ G + G + M+K+ +
Sbjct: 62 NGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV-GL 120
Query: 164 KPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVA 223
+ + D+ R GRV EA ++ + +V W S++ +G+ GK
Sbjct: 121 TRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVS--WTSLIVGLAVNGF---GKEAI 175
Query: 224 EKLLSMET 231
E ME+
Sbjct: 176 ELFKYMES 183
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 221 bits (564), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 112/315 (35%), Positives = 191/315 (60%), Gaps = 4/315 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G+ +NG E+A+ E + P+ T+ S+L AC+ G++ ++H + I+
Sbjct: 193 VINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVG 252
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ +N+++ L+D Y++ G + A+ +F+ M +KNSV++T++++ +G G+ A+ L+
Sbjct: 253 LTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFK 312
Query: 121 SMLRS-GIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M + G+ P + FV IL ACS+ G+V EG E F M + +KI+P EH+ C+ D+L R
Sbjct: 313 YMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLAR 372
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G+V +AYE++K + NV+ IW ++LGAC HG +L + ++L +E +G +
Sbjct: 373 AGQVKKAYEYIKSMPMQPNVV-IWRTLLGACTVHGDSDLAEFARIQILQLEPNH--SGDY 429
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
VLLSN+YA E W +V ++R Q+ G+ K G SLVE+G V+ F+ D+ HPQS IY
Sbjct: 430 VLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIY 489
Query: 300 DILDKLTMDIKDAGY 314
L ++T ++ GY
Sbjct: 490 AKLKEMTGRLRSEGY 504
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 7/232 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVI-PNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+I GY + G + A RE + ++ P+ T ++ A ++ + +H IR
Sbjct: 91 LIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVIRS 150
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+Y +L+ Y+ G ++ A VF++MPEK+ V + +++ + ++G AL LY
Sbjct: 151 GFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALALY 210
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M GIKPD V++LSAC+ G + G + M+K+ + + + D+ R
Sbjct: 211 TEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV-GLTRNLHSSNVLLDLYAR 269
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMET 231
GRV EA ++ + +V W S++ +G+ GK E ME+
Sbjct: 270 CGRVEEAKTLFDEMVDKNSVS--WTSLIVGLAVNGF---GKEAIELFKYMES 316
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 221 bits (563), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 118/328 (35%), Positives = 193/328 (58%), Gaps = 4/328 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI GY +N EKAI V+ N + S++ +C+ G++ F + + + ++
Sbjct: 220 MINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSH 279
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
M N+ GTALVD + + G I A +VF +PE +S+++++++ HG +A+ +
Sbjct: 280 MTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFS 339
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+ G P V F A+LSACS+ GLV++GLEI+E+M K H I+P EHY C+ DMLGR
Sbjct: 340 QMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRA 399
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G++ EA F+ ++ N I G++LGACK + E+ + V L+ ++ E +GY+V
Sbjct: 400 GKLAEAENFILKMHVKPNA-PILGALLGACKIYKNTEVAERVGNMLIKVKPEH--SGYYV 456
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYF-VSRDEKHPQSGEIY 299
LLSNIYA G+W+ ++ +R+ + EK + K G SL+EI G +N F + D+KHP+ G+I
Sbjct: 457 LLSNIYACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIR 516
Query: 300 DILDKLTMDIKDAGYKTRYNSSLNEIVE 327
+++ I+ GYK + ++ E
Sbjct: 517 RKWEEILGKIRLIGYKGNTGDAFFDVDE 544
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/274 (20%), Positives = 113/274 (41%), Gaps = 34/274 (12%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I ++ KA + L ++ P+ +T ++ A S + Q H +R
Sbjct: 88 LIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFG 147
Query: 61 MDQNVY-------------------------------AGTALVDTYSKSGAISYAENVFN 89
+VY + T++V Y K G + A +F+
Sbjct: 148 FQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFD 207
Query: 90 RMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDE 149
MP +N T++ M+ Y ++ +A+ L++ M R G+ + V+++S+C++ G ++
Sbjct: 208 EMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEF 267
Query: 150 GLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGA 209
G +E +VK H + + + DM R G + +A + L E ++ W SI+
Sbjct: 268 GERAYEYVVKSH-MTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLS--WSSIIKG 324
Query: 210 CKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLS 243
HG+ +++S+ R + +LS
Sbjct: 325 LAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLS 358
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 221 bits (562), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 113/312 (36%), Positives = 187/312 (59%), Gaps = 6/312 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IAGY Q+ +K +L E L V PN TLSS+L AC+ G++ ++H + I++
Sbjct: 277 LIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNS 336
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ N AGT L+D Y K G + A VF R+ EKN T+T M+ + HG R A L+
Sbjct: 337 IEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFY 396
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
+ML S + P+ V F+A+LSAC++ GLV+EG +F SM ++P +HY C+ D+ GR
Sbjct: 397 TMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRK 456
Query: 181 GRVVEAYEFVKQLG-EDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G + EA ++++ E NV +WG++ G+C H +ELGK A +++ ++ +G +
Sbjct: 457 GLLEEAKALIERMPMEPTNV--VWGALFGSCLLHKDYELGKYAASRVIKLQPSH--SGRY 512
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHP-QSGEI 298
LL+N+Y+E W+ V RVR Q+ ++ + K G S +E+ G + F++ D+K P +S ++
Sbjct: 513 TLLANLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIEVKGKLCEFIAFDDKKPLESDDL 572
Query: 299 YDILDKLTMDIK 310
Y LD + + ++
Sbjct: 573 YKTLDTVGVQMR 584
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 108/216 (50%), Gaps = 4/216 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH- 59
MI G+ +NG +A++ E V N +T+ S+L A + F +HG +
Sbjct: 175 MIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETG 234
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ +V+ G++LVD Y K A+ VF+ MP +N VT+T ++ Y Q + + ++
Sbjct: 235 RVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVF 294
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
+ ML+S + P+ ++LSAC++ G + G + M+K + I+ +T + D+ +
Sbjct: 295 EEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIK-NSIEINTTAGTTLIDLYVK 353
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGY 215
G + EA ++L E + W +++ HGY
Sbjct: 354 CGCLEEAILVFERLHEKN--VYTWTAMINGFAAHGY 387
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 96/219 (43%), Gaps = 4/219 (1%)
Query: 10 LNEK-AILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAG 68
LN + + L R + VIP+ T +L A + Q H ++ +D + +
Sbjct: 83 LNRRLSFLAYRHMRRNGVIPSRHTFPPLLKAVFKLRD-SNPFQFHAHIVKFGLDSDPFVR 141
Query: 69 TALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIK 128
+L+ YS SG +A +F+ +K+ VT+T M+ + ++G A+ + M ++G+
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVA 201
Query: 129 PDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYE 188
+ + V++L A V G + ++ ++K + DM G+ +A +
Sbjct: 202 ANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQK 261
Query: 189 FVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLL 227
++ V W +++ F+ G +V E++L
Sbjct: 262 VFDEMPSRNVV--TWTALIAGYVQSRCFDKGMLVFEEML 298
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 219 bits (559), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/317 (38%), Positives = 187/317 (58%), Gaps = 6/317 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GY N L KA+ + L ++ +++L A +S ++ ++H S+R
Sbjct: 590 MISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRAC 649
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ +V G+ALVD YSK G + YA FN MP +NS ++ +M+ Y +HG G AL L++
Sbjct: 650 LESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFE 709
Query: 121 SMLRSG-IKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
+M G PD V FV +LSACS+AGL++EG + FESM + + P EH+ C+AD+LGR
Sbjct: 710 TMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGR 769
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGAC--KNHGYFELGKVVAEKLLSMETEKRVAG 237
G + + +F++++ NV+ IW ++LGAC N ELGK AE L +E E V
Sbjct: 770 AGELDKLEDFIEKMPMKPNVL-IWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVN- 827
Query: 238 YHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGE 297
+VLL N+YA G WE++ + R ++ + + KE G S V + V+ FV+ D+ HP +
Sbjct: 828 -YVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADV 886
Query: 298 IYDILDKLTMDIKDAGY 314
IY L +L ++DAGY
Sbjct: 887 IYKKLKELNRKMRDAGY 903
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 84/167 (50%), Gaps = 8/167 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGS--IAFATQLHGFSIR 58
+++GY++NG +++A++ LR+ + + N S+L AC GS I F Q+HG +
Sbjct: 73 IVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFK 132
Query: 59 HFMDQNVYAGTALVDTYSKS-GAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
+ L+ Y K G++ YA F + KNSV++ +++ Y Q G R A
Sbjct: 133 LSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFR 192
Query: 118 LYDSMLRSGIKPDAVAFVAIL-SACSYAGLVDEGLEIFES-MVKIHK 162
++ SM G +P F +++ +ACS L + + + E M I K
Sbjct: 193 IFSSMQYDGSRPTEYTFGSLVTTACS---LTEPDVRLLEQIMCTIQK 236
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 70/135 (51%), Gaps = 1/135 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI G QNG +A+ + H ++P + TL S L +C+S Q+HG S++
Sbjct: 386 MITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG 445
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMG-RRALTLY 119
+D NV AL+ Y+++G ++ +F+ MPE + V++ +++ + + A+ +
Sbjct: 446 IDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCF 505
Query: 120 DSMLRSGIKPDAVAF 134
+ R+G K + + F
Sbjct: 506 LNAQRAGQKLNRITF 520
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 27 IPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAEN 86
+ N V LS + G+ F H ++ +D++VY L++ Y ++G A
Sbjct: 1 MTNCVPLSFVQSCVGHRGAARF---FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARK 57
Query: 87 VFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGL 146
VF+ MP +N V++ ++ Y ++G + AL M++ GI + AFV++L AC G
Sbjct: 58 VFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGS 117
Query: 147 V 147
V
Sbjct: 118 V 118
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 14/192 (7%)
Query: 29 NAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVF 88
N +T SS+L A SS Q+HG ++++ + AL+ Y K G + E +F
Sbjct: 516 NRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIF 575
Query: 89 NRMPE-KNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLV 147
+RM E +++VT+ +M+ Y + + +AL L ML++G + D+ + +LSA + +
Sbjct: 576 SRMAERRDNVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATL 635
Query: 148 DEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEI----- 202
+ G+E+ V+ ++ + DM + GR+ A F N M +
Sbjct: 636 ERGMEVHACSVRAC-LESDVVVGSALVDMYSKCGRLDYALRFF-------NTMPVRNSYS 687
Query: 203 WGSILGACKNHG 214
W S++ HG
Sbjct: 688 WNSMISGYARHG 699
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 4/160 (2%)
Query: 51 QLHGFSIRH-FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQH 109
++HG I +D V G LV+ Y+K G+I+ A VF M +K+SV++ +M+ Q+
Sbjct: 334 EVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQN 393
Query: 110 GMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEH 169
G A+ Y SM R I P + ++ LS+C+ G +I +K+ I +
Sbjct: 394 GCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKL-GIDLNVSV 452
Query: 170 YCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGA 209
+ + G + E + + E V W SI+GA
Sbjct: 453 SNALMTLYAETGYLNECRKIFSSMPEHDQVS--WNSIIGA 490
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 3/151 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILP-ACSST-GSIAFATQLHGFSIR 58
+I+ Y+Q G A P T S++ ACS T + Q+ +
Sbjct: 177 IISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQK 236
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+ +++ G+ LV ++KSG++SYA VFN+M +N+VT +M+ + G A L
Sbjct: 237 SGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKL 296
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDE 149
+ M S I ++V +LS+ L +E
Sbjct: 297 FMDM-NSMIDVSPESYVILLSSFPEYSLAEE 326
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/329 (35%), Positives = 187/329 (56%), Gaps = 5/329 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I + +NG +A+ V P TL SIL C+S S+ Q+H +R
Sbjct: 302 VIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQ 361
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
D +VY + L+ Y K G + ++ +F+R P K+ + + +++ Y HG+G AL ++
Sbjct: 362 FDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFC 421
Query: 121 SMLRSG-IKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M SG KP+ V FVA LSACSYAG+V+EGL+I+ESM + +KP T HY C+ DMLGR
Sbjct: 422 EMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGR 481
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
GR EA E + + + + +WGS+LGAC+ H ++ + A+KL+ +E E +G +
Sbjct: 482 AGRFNEAMEMIDSMTVEPDA-AVWGSLLGACRTHSQLDVAEFCAKKLIEIEPEN--SGTY 538
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRD-EKHPQSGEI 298
+LLSN+YA +G W +V +R + + + K GCS E+ V+ F HP+ I
Sbjct: 539 ILLSNMYASQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESI 598
Query: 299 YDILDKLTMDIKDAGYKTRYNSSLNEIVE 327
ILD+L +++AGY + +L+++ E
Sbjct: 599 LKILDELDGLLREAGYNPDCSYALHDVDE 627
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 26/266 (9%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M+AGY N + A R+ N ++ + ++ G I A ++
Sbjct: 54 MVAGYFANLMPRDA----RKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDL----M 105
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++NV + TALV Y +G + AE++F +MPEKN V++T M++ + Q G A LY+
Sbjct: 106 PERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYE 165
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
+ D +A +++ G VDE EIF+ M + I +T + G+
Sbjct: 166 MI----PDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTT-----MVTGYGQN 216
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVV-AEKLLSMETEKRVAGYH 239
RV +A + + E V W S+L GY + G++ AE+L + K V +
Sbjct: 217 NRVDDARKIFDVMPEKTEVS--WTSML-----MGYVQNGRIEDAEELFEVMPVKPVIACN 269
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEK 265
++S + ++GE RV + + E+
Sbjct: 270 AMISGL-GQKGEIAKARRVFDSMKER 294
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 106/246 (43%), Gaps = 16/246 (6%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNA--VTLSSILPACSSTGSIAFATQLHGFSIR 58
M+ GY QN + A + V+P V+ +S+L G I A +L F +
Sbjct: 209 MVTGYGQNNRVDDA------RKIFDVMPEKTEVSWTSMLMGYVQNGRIEDAEEL--FEVM 260
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+ V A A++ + G I+ A VF+ M E+N ++ T++ + ++G AL L
Sbjct: 261 PV--KPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDL 318
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+ M + G++P ++ILS C+ + G ++ +V+ + + M
Sbjct: 319 FILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRC-QFDVDVYVASVLMTMYI 377
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELG-KVVAEKLLSMETEKRVAG 237
+ G +V++ + +M W SI+ +HG E KV E LS T+
Sbjct: 378 KCGELVKSKLIFDRFPSKDIIM--WNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVT 435
Query: 238 YHVLLS 243
+ LS
Sbjct: 436 FVATLS 441
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 104/280 (37%), Positives = 176/280 (62%), Gaps = 3/280 (1%)
Query: 35 SILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK 94
S L AC++TG++ +HGF +R+ + N+ T+LVD Y K G + A ++F +M ++
Sbjct: 239 SALLACANTGALNLGMSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKR 298
Query: 95 NSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIF 154
N++TY+ M+ HG G AL ++ M++ G++PD V +V++L+ACS++GLV EG +F
Sbjct: 299 NNLTYSAMISGLALHGEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVF 358
Query: 155 ESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
M+K K++P+ EHY C+ D+LGR G + EA E ++ + + N + IW + L C+
Sbjct: 359 AEMLKEGKVEPTAEHYGCLVDLLGRAGLLEEALETIQSIPIEKNDV-IWRTFLSQCRVRQ 417
Query: 215 YFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCS 274
ELG++ A++LL + + G ++L+SN+Y++ W++V R R +I KGL + G S
Sbjct: 418 NIELGQIAAQELLKLSSHN--PGDYLLISNLYSQGQMWDDVARTRTEIAIKGLKQTPGFS 475
Query: 275 LVEIGGLVNYFVSRDEKHPQSGEIYDILDKLTMDIKDAGY 314
+VE+ G + FVS+D HP+ EIY +L ++ +K GY
Sbjct: 476 IVELKGKTHRFVSQDRSHPKCKEIYKMLHQMEWQLKFEGY 515
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 74/154 (48%), Gaps = 1/154 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI GY E+A+ E + P+ T +L AC+ SI Q+HG +
Sbjct: 103 MIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTRLKSIREGKQIHGQVFKLG 162
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ +V+ +L++ Y + G + + VF ++ K + ++++M+ + GM L L+
Sbjct: 163 LEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSMVSARAGMGMWSECLLLFR 222
Query: 121 SML-RSGIKPDAVAFVAILSACSYAGLVDEGLEI 153
M + +K + V+ L AC+ G ++ G+ I
Sbjct: 223 GMCSETNLKAEESGMVSALLACANTGALNLGMSI 256
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 113/315 (35%), Positives = 179/315 (56%), Gaps = 3/315 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++ G QNG E+AI L V +A +S++L S+ QLH I+
Sbjct: 328 ILVGLAQNGSEEEAIQFFIRMLQAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRK 387
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
N + L++ YSK G ++ ++ VF RMP++N V++ +M+ ++ +HG G AL LY+
Sbjct: 388 FSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYE 447
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M +KP V F+++L ACS+ GL+D+G E+ M ++H I+P TEHY C+ DMLGR
Sbjct: 448 EMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRA 507
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + EA F+ L + +IW ++LGAC HG E+G+ AE+L +T + H+
Sbjct: 508 GLLKEAKSFIDSLPLKPDC-KIWQALLGACSFHGDTEVGEYAAEQLF--QTAPDSSSAHI 564
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
L++NIY+ G+W+ + ++ G+ KE G S +EI + FV D+ HPQ+ IYD
Sbjct: 565 LIANIYSSRGKWKERAKTIKRMKAMGVTKETGISSIEIEHKTHSFVVEDKLHPQAEAIYD 624
Query: 301 ILDKLTMDIKDAGYK 315
+L L + D GY+
Sbjct: 625 VLSGLFPVMVDEGYR 639
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 117/248 (47%), Gaps = 15/248 (6%)
Query: 1 MIAGYTQNGLNEKAILT---LREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSI 57
+I+G +N L+E + +R L+H PN+VT S L ACS + I Q+H
Sbjct: 227 VISGLIENELHEDGLRLFSLMRRGLVH---PNSVTYLSALAACSGSQRIVEGQQIHALLW 283
Query: 58 RHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
++ ++ + +AL+D YSK G+I A +F E + V+ T +++ Q+G A+
Sbjct: 284 KYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVILVGLAQNGSEEEAIQ 343
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEI---FESMVKIHKIKPSTEHYCCVA 174
+ ML++G++ DA A+L +D L + S+V K +T +
Sbjct: 344 FFIRMLQAGVEIDANVVSAVLG----VSFIDNSLGLGKQLHSLVIKRKFSGNTFVNNGLI 399
Query: 175 DMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKR 234
+M + G + ++ +++ + V W S++ A HG+ + E++ ++E +
Sbjct: 400 NMYSKCGDLTDSQTVFRRMPKRNYVS--WNSMIAAFARHGHGLAALKLYEEMTTLEVKPT 457
Query: 235 VAGYHVLL 242
+ LL
Sbjct: 458 DVTFLSLL 465
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 189/327 (57%), Gaps = 3/327 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+ Y ++ ++A+ E + P+ V++ S++ AC++ G + A +H +
Sbjct: 315 MISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNG 374
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ + AL++ Y+K G + +VF +MP +N V++++M+ + HG AL+L+
Sbjct: 375 LESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFA 434
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M + ++P+ V FV +L CS++GLV+EG +IF SM + I P EHY C+ D+ GR
Sbjct: 435 RMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRA 494
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
+ EA E ++ + NV+ IWGS++ AC+ HG ELGK A+++L +E + G V
Sbjct: 495 NLLREALEVIESMPVASNVV-IWGSLMSACRIHGELELGKFAAKRILELEPDH--DGALV 551
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
L+SNIYA E WE+V +R + EK + KE G S ++ G + F+ D++H QS EIY
Sbjct: 552 LMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYA 611
Query: 301 ILDKLTMDIKDAGYKTRYNSSLNEIVE 327
LD++ +K AGY S L ++ E
Sbjct: 612 KLDEVVSKLKLAGYVPDCGSVLVDVEE 638
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 115/245 (46%), Gaps = 34/245 (13%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSI--- 57
MI Y + GL ++A E V+P+ + L +I+ AC TG++ + ++ F I
Sbjct: 183 MIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEND 242
Query: 58 ------------------------RHFMDQ----NVYAGTALVDTYSKSGAISYAENVFN 89
R F + N++ TA+V YSK G + A+ +F+
Sbjct: 243 VRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFD 302
Query: 90 RMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDE 149
+ +K+ V +TTM+ +Y + + AL +++ M SGIKPD V+ +++SAC+ G++D+
Sbjct: 303 QTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDK 362
Query: 150 GLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGA 209
+ S + ++ ++ + +M + G + + +++ V W S++ A
Sbjct: 363 AKWV-HSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVS--WSSMINA 419
Query: 210 CKNHG 214
HG
Sbjct: 420 LSMHG 424
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 107/236 (45%), Gaps = 8/236 (3%)
Query: 36 ILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKN 95
IL A S ++ +LHG + + + + T +D Y+ G I+YA NVF+ M ++
Sbjct: 117 ILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRD 176
Query: 96 SVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFE 155
VT+ TM+ Y + G+ A L++ M S + PD + I+SAC G + I+E
Sbjct: 177 VVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYE 236
Query: 156 SMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGY 215
+++ + ++ T + M G + A EF ++ M + + GY
Sbjct: 237 FLIE-NDVRMDTHLLTALVTMYAGAGCMDMAREFFRK-------MSVRNLFVSTAMVSGY 288
Query: 216 FELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEM 271
+ G++ +++ +TEK+ + + Y E + RV ++ G+ ++
Sbjct: 289 SKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDV 344
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 118/324 (36%), Positives = 180/324 (55%), Gaps = 3/324 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+GY QN NE+A++ R +IPN T++S+L ACSS ++ Q+HG +I+H
Sbjct: 394 LISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIKHG 453
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
V G+AL YSK G++ VF R P K+ V++ M+ +G G AL L++
Sbjct: 454 FGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVSWNAMISGLSHNGQGDEALELFE 513
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
ML G++PD V FV I+SACS+ G V+ G F M + P +HY C+ D+L R
Sbjct: 514 EMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRA 573
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G++ EA EF++ D + +W +L ACKNHG ELG EKL+++ + R + +V
Sbjct: 574 GQLKEAKEFIESANIDHGLC-LWRILLSACKNHGKCELGVYAGEKLMALGS--RESSTYV 630
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LS IY G +V+RV + G+ KE+GCS +E+ + FV D HP E D
Sbjct: 631 QLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIELKNQYHVFVVGDTMHPMIEETKD 690
Query: 301 ILDKLTMDIKDAGYKTRYNSSLNE 324
++ ++ + + G+ T +SS E
Sbjct: 691 LVCLVSRQMIEEGFVTVLDSSFVE 714
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 85/159 (53%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M+ GY+QNG + +A+ + P+ T+ +L ACS + QLH F ++
Sbjct: 293 MVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLG 352
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+++++A TALVD Y+K+G ++ A F+ + E++ +T+++ Y Q+ AL LY
Sbjct: 353 FERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYR 412
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
M +GI P+ ++L ACS ++ G ++ +K
Sbjct: 413 RMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIK 451
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 127/289 (43%), Gaps = 42/289 (14%)
Query: 1 MIAGYTQNG---LNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSI 57
+I GY+QNG + + RE ++PNA TL+ I A SS S Q H +
Sbjct: 86 LITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVV 145
Query: 58 RHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
+ ++Y T+LV Y K+G + VF MPE+N+ T++TM+ Y G A+
Sbjct: 146 KMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIK 205
Query: 118 LYDSMLR---SGIKPDAVAFVAILSACS---YAGL--------VDEGLEIF----ESMVK 159
+++ LR G D V F A+LS+ + Y GL + GL F ++V
Sbjct: 206 VFNLFLREKEEGSDSDYV-FTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVT 264
Query: 160 IHKIKPSTEHYCCVADMLG---------------RVGRVVEAYEFVKQLGEDG---NVME 201
++ S C + D G + G +EA + ++ G +
Sbjct: 265 MYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYT 324
Query: 202 IWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEG 250
I G +L AC + Y E GK + LL + E+ + L+ ++YA+ G
Sbjct: 325 IVG-VLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALV-DMYAKAG 371
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 107/215 (49%), Gaps = 17/215 (7%)
Query: 1 MIAGYTQNGLNEKAI----LTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFS 56
M++GY G E+AI L LRE + + +++L + ++T + Q+H +
Sbjct: 190 MVSGYATRGRVEEAIKVFNLFLREK--EEGSDSDYVFTAVLSSLAATIYVGLGRQIHCIT 247
Query: 57 IRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRAL 116
I++ + V ALV YSK +++ A +F+ ++NS+T++ M+ Y Q+G A+
Sbjct: 248 IKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAV 307
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKI----HKIKPSTEHYCC 172
L+ M +GIKP V +L+ACS ++EG ++ ++K+ H +
Sbjct: 308 KLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTA----- 362
Query: 173 VADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSIL 207
+ DM + G + +A + L E + +W S++
Sbjct: 363 LVDMYAKAGCLADARKGFDCLQERD--VALWTSLI 395
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 218 bits (555), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 116/316 (36%), Positives = 186/316 (58%), Gaps = 5/316 (1%)
Query: 11 NEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTA 70
+ +A+L + +PN T +S++ AC++ ++ QLHG R ++NV A
Sbjct: 294 SSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVELANA 353
Query: 71 LVDTYSKSGAISYAENVFNRMPEK-NSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKP 129
L+D Y+K G I ++ VF + ++ N V++T+MM+ YG HG G A+ L+D M+ SGI+P
Sbjct: 354 LIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSSGIRP 413
Query: 130 DAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEF 189
D + F+A+LSAC +AGLV++GL+ F M + I P + Y CV D+LGR G++ EAYE
Sbjct: 414 DRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGKIGEAYEL 473
Query: 190 VKQLGEDGNVMEIWGSILGACKNHGYFEL-GKVVAEKLLSMETEKRVAGYHVLLSNIYAE 248
V+++ + WG+ILGACK H + L ++ A K+ ME + ++ G +V+LS IYA
Sbjct: 474 VERMPFKPD-ESTWGAILGACKAHKHNGLISRLAARKV--MELKPKMVGTYVMLSYIYAA 530
Query: 249 EGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYDILDKLTMD 308
EG+W + RVR + G KE G S + + V F D+ P + +Y +L L +
Sbjct: 531 EGKWVDFARVRKMMRMMGNKKEAGMSWILVENQVFSFAVSDKMCPNASSVYSVLGLLIEE 590
Query: 309 IKDAGYKTRYNSSLNE 324
++AGY +S +N+
Sbjct: 591 TREAGYVPELDSLVND 606
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 97/208 (46%), Gaps = 4/208 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI GY + N +A E + PN TLSS+L +C + +A+ +HG ++
Sbjct: 82 MITGYASSNYNARAWECFHEMVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLG 141
Query: 61 MDQNVYAGTALVDTYSK-SGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
M+ ++Y A+++ Y+ S + A +F + KN VT+TT++ + G G L +Y
Sbjct: 142 MEGSLYVDNAMMNMYATCSVTMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMY 201
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
ML + + A + V G +I S++K + + + D+ R
Sbjct: 202 KQMLLENAEVTPYCITIAVRASASIDSVTTGKQIHASVIK-RGFQSNLPVMNSILDLYCR 260
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSIL 207
G + EA + ++ ED +++ W +++
Sbjct: 261 CGYLSEAKHYFHEM-EDKDLI-TWNTLI 286
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 218 bits (554), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 120/327 (36%), Positives = 189/327 (57%), Gaps = 3/327 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GY +N E + R L + PN+ LSS L CS ++ Q+H +
Sbjct: 255 MISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKST 314
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ +V A T+L+ Y K G + A +F M +K+ V + M+ Y QHG +AL L+
Sbjct: 315 LCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLFR 374
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+ + I+PD + FVA+L AC++AGLV+ G+ FESMV+ +K++P +HY C+ D+LGR
Sbjct: 375 EMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGRA 434
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G++ EA + ++ + + ++G++LGAC+ H EL + AEKLL + ++ AGY V
Sbjct: 435 GKLEEALKLIRSMPFRPHA-AVFGTLLGACRVHKNVELAEFAAEKLLQLNSQN-AAGY-V 491
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
L+NIYA + WE+V RVR ++ E + K G S +EI V++F S D HP+ I+
Sbjct: 492 QLANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHK 551
Query: 301 ILDKLTMDIKDAGYKTRYNSSLNEIVE 327
L +L +K AGYK +L+ + E
Sbjct: 552 KLKELEKKMKLAGYKPELEFALHNVEE 578
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 12/215 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI GY + G EKA RE + N V+ ++++ G + A+ H F +
Sbjct: 161 MITGYARRGEMEKA----RELFYSMMEKNEVSWNAMISGYIECGDLEKAS--HFFKVAPV 214
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMP-EKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ V A TA++ Y K+ + AE +F M KN VT+ M+ Y ++ L L+
Sbjct: 215 --RGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTWNAMISGYVENSRPEDGLKLF 272
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
+ML GI+P++ + L CS + G +I + + K T ++ M +
Sbjct: 273 RAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLIS-MYCK 331
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
G + +A++ + + + V W +++ HG
Sbjct: 332 CGELGDAWKLFEVMKKKDVVA--WNAMISGYAQHG 364
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 218 bits (554), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 116/329 (35%), Positives = 184/329 (55%), Gaps = 5/329 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++A Y QN +EKA + + V + +SS+L AC+ + +H +++
Sbjct: 281 LVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKAC 340
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+++ ++ G+ALVD Y K G I +E F+ MPEKN VT +++ Y G AL L++
Sbjct: 341 VERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFE 400
Query: 121 SMLRSGI--KPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
M G P+ + FV++LSACS AG V+ G++IF+SM + I+P EHY C+ DMLG
Sbjct: 401 EMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLG 460
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
R G V AYEF+K++ + +WG++ AC+ HG +LG + AE L ++ + +G
Sbjct: 461 RAGMVERAYEFIKKMPIQPTI-SVWGALQNACRMHGKPQLGLLAAENLFKLDPKD--SGN 517
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEI 298
HVLLSN +A G W + VR ++ G+ K G S + + V+ F ++D H + EI
Sbjct: 518 HVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEI 577
Query: 299 YDILDKLTMDIKDAGYKTRYNSSLNEIVE 327
L KL +++ AGYK SL ++ E
Sbjct: 578 QTTLAKLRNEMEAAGYKPDLKLSLYDLEE 606
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 11/203 (5%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
PN++T + L ACS + QLHG +R D +V L+D Y K I +E +
Sbjct: 207 PNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEII 266
Query: 88 FNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLV 147
F M KN+V++ +++ +Y Q+ +A LY + ++ ++LSAC AG+
Sbjct: 267 FTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSAC--AGMA 324
Query: 148 DEGLEIFESMVKIHKIKPSTEHYCCVA----DMLGRVGRVVEAYEFVKQLGEDGNVMEIW 203
GLE+ S + H +K E V DM G+ G + ++ + ++ E V
Sbjct: 325 --GLELGRS-IHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTR-- 379
Query: 204 GSILGACKNHGYFELGKVVAEKL 226
S++G + G ++ + E++
Sbjct: 380 NSLIGGYAHQGQVDMALALFEEM 402
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+G QNG A++ E V+PN T A +S Q+H +++
Sbjct: 79 LISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCG 138
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+V+ G + D Y K+ A +F+ +PE+N T+ + + G R A+ +
Sbjct: 139 RILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFI 198
Query: 121 SMLRSGIKPDAVAFVAILSACS 142
R P+++ F A L+ACS
Sbjct: 199 EFRRIDGHPNSITFCAFLNACS 220
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/331 (36%), Positives = 188/331 (56%), Gaps = 9/331 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GYT L ++A+L +E L PN VT+ SILPAC+ G+I +H + +
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRL 397
Query: 61 --MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+ T+L+D Y+K G I A VFN + K+ ++ M+ + HG + L
Sbjct: 398 KGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDL 457
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+ M + GI+PD + FV +LSACS++G++D G IF +M + +K+ P EHY C+ D+LG
Sbjct: 458 FSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMIDLLG 517
Query: 179 RVG--RVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVA 236
G + E + ++ DG IW S+L ACK HG ELG+ AE L+ +E E
Sbjct: 518 HSGLFKEAEEMINMMEMEPDG---VIWCSLLKACKMHGNVELGESFAENLIKIEPEN--P 572
Query: 237 GYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSG 296
G +VLLSNIYA G W V + R + +KG+ K GCS +EI +V+ F+ D+ HP++
Sbjct: 573 GSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNR 632
Query: 297 EIYDILDKLTMDIKDAGYKTRYNSSLNEIVE 327
EIY +L+++ + ++ AG+ + L E+ E
Sbjct: 633 EIYGMLEEMEVLLEKAGFVPDTSEVLQEMEE 663
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 110/215 (51%), Gaps = 3/215 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GY + G ++A+ ++ + V P+ T+ +++ AC+ +GSI Q+H + H
Sbjct: 237 MISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHG 296
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
N+ AL+D YSK G + A +F R+P K+ +++ T++ Y + + AL L+
Sbjct: 297 FGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQ 356
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK-IHKIKPSTEHYCCVADMLGR 179
MLRSG P+ V ++IL AC++ G +D G I + K + + ++ + DM +
Sbjct: 357 EMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAK 416
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
G + A++ + + W +++ HG
Sbjct: 417 CGDIEAAHQVFNSILHKS--LSSWNAMIFGFAMHG 449
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 82/158 (51%), Gaps = 5/158 (3%)
Query: 26 VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAE 85
++PN+ T +L +C+ + + Q+HG ++ D ++Y T+L+ Y ++G + A
Sbjct: 130 LLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAH 189
Query: 86 NVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAG 145
VF++ P ++ V+YT ++ Y G A L+D + +K D V++ A++S + G
Sbjct: 190 KVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEI---PVK-DVVSWNAMISGYAETG 245
Query: 146 LVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRV 183
E LE+F+ M+K + ++P V + G +
Sbjct: 246 NYKEALELFKDMMKTN-VRPDESTMVTVVSACAQSGSI 282
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 119/333 (35%), Positives = 193/333 (57%), Gaps = 8/333 (2%)
Query: 1 MIAGYTQNGLNEK--AILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
MI + QNGL EK A + + H+ P+ T ++L +C G + A +HG +
Sbjct: 206 MIVIHLQNGLAEKGLAYFNMSRRVGHE--PDQATFLAVLRSCEDMGVVRLAQGIHGLIMF 263
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
N TAL+D YSK G + + VF+ + +S+ +T M+ +Y HG GR A+
Sbjct: 264 GGFSGNKCITTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKH 323
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
++ M+ GI PD V F +L+ACS++GLV+EG FE+M K ++I P +HY C+ D+LG
Sbjct: 324 FELMVHYGISPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLG 383
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
R G + +AY +K++ + + +WG++LGAC+ + +LG AE+L E E R
Sbjct: 384 RSGLLQDAYGLIKEMPMEPSS-GVWGALLGACRVYKDTQLGTKAAERLF--ELEPRDGRN 440
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEI 298
+V+LSNIY+ G W++ R+RN + +KGL + GCS +E G ++ FV D HP+S +I
Sbjct: 441 YVMLSNIYSASGLWKDASRIRNLMKQKGLVRASGCSYIEHGNKIHKFVVGDWSHPESEKI 500
Query: 299 YDILDKLTMDIK-DAGYKTRYNSSLNEIVETVE 330
L ++ +K + GYK++ L+++ E V+
Sbjct: 501 QKKLKEIRKKMKSEMGYKSKTEFVLHDVGEDVK 533
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 106/222 (47%), Gaps = 15/222 (6%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKV--IPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
+I+GY+ G K L ++ +V PN VT S++ AC GS +HG ++
Sbjct: 103 LISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMK 162
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+ + V A ++ Y K+G ++ + +F + KN V++ TM++ + Q+G+ + L
Sbjct: 163 FGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAY 222
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVD-----EGLEIFESMVKIHKIKPSTEHYCCV 173
++ R G +PD F+A+L +C G+V GL +F I + +
Sbjct: 223 FNMSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTA------L 276
Query: 174 ADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGY 215
D+ ++GR+ ++ ++ ++ W ++L A HG+
Sbjct: 277 LDLYSKLGRLEDSSTVFHEITSPDSMA--WTAMLAAYATHGF 316
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 216 bits (551), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/314 (36%), Positives = 178/314 (56%), Gaps = 5/314 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI GY +NG E+A+ E + V + ++L ACS + +HG I
Sbjct: 308 MITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCG 367
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
Y G ALV+ Y+K G I A+ F + K+ V++ TM+ ++G HG+ +AL LYD
Sbjct: 368 FQGYAYVGNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYD 427
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
+M+ SGIKPD V F+ +L+ CS++GLV+EG IFESMVK ++I +H C+ DM GR
Sbjct: 428 NMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRG 487
Query: 181 GRVVEAYEFV---KQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAG 237
G + EA + L D + W ++LGAC H + ELG+ V++ L E + ++
Sbjct: 488 GHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMS- 546
Query: 238 YHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGE 297
VLLSN+Y G W+ + VR ++ E+G+ K GCS +E+G V+ FV D HP+ E
Sbjct: 547 -FVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDSSHPRLEE 605
Query: 298 IYDILDKLTMDIKD 311
+ + L+ L ++++
Sbjct: 606 LSETLNCLQHEMRN 619
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 32/182 (17%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGS-IAFATQLHGFSIRH 59
MI+G+ G E + +E L + P+ T SS++ ACS+ S + + +H +++
Sbjct: 175 MISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKN 234
Query: 60 FMDQNVYAGTALVDTYSKSGA----------------ISY---------------AENVF 88
V A +++ Y+K G+ +S+ A VF
Sbjct: 235 GWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVF 294
Query: 89 NRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVD 148
+ PEKN VT+TTM+ YG++G G +AL + M++SG+ D A+ A+L ACS L+
Sbjct: 295 HLAPEKNIVTWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLG 354
Query: 149 EG 150
G
Sbjct: 355 HG 356
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 90/176 (51%), Gaps = 7/176 (3%)
Query: 69 TALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIK 128
T+ + + +KSG I+ A VF+ MPE ++V + TM+ SY + G+ + A+ L+ + S K
Sbjct: 8 TSKIASLAKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAK 67
Query: 129 PDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYE 188
PD +F AILS C+ G V G +I +S+V S + DM G+ + A +
Sbjct: 68 PDDYSFTAILSTCASLGNVKFGRKI-QSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANK 126
Query: 189 FVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVA-GYHVLLS 243
+ + D W S+L A N FE A + +E KRVA +++++S
Sbjct: 127 VFRDMCCDSRNEVTWCSLLFAYMNAEQFE-----AALDVFVEMPKRVAFAWNIMIS 177
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 125/313 (39%), Gaps = 60/313 (19%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M+ Y++ GL+++AI + P+ + ++IL C+S G++ F ++ IR
Sbjct: 41 MLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLVIRSG 100
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRM--PEKNSVTYTTMMMSY------------ 106
++ +L+D Y K A VF M +N VT+ +++ +Y
Sbjct: 101 FCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEAALDV 160
Query: 107 -----------------GQHGMGR--RALTLYDSMLRSGIKPDAVAFVAILSACSYAGLV 147
G G+ L+L+ ML S KPD F ++++ACS
Sbjct: 161 FVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMNACS----A 216
Query: 148 DEGLEIFESMVKIHKIK----PSTEHYCCVADMLGRVG------RVVEAYEFVKQLGEDG 197
D ++ MV +K + E V ++G R +E+ E + Q+
Sbjct: 217 DSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIEVLTQVS--- 273
Query: 198 NVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDR 257
W SI+ AC G E A ++ + EK + + +++ Y G+ E R
Sbjct: 274 -----WNSIIDACMKIGETE----KALEVFHLAPEKNIVTWTTMITG-YGRNGDGEQALR 323
Query: 258 VRNQITEKGLHKE 270
++ + G+ +
Sbjct: 324 FFVEMMKSGVDSD 336
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/310 (36%), Positives = 188/310 (60%), Gaps = 3/310 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+ NG +A+ R + + ++V L IL A +S ++ ++H + +R
Sbjct: 558 MISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKG 617
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
A+VD Y+ G + A+ VF+R+ K + YT+M+ +YG HG G+ A+ L+D
Sbjct: 618 FCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFD 677
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M + PD ++F+A+L ACS+AGL+DEG + M ++++P EHY C+ DMLGR
Sbjct: 678 KMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRA 737
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
VVEA+EFVK + + E+W ++L AC++H E+G++ A++LL E E + G V
Sbjct: 738 NCVVEAFEFVKMMKTEPTA-EVWCALLAACRSHSEKEIGEIAAQRLL--ELEPKNPGNLV 794
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
L+SN++AE+G W +V++VR ++ G+ K GCS +E+ G V+ F +RD+ HP+S EIY+
Sbjct: 795 LVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYE 854
Query: 301 ILDKLTMDIK 310
L ++T ++
Sbjct: 855 KLSEVTRKLE 864
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 73/142 (51%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GY QN + ++A+ + + + V+++SI+ A ++ +LH + I+H
Sbjct: 357 LIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHG 416
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
D N+ G L+D YSK Y F RM +K+ +++TT++ Y Q+ AL L+
Sbjct: 417 WDSNLQVGNTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFR 476
Query: 121 SMLRSGIKPDAVAFVAILSACS 142
+ + ++ D + +IL A S
Sbjct: 477 DVAKKRMEIDEMILGSILRASS 498
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 102/224 (45%), Gaps = 14/224 (6%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI Y NG A+ + V + ++L AC+ I ++LH ++
Sbjct: 153 MIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLG 212
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK-NSVTYTTMMMSYGQHGMGRRALTLY 119
+ ALV Y+K+ +S A +F+ EK ++V + +++ SY G L L+
Sbjct: 213 YHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELF 272
Query: 120 DSMLRSGIKPDAVAFVAILSAC---SYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVA-- 174
M +G P++ V+ L+AC SYA L G EI S++K S+E Y C A
Sbjct: 273 REMHMTGPAPNSYTIVSALTACDGFSYAKL---GKEIHASVLK--SSTHSSELYVCNALI 327
Query: 175 DMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSIL-GACKNHGYFE 217
M R G++ +A ++Q+ V W S++ G +N Y E
Sbjct: 328 AMYTRCGKMPQAERILRQMNNADVV--TWNSLIKGYVQNLMYKE 369
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 80/153 (52%), Gaps = 1/153 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IAGY QN + +A+ R+ ++ + + L SIL A S S+ ++H +R
Sbjct: 458 VIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHCHILRKG 517
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ V LVD Y K + YA VF + K+ V++T+M+ S +G A+ L+
Sbjct: 518 LLDTVIQNE-LVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESEAVELFR 576
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEI 153
M+ +G+ D+VA + ILSA + +++G EI
Sbjct: 577 RMVETGLSADSVALLCILSAAASLSALNKGREI 609
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 79/160 (49%), Gaps = 1/160 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+++ Y+ +G + + + RE + PN+ T+ S L AC ++H ++
Sbjct: 255 ILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSS 314
Query: 61 MDQN-VYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ +Y AL+ Y++ G + AE + +M + VT+ +++ Y Q+ M + AL +
Sbjct: 315 THSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFF 374
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
M+ +G K D V+ +I++A + G+E+ ++K
Sbjct: 375 SDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIK 414
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 3/127 (2%)
Query: 36 ILPACSSTGSIAFATQLHGFSIRHF--MDQNVYAGTALVDTYSKSGAISYAENVFNRMPE 93
+L C +++ QLH + F + + AG LV Y K G++ AE VF+ MP+
Sbjct: 86 VLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGK-LVFMYGKCGSLDDAEKVFDEMPD 144
Query: 94 KNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEI 153
+ + + TM+ +Y +G AL LY +M G+ +F A+L AC+ + G E+
Sbjct: 145 RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSEL 204
Query: 154 FESMVKI 160
+VK+
Sbjct: 205 HSLLVKL 211
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 112/288 (38%), Positives = 177/288 (61%), Gaps = 5/288 (1%)
Query: 29 NAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVF 88
++ T+ S+L AC GS+ +++ + + +D N+ A +D + K G A +F
Sbjct: 209 DSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLF 268
Query: 89 NRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVD 148
M ++N V+++TM++ Y +G R ALTL+ +M G++P+ V F+ +LSACS+AGLV+
Sbjct: 269 EEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVN 328
Query: 149 EGLEIFESMVKIH--KIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSI 206
EG F MV+ + ++P EHY C+ D+LGR G + EAYEF+K++ + + IWG++
Sbjct: 329 EGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDT-GIWGAL 387
Query: 207 LGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKG 266
LGAC H LG+ VA+ L+ ET + YHVLLSNIYA G+W+ VD+VR+++ + G
Sbjct: 388 LGACAVHRDMILGQKVADVLV--ETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLG 445
Query: 267 LHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYDILDKLTMDIKDAGY 314
K S VE G +++F D+ HPQS IY+ LD++ I+ GY
Sbjct: 446 TKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGY 493
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+ GY +N L +++L ++ V P+ T ++ A S G + LH +++
Sbjct: 80 LFKGYVRNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYG 139
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
T LV Y K G +S AE +F M K+ V + + Q G AL ++
Sbjct: 140 FGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFN 199
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
M ++ D+ V++LSAC G ++ G EI++ K
Sbjct: 200 KMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARK 238
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 215 bits (547), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 117/328 (35%), Positives = 182/328 (55%), Gaps = 4/328 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI Y + G +A+ + V P+ +L SIL C++ S+ + Q+H +R
Sbjct: 302 MIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQ 361
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
D +VY + L+ Y K G + A+ VF+R K+ + + +++ Y HG+G AL ++
Sbjct: 362 FDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFH 421
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M SG P+ V +AIL+ACSYAG ++EGLEIFESM + P+ EHY C DMLGR
Sbjct: 422 EMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRA 481
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G+V +A E ++ + + +WG++LGACK H +L +V A+KL E E AG +V
Sbjct: 482 GQVDKAMELIESMTIKPDAT-VWGALLGACKTHSRLDLAEVAAKKLF--ENEPDNAGTYV 538
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEK-HPQSGEIY 299
LLS+I A +W +V VR + + K GCS +E+G V+ F K HP+ I
Sbjct: 539 LLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMIL 598
Query: 300 DILDKLTMDIKDAGYKTRYNSSLNEIVE 327
+L+K +++AGY + L+++ E
Sbjct: 599 MMLEKTDGLLREAGYSPDCSHVLHDVDE 626
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 100/219 (45%), Gaps = 15/219 (6%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNA--VTLSSILPACSSTGSIAFATQLHGFSIR 58
MI GY QN + A L +V+P V+ +S+L + +G I A + F +
Sbjct: 209 MITGYRQNNRVDVA------RKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEF--FEVM 260
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+ V A A++ + + G IS A VF+ M ++++ T+ M+ +Y + G AL L
Sbjct: 261 PM--KPVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDL 318
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+ M + G++P + ++ILS C+ + G ++ +V+ + + M
Sbjct: 319 FAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRC-QFDDDVYVASVLMTMYV 377
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFE 217
+ G +V+A + +M W SI+ +HG E
Sbjct: 378 KCGELVKAKLVFDRFSSKDIIM--WNSIISGYASHGLGE 414
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 14/158 (8%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+++GY NGL ++A R+ N V+ + ++ +G I + ++
Sbjct: 54 IVSGYFSNGLPKEA----RQLFDEMSERNVVSWNGLV-----SGYIKNRMIVEARNVFEL 104
Query: 61 M-DQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
M ++NV + TA+V Y + G + AE++F RMPE+N V++T M G +A LY
Sbjct: 105 MPERNVVSWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLY 164
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESM 157
D M +K D VA ++ G VDE IF+ M
Sbjct: 165 DMM---PVK-DVVASTNMIGGLCREGRVDEARLIFDEM 198
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 98/221 (44%), Gaps = 26/221 (11%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIP-NAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
M+ GY Q G+ +A E+L ++ N V+ + + G I A +L+
Sbjct: 116 MVKGYMQEGMVGEA-----ESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDM---- 166
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
++V A T ++ + G + A +F+ M E+N VT+TTM+ Y Q+ A L+
Sbjct: 167 MPVKDVVASTNMIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLF 226
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADML-- 177
+ M + V++ ++L + +G +++ E FE M P C A ++
Sbjct: 227 EVM----PEKTEVSWTSMLLGYTLSGRIEDAEEFFEVM-------PMKPVIACNAMIVGF 275
Query: 178 GRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFEL 218
G VG + +A + + N W ++ A + G FEL
Sbjct: 276 GEVGEISKARRVFDLMEDRDNA--TWRGMIKAYERKG-FEL 313
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 121/331 (36%), Positives = 189/331 (57%), Gaps = 8/331 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH- 59
+I+GY Q +E+A LRE L+ PN++TL+SILP C+ ++ + H + +R
Sbjct: 352 IISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCYILRRK 411
Query: 60 -FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
F D + +LVD Y+KSG I A+ V + M +++ VTYT+++ YG G G AL L
Sbjct: 412 CFKDYTML-WNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYGNQGEGGVALAL 470
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+ M RSGIKPD V VA+LSACS++ LV EG +F M + I+P +H+ C+ D+ G
Sbjct: 471 FKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCLQHFSCMVDLYG 530
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
R G + +A + + + + W ++L AC HG ++GK AEKLL M+ E GY
Sbjct: 531 RAGFLAKAKDIIHNMPYKPS-GATWATLLNACHIHGNTQIGKWAAEKLLEMKPEN--PGY 587
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEI 298
+VL++N+YA G W + VR + + G+ K+ GC+ ++ + F D P++
Sbjct: 588 YVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWIDTDSGFSLFSVGDTSSPEACNT 647
Query: 299 YDILDKLTMDIKD-AGYK-TRYNSSLNEIVE 327
Y +LD L +KD AGY + SS E+++
Sbjct: 648 YPLLDGLNQLMKDNAGYAINKVQSSDEELLQ 678
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IA Y +N L E+ I + + + P+A T S+L AC T +AF +HG
Sbjct: 115 LIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDVAFGRVVHGSIEVSS 174
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++Y AL+ Y + + A +F+RM E+++V++ ++ Y GM A L+D
Sbjct: 175 YKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCYASEGMWSEAFELFD 234
Query: 121 SMLRSGIKPDAVAFVAILSACSYAG 145
M SG++ + + I C G
Sbjct: 235 KMWFSGVEVSVITWNIISGGCLQTG 259
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%)
Query: 37 LPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNS 96
L ACS G+I ++HG +I D L+ YSK + +A VF + E +
Sbjct: 287 LKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQTEENSL 346
Query: 97 VTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFES 156
T+ +++ Y Q A L ML +G +P+++ +IL C+ + G E
Sbjct: 347 CTWNSIISGYAQLNKSEEASHLLREMLVAGFQPNSITLASILPLCARIANLQHGKEFHCY 406
Query: 157 MVKIHKIKPSTEHYCCVADMLGRVGRVVEAYE 188
+++ K T + + D+ + G++V A +
Sbjct: 407 ILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQ 438
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 213 bits (543), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 199/331 (60%), Gaps = 4/331 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI GY Q+G +AI R + PN+ TL+++L SS S++ Q+HG +++
Sbjct: 384 MIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSG 443
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMP-EKNSVTYTTMMMSYGQHGMGRRALTLY 119
+V AL+ Y+K+G I+ A F+ + E+++V++T+M+++ QHG AL L+
Sbjct: 444 EIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELF 503
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
++ML G++PD + +V + SAC++AGLV++G + F+ M + KI P+ HY C+ D+ GR
Sbjct: 504 ETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGR 563
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G + EA EF++++ + +V+ WGS+L AC+ H +LGKV AE+LL +E E +G +
Sbjct: 564 AGLLQEAQEFIEKMPIEPDVV-TWGSLLSACRVHKNIDLGKVAAERLLLLEPEN--SGAY 620
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
L+N+Y+ G+WE ++R + + + KE G S +E+ V+ F D HP+ EIY
Sbjct: 621 SALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIY 680
Query: 300 DILDKLTMDIKDAGYKTRYNSSLNEIVETVE 330
+ K+ +IK GY S L+++ E V+
Sbjct: 681 MTMKKIWDEIKKMGYVPDTASVLHDLEEEVK 711
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 42/264 (15%)
Query: 1 MIAGYTQNGLNEKAI----LTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLH--- 53
MI+G+ Q G + +A+ LR++LL P+ TL+S+L AC++ + Q+H
Sbjct: 249 MISGFNQRGYDLRALDIFSKMLRDSLLS---PDRFTLASVLSACANLEKLCIGKQIHSHI 305
Query: 54 ---GFSI---------------------------RHFMDQNVYAGTALVDTYSKSGAISY 83
GF I R D + TAL+D Y K G ++
Sbjct: 306 VTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQ 365
Query: 84 AENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSY 143
A+N+F + +++ V +T M++ Y QHG A+ L+ SM+ G +P++ A+LS S
Sbjct: 366 AKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASS 425
Query: 144 AGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIW 203
+ G +I S VK +I + + M + G + A + + + + W
Sbjct: 426 LASLSHGKQIHGSAVKSGEIYSVSVSNALIT-MYAKAGNITSASRAFDLIRCERDTVS-W 483
Query: 204 GSILGACKNHGYFELGKVVAEKLL 227
S++ A HG+ E + E +L
Sbjct: 484 TSMIIALAQHGHAEEALELFETML 507
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 113/266 (42%), Gaps = 38/266 (14%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI GY G KAI + + + + P TL+++L + ++T + ++H F ++
Sbjct: 117 MIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLG 176
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNR------------------------------ 90
+ NV +L++ Y+K G A+ VF+R
Sbjct: 177 LRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFE 236
Query: 91 -MPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLR-SGIKPDAVAFVAILSACSYAGLVD 148
M E++ VT+ +M+ + Q G RAL ++ MLR S + PD ++LSAC+ +
Sbjct: 237 QMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLC 296
Query: 149 EGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILG 208
G +I +V S + M R G V A ++Q G +E + ++L
Sbjct: 297 IGKQIHSHIVTT-GFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLD 355
Query: 209 ACKNHGYFELGKVVAEKLLSMETEKR 234
GY +LG + K + + + R
Sbjct: 356 -----GYIKLGDMNQAKNIFVSLKDR 376
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/98 (22%), Positives = 54/98 (55%)
Query: 63 QNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSM 122
+ ++ ++ YSK G + F+++P+++SV++TTM++ Y G +A+ + M
Sbjct: 78 RTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDM 137
Query: 123 LRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKI 160
++ GI+P +L++ + ++ G ++ +VK+
Sbjct: 138 VKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKL 175
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 213 bits (542), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/310 (36%), Positives = 183/310 (59%), Gaps = 3/310 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+GY ++G +AI + L+ V P+ VTL ++L AC+ GS+ ++ +
Sbjct: 221 VISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRG 280
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
M++ V A++D Y+KSG I+ A +VF + E+N VT+TT++ HG G AL +++
Sbjct: 281 MNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFN 340
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+++G++P+ V F+AILSACS+ G VD G +F SM + I P+ EHY C+ D+LGR
Sbjct: 341 RMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRA 400
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G++ EA E +K + N IWGS+L A H ELG+ +L+ +E +G ++
Sbjct: 401 GKLREADEVIKSMPFKANA-AIWGSLLAASNVHHDLELGERALSELIKLEPNN--SGNYM 457
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LL+N+Y+ G W+ +RN + G+ K G S +E+ V F+S D HPQ I++
Sbjct: 458 LLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENRVYKFISGDLTHPQVERIHE 517
Query: 301 ILDKLTMDIK 310
IL ++ + I+
Sbjct: 518 ILQEMDLQIQ 527
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 86/221 (38%), Gaps = 36/221 (16%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
P+ T +L + F Q+HG + D +V+ T L+ Y G + A +
Sbjct: 114 PDTFTFPFVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKM 173
Query: 88 FNRMPEK---------------------------------NSVTYTTMMMSYGQHGMGRR 114
F+ M K N V++T ++ Y + G
Sbjct: 174 FDEMLVKDVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASE 233
Query: 115 ALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVA 174
A+ ++ ML ++PD V +A+LSAC+ G ++ G I S V + + V
Sbjct: 234 AIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERIC-SYVDHRGMNRAVSLNNAVI 292
Query: 175 DMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGY 215
DM + G + +A + + + E V W +I+ HG+
Sbjct: 293 DMYAKSGNITKALDVFECVNERNVV--TWTTIIAGLATHGH 331
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 111/325 (34%), Positives = 179/325 (55%), Gaps = 3/325 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M+AGY QN E+A+L R A + N TLSS++ ACS+ ++ Q+H +
Sbjct: 234 MVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSG 293
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
NV+ ++ VD Y+K G++ + +F+ + EKN + T++ + +H + + L++
Sbjct: 294 FGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFE 353
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M + G+ P+ V F ++LS C + GLV+EG F+ M + + P+ HY C+ D+LGR
Sbjct: 354 KMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRA 413
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + EAYE +K + D IWGS+L +C+ + EL +V AEKL +E E AG HV
Sbjct: 414 GLLSEAYELIKSIPFDPTA-SIWGSLLASCRVYKNLELAEVAAEKLFELEPEN--AGNHV 470
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LLSNIYA +WE + + R + + + K G S ++I V+ F + HP+ EI
Sbjct: 471 LLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICS 530
Query: 301 ILDKLTMDIKDAGYKTRYNSSLNEI 325
LD L + + GYK L+++
Sbjct: 531 TLDNLVIKFRKFGYKPSVEHELHDV 555
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 107/226 (47%), Gaps = 3/226 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI YT+N + +A+ E + T+SS+L AC +LH S++
Sbjct: 133 MIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKTC 192
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+D N+Y GTAL+D Y+K G I A VF M +K+SVT+++M+ Y Q+ AL LY
Sbjct: 193 IDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEALLLYR 252
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
R ++ + +++ ACS + EG ++ + K + DM +
Sbjct: 253 RAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICK-SGFGSNVFVASSAVDMYAKC 311
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKL 226
G + E+Y ++ E +E+W +I+ H + ++ EK+
Sbjct: 312 GSLRESYIIFSEVQEKN--LELWNTIISGFAKHARPKEVMILFEKM 355
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 24/193 (12%)
Query: 36 ILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKN 95
IL C+ G++ A HG IR ++ +V L++ YSK G + A VF+ M E++
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERS 126
Query: 96 SVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFE 155
V++ TM+ Y ++ M AL ++ M G K ++LSAC G+ + LE
Sbjct: 127 LVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSAC---GVNCDALEC-- 181
Query: 156 SMVKIHKIKPSTEHYCCV----------ADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGS 205
K+H + T C+ D+ + G + +A + + + + +V W S
Sbjct: 182 --KKLHCLSVKT----CIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSV--TWSS 233
Query: 206 IL-GACKNHGYFE 217
++ G +N Y E
Sbjct: 234 MVAGYVQNKNYEE 246
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 212 bits (539), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 116/329 (35%), Positives = 187/329 (56%), Gaps = 5/329 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI G NG ++ L RE + PN V+L+ +L ACS +GS F LHGF +
Sbjct: 240 MIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAG 299
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNS-VTYTTMMMSYGQHGMGRRALTLY 119
V AL+D YS+ G + A VF M EK V++T+M+ HG G A+ L+
Sbjct: 300 YSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLF 359
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
+ M G+ PD ++F+++L ACS+AGL++EG + F M +++ I+P EHY C+ D+ GR
Sbjct: 360 NEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGR 419
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G++ +AY+F+ Q+ + +W ++LGAC +HG EL + V ++L E + +G
Sbjct: 420 SGKLQKAYDFICQMPIPPTAI-VWRTLLGACSSHGNIELAEQVKQRL--NELDPNNSGDL 476
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
VLLSN YA G+W++V +R + + + K SLVE+G + F + ++K E +
Sbjct: 477 VLLSNAYATAGKWKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAH 536
Query: 300 DILDKLTMDIKD-AGYKTRYNSSLNEIVE 327
+ L ++ + +KD AGY S+L ++ E
Sbjct: 537 EKLKEIILRLKDEAGYTPEVASALYDVEE 565
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 87/187 (46%), Gaps = 6/187 (3%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
PN V ++++ AC +A A ++ + +N + ++ Y K+G + A+ +
Sbjct: 170 PNLVAWNAVITACFRGNDVAGAREI----FDKMLVRNHTSWNVMLAGYIKAGELESAKRI 225
Query: 88 FNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLV 147
F+ MP ++ V+++TM++ +G + + + R+G+ P+ V+ +LSACS +G
Sbjct: 226 FSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSF 285
Query: 148 DEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSIL 207
+ G +I V+ + DM R G V A + + E ++ W S++
Sbjct: 286 EFG-KILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQEKRCIVS-WTSMI 343
Query: 208 GACKNHG 214
HG
Sbjct: 344 AGLAMHG 350
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 104/226 (46%), Gaps = 14/226 (6%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK-VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
++ GY+++ ++ E + V P++ + + ++ A + S+ Q+H +++H
Sbjct: 76 LVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHCQALKH 135
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
++ +++ GT L+ Y G + +A VF+ M + N V + ++ + + A ++
Sbjct: 136 GLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDVAGAREIF 195
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
D ML + ++ +L+ AG ++ IF M + ST + +
Sbjct: 196 DKMLVR----NHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWST-----MIVGIAH 246
Query: 180 VGRVVEAYEFVKQLGEDG---NVMEIWGSILGACKNHGYFELGKVV 222
G E++ + ++L G N + + G +L AC G FE GK++
Sbjct: 247 NGSFNESFLYFRELQRAGMSPNEVSLTG-VLSACSQSGSFEFGKIL 291
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 107/234 (45%), Gaps = 14/234 (5%)
Query: 35 SILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALV--DTYSKSGAISYAENVFNRMP 92
S+L +C + ++ TQ+HG I++ +D + Y L+ S S A+ YA + P
Sbjct: 10 SLLNSCKNLRAL---TQIHGLFIKYGVDTDSYFTGKLILHCAISISDALPYARRLLLCFP 66
Query: 93 EKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSG-IKPDAVAFVAILSACSYAGLVDEGL 151
E ++ + T++ Y + ++ ++ M+R G + PD+ +F ++ A + G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 152 EIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACK 211
++ +K H ++ + M G G V A + ++ + V W +++ AC
Sbjct: 127 QMHCQALK-HGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVA--WNAVITACF 183
Query: 212 NHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEK 265
+ + +K+L + ++V+L+ Y + GE E+ R+ +++ +
Sbjct: 184 RGNDVAGAREIFDKMLV----RNHTSWNVMLAG-YIKAGELESAKRIFSEMPHR 232
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 211 bits (537), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 117/322 (36%), Positives = 179/322 (55%), Gaps = 3/322 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GY G KA REAL ++V VT SS L AC+S S+ Q+HG +I+
Sbjct: 420 VIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTN 479
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ V +L+D Y+K G I +A++VFN M + ++ ++ Y HG+GR+AL + D
Sbjct: 480 NAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRILD 539
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M KP+ + F+ +LS CS AGL+D+G E FESM++ H I+P EHY C+ +LGR
Sbjct: 540 IMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRS 599
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G++ +A + ++ + + +VM IW ++L A N E + AE++L + + +V
Sbjct: 600 GQLDKAMKLIEGIPYEPSVM-IWRAMLSASMNQNNEEFARRSAEEILKINPKDEAT--YV 656
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
L+SN+YA +W NV +R + E G+ KE G S +E G V+YF HP I
Sbjct: 657 LVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLING 716
Query: 301 ILDKLTMDIKDAGYKTRYNSSL 322
+L+ L M AGY N+ L
Sbjct: 717 MLEWLNMKATRAGYVPDRNAVL 738
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 107/219 (48%), Gaps = 13/219 (5%)
Query: 1 MIAGYTQNGLNEKAI---LTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSI 57
MIA + QNG +A+ + +REA V+PN TLSSIL C+ QLHG +
Sbjct: 319 MIARFCQNGFCNEAVDLFIRMREAF---VVPNEFTLSSILNGCAIGKCSGLGEQLHGLVV 375
Query: 58 RHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
+ D ++Y AL+D Y+K + A +F + KN V++ T+++ Y G G +A +
Sbjct: 376 KVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWNTVIVGYENLGEGGKAFS 435
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADML 177
++ LR+ + V F + L AC+ +D G+++ +K + K + DM
Sbjct: 436 MFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLI-DMY 494
Query: 178 GRVGRVVEAYEFVKQLGEDGNVMEI--WGSILGACKNHG 214
+ G + +F + + + +++ W +++ HG
Sbjct: 495 AKCGDI----KFAQSVFNEMETIDVASWNALISGYSTHG 529
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+++ Y +NG E ++ L + +PN T + L A G+ FA +HG ++
Sbjct: 218 IVSCYVENGYFEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTC 277
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ G L+ Y++ G +S A VFN MP+ + V ++ M+ + Q+G A+ L+
Sbjct: 278 YVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFI 337
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKI 160
M + + P+ +IL+ C+ G ++ +VK+
Sbjct: 338 RMREAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKV 377
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 211 bits (537), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 185/319 (57%), Gaps = 6/319 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IAGY + G +A+ R+ + V P T SS L A +S S+ ++HG+ IR
Sbjct: 282 LIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTN 341
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK-NSVTYTTMMMSYGQHGMGRRALTLY 119
+ N ++L+D YSKSG++ +E VF +K + V + TM+ + QHG+G +AL +
Sbjct: 342 VRPNAIVISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRML 401
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
D M++ ++P+ V IL+ACS++GLV+EGL FESM H I P EHY C+ D+LGR
Sbjct: 402 DDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGR 461
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G E ++++ + + IW +ILG C+ HG ELGK A++L+ ++ E + +
Sbjct: 462 AGCFKELMRKIEEMPFEPD-KHIWNAILGVCRIHGNEELGKKAADELIKLDPES--SAPY 518
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRD--EKHPQSGE 297
+LLS+IYA+ G+WE V+++R + ++ ++KE S +EI V F D H + E
Sbjct: 519 ILLSSIYADHGKWELVEKLRGVMKKRRVNKEKAVSWIEIEKKVEAFTVSDGSHAHARKEE 578
Query: 298 IYDILDKLTMDIKDAGYKT 316
IY IL L I++ +T
Sbjct: 579 IYFILHNLAAVIEEEASRT 597
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 33/245 (13%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGF----- 55
M+ GY Q+G +A+ +E + N + + +L AC + + Q HG
Sbjct: 150 MVIGYAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAG 209
Query: 56 ----------------------SIRHFMDQ----NVYAGTALVDTYSKSGAISYAENVFN 89
S + D+ +++ T L+ Y+K G + AE +F
Sbjct: 210 FLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFC 269
Query: 90 RMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDE 149
MPEKN V++T ++ Y + G G RAL L+ M+ G+KP+ F + L A + +
Sbjct: 270 EMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRH 329
Query: 150 GLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGA 209
G EI M++ + ++P+ + DM + G +EA E V ++ +D + W +++ A
Sbjct: 330 GKEIHGYMIRTN-VRPNAIVISSLIDMYSKSGS-LEASERVFRICDDKHDCVFWNTMISA 387
Query: 210 CKNHG 214
HG
Sbjct: 388 LAQHG 392
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 14/191 (7%)
Query: 63 QNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSM 122
+N+Y+ +V Y KSG + A VF+ MPE++ V++ TM++ Y Q G AL Y
Sbjct: 111 RNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEF 170
Query: 123 LRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGR 182
RSGIK + +F +L+AC + + + V + + C + D + G+
Sbjct: 171 RRSGIKFNEFSFAGLLTACVKSRQLQLNRQA-HGQVLVAGFLSNVVLSCSIIDAYAKCGQ 229
Query: 183 VVEAYEFVKQLGEDGNV--MEIWGSILGACKNHGYFELGKV-VAEKLLSMETEKRVAGYH 239
+ E K+ ++ V + IW +++ GY +LG + AEKL EK +
Sbjct: 230 M----ESAKRCFDEMTVKDIHIWTTLIS-----GYAKLGDMEAAEKLFCEMPEKNPVSWT 280
Query: 240 VLLSNIYAEEG 250
L++ Y +G
Sbjct: 281 ALIAG-YVRQG 290
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 211 bits (537), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 106/279 (37%), Positives = 171/279 (61%), Gaps = 3/279 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+G+ + +A R+ L ++PN TL++IL +CSS GS+ +HG+ IR+
Sbjct: 283 LISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNG 342
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ + T+ +D Y++ G I A VF+ MPE+N +++++M+ ++G +G+ AL +
Sbjct: 343 IEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVISWSSMINAFGINGLFEEALDCFH 402
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M + P++V FV++LSACS++G V EG + FESM + + + P EHY C+ D+LGR
Sbjct: 403 KMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEEHYACMVDLLGRA 462
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + EA F+ + + WG++L AC+ H +L +AEKLLSME EK + +V
Sbjct: 463 GEIGEAKSFIDNMPVKP-MASAWGALLSACRIHKEVDLAGEIAEKLLSMEPEK--SSVYV 519
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIG 279
LLSNIYA+ G WE V+ VR ++ KG K +G S E+G
Sbjct: 520 LLSNIYADAGMWEMVNCVRRKMGIKGYRKHVGQSATEVG 558
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 91/190 (47%), Gaps = 4/190 (2%)
Query: 29 NAVTLSSILPACSSTGSIAFATQLHGFSIRH-FMDQNVYAGTALVDTYSKSGAISYAENV 87
+A+TL ++ AC + + +HG SIR F+DQ+ Y +++D Y K + A +
Sbjct: 209 DALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKL 268
Query: 88 FNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLV 147
F ++N V +TT++ + + A L+ MLR I P+ AIL +CS G +
Sbjct: 269 FETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSL 328
Query: 148 DEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSIL 207
G + M++ + I+ ++ DM R G + A + E NV+ W S++
Sbjct: 329 RHGKSVHGYMIR-NGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPER-NVIS-WSSMI 385
Query: 208 GACKNHGYFE 217
A +G FE
Sbjct: 386 NAFGINGLFE 395
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 116/277 (41%), Gaps = 44/277 (15%)
Query: 29 NAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVF 88
++ L + AC G + +HG ++++ +D++ Y +LV+ Y++ G + A+ VF
Sbjct: 108 DSFNLVFAIKACVGLGLLENGILIHGLAMKNGLDKDDYVAPSLVEMYAQLGTMESAQKVF 167
Query: 89 NRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACS--YAG- 145
+ +P +NSV + +M Y ++ L+ M +G+ DA+ + ++ AC +AG
Sbjct: 168 DEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCLMRDTGLALDALTLICLVKACGNVFAGK 227
Query: 146 ---------------------------------LVDEGLEIFESMVKIHKIKPSTEHYCC 172
L+D ++FE+ V + + +T
Sbjct: 228 VGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCRLLDNARKLFETSVDRNVVMWTT----- 282
Query: 173 VADMLGRVGRVVEAYEFVKQLGEDGNVME--IWGSILGACKNHGYFELGKVVAEKLLSME 230
+ + R VEA++ +Q+ + + +IL +C + G GK V ++
Sbjct: 283 LISGFAKCERAVEAFDLFRQMLRESILPNQCTLAAILVSCSSLGSLRHGKSVHGYMIRNG 342
Query: 231 TEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGL 267
E + + ++YA G + V + + E+ +
Sbjct: 343 IEMDAVNFTSFI-DMYARCGNIQMARTVFDMMPERNV 378
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 4/123 (3%)
Query: 35 SILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMP-- 92
++L S ++ Q+H I H + V G++L + Y +S + +A + FNR+P
Sbjct: 9 ALLTILSQAKTLNHTQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCW 68
Query: 93 EKNSVTYTTMMMSYGQHGMG--RRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEG 150
++N ++ T++ Y + L LY+ M R D+ V + AC GL++ G
Sbjct: 69 KRNRHSWNTILSGYSKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFAIKACVGLGLLENG 128
Query: 151 LEI 153
+ I
Sbjct: 129 ILI 131
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 210 bits (535), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 112/306 (36%), Positives = 174/306 (56%), Gaps = 2/306 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+ Y G KA+ + + V P+ VT +S+LPACS ++ Q+H
Sbjct: 381 MISSYISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESR 440
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ + +AL+D YSK G A +FN +P+K+ V++T M+ +YG HG R AL +D
Sbjct: 441 LETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYGSHGQPREALYQFD 500
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M + G+KPD V +A+LSAC +AGL+DEGL+ F M + I+P EHY C+ D+LGR
Sbjct: 501 EMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPIIEHYSCMIDILGRA 560
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
GR++EAYE ++Q E + E+ ++ AC H LG +A L+ E A ++
Sbjct: 561 GRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLV--ENYPDDASTYM 618
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
+L N+YA W+ RVR ++ E GL K+ GCS +E+ V +F + D H ++ +Y+
Sbjct: 619 VLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIEMSDKVCHFFAEDRSHLRAENVYE 678
Query: 301 ILDKLT 306
L L+
Sbjct: 679 CLALLS 684
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 111/218 (50%), Gaps = 11/218 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI GY G ++ + L ++ P+ TL+SIL ACS + ++ +HG+ IR
Sbjct: 280 MIKGYVAKGDSKSCVEILNRMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIRSV 339
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ ++Y +L+D Y K G + AE VF++ + + ++ M+ SY G +A+ +YD
Sbjct: 340 VNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYD 399
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEG----LEIFESMVKIHKIKPSTEHYCCVADM 176
M+ G+KPD V F ++L ACS +++G L I ES ++ ++ S + DM
Sbjct: 400 QMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESRLETDELLLSA-----LLDM 454
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
+ G EA+ + + V W ++ A +HG
Sbjct: 455 YSKCGNEKEAFRIFNSIPKKDVVS--WTVMISAYGSHG 490
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 126/302 (41%), Gaps = 43/302 (14%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+ + Q+G EKA+ PN+V+L+ + ACS + ++H ++
Sbjct: 179 VISCFYQSGEAEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKG 238
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + Y +ALVD Y K + A VF +MP K+ V + +M+ Y G + + + +
Sbjct: 239 FELDEYVNSALVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILN 298
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+ G +P +IL ACS + + G I +++ + C + D+ +
Sbjct: 299 RMIIEGTRPSQTTLTSILMACSRSRNLLHGKFIHGYVIR-SVVNADIYVNCSLIDLYFKC 357
Query: 181 G----------------------------------RVVEAYEFVKQLGEDGNVMEIWGSI 206
G + VE Y+ + +G +V+ + S+
Sbjct: 358 GEANLAETVFSKTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVSVGVKPDVV-TFTSV 416
Query: 207 LGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLS---NIYAEEGEWENVDRVRNQIT 263
L AC E GK + + +E R+ +LLS ++Y++ G + R+ N I
Sbjct: 417 LPACSQLAALEKGKQIHLSI----SESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIP 472
Query: 264 EK 265
+K
Sbjct: 473 KK 474
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 80/160 (50%), Gaps = 1/160 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKV-IPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+++GY++N + + + L + +P++ T +++ A + G +H ++
Sbjct: 77 LMSGYSKNSMFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKS 136
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+V ++LV Y+K + VF+ MPE++ ++ T++ + Q G +AL L+
Sbjct: 137 GYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELF 196
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
M SG +P++V+ +SACS ++ G EI VK
Sbjct: 197 GRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVK 236
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/309 (35%), Positives = 173/309 (55%), Gaps = 7/309 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVI-PNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
++A TQNGL +A+ R + I PN VT+ +L AC+ TG++ A +H F+ R
Sbjct: 230 ILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRR 289
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ +V+ +LVD Y K G + A +VF +K+ + +M+ + HG A+ ++
Sbjct: 290 DLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVF 349
Query: 120 DSMLR---SGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
+ M++ + IKPD + F+ +L+AC++ GLV +G F+ M I+P EHY C+ D+
Sbjct: 350 EEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYFDLMTNRFGIEPRIEHYGCLIDL 409
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVA 236
LGR GR EA E + + + IWGS+L ACK HG+ +L +V + L+++
Sbjct: 410 LGRAGRFDEALEVMSTMKMKAD-EAIWGSLLNACKIHGHLDLAEVAVKNLVALNPNN--G 466
Query: 237 GYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSG 296
GY +++N+Y E G WE R R I + +K G S +EI V+ F S D+ HP++
Sbjct: 467 GYVAMMANLYGEMGNWEEARRARKMIKHQNAYKPPGWSRIEIDNEVHQFYSLDKSHPETE 526
Query: 297 EIYDILDKL 305
EIY ILD L
Sbjct: 527 EIYMILDSL 535
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 95/194 (48%), Gaps = 16/194 (8%)
Query: 41 SSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYT 100
SS I A QL ++NV + TA++ Y++SG IS A +F MPE++ ++
Sbjct: 173 SSVSHITLARQL----FDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWN 228
Query: 101 TMMMSYGQHGMGRRALTLYDSMLR-SGIKPDAVAFVAILSACSYAGLVD--EGLEIFESM 157
++ + Q+G+ A++L+ M+ I+P+ V V +LSAC+ G + +G+ F
Sbjct: 229 AILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFA-- 286
Query: 158 VKIHKIKPSTEHYC--CVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGY 215
++ S++ + + D+ G+ G + EA K + + W S++ HG
Sbjct: 287 ---YRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKS--LTAWNSMINCFALHGR 341
Query: 216 FELGKVVAEKLLSM 229
E V E+++ +
Sbjct: 342 SEEAIAVFEEMMKL 355
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 176/314 (56%), Gaps = 3/314 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+G +NG E+ + P S + +C+ G+ Q H ++
Sbjct: 388 MISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIG 447
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
D ++ AG AL+ Y+K G + A VF MP +SV++ ++ + GQHG G A+ +Y+
Sbjct: 448 FDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYE 507
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
ML+ GI+PD + + +L+ACS+AGLVD+G + F+SM +++I P +HY + D+L R
Sbjct: 508 EMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRS 567
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G+ +A ++ L EIW ++L C+ HG ELG + A+KL + E G ++
Sbjct: 568 GKFSDAESVIESLPFKPTA-EIWEALLSGCRVHGNMELGIIAADKLFGLIPEHD--GTYM 624
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LLSN++A G+WE V RVR + ++G+ KE+ CS +E+ V+ F+ D HP++ +Y
Sbjct: 625 LLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYI 684
Query: 301 ILDKLTMDIKDAGY 314
L L +++ GY
Sbjct: 685 YLQDLGKEMRRLGY 698
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 109/257 (42%), Gaps = 33/257 (12%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR-- 58
MI+GY G ++A+ +R + + + T S++ AC++ G + Q+H + +R
Sbjct: 257 MISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE 316
Query: 59 ----HFMD------------------------QNVYAGTALVDTYSKSGAISYAENVFNR 90
HF + +++ + AL+ Y SG I A+ +F
Sbjct: 317 DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKE 376
Query: 91 MPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEG 150
M EKN +++ M+ ++G G L L+ M R G +P AF + +C+ G G
Sbjct: 377 MKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNG 436
Query: 151 LEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGAC 210
+ ++KI S + M + G V EA + + + +V W +++ A
Sbjct: 437 QQYHAQLLKI-GFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVS--WNALIAAL 493
Query: 211 KNHGYFELGKVVAEKLL 227
HG+ V E++L
Sbjct: 494 GQHGHGAEAVDVYEEML 510
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 116/285 (40%), Gaps = 37/285 (12%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
P A L+ ++ + + +A QL + + A T +V Y SG I+ A V
Sbjct: 47 PRAHILNRLIDVYCKSSELNYARQL----FDEISEPDKIARTTMVSGYCASGDITLARGV 102
Query: 88 FNRMP--EKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAG 145
F + P +++V Y M+ + + G A+ L+ M G KPD F ++L+ +
Sbjct: 103 FEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVA 162
Query: 146 LVDEGLEIFES---------MVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGED 196
++ F + + + S C + L R V F + L +D
Sbjct: 163 DDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSARKV----FDEILEKD 218
Query: 197 GNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVD 256
W +++ +GYF+LG+ E L M+ ++ Y+ ++S Y G ++
Sbjct: 219 ERS---WTTMMTGYVKNGYFDLGE---ELLEGMDDNMKLVAYNAMISG-YVNRGFYQEAL 271
Query: 257 RVRNQITEKGLHKE--------MGCS---LVEIGGLVNYFVSRDE 290
+ ++ G+ + C+ L+++G V+ +V R E
Sbjct: 272 EMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE 316
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 99/225 (44%), Gaps = 18/225 (8%)
Query: 32 TLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRM 91
L S+ C+S+ S+ + + ++++ + T ++ Y K+G E + M
Sbjct: 189 ALVSVYSKCASSPSLLHSARK---VFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGM 245
Query: 92 PEKNS-VTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEG 150
+ V Y M+ Y G + AL + M+ SGI+ D + +++ AC+ AGL+ G
Sbjct: 246 DDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLG 305
Query: 151 LEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGAC 210
++ +++ ++ + + + G+ EA +++ V W ++L
Sbjct: 306 KQVHAYVLRREDFSFHFDN--SLVSLYYKCGKFDEARAIFEKMPAKDLVS--WNALLS-- 359
Query: 211 KNHGYFELGKVVAEKLLSME-TEKRVAGYHVLLS----NIYAEEG 250
GY G + KL+ E EK + + +++S N + EEG
Sbjct: 360 ---GYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEG 401
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 98/255 (38%), Positives = 161/255 (63%), Gaps = 3/255 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+G N NEKA ++ L H + PN+ T+ ++LPAC++ + ++HG+S+
Sbjct: 259 IISGLVHNFQNEKAFDAFKQMLTHGLYPNSATIITLLPACTTLAYMKHGKEIHGYSVVTG 318
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ + + +AL+D Y K G IS A +F + P+K +VT+ +M+ Y HG+ +A+ L+D
Sbjct: 319 LEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMIFCYANHGLADKAVELFD 378
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M +G K D + F AIL+ACS+AGL D G +F M ++I P EHY C+ D+LGR
Sbjct: 379 QMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVDLLGRA 438
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G++VEAYE +K + + ++ +WG++L AC+NHG EL ++ A+ L +E E +G +
Sbjct: 439 GKLVEAYEMIKAMRMEPDLF-VWGALLAACRNHGNMELARIAAKHLAELEPEN--SGNGL 495
Query: 241 LLSNIYAEEGEWENV 255
LL+++YA G WE+V
Sbjct: 496 LLTSLYANAGSWESV 510
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 101/223 (45%), Gaps = 5/223 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI +NG ++++ RE + +A + S+L A + F +H ++
Sbjct: 88 MIGACARNGYYQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFS 147
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + + ++L+D YSK G + A VF+ + E++ V + M+ Y + AL L
Sbjct: 148 YESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVK 207
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M GIKPD + + A++S S+ ++ EI E M + KP + + L
Sbjct: 208 DMKLLGIKPDVITWNALISGFSHMRNEEKVSEILELMC-LDGYKPDVVSWTSIISGLVHN 266
Query: 181 GRVVEAYEFVKQLGEDG---NVMEIWGSILGACKNHGYFELGK 220
+ +A++ KQ+ G N I ++L AC Y + GK
Sbjct: 267 FQNEKAFDAFKQMLTHGLYPNSATII-TLLPACTTLAYMKHGK 308
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 208 bits (529), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 112/325 (34%), Positives = 177/325 (54%), Gaps = 3/325 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+++G+ Q+G NE+A+ + N T S + A S T ++ Q+H +
Sbjct: 663 LVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTG 722
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
D AL+ Y+K G+IS AE F + KN V++ ++ +Y +HG G AL +D
Sbjct: 723 YDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFD 782
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+ S ++P+ V V +LSACS+ GLVD+G+ FESM + + P EHY CV DML R
Sbjct: 783 QMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRA 842
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + A EF++++ + + +W ++L AC H E+G+ A LL +E E + +V
Sbjct: 843 GLLSRAKEFIQEMPIKPDAL-VWRTLLSACVVHKNMEIGEFAAHHLLELEPED--SATYV 899
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LLSN+YA +W+ D R ++ EKG+ KE G S +E+ ++ F D+ HP + EI++
Sbjct: 900 LLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHE 959
Query: 301 ILDKLTMDIKDAGYKTRYNSSLNEI 325
LT + GY S LNE+
Sbjct: 960 YFQDLTKRASEIGYVQDCFSLLNEL 984
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 3/197 (1%)
Query: 18 LREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSK 77
R+ + +++PN T SIL C G + Q+H I+ N Y + L+D Y+K
Sbjct: 478 FRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAK 537
Query: 78 SGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAI 137
G + A ++ R K+ V++TTM+ Y Q+ +ALT + ML GI+ D V
Sbjct: 538 LGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNA 597
Query: 138 LSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDG 197
+SAC+ + EG +I + + + + R G++ E+Y +Q
Sbjct: 598 VSACAGLQALKEGQQI-HAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGD 656
Query: 198 NVMEIWGSILGACKNHG 214
N+ W +++ + G
Sbjct: 657 NIA--WNALVSGFQQSG 671
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+G ++N +AI + + ++P SS+L AC S+ QLHG ++
Sbjct: 259 MISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG 318
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ Y ALV Y G + AE++F+ M ++++VTY T++ Q G G +A+ L+
Sbjct: 319 FSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK 378
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKI 160
M G++PD+ +++ ACS G + G ++ K+
Sbjct: 379 RMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKL 418
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 98/199 (49%), Gaps = 6/199 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G +Q G EKA+ + L + P++ TL+S++ ACS+ G++ QLH ++ +
Sbjct: 360 LINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLG 419
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
N AL++ Y+K I A + F +N V + M+++YG R + ++
Sbjct: 420 FASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFR 479
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCC--VADMLG 178
M I P+ + +IL C G ++ G +I ++K + Y C + DM
Sbjct: 480 QMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF---QLNAYVCSVLIDMYA 536
Query: 179 RVGRVVEAYE-FVKQLGED 196
++G++ A++ ++ G+D
Sbjct: 537 KLGKLDTAWDILIRFAGKD 555
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 5/216 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MIAGYTQ ++KA+ T R+ L + + V L++ + AC+ ++ Q+H +
Sbjct: 562 MIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSG 621
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ ALV YS+ G I + F + +++ + ++ + Q G AL ++
Sbjct: 622 FSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFV 681
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M R GI + F + + A S + +G ++ + K TE + M +
Sbjct: 682 RMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKT-GYDSETEVCNALISMYAKC 740
Query: 181 GRVVEAYEFVKQLGEDGNVMEI-WGSILGACKNHGY 215
G + +A KQ E E+ W +I+ A HG+
Sbjct: 741 GSISDAE---KQFLEVSTKNEVSWNAIINAYSKHGF 773
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 8/152 (5%)
Query: 26 VIPNAVTLSSILPACSSTGSIAF--ATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISY 83
V PN T S +L AC GS+AF Q+H + + + L+D YS++G +
Sbjct: 182 VTPNEGTFSGVLEACRG-GSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDL 240
Query: 84 AENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSY 143
A VF+ + K+ ++ M+ ++ A+ L+ M GI P AF ++LSAC
Sbjct: 241 ARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKK 300
Query: 144 AGLVDEGLEIFESMVK-IHKIKPSTEHYCCVA 174
E LEI E + + K+ S++ Y C A
Sbjct: 301 I----ESLEIGEQLHGLVLKLGFSSDTYVCNA 328
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 1/157 (0%)
Query: 28 PNAVTLSSILPACSST-GSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAEN 86
PN TL +L C T GS+ +LH ++ +D N L D Y G + A
Sbjct: 82 PNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFK 141
Query: 87 VFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGL 146
VF+ MPE+ T+ M+ + L+ M+ + P+ F +L AC +
Sbjct: 142 VFDEMPERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSV 201
Query: 147 VDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRV 183
+ +E + + ++ ST + D+ R G V
Sbjct: 202 AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFV 238
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 208 bits (529), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 106/325 (32%), Positives = 188/325 (57%), Gaps = 5/325 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G+ QN ++ A+ + I TL+S+L AC+ + Q H +++
Sbjct: 231 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKY- 289
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
DQ++ ALVD Y K G++ A VFN+M E++ +T++TM+ Q+G + AL L++
Sbjct: 290 -DQDLILNNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFE 348
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M SG KP+ + V +L ACS+AGL+++G F SM K++ I P EHY C+ D+LG+
Sbjct: 349 RMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKA 408
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G++ +A + + ++ + + + W ++LGAC+ L + A+K+++++ E AG +
Sbjct: 409 GKLDDAVKLLNEMECEPDAV-TWRTLLGACRVQRNMVLAEYAAKKVIALDPED--AGTYT 465
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LLSNIYA +W++V+ +R ++ ++G+ KE GCS +E+ ++ F+ D HPQ E+
Sbjct: 466 LLSNIYANSQKWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSK 525
Query: 301 ILDKLTMDIKDAGYKTRYNSSLNEI 325
L++L + GY N L ++
Sbjct: 526 KLNQLIHRLTGIGYVPETNFVLQDL 550
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 112/232 (48%), Gaps = 8/232 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+ Y++ +++KA+ L L V PN T SS+L +C+ + LH I+
Sbjct: 133 MISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM---LHCGIIKEG 189
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ +V+ +AL+D ++K G A +VF+ M +++ + +++ + Q+ AL L+
Sbjct: 190 LESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFK 249
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M R+G + ++L AC+ L++ G+ ++ V I K + DM +
Sbjct: 250 RMKRAGFIAEQATLTSVLRACTGLALLELGM---QAHVHIVKYDQDLILNNALVDMYCKC 306
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETE 232
G + +A Q+ E + W +++ +GY + + E++ S T+
Sbjct: 307 GSLEDALRVFNQMKERDVI--TWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/281 (22%), Positives = 121/281 (43%), Gaps = 52/281 (18%)
Query: 24 HKVIPNAVTLSSILPACSSTGSI----AFATQLHGFSIRHFMDQNVYAGTALVDTYSKSG 79
H + ++ T S ++ C S ++ L+ R M + L++ Y K
Sbjct: 55 HGLWADSATYSELIKCCISNRAVHEGNLICRHLYFNGHRPMM----FLVNVLINMYVKFN 110
Query: 80 AISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILS 139
++ A +F++MP++N +++TTM+ +Y + + ++AL L MLR ++P+ + ++L
Sbjct: 111 LLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLR 170
Query: 140 ACS--------YAGLVDEGLE----IFESMVKIHKIKPSTEHYCCVADML---------- 177
+C+ + G++ EGLE + +++ + E V D +
Sbjct: 171 SCNGMSDVRMLHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNS 230
Query: 178 -----GRVGRVVEAYEFVKQLGEDGNVME--IWGSILGACKNHGYFELGKVVAEKLLSME 230
+ R A E K++ G + E S+L AC ELG M+
Sbjct: 231 IIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELG---------MQ 281
Query: 231 TEKRVAGY--HVLLSN----IYAEEGEWENVDRVRNQITEK 265
+ Y ++L+N +Y + G E+ RV NQ+ E+
Sbjct: 282 AHVHIVKYDQDLILNNALVDMYCKCGSLEDALRVFNQMKER 322
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 207 bits (528), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 176/306 (57%), Gaps = 3/306 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GYT G +A+ RE L + P+ ++L S+LP+C+ GS+ +H ++ R
Sbjct: 212 MISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRG 271
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ AL++ YSK G IS A +F +M K+ ++++TM+ Y HG A+ ++
Sbjct: 272 FLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAIETFN 331
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M R+ +KP+ + F+ +LSACS+ G+ EGL F+ M + ++I+P EHY C+ D+L R
Sbjct: 332 EMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARA 391
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G++ A E K + + +IWGS+L +C+ G ++ V + L+ +E E G +V
Sbjct: 392 GKLERAVEITKTMPMKPDS-KIWGSLLSSCRTPGNLDVALVAMDHLVELEPED--MGNYV 448
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LL+NIYA+ G+WE+V R+R I + + K G SL+E+ +V FVS D P EI
Sbjct: 449 LLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNSKPFWTEISI 508
Query: 301 ILDKLT 306
+L T
Sbjct: 509 VLQLFT 514
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 104/236 (44%), Gaps = 18/236 (7%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKV-IPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+I YT N L I ++ L +P+ T + +C+S GS Q+HG +
Sbjct: 79 IIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKF 138
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+V AL+D Y K + A VF+ M E++ +++ +++ Y + G ++A L+
Sbjct: 139 GPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLF 198
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
ML I V++ A++S + G E ++ F M ++ I+P V +
Sbjct: 199 HLMLDKTI----VSWTAMISGYTGIGCYVEAMDFFREM-QLAGIEPDEISLISVLPSCAQ 253
Query: 180 VGRV---------VEAYEFVKQLGEDGNVMEIW---GSILGACKNHGYFELGKVVA 223
+G + E F+KQ G ++E++ G I A + G E V++
Sbjct: 254 LGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVIS 309
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 86/190 (45%), Gaps = 12/190 (6%)
Query: 57 IRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRAL 116
I H + Q+ + T +VD K + YA +FN++ N Y +++ +Y + + +
Sbjct: 34 IIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVI 93
Query: 117 TLYDSMLRSGIK-PDAVAFVAILSACSYAGLVDEGLEIFESMVKI-HKIKPSTEHYCCVA 174
+Y +LR + PD F + +C+ G G ++ + K + TE+ +
Sbjct: 94 RIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTEN--ALI 151
Query: 175 DMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEK-LLSMETEK 233
DM + +V+A++ ++ E + W S+L GY LG++ K L + +K
Sbjct: 152 DMYMKFDDLVDAHKVFDEMYERDVIS--WNSLLS-----GYARLGQMKKAKGLFHLMLDK 204
Query: 234 RVAGYHVLLS 243
+ + ++S
Sbjct: 205 TIVSWTAMIS 214
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 206 bits (523), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/327 (34%), Positives = 179/327 (54%), Gaps = 3/327 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GY Q G + +A+ L V N V + S+L AC+ G++ H + R+
Sbjct: 211 MISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGALDQGRWAHSYIERNK 270
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ V T LVD Y+K G + A VF M EKN T+++ + +G G + L L+
Sbjct: 271 IKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFGEKCLELFS 330
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M + G+ P+AV FV++L CS G VDEG F+SM I+P EHY C+ D+ R
Sbjct: 331 LMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQLEHYGCLVDLYARA 390
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
GR+ +A ++Q+ + +W S+L A + + ELG + ++K+L +ET G +V
Sbjct: 391 GRLEDAVSIIQQMPMKPHA-AVWSSLLHASRMYKNLELGVLASKKMLELETANH--GAYV 447
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LLSNIYA+ +W+NV VR + KG+ K+ GCS++E+ G V+ F D+ HP+ +I
Sbjct: 448 LLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDA 507
Query: 301 ILDKLTMDIKDAGYKTRYNSSLNEIVE 327
+ ++ ++ AGYK + +I E
Sbjct: 508 VWKDISRRLRLAGYKADTTPVMFDIDE 534
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 110/250 (44%), Gaps = 36/250 (14%)
Query: 1 MIAGYTQNGLNEKAILTLREALL--HKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
MI + ++ + EK+ R L + + P+ T++ ++ AC+ Q+HG +IR
Sbjct: 77 MIRAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIR 136
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNR---------------------------- 90
D + + T L+ Y++ G + VFN
Sbjct: 137 RGFDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKL 196
Query: 91 ---MPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLV 147
MPE++ + + M+ Y Q G R AL ++ M G+K + VA +++LSAC+ G +
Sbjct: 197 FEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMISVLSACTQLGAL 256
Query: 148 DEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSIL 207
D+G S ++ +KIK + + D+ + G + +A E + E+ NV W S L
Sbjct: 257 DQG-RWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGM-EEKNVY-TWSSAL 313
Query: 208 GACKNHGYFE 217
+G+ E
Sbjct: 314 NGLAMNGFGE 323
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/328 (35%), Positives = 187/328 (57%), Gaps = 15/328 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFA------TQLHG 54
M+ G+ QN ++A+ + + VT++ + AC+ G+ +A Q G
Sbjct: 252 MVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSG 311
Query: 55 FSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRR 114
+S +V G+AL+D YSK G + A NVF M KN TY++M++ HG +
Sbjct: 312 YS----PSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQE 367
Query: 115 ALTLYDSML-RSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCV 173
AL L+ M+ ++ IKP+ V FV L ACS++GLVD+G ++F+SM + ++P+ +HY C+
Sbjct: 368 ALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRDHYTCM 427
Query: 174 ADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEK 233
D+LGR GR+ EA E +K + + + +WG++LGAC+ H E+ ++ AE L +E +
Sbjct: 428 VDLLGRTGRLQEALELIKTMSVEPH-GGVWGALLGACRIHNNPEIAEIAAEHLFELEPD- 485
Query: 234 RVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCS-LVEIGGLVNYFVSRDEKH 292
+ G ++LLSN+YA G+W V RVR I EKGL K S +V+ G ++ F + H
Sbjct: 486 -IIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNH 544
Query: 293 PQSGEIYDILDKLTMDIKDAGYKTRYNS 320
P S +I D L++L + GY+ +S
Sbjct: 545 PMSNKIQDKLEELVERLTVLGYQPDLSS 572
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHG--FSIR 58
+I GY G ++AI ++ P + T S++L AC + + Q H F +R
Sbjct: 120 VIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLR 179
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
F VY G ++D Y K +I A VF+ MPE++ +++T ++ +Y + G A L
Sbjct: 180 GFC--FVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAEL 237
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
++S+ D VA+ A+++ + E LE F+ M K
Sbjct: 238 FESLPTK----DMVAWTAMVTGFAQNAKPQEALEYFDRMEK 274
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Query: 32 TLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAI--SYAENVFN 89
+L S L C + I Q+HG +R +DQ+ Y T L+ T +K G YA V
Sbjct: 51 SLISKLDDCINLNQIK---QIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIE 107
Query: 90 RMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSAC 141
+ +N +T ++ Y G A+ +Y M + I P + F A+L AC
Sbjct: 108 PVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKAC 159
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 181/314 (57%), Gaps = 3/314 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI GY + G +++ RE +IP+ T+ S+L AC+ GS+ + + ++
Sbjct: 339 MIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNK 398
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ +V G AL+D Y K G A+ VF+ M +++ T+T M++ +G G+ A+ ++
Sbjct: 399 IKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVFF 458
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M I+PD + ++ +LSAC+++G+VD+ + F M H+I+PS HY C+ DMLGR
Sbjct: 459 QMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGRA 518
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G V EAYE ++++ + N + +WG++LGA + H + ++ A+K+L +E + +
Sbjct: 519 GLVKEAYEILRKMPMNPNSI-VWGALLGASRLHNDEPMAELAAKKILELEPDN--GAVYA 575
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LL NIYA W+++ VR +I + + K G SL+E+ G + FV+ D+ H QS EIY
Sbjct: 576 LLCNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIEVNGFAHEFVAGDKSHLQSEEIYM 635
Query: 301 ILDKLTMDIKDAGY 314
L++L + A Y
Sbjct: 636 KLEELAQESTFAAY 649
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 92/195 (47%), Gaps = 32/195 (16%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGF----- 55
MI+GY + E++I L E + V P +VTL +L ACS ++H +
Sbjct: 207 MISGYNRMKEYEESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECK 266
Query: 56 -----------------------SIRHFMD---QNVYAGTALVDTYSKSGAISYAENVFN 89
++R F ++V + T++V Y + G + A F+
Sbjct: 267 TEPSLRLENALVNAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFD 326
Query: 90 RMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDE 149
+MP ++ +++T M+ Y + G +L ++ M +G+ PD V++L+AC++ G ++
Sbjct: 327 QMPVRDRISWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEI 386
Query: 150 GLEIFESMVKIHKIK 164
G E ++ + +KIK
Sbjct: 387 G-EWIKTYIDKNKIK 400
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 1/143 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTG-SIAFATQLHGFSIRH 59
MI G+++ + + + L V P++ T +L G ++A +LH ++
Sbjct: 105 MIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLHCHVVKF 164
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ N+Y ALV YS G + A VF+R +++ ++ M+ Y + ++ L
Sbjct: 165 GLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELL 224
Query: 120 DSMLRSGIKPDAVAFVAILSACS 142
M R+ + P +V + +LSACS
Sbjct: 225 VEMERNLVSPTSVTLLLVLSACS 247
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 205 bits (521), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 102/314 (32%), Positives = 180/314 (57%), Gaps = 3/314 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+G QN +E+ I + RE + PN VTLSS+LP+ + + ++ ++H F+IR+
Sbjct: 337 MISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNG 396
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
D N+Y T+++D Y+K G + A+ VF+ +++ + +T ++ +Y HG A +L+D
Sbjct: 397 ADNNIYVTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFD 456
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M G KPD V A+LSA +++G D IF+SM+ + I+P EHY C+ +L R
Sbjct: 457 QMQCLGTKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRA 516
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G++ +A EF+ ++ D + ++WG++L G E+ + ++L ME E G +
Sbjct: 517 GKLSDAMEFISKMPID-PIAKVWGALLNGASVLGDLEIARFACDRLFEMEPEN--TGNYT 573
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
+++N+Y + G WE + VRN++ GL K G S +E + F+++D +S E+Y+
Sbjct: 574 IMANLYTQAGRWEEAEMVRNKMKRIGLKKIPGTSWIETEKGLRSFIAKDSSCERSKEMYE 633
Query: 301 ILDKLTMDIKDAGY 314
I++ L + D Y
Sbjct: 634 IIEGLVESMSDKEY 647
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 7/191 (3%)
Query: 28 PNAVTLSSILPACSSTGSI---AFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYA 84
P+++++S +L A S + A Q+HGF IR D +V+ G ++ Y+K I A
Sbjct: 127 PDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGFDSDVFVGNGMITYYTKCDNIESA 186
Query: 85 ENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLR-SGIKPDAVAFVAILSACSY 143
VF+ M E++ V++ +M+ Y Q G +Y +ML S KP+ V +++ AC
Sbjct: 187 RKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQ 246
Query: 144 AGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIW 203
+ + GLE+ + M++ H I+ V + G + A ++ E +V +
Sbjct: 247 SSDLIFGLEVHKKMIENH-IQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSV--TY 303
Query: 204 GSILGACKNHG 214
G+I+ HG
Sbjct: 304 GAIISGYMAHG 314
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 32/185 (17%)
Query: 1 MIAGYTQNGLNEKAILTLREAL-LHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
MI+GY+Q+G E + L PN VT+ S+ AC + + F ++H I +
Sbjct: 204 MISGYSQSGSFEDCKKMYKAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIEN 263
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ ++ A++ Y+K G++ YA +F+ M EK+SVTY ++ Y HG+ + A+ L+
Sbjct: 264 HIQMDLSLCNAVIGFYAKCGSLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALF 323
Query: 120 D-------------------------------SMLRSGIKPDAVAFVAILSACSYAGLVD 148
M+R G +P+ V ++L + +Y+ +
Sbjct: 324 SEMESIGLSTWNAMISGLMQNNHHEEVINSFREMIRCGSRPNTVTLSSLLPSLTYSSNLK 383
Query: 149 EGLEI 153
G EI
Sbjct: 384 GGKEI 388
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 204 bits (518), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 111/284 (39%), Positives = 169/284 (59%), Gaps = 10/284 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLH---KVIPNAVTLSSILPACSSTGSIAFATQLHGFSI 57
+I+G+ NG + L LL +++P+A TLS++L C ST S+ +Q H + +
Sbjct: 458 IISGFYHNGFPFEG-LERFSCLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVL 516
Query: 58 RHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
RH + G AL++ YS+ G I + VFN+M EK+ V++ +++ +Y +HG G A+
Sbjct: 517 RHGQFKETLIGNALINMYSQCGTIQNSLEVFNQMSEKDVVSWNSLISAYSRHGEGENAVN 576
Query: 118 LYDSMLRSG-IKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
Y +M G + PDA F A+LSACS+AGLV+EGLEIF SMV+ H + + +H+ C+ D+
Sbjct: 577 TYKTMQDEGKVIPDAATFSAVLSACSHAGLVEEGLEIFNSMVEFHGVIRNVDHFSCLVDL 636
Query: 177 LGRVGRVVEAYEFVKQLGED--GNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKR 234
LGR G + EA VK + E G+ +++W ++ AC HG +LGK+VA+ L ME EK
Sbjct: 637 LGRAGHLDEAESLVK-ISEKTIGSRVDVWWALFSACAAHGDLKLGKMVAKLL--MEKEKD 693
Query: 235 VAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEI 278
+V LSNIYA G W+ + R I G K+ GCS + +
Sbjct: 694 DPSVYVQLSNIYAGAGMWKEAEETRRAINMIGAMKQRGCSWMRL 737
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 72/138 (52%), Gaps = 7/138 (5%)
Query: 2 IAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFM 61
+AG+ + ++++L R+ L + P +T S++ +CS A Q+HG +I+
Sbjct: 267 LAGFKR----DESLLVFRKMLEASLRPTDLTFVSVMGSCSCA---AMGHQVHGLAIKTGY 319
Query: 62 DQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDS 121
++ A + YS A VF + EK+ VT+ TM+ SY Q +G+ A+++Y
Sbjct: 320 EKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKR 379
Query: 122 MLRSGIKPDAVAFVAILS 139
M G+KPD F ++L+
Sbjct: 380 MHIIGVKPDEFTFGSLLA 397
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 93/216 (43%), Gaps = 8/216 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+ Y Q L + A+ + + V P+ T S+L +++ + + I+
Sbjct: 360 MISSYNQAKLGKSAMSVYKRMHIIGVKPDEFTFGSLL---ATSLDLDVLEMVQACIIKFG 416
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + AL+ YSK+G I A+ +F R KN +++ ++ + +G L +
Sbjct: 417 LSSKIEISNALISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFS 476
Query: 121 SMLRSGIK--PDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+L S ++ PDA +LS C + G + +++ + K + + +M
Sbjct: 477 CLLESEVRILPDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALI-NMYS 535
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
+ G + + E Q+ E V W S++ A HG
Sbjct: 536 QCGTIQNSLEVFNQMSEKDVVS--WNSLISAYSRHG 569
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 62 DQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVT-YTTMMMSYGQHGMGRRALTLYD 120
+ +VY+ T L+ K G I YA VF++MPE++ V + M+ + G ++ L+
Sbjct: 120 EPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFR 179
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
M + G++ D F ILS C Y G +D G ++ ++K
Sbjct: 180 EMHKLGVRHDKFGFATILSMCDY-GSLDFGKQVHSLVIK 217
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/290 (36%), Positives = 164/290 (56%), Gaps = 3/290 (1%)
Query: 25 KVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYA 84
+V+P+ T LP C+S + ++H +R + + G AL++ YSK G + +
Sbjct: 504 EVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENS 563
Query: 85 ENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYA 144
VF RM ++ VT+T M+ +YG +G G +AL + M +SGI PD+V F+AI+ ACS++
Sbjct: 564 SRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHS 623
Query: 145 GLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWG 204
GLVDEGL FE M +KI P EHY CV D+L R ++ +A EF++ + + IW
Sbjct: 624 GLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDA-SIWA 682
Query: 205 SILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITE 264
S+L AC+ G E + V+ +++ + + GY +L SN YA +W+ V +R + +
Sbjct: 683 SVLRACRTSGDMETAERVSRRIIELNPDD--PGYSILASNAYAALRKWDKVSLIRKSLKD 740
Query: 265 KGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYDILDKLTMDIKDAGY 314
K + K G S +E+G V+ F S D+ PQS IY L+ L + GY
Sbjct: 741 KHITKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGY 790
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 79/153 (51%), Gaps = 6/153 (3%)
Query: 1 MIAGYTQNGLNEKAIL---TLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSI 57
+I +++NGL +A+ LRE+ KV P+ T S++ AC+ ++ +
Sbjct: 77 IIRAFSKNGLFPEALEFYGKLRES---KVSPDKYTFPSVIKACAGLFDAEMGDLVYEQIL 133
Query: 58 RHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
+ +++ G ALVD YS+ G ++ A VF+ MP ++ V++ +++ Y HG AL
Sbjct: 134 DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALE 193
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEG 150
+Y + S I PD+ ++L A +V +G
Sbjct: 194 IYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQG 226
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 121/279 (43%), Gaps = 18/279 (6%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI GY + + E+++ E L + P+ +T+SS+L AC ++ A ++ + ++
Sbjct: 279 MICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAG 337
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
L+D Y+K G + A +VFN M K++V++ +++ Y Q G A+ L+
Sbjct: 338 FVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFK 397
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+ + D + ++ ++S + + G + + +K I + DM +
Sbjct: 398 MMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIK-SGICIDLSVSNALIDMYAKC 456
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G V ++ + +G V W +++ AC G F G V ++ E +A + V
Sbjct: 457 GEVGDSLKIFSSMGTGDTV--TWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLV 514
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIG 279
L + + K L KE+ C L+ G
Sbjct: 515 TLPMCAS--------------LAAKRLGKEIHCCLLRFG 539
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 109/230 (47%), Gaps = 10/230 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+GY+ +G E+A+ E ++P++ T+SS+LPA + + LHGF+++
Sbjct: 178 LISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSG 237
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ V LV Y K + A VF+ M ++SV+Y TM+ Y + M ++ ++
Sbjct: 238 VNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFL 297
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
L KPD + ++L AC + + I+ M+K + ST + D+ +
Sbjct: 298 ENL-DQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILI-DVYAKC 355
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVV-AEKLLSM 229
G ++ A + + V W SI+ GY + G ++ A KL M
Sbjct: 356 GDMITARDVFNSMECKDTVS--WNSIIS-----GYIQSGDLMEAMKLFKM 398
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 93/186 (50%), Gaps = 16/186 (8%)
Query: 39 ACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRM-PEKNSV 97
A SS+ ++ ++H I +D + + L+D YS + + +VF R+ P KN
Sbjct: 13 ALSSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVY 72
Query: 98 TYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDE--GLEIFE 155
+ +++ ++ ++G+ AL Y + S + PD F +++ AC AGL D G ++E
Sbjct: 73 LWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDAEMGDLVYE 130
Query: 156 SMVKIHKIKPSTEHYC--CVADMLGRVGRVVEAYEFVKQLGEDGNVMEI--WGSILGACK 211
+I + ++ + + DM R+G + A +Q+ ++ V ++ W S++
Sbjct: 131 ---QILDMGFESDLFVGNALVDMYSRMGLLTRA----RQVFDEMPVRDLVSWNSLISGYS 183
Query: 212 NHGYFE 217
+HGY+E
Sbjct: 184 SHGYYE 189
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 104/310 (33%), Positives = 183/310 (59%), Gaps = 4/310 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M AGY Q NE+A+ E L + P+ T ++++ A + S+ + H ++
Sbjct: 526 MFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRG 585
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ N Y AL+D Y+K G+ A F+ ++ V + +++ SY HG G++AL + +
Sbjct: 586 LECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLE 645
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+ GI+P+ + FV +LSACS+AGLV++GL+ FE M++ I+P TEHY C+ +LGR
Sbjct: 646 KMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRF-GIEPETEHYVCMVSLLGRA 704
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
GR+ +A E ++++ + +W S+L C G EL + AE +++ ++ + +G
Sbjct: 705 GRLNKARELIEKMPTKPAAI-VWRSLLSGCAKAGNVELAEHAAE--MAILSDPKDSGSFT 761
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
+LSNIYA +G W +VR ++ +G+ KE G S + I V+ F+S+D+ H ++ +IY+
Sbjct: 762 MLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYE 821
Query: 301 ILDKLTMDIK 310
+LD L + I+
Sbjct: 822 VLDDLLVQIR 831
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 108/217 (49%), Gaps = 6/217 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREAL-LHKVIPNAVTLSSILPACSSTGSIA--FATQLHGFSI 57
M++ +G+ E++++ E K PN LSS + ACS QL F +
Sbjct: 116 MVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLV 175
Query: 58 RHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
+ D++VY GT L+D Y K G I YA VF+ +PEK++VT+TTM+ + G +L
Sbjct: 176 KSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQ 235
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADML 177
L+ ++ + PD +LSACS ++ G +I +++ + ++ + D
Sbjct: 236 LFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILR-YGLEMDASLMNVLIDSY 294
Query: 178 GRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
+ GRV+ A++ + + N++ W ++L K +
Sbjct: 295 VKCGRVIAAHKLFNGM-PNKNIIS-WTTLLSGYKQNA 329
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 81/142 (57%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+G + G + ++ + + V+P+ LS++L ACS + Q+H +R+
Sbjct: 220 MISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYG 279
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ + L+D+Y K G + A +FN MP KN +++TT++ Y Q+ + + A+ L+
Sbjct: 280 LEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFT 339
Query: 121 SMLRSGIKPDAVAFVAILSACS 142
SM + G+KPD A +IL++C+
Sbjct: 340 SMSKFGLKPDMYACSSILTSCA 361
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 108/231 (46%), Gaps = 6/231 (2%)
Query: 1 MIAGYTQNGLN---EKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSI 57
MI GY++ G +A+ R+ + P+ +T S+L A +S S+ + Q+HG
Sbjct: 422 MIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMF 481
Query: 58 RHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
++ ++ +++AG+AL+D YS + + VF+ M K+ V + +M Y Q AL
Sbjct: 482 KYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALN 541
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADML 177
L+ + S +PD F +++A V G E ++K ++ + + DM
Sbjct: 542 LFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLK-RGLECNPYITNALLDMY 600
Query: 178 GRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLS 228
+ G +A++ V W S++ + NHG + + EK++S
Sbjct: 601 AKCGSPEDAHKAFDSAASRDVV--CWNSVISSYANHGEGKKALQMLEKMMS 649
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 78/154 (50%), Gaps = 5/154 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+++GY QN L+++A+ + P+ SSIL +C+S ++ F TQ+H ++I+
Sbjct: 321 LLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKAN 380
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMG---RRALT 117
+ + Y +L+D Y+K ++ A VF+ + V + M+ Y + G AL
Sbjct: 381 LGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALN 440
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGL 151
++ M I+P + FV++L A A L GL
Sbjct: 441 IFRDMRFRLIRPSLLTFVSLLRAS--ASLTSLGL 472
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 108/252 (42%), Gaps = 45/252 (17%)
Query: 33 LSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMP 92
+ +L +S + + +HG I ++ + Y L++ YS++G + YA VF +MP
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 93 EKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRS-GIKPDAVAFVAILSACS--------- 142
E+N V+++TM+ + HG+ +L ++ R+ P+ + + ACS
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWM 166
Query: 143 -----------------YAG--LVDEGLE---------IFESMVKIHKIKPSTEHYCCVA 174
Y G L+D L+ +F+++ + + +T CV
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCV- 225
Query: 175 DMLGRVGRVVEAYEFVKQLGEDGNVME--IWGSILGACKNHGYFELGKVVAEKLLSMETE 232
++GR + + QL ED V + I ++L AC + E GK + +L E
Sbjct: 226 ----KMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLE 281
Query: 233 KRVAGYHVLLSN 244
+ +VL+ +
Sbjct: 282 MDASLMNVLIDS 293
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/330 (33%), Positives = 182/330 (55%), Gaps = 3/330 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M+ GY Q G E+A+ + + P+ TL + AC++ S+ +Q HG +I
Sbjct: 342 MVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSG 401
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ V +LV Y K G I + +FN M +++V++T M+ +Y Q G + L+D
Sbjct: 402 LIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFD 461
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M++ G+KPD V ++SACS AGLV++G F+ M + I PS HY C+ D+ R
Sbjct: 462 KMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRS 521
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
GR+ EA F+ + + + W ++L AC+N G E+GK AE L+ ++ AGY
Sbjct: 522 GRLEEAMRFINGMPFPPDAIG-WTTLLSACRNKGNLEIGKWAAESLIELDPH-HPAGY-T 578
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LLS+IYA +G+W++V ++R + EK + KE G S ++ G ++ F + DE P +IY
Sbjct: 579 LLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQIYA 638
Query: 301 ILDKLTMDIKDAGYKTRYNSSLNEIVETVE 330
L++L I D GYK + +++ E V+
Sbjct: 639 KLEELNNKIIDNGYKPDTSFVHHDVEEAVK 668
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 111/226 (49%), Gaps = 16/226 (7%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI G QNGL ++AI RE + + + S+LPAC G+I Q+H IR
Sbjct: 241 MIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN 300
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++Y G+AL+D Y K + YA+ VF+RM +KN V++T M++ YGQ G A+ ++
Sbjct: 301 FQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFL 360
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADML--- 177
M RSGI PD +SAC+ ++EG S I HY V++ L
Sbjct: 361 DMQRSGIDPDHYTLGQAISACANVSSLEEG-----SQFHGKAITSGLIHYVTVSNSLVTL 415
Query: 178 -GRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVV 222
G+ G + ++ ++ V W +++ A Y + G+ V
Sbjct: 416 YGKCGDIDDSTRLFNEMNVRDAVS--WTAMVSA-----YAQFGRAV 454
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 9/190 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPN--AVTLSSILPACSSTGSIAFATQLHGFSIR 58
+I GY+ +GL A+ ++ N VTL ++L SS G ++ Q+HG I+
Sbjct: 109 LIEGYSLSGLVGAAVKAY-NTMMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIK 167
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+ + G+ L+ Y+ G IS A+ VF + ++N+V Y ++M GM AL L
Sbjct: 168 LGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQL 227
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+ G++ D+V++ A++ + GL E +E F M K+ +K + V G
Sbjct: 228 F-----RGMEKDSVSWAAMIKGLAQNGLAKEAIECFREM-KVQGLKMDQYPFGSVLPACG 281
Query: 179 RVGRVVEAYE 188
+G + E +
Sbjct: 282 GLGAINEGKQ 291
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 12/159 (7%)
Query: 64 NVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSML 123
N+++ L+ YSK+G IS E+ F ++P+++ VT+ ++ Y G+ A+ Y++M+
Sbjct: 71 NLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMM 130
Query: 124 RS-GIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD----MLG 178
R V + +L S G V G +I ++K+ E Y V M
Sbjct: 131 RDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKL-----GFESYLLVGSPLLYMYA 185
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFE 217
VG + +A + L + VM + S++G G E
Sbjct: 186 NVGCISDAKKVFYGLDDRNTVM--YNSLMGGLLACGMIE 222
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 103/305 (33%), Positives = 170/305 (55%), Gaps = 3/305 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI G Q + A+ +E P+ +T+ L ACS G++ +H + ++
Sbjct: 360 MIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEKYS 419
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ NV GT+LVD Y+K G IS A +VF+ + +NS+TYT ++ HG A++ ++
Sbjct: 420 LSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISYFN 479
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+ +GI PD + F+ +LSAC + G++ G + F M + P +HY + D+LGR
Sbjct: 480 EMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLGRA 539
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + EA ++ + + + +WG++L C+ HG ELG+ A+KLL ++ +G +V
Sbjct: 540 GLLEEADRLMESMPMEADA-AVWGALLFGCRMHGNVELGEKAAKKLLELDPSD--SGIYV 596
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LL +Y E WE+ R R + E+G+ K GCS +E+ G+V F+ RD+ P+S +IYD
Sbjct: 597 LLDGMYGEANMWEDAKRARRMMNERGVEKIPGCSSIEVNGIVCEFIVRDKSRPESEKIYD 656
Query: 301 ILDKL 305
L L
Sbjct: 657 RLHCL 661
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 94/217 (43%), Gaps = 32/217 (14%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GY + G EKAI + V P+ VT+ ++ +CS G + + + + +
Sbjct: 228 LINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENG 287
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGM--------- 111
+ + AL+D +SK G I A +F+ + ++ V++TTM+ Y + G+
Sbjct: 288 LRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFD 347
Query: 112 ----------------------GRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDE 149
G+ AL L+ M S KPD + + LSACS G +D
Sbjct: 348 DMEEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDV 407
Query: 150 GLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEA 186
G+ I + K + + + + DM + G + EA
Sbjct: 408 GIWIHRYIEK-YSLSLNVALGTSLVDMYAKCGNISEA 443
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 117/255 (45%), Gaps = 13/255 (5%)
Query: 2 IAGYTQNGLNEKAILTLREALLHKVI---PNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
I G++++ +++ L ++ L H P+ T + C+ + + G ++
Sbjct: 125 IRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMILGHVLK 184
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
++ + A + ++ G + A VF+ P ++ V++ ++ Y + G +A+ +
Sbjct: 185 LRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGEAEKAIYV 244
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
Y M G+KPD V + ++S+CS G ++ G E +E VK + ++ + + DM
Sbjct: 245 YKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYE-YVKENGLRMTIPLVNALMDMFS 303
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKV-VAEKLLSMETEKRVAG 237
+ G + EA L + + W +++ GY G + V+ KL EK V
Sbjct: 304 KCGDIHEARRIFDNL--EKRTIVSWTTMIS-----GYARCGLLDVSRKLFDDMEEKDVVL 356
Query: 238 YHVLL-SNIYAEEGE 251
++ ++ ++ A+ G+
Sbjct: 357 WNAMIGGSVQAKRGQ 371
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/279 (36%), Positives = 168/279 (60%), Gaps = 5/279 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR-- 58
+I+G++QNG +A+ V PN VT++S+ AC+S GS+A + LH +S++
Sbjct: 414 IISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLG 473
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+V+ GTAL+D Y+K G A +F+ + EKN++T++ M+ YG+ G +L L
Sbjct: 474 FLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGGYGKQGDTIGSLEL 533
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
++ ML+ KP+ F +ILSAC + G+V+EG + F SM K + PST+HY C+ DML
Sbjct: 534 FEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTPSTKHYTCMVDMLA 593
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
R G + +A + ++++ +V +G+ L C H F+LG++V +K+L + + A Y
Sbjct: 594 RAGELEQALDIIEKMPIQPDV-RCFGAFLHGCGMHSRFDLGEIVIKKMLDLHPDD--ASY 650
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVE 277
+VL+SN+YA +G W VRN + ++GL K G S +E
Sbjct: 651 YVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 4/157 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MIAGY +N L E+ ++ + V+ N T +++ AC+ ++ HG ++
Sbjct: 213 MIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSG 272
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ + T+L+D Y K G IS A VFN + V +T M++ Y +G AL+L+
Sbjct: 273 IELSSCLVTSLLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQ 332
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESM 157
M IKP+ V ++LS C GL+ E LE+ S+
Sbjct: 333 KMKGVEIKPNCVTIASVLSGC---GLI-ENLELGRSV 365
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 11/236 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR-H 59
MI GYT NG +A+ ++ ++ PN VT++S+L C ++ +HG SI+
Sbjct: 314 MIVGYTHNGSVNEALSLFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVG 373
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
D NV ALV Y+K A+ VF EK+ V + +++ + Q+G AL L+
Sbjct: 374 IWDTNV--ANALVHMYAKCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLF 431
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHY-CCVADMLG 178
M + P+ V ++ SAC+ G + G + VK+ + S+ H + D
Sbjct: 432 HRMNSESVTPNGVTVASLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYA 491
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKR 234
+ G A + E + W +++G GY + G + L E K+
Sbjct: 492 KCGDPQSARLIFDTIEEKNTI--TWSAMIG-----GYGKQGDTIGSLELFEEMLKK 540
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 9/155 (5%)
Query: 36 ILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKN 95
+L C++ S+ Q HG + + ++ T LV Y G A VF+++PE +
Sbjct: 50 LLSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPD 106
Query: 96 SVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFE 155
+ M+ Y + + LYD +++ G + D + F L AC+ +D G +I
Sbjct: 107 FYLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHC 166
Query: 156 SMVKIHKIKPSTEHYCCVA--DMLGRVGRVVEAYE 188
+VK+ PS ++ DM + G + A++
Sbjct: 167 QLVKV----PSFDNVVLTGLLDMYAKCGEIKSAHK 197
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Query: 31 VTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNR 90
+ S L AC+ + ++H ++ NV T L+D Y+K G I A VFN
Sbjct: 143 IVFSKALKACTELQDLDNGKKIHCQLVKVPSFDNVVL-TGLLDMYAKCGEIKSAHKVFND 201
Query: 91 MPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEG 150
+ +N V +T+M+ Y ++ + L L++ M + + + + ++ AC+ + +G
Sbjct: 202 ITLRNVVCWTSMIAGYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQG 261
Query: 151 LEIFESMVK 159
+VK
Sbjct: 262 KWFHGCLVK 270
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 113/331 (34%), Positives = 185/331 (55%), Gaps = 6/331 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+G QNG E A++ R+ + + PN+ TLSS L CS+ Q+HG ++
Sbjct: 339 LISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYG 398
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
D++ YAG+ L+D Y K G A VF+ + E + ++ TM+ SY Q+G GR AL L++
Sbjct: 399 FDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFE 458
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+ G++P+ V +++L AC+ + LV+EG E+F+S K KI + +HY C+ D+LGR
Sbjct: 459 RMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRK-DKIMLTNDHYACMVDLLGRA 517
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
GR+ EA ++ V+ W ++L ACK H E+ + + K+L E E G +
Sbjct: 518 GRLEEAEMLTTEVINPDLVL--WRTLLSACKVHRKVEMAERITRKIL--EIEPGDEGTLI 573
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDE-KHPQSGEIY 299
L+SN+YA G+W V +++++ + L K S VEI + F++ D HP S +I
Sbjct: 574 LMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQIL 633
Query: 300 DILDKLTMDIKDAGYKTRYNSSLNEIVETVE 330
+ L++L KD GY + ++ ET +
Sbjct: 634 ENLEELIKKSKDLGYVEDKSCVFQDMEETAK 664
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 78/153 (50%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GY+Q G + +A+ + L+ KV PN T +S+L +C + I +HG ++
Sbjct: 238 LIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSG 297
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + + T+L+ Y + + + VF + N V++T+++ Q+G AL +
Sbjct: 298 FESALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFR 357
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEI 153
M+R IKP++ + L CS + +EG +I
Sbjct: 358 KMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQI 390
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IA ++ +++A+ R + + V+P+ TLSS+ A S A + HG ++
Sbjct: 136 LIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVILG 195
Query: 61 MD-QNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
++ NV+ G+ALVD Y K G A+ V +R+ EK+ V T +++ Y Q G A+ +
Sbjct: 196 LEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVKAF 255
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
SML ++P+ + ++L +C + G I MVK
Sbjct: 256 QSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVK 295
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 33 LSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMP 92
S +L C SI+ + ++ + +G+ LVD K G I YA VF+ M
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSGFPAEI-SGSKLVDASLKCGDIDYARQVFDGMS 126
Query: 93 EKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEG 150
E++ VT+ +++ +H + A+ +Y M+ + + PD ++ A S L E
Sbjct: 127 ERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA 184
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/320 (35%), Positives = 178/320 (55%), Gaps = 9/320 (2%)
Query: 1 MIAGYTQNGLNEKAILTLRE--ALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
MI Y QN +AI R A L N L+S++ ACSS G + + HG R
Sbjct: 205 MITAYAQNARGHEAIELFRSFNAALTSDRANQFMLASVISACSSLGRLQWGKVAHGLVTR 264
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+ N T+L+D Y+K G++S AE +F R+ + ++YT+M+M+ +HG+G A+ L
Sbjct: 265 GGYESNTVVATSLLDMYAKCGSLSCAEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKL 324
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+D M+ I P+ V + +L ACS++GLV+EGLE M + + + P + HY CV DMLG
Sbjct: 325 FDEMVAGRINPNYVTLLGVLHACSHSGLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLG 384
Query: 179 RVGRVVEAYEFVKQL---GEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRV 235
R GRV EAYE K + E G ++ WG++L A + HG E+ +++L+ ++ ++V
Sbjct: 385 RFGRVDEAYELAKTIEVGAEQGALL--WGALLSAGRLHGRVEIVSEASKRLI--QSNQQV 440
Query: 236 AGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQS 295
++ LSN YA G WE+ + +R ++ G KE CS +E V F + D +S
Sbjct: 441 TSAYIALSNAYAVSGGWEDSESLRLEMKRSGNVKERACSWIENKDSVYVFHAGDLSCDES 500
Query: 296 GEIYDILDKLTMDIKDAGYK 315
GEI L L +K+ G++
Sbjct: 501 GEIERFLKDLEKRMKERGHR 520
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK---VIPNAVTLSSILPACSSTGSIAFATQLHGFSI 57
+I+GY G + A+ ++ +H+ V PN T +S+ ACS+ +H
Sbjct: 101 VISGYNDMGKPQNALSMFQK--MHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLE 158
Query: 58 RHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMP--EKNSVTYTTMMMSYGQHGMGRRA 115
+ +N+ ++LVD Y K + A VF+ M +N V++T+M+ +Y Q+ G A
Sbjct: 159 ISGLRRNIVVSSSLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEA 218
Query: 116 LTLYDSMLRSGIKPDAVAFV--AILSACSYAGLVDEG 150
+ L+ S + A F+ +++SACS G + G
Sbjct: 219 IELFRSFNAALTSDRANQFMLASVISACSSLGRLQWG 255
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 109/321 (33%), Positives = 187/321 (58%), Gaps = 13/321 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAF--ATQLHGFSIR 58
MI+G+ QNG + +A+ A + +PN T S+L A + I+ + H ++
Sbjct: 444 MISGFAQNGFSHEALKMFLSAAA-ETMPNEYTFGSVLNAIAFAEDISVKQGQRCHAHLLK 502
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
++ +AL+D Y+K G I +E VFN M +KN +T+++ +Y HG + L
Sbjct: 503 LGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIISAYSSHGDFETVMNL 562
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+ M++ + PD V F+++L+AC+ G+VD+G EIF M++++ ++PS EHY C+ DMLG
Sbjct: 563 FHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLG 622
Query: 179 RVGRVVEAYEFVKQL-GEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAG 237
R GR+ EA E + ++ G G M S+LG+C+ HG ++G VAE L+ME + ++G
Sbjct: 623 RAGRLKEAEELMSEVPGGPGESM--LQSMLGSCRLHGNVKMGAKVAE--LAMEMKPELSG 678
Query: 238 YHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGG-----LVNYFVSRDEKH 292
+V + NIYAE+ EW+ +R + +K + KE G S +++G + F S D+ H
Sbjct: 679 SYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSH 738
Query: 293 PQSGEIYDILDKLTMDIKDAG 313
P+S EIY +++ + +++ G
Sbjct: 739 PKSDEIYRMVEIIGLEMNLEG 759
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 108/219 (49%), Gaps = 15/219 (6%)
Query: 1 MIAGYTQNG-LNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+++G +Q G +A++ R+ + V + V+ +S++ C + A Q+HG I+
Sbjct: 246 LLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKR 305
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ + G L+ YSK G + ++VF++M E+N V++TTM+ S A++++
Sbjct: 306 GYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDD-----AVSIF 360
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKI-KPSTEHYCCVADMLG 178
+M G+ P+ V FV +++A + EGL+I +K + +PS V +
Sbjct: 361 LNMRFDGVYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPS------VGNSFI 414
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEI--WGSILGACKNHGY 215
+ EA E K+ ED EI W +++ +G+
Sbjct: 415 TLYAKFEALEDAKKAFEDITFREIISWNAMISGFAQNGF 453
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 75/144 (52%), Gaps = 4/144 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+++G+ N + ++ ++ A V+ +A T S+ L C + QL ++
Sbjct: 148 ILSGFDDNQIALNFVVRMKSA---GVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVKTG 204
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHG-MGRRALTLY 119
++ ++ G + + YS+SG+ A VF+ M K+ +++ +++ Q G G A+ ++
Sbjct: 205 LESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVVIF 264
Query: 120 DSMLRSGIKPDAVAFVAILSACSY 143
M+R G++ D V+F ++++ C +
Sbjct: 265 RDMMREGVELDHVSFTSVITTCCH 288
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 85/194 (43%), Gaps = 6/194 (3%)
Query: 26 VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAE 85
V PN VT ++ A I ++HG I+ G + + Y+K A+ A+
Sbjct: 368 VYPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAK 427
Query: 86 NVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAG 145
F + + +++ M+ + Q+G AL ++ S + P+ F ++L+A ++A
Sbjct: 428 KAFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAE 486
Query: 146 --LVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIW 203
V +G ++K+ + + DM + G + E+ + ++ + +W
Sbjct: 487 DISVKQGQRCHAHLLKL-GLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQF--VW 543
Query: 204 GSILGACKNHGYFE 217
SI+ A +HG FE
Sbjct: 544 TSIISAYSSHGDFE 557
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/306 (36%), Positives = 175/306 (57%), Gaps = 14/306 (4%)
Query: 26 VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAG-----TALVDTYSKSGA 80
V P+ VT L AC++ G++ F Q+H F +D+N +G LV YS+ G+
Sbjct: 213 VKPDGVTCLLALQACANLGALDFGKQVHDF-----IDENGLSGALNLSNTLVSMYSRCGS 267
Query: 81 ISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSA 140
+ A VF M E+N V++T ++ +G G+ A+ ++ ML+ GI P+ +LSA
Sbjct: 268 MDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSA 327
Query: 141 CSYAGLVDEGLEIFESMVK-IHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNV 199
CS++GLV EG+ F+ M KIKP+ HY CV D+LGR + +AY +K + E
Sbjct: 328 CSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSM-EMKPD 386
Query: 200 MEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVR 259
IW ++LGAC+ HG ELG+ V L+ ++ E+ AG +VLL N Y+ G+WE V +R
Sbjct: 387 STIWRTLLGACRVHGDVELGERVISHLIELKAEE--AGDYVLLLNTYSTVGKWEKVTELR 444
Query: 260 NQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYDILDKLTMDIKDAGYKTRYN 319
+ + EK +H + GCS +E+ G V+ F+ D HP+ EIY +L ++ +K AGY
Sbjct: 445 SLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEIT 504
Query: 320 SSLNEI 325
S L+ +
Sbjct: 505 SELHNL 510
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 87/190 (45%), Gaps = 6/190 (3%)
Query: 29 NAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVF 88
N ++ S L C +G + Q+HG + T L+D YS + A VF
Sbjct: 112 NPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVF 171
Query: 89 NRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSM---LRSGIKPDAVAFVAILSACSYAG 145
+ +P++++V++ + Y ++ R L L+D M + +KPD V + L AC+ G
Sbjct: 172 DEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLG 231
Query: 146 LVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGS 205
+D G ++ + + + + + + M R G + +AY+ + E NV+ W +
Sbjct: 232 ALDFGKQVHD-FIDENGLSGALNLSNTLVSMYSRCGSMDKAYQVFYGMRER-NVVS-WTA 288
Query: 206 ILGACKNHGY 215
++ +G+
Sbjct: 289 LISGLAMNGF 298
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 185/330 (56%), Gaps = 3/330 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GY Q +N++A+ E V P+ V+L++ L AC+ G++ +H + +
Sbjct: 218 MISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTR 277
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + G L+D Y+K G + A VF + +K+ +T ++ Y HG GR A++ +
Sbjct: 278 IRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFM 337
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M + GIKP+ + F A+L+ACSY GLV+EG IF SM + + +KP+ EHY C+ D+LGR
Sbjct: 338 EMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRA 397
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + EA F++++ N + IWG++L AC+ H ELG+ + E L++++ G +V
Sbjct: 398 GLLDEAKRFIQEMPLKPNAV-IWGALLKACRIHKNIELGEEIGEILIAIDPYH--GGRYV 454
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
+NI+A + +W+ R + E+G+ K GCS + + G + F++ D HP+ +I
Sbjct: 455 HKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQS 514
Query: 301 ILDKLTMDIKDAGYKTRYNSSLNEIVETVE 330
+ +++ GY L ++V+ E
Sbjct: 515 KWRIMRRKLEENGYVPELEEMLLDLVDDDE 544
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 122/261 (46%), Gaps = 37/261 (14%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI G++ + E+++L + L NA T S+L ACS+ + TQ+H +
Sbjct: 86 MIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQITKLG 145
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMP---------------------------- 92
+ +VYA +L+++Y+ +G A +F+R+P
Sbjct: 146 YENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFR 205
Query: 93 ---EKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDE 149
EKN++++TTM+ Y Q M + AL L+ M S ++PD V+ LSAC+ G +++
Sbjct: 206 KMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQ 265
Query: 150 GLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGA 209
G I + K +I+ + C + DM + G + EA E K + + ++ W +++
Sbjct: 266 GKWIHSYLNKT-RIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS--VQAWTALISG 322
Query: 210 CKNHGYFELGKVVAEKLLSME 230
HG+ G+ K + M+
Sbjct: 323 YAYHGH---GREAISKFMEMQ 340
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 201 bits (512), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 103/303 (33%), Positives = 174/303 (57%), Gaps = 3/303 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IA Y QNG N A+ +E ++P++ T++SILPA + + S++ ++H + ++
Sbjct: 402 IIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSR 461
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
N +LV Y+ G + A FN + K+ V++ +++M+Y HG GR ++ L+
Sbjct: 462 YWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFS 521
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+ S + P+ F ++L+ACS +G+VDEG E FESM + + I P EHY C+ D++GR
Sbjct: 522 EMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRT 581
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G A F++++ IWGS+L A +NH + + AE++ ME + G +V
Sbjct: 582 GNFSAAKRFLEEMPFVPTA-RIWGSLLNASRNHKDITIAEFAAEQIFKMEHDN--TGCYV 638
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LL N+YAE G WE+V+R++ + KG+ + S VE G + F + D H + +IY+
Sbjct: 639 LLLNMYAEAGRWEDVNRIKLLMESKGISRTSSRSTVEAKGKSHVFTNGDRSHVATNKIYE 698
Query: 301 ILD 303
+LD
Sbjct: 699 VLD 701
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 138/290 (47%), Gaps = 15/290 (5%)
Query: 1 MIAGYTQNGLNEKAILTLRE-ALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
MI Y +NG A L ++ + + + P+ +T ++LPA +I +HG+++R
Sbjct: 304 MIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRR 359
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
++ TAL+D Y + G + AE +F+RM EKN +++ +++ +Y Q+G AL L+
Sbjct: 360 GFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELF 419
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
+ S + PD+ +IL A + + + EG EI +VK + +T + M
Sbjct: 420 QELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVK-SRYWSNTIILNSLVHMYAM 478
Query: 180 VGRVVEAYE-FVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
G + +A + F L +D + W SI+ A HG+ + + ++++ + +
Sbjct: 479 CGDLEDARKCFNHILLKD---VVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTF 535
Query: 239 HVLLSNI----YAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNY 284
LL+ +EG WE + ++ + + GC L IG N+
Sbjct: 536 ASLLAACSISGMVDEG-WEYFESMKREYGIDPGIEHYGCMLDLIGRTGNF 584
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 107/224 (47%), Gaps = 13/224 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GY G +++ +E L P+ + S L ACS S ++H ++R
Sbjct: 202 MISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSR 261
Query: 61 MDQ-NVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
++ +V T+++D YSK G +SYAE +FN M ++N V + M+ Y ++G A +
Sbjct: 262 IETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCF 321
Query: 120 DSML-RSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
M ++G++PD + + +L A + + EG I ++ P + DM G
Sbjct: 322 QKMSEQNGLQPDVITSINLLPASA----ILEGRTIHGYAMR-RGFLPHMVLETALIDMYG 376
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGAC----KNHGYFEL 218
G++ A ++ E NV+ W SI+ A KN+ EL
Sbjct: 377 ECGQLKSAEVIFDRMAEK-NVIS-WNSIIAAYVQNGKNYSALEL 418
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI G+T GL +A+ + V + T ++ + + S+ ++H I+
Sbjct: 101 MIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLG 160
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+VY +L+ Y K G AE VF MPE++ V++ +M+ Y G G +L L+
Sbjct: 161 FVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFK 220
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEI 153
ML+ G KPD + ++ L ACS+ G EI
Sbjct: 221 EMLKCGFKPDRFSTMSALGACSHVYSPKMGKEI 253
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 201 bits (512), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 104/326 (31%), Positives = 195/326 (59%), Gaps = 6/326 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+++GY+ N +E A+ L + ++PN T +S L +CS+ G++ + ++HG +++
Sbjct: 297 LLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLG 356
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ + + G +LV YS SG ++ A +VF ++ +K+ V++ ++++ QHG G+ A ++
Sbjct: 357 LETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFG 416
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK-IHKIKPSTEHYCCVADMLGR 179
M+R +PD + F +LSACS+ G +++G ++F M I+ I +HY C+ D+LGR
Sbjct: 417 QMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGR 476
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G++ EA E ++++ N M +W ++L AC+ H + G+ A + +++++ A +
Sbjct: 477 CGKLKEAEELIERMVVKPNEM-VWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAA--Y 533
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
VLLSNIYA G W NV ++R ++ + G+ K+ G S V I G + F S D+ P IY
Sbjct: 534 VLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGDQ--PHCSRIY 591
Query: 300 DILDKLTMDIKDAGYKTRYNSSLNEI 325
+ L+ L +K+ GY Y S+L+++
Sbjct: 592 EKLEFLREKLKELGYAPDYRSALHDV 617
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 105/245 (42%), Gaps = 7/245 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI G QN + +A+ + L + + + ++ AC++ + Q+HG I+
Sbjct: 196 MICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLG 255
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
Y +L+ Y+ I + VF+ + +T ++ Y + AL+++
Sbjct: 256 FLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFS 315
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYC--CVADMLG 178
MLR+ I P+ F + L++CS G +D G E+ V K+ T+ + + M
Sbjct: 316 GMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAV---KLGLETDAFVGNSLVVMYS 372
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
G V +A ++ + V W SI+ C HG + V+ +++ + E +
Sbjct: 373 DSGNVNDAVSVFIKIFKKSIVS--WNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITF 430
Query: 239 HVLLS 243
LLS
Sbjct: 431 TGLLS 435
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 8/160 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+G + G A+ E V V+ ++++ C +G + A +L
Sbjct: 103 MISGCVECGDMNTAVKLFDEMPERSV----VSWTAMVNGCFRSGKVDQAERL----FYQM 154
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ A ++V Y + G + A +F +MP KN +++TTM+ Q+ AL L+
Sbjct: 155 PVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFK 214
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKI 160
+MLR IK + F +++AC+ A G+++ ++K+
Sbjct: 215 NMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLIIKL 254
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 92/225 (40%), Gaps = 31/225 (13%)
Query: 51 QLHGFSIRHFMDQNVYAGTA----------LVDTYSKSGAISYAENVFNRMPEKNSVTYT 100
+ FSI H + Y + L+ + S I A VFN++P + YT
Sbjct: 11 RFRAFSISHVIHGKCYRSFSVTVEFQNREVLICNHLLSRRIDEAREVFNQVPSPHVSLYT 70
Query: 101 TMMMSYGQHGMGRRALTLYDSMLRSGIKP--DAVAFVAILSACSYAGLVDEGLEIFESMV 158
M+ Y + AL L+D M P D V++ +++S C G ++ +++F+ M
Sbjct: 71 KMITGYTRSNRLVDALNLFDEM------PVRDVVSWNSMISGCVECGDMNTAVKLFDEMP 124
Query: 159 KIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFEL 218
+ S + + + R G+V +A Q+ W S++ HGY +
Sbjct: 125 -----ERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAA--WNSMV-----HGYLQF 172
Query: 219 GKV-VAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQI 262
GKV A KL K V + ++ + E E +D +N +
Sbjct: 173 GKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNML 217
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 201 bits (511), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 183/328 (55%), Gaps = 4/328 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK-VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+I+G Q L E+AI + V + VT+ SI AC G++ A ++ + ++
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ +V GT LVD +S+ G A ++FN + ++ +T + + G RA+ L+
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
D M+ G+KPD VAFV L+ACS+ GLV +G EIF SM+K+H + P HY C+ D+LGR
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G + EA + ++ + + N + IW S+L AC+ G E+ AEK+ + E+ G +
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDV-IWNSLLAACRVQGNVEMAAYAAEKIQVLAPER--TGSY 676
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
VLLSN+YA G W ++ +VR + EKGL K G S ++I G + F S DE HP+ I
Sbjct: 677 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIE 736
Query: 300 DILDKLTMDIKDAGYKTRYNSSLNEIVE 327
+LD+++ G+ ++ L ++ E
Sbjct: 737 AMLDEVSQRASHLGHVPDLSNVLMDVDE 764
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 12/170 (7%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GY +GL +AIL + + P+ T L AC+ + + Q+HG ++
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++++ +LV Y++ G + A VF+ M E+N V++T+M+ Y + + A+ L+
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 121 SMLRS-GIKPDAVAFVAILSACS-----------YAGLVDEGLEIFESMV 158
M+R + P++V V ++SAC+ YA + + G+E+ + MV
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV 274
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 115/248 (46%), Gaps = 12/248 (4%)
Query: 1 MIAGYTQNGLNEKAI-LTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
MI GY + + A+ L R +V PN+VT+ ++ AC+ + +++ F
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
++ N +ALVD Y K AI A+ +F+ N M +Y + G+ R AL ++
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYC-CVADMLG 178
+ M+ SG++PD ++ ++ +S+CS + G +++ S ++ C + DM
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLR--NGFESWDNICNALIDMYM 383
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKV-VAEKLLSMETEKRVAG 237
+ R A+ ++ V W SI+ GY E G+V A + EK +
Sbjct: 384 KCHRQDTAFRIFDRMSNKTVV--TWNSIVA-----GYVENGEVDAAWETFETMPEKNIVS 436
Query: 238 YHVLLSNI 245
++ ++S +
Sbjct: 437 WNTIISGL 444
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 104/314 (33%), Positives = 174/314 (55%), Gaps = 3/314 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GY Q GL ++ + + ++++P+ T +S+ ACS+ + + H I+
Sbjct: 180 MISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAVMIKRC 239
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ N+ +ALVD Y K + S VF+++ +N +T+T+++ YG HG L ++
Sbjct: 240 IKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFE 299
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M G +P+ V F+ +L+AC++ GLVD+G E F SM + + I+P +HY + D LGR
Sbjct: 300 KMKEEGCRPNPVTFLVVLTACNHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRA 359
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
GR+ EAYEFV + +WGS+LGAC+ HG +L ++ A K L ++ G +V
Sbjct: 360 GRLQEAYEFVMK-SPCKEHPPVWGSLLGACRIHGNVKLLELAATKFLELDPTN--GGNYV 416
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
+ +N YA G E +VR ++ G+ K+ G S +E+ G V+ F+ D H S +IY
Sbjct: 417 VFANGYASCGLREAASKVRRKMENAGVKKDPGYSQIELQGEVHRFMKDDTSHRLSEKIYK 476
Query: 301 ILDKLTMDIKDAGY 314
+ ++T D Y
Sbjct: 477 KVHEMTSFFMDIDY 490
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 15/189 (7%)
Query: 32 TLSSILPACSSTGSIAFATQLH------GFSIRHFMDQNVYAGTALVDTYSKSGAISYAE 85
T + +L C ++H GF++ N Y L+ Y+ SG + A
Sbjct: 110 TYAVLLQECKQRKEYTKGKRIHAQMFVVGFAL------NEYLKVKLLILYALSGDLQTAG 163
Query: 86 NVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAG 145
+F + ++ + + M+ Y Q G+ + L +Y M ++ I PD F ++ ACS
Sbjct: 164 ILFRSLKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALD 223
Query: 146 LVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGS 205
++ G M+K IK + + DM + + + QL NV+ W S
Sbjct: 224 RLEHGKRAHAVMIK-RCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTR-NVI-TWTS 280
Query: 206 ILGACKNHG 214
++ HG
Sbjct: 281 LISGYGYHG 289
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 201 bits (511), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 114/328 (34%), Positives = 183/328 (55%), Gaps = 4/328 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK-VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+I+G Q L E+AI + V + VT+ SI AC G++ A ++ + ++
Sbjct: 440 IISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKN 499
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ +V GT LVD +S+ G A ++FN + ++ +T + + G RA+ L+
Sbjct: 500 GIQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELF 559
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
D M+ G+KPD VAFV L+ACS+ GLV +G EIF SM+K+H + P HY C+ D+LGR
Sbjct: 560 DDMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGR 619
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G + EA + ++ + + N + IW S+L AC+ G E+ AEK+ + E+ G +
Sbjct: 620 AGLLEEAVQLIEDMPMEPNDV-IWNSLLAACRVQGNVEMAAYAAEKIQVLAPER--TGSY 676
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
VLLSN+YA G W ++ +VR + EKGL K G S ++I G + F S DE HP+ I
Sbjct: 677 VLLSNVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIE 736
Query: 300 DILDKLTMDIKDAGYKTRYNSSLNEIVE 327
+LD+++ G+ ++ L ++ E
Sbjct: 737 AMLDEVSQRASHLGHVPDLSNVLMDVDE 764
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 88/170 (51%), Gaps = 12/170 (7%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GY +GL +AIL + + P+ T L AC+ + + Q+HG ++
Sbjct: 105 LIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMG 164
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++++ +LV Y++ G + A VF+ M E+N V++T+M+ Y + + A+ L+
Sbjct: 165 YAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFF 224
Query: 121 SMLRS-GIKPDAVAFVAILSACS-----------YAGLVDEGLEIFESMV 158
M+R + P++V V ++SAC+ YA + + G+E+ + MV
Sbjct: 225 RMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMV 274
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/258 (23%), Positives = 115/258 (44%), Gaps = 32/258 (12%)
Query: 1 MIAGYTQNGLNEKAI-LTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
MI GY + + A+ L R +V PN+VT+ ++ AC+ + +++ F
Sbjct: 206 MICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNS 265
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
++ N +ALVD Y K AI A+ +F+ N M +Y + G+ R AL ++
Sbjct: 266 GIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVF 325
Query: 120 DSMLRSGIKPDAVAFVAILSACS-----------YAGLVDEGLEIFESMVKIHKIKPSTE 168
+ M+ SG++PD ++ ++ +S+CS + ++ G E ++++
Sbjct: 326 NLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNA-------- 377
Query: 169 HYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKV-VAEKLL 227
+ DM + R A+ ++ V W SI+ GY E G+V A +
Sbjct: 378 ----LIDMYMKCHRQDTAFRIFDRMSNKTVV--TWNSIVA-----GYVENGEVDAAWETF 426
Query: 228 SMETEKRVAGYHVLLSNI 245
EK + ++ ++S +
Sbjct: 427 ETMPEKNIVSWNTIISGL 444
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 200 bits (509), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 116/325 (35%), Positives = 185/325 (56%), Gaps = 4/325 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M+ GY Q G NE+A+ +EAL + N + SS++ C+++ + Q+HG SI+
Sbjct: 188 MMYGYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSS 247
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
D + + G++LV YSK G A VFN +P KN + M+ +Y QH ++ + L+
Sbjct: 248 FDSSSFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFK 307
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M SG+KP+ + F+ +L+ACS+AGLVDEG F+ M K +I+P+ +HY + DMLGR
Sbjct: 308 RMKLSGMKPNFITFLNVLNACSHAGLVDEGRYYFDQM-KESRIEPTDKHYASLVDMLGRA 366
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
GR+ EA E + + D +WG++L +C H EL A+K+ E +G H+
Sbjct: 367 GRLQEALEVITNMPIDP-TESVWGALLTSCTVHKNTELAAFAADKVF--ELGPVSSGMHI 423
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LSN YA +G +E+ + R + ++G KE G S VE V+ F + + +H +S EIY+
Sbjct: 424 SLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYE 483
Query: 301 ILDKLTMDIKDAGYKTRYNSSLNEI 325
L +L +++ AGY + L E+
Sbjct: 484 KLAELGEEMEKAGYIADTSYVLREV 508
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 79/149 (53%)
Query: 5 YTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQN 64
+ QN L ++ L++ + + P+ L S +C+ +H S++ D +
Sbjct: 91 FAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDAD 150
Query: 65 VYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLR 124
V+ G++LVD Y+K G I YA +F+ MP++N VT++ MM Y Q G AL L+ L
Sbjct: 151 VFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALF 210
Query: 125 SGIKPDAVAFVAILSACSYAGLVDEGLEI 153
+ + +F +++S C+ + L++ G +I
Sbjct: 211 ENLAVNDYSFSSVISVCANSTLLELGRQI 239
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 199 bits (507), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/315 (32%), Positives = 180/315 (57%), Gaps = 6/315 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI G+ + G E+A+L RE + V P+ V + + L AC++ G+++F +H + +
Sbjct: 177 MINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGLWVHRYVLSQD 236
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
NV +L+D Y + G + +A VF M ++ V++ ++++ + +G +L +
Sbjct: 237 FKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVGFAANGNAHESLVYFR 296
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M G KPDAV F L+ACS+ GLV+EGL F+ M ++I P EHY C+ D+ R
Sbjct: 297 KMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQIMKCDYRISPRIEHYGCLVDLYSRA 356
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY-- 238
GR+ +A + V+ + N + I GS+L AC NHG V+AE+L+ T+ V +
Sbjct: 357 GRLEDALKLVQSMPMKPNEVVI-GSLLAACSNHGN---NIVLAERLMKHLTDLNVKSHSN 412
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEI 298
+V+LSN+YA +G+WE ++R ++ GL K+ G S +EI ++ F++ D H ++ I
Sbjct: 413 YVILSNMYAADGKWEGASKMRRKMKGLGLKKQPGFSSIEIDDCMHVFMAGDNAHVETTYI 472
Query: 299 YDILDKLTMDIKDAG 313
++L+ ++ D++ G
Sbjct: 473 REVLELISSDLRLQG 487
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 100/222 (45%), Gaps = 39/222 (17%)
Query: 6 TQNGLNEKAILTLREALLHKVIPNAVTLSSILPACS--STGSIAFATQLHGFSIRHFMDQ 63
T+NG +A + L V PN +T ++L C ++GS A LHG++ + +D+
Sbjct: 47 TRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDR 106
Query: 64 N-VYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSM 122
N V GTA++ YSK G A VF+ M +KNSVT+ TM+ Y + G A ++D M
Sbjct: 107 NHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKM 166
Query: 123 LR-------------------------------SGIKPDAVAFVAILSACSYAGLVDEGL 151
SG+KPD VA +A L+AC+ G + GL
Sbjct: 167 PERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFGL 226
Query: 152 EIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQL 193
+ ++ K + + D+ R G V EF +Q+
Sbjct: 227 WVHRYVLS-QDFKNNVRVSNSLIDLYCRCGCV----EFARQV 263
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/312 (34%), Positives = 171/312 (54%), Gaps = 6/312 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSI-RH 59
+I+G+ QNGL KA + E P+ VTL +L ACS GS+ +H + + RH
Sbjct: 289 LISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRH 348
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+D+ TAL+D YSK GA+S + +F + K+ V + TM+ YG HG G+ ++L+
Sbjct: 349 VLDR--VTATALMDMYSKCGALSSSREIFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLF 406
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M S I+PD F ++LSA S++GLV++G F M+ +KI+PS +HY C+ D+L R
Sbjct: 407 LKMTESNIEPDHATFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEKHYVCLIDLLAR 466
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
GRV EA + + D N + IW ++L C NH +G + A K+L + + G
Sbjct: 467 AGRVEEALDMINSEKLD-NALPIWVALLSGCINHRNLSVGDIAANKILQLNPDS--IGIQ 523
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
L+SN +A +W+ V +VR + + K G S +E+ G + F+ D H + +
Sbjct: 524 TLVSNFFATANKWKEVAKVRKLMRNGAMEKVPGYSAIEVNGELRTFLMEDLSHHEHYHML 583
Query: 300 DILDKLTMDIKD 311
+L L +I+D
Sbjct: 584 QVLRNLKTEIRD 595
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 125/276 (45%), Gaps = 19/276 (6%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M+ G+ Q G + KA+ RE + V + +L A G +HG+ R
Sbjct: 188 MVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTG 247
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ NV T+LVD Y+K G I A VF+RM K +V++ +++ + Q+G+ +A
Sbjct: 248 LPMNVVVETSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVV 307
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M G +PD V V +L ACS G + G + ++K H + T + DM +
Sbjct: 308 EMQSLGFQPDLVTLVGVLVACSQVGSLKTGRLVHCYILKRHVLDRVTA--TALMDMYSKC 365
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + + E + +G V W +++ HG G+ V L M TE + H
Sbjct: 366 GALSSSREIFEHVGRKDLV--CWNTMISCYGIHGN---GQEVVSLFLKM-TESNIEPDHA 419
Query: 241 LLSNIYA--------EEGE-WENV--DRVRNQITEK 265
+++ + E+G+ W +V ++ + Q +EK
Sbjct: 420 TFASLLSALSHSGLVEQGQHWFSVMINKYKIQPSEK 455
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 50 TQLHGFSIRHFMDQNVYAGTA----LVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMS 105
TQ+H F I N+ G++ L+ + + G ISYA VF+ +P++ Y +M++
Sbjct: 34 TQIHAFVIS---TGNLLNGSSISRDLIASCGRIGEISYARKVFDELPQRGVSVYNSMIVV 90
Query: 106 YGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDE 149
Y + L LYD M+ I+PD+ F + AC +GLV E
Sbjct: 91 YSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKAC-LSGLVLE 133
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 70/141 (49%), Gaps = 2/141 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALL-HKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
MI Y++ G N +L L + ++ K+ P++ T + + AC S + + ++
Sbjct: 87 MIVVYSR-GKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDF 145
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+V+ +++++ Y K G + AE +F +M +++ + +TTM+ + Q G +A+ Y
Sbjct: 146 GYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQAGKSLKAVEFY 205
Query: 120 DSMLRSGIKPDAVAFVAILSA 140
M G D V + +L A
Sbjct: 206 REMQNEGFGRDRVVMLGLLQA 226
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 198 bits (504), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 115/334 (34%), Positives = 185/334 (55%), Gaps = 15/334 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLH-KVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
MI GY +N NE+A+ + L V PN T SIL ACS + Q+H +
Sbjct: 301 MITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKS 360
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNR--MPEKNSVTYTTMMMSYGQHGMGRRALT 117
+N +AL++ YSKSG + A +F+ + +++ +++ +M+ Y HG G+ A+
Sbjct: 361 VHQKNEIVTSALLNMYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIE 420
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADML 177
+Y+ M + G KP AV ++ +L ACS+AGLV++G+E F+ +V+ + EHY C+ D+
Sbjct: 421 MYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLC 480
Query: 178 GRVGRVVEAYEFVKQLGEDGNV-MEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVA 236
GR GR+ + F+ +D + +G+IL AC H + K V +K+L ET A
Sbjct: 481 GRAGRLKDVTNFIN--CDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVL--ETGSDDA 536
Query: 237 GYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSG 296
G +VL+SNIYA G+ E +R ++ EKGL K+ GCS V++G + FV D+ HPQ
Sbjct: 537 GTYVLMSNIYAANGKREEAAEMRMKMKEKGLKKQPGCSWVKVGKQNHLFVVGDKSHPQ-- 594
Query: 297 EIYDILDKLTMDIKDAGYKTRYNSSLNEIVETVE 330
++ LD + D+++ K R N ++ E E
Sbjct: 595 --FEALDSILSDLRN---KMRKNKNVTSDAEEAE 623
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 90/181 (49%), Gaps = 15/181 (8%)
Query: 63 QNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSM 122
+NV TA+V Y +S +S AE +F MPE+N V++ TM+ Y Q G +AL L+D M
Sbjct: 107 KNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEM 166
Query: 123 LRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGR 182
I V++ +++ A G +DE + +FE M + + + + D L + G+
Sbjct: 167 PERNI----VSWNSMVKALVQRGRIDEAMNLFERMPRRDVVS-----WTAMVDGLAKNGK 217
Query: 183 VVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLL 242
V EA + E N++ I G +N+ E A++L + E+ A ++ ++
Sbjct: 218 VDEARRLFDCMPER-NIISWNAMITGYAQNNRIDE-----ADQLFQVMPERDFASWNTMI 271
Query: 243 S 243
+
Sbjct: 272 T 272
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 116/224 (51%), Gaps = 26/224 (11%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIP--NAVTLSSILPACSSTGSIAFATQLHGFSIR 58
M+ G +NG ++A L +P N ++ ++++ + I A QL F +
Sbjct: 208 MVDGLAKNGKVDEA------RRLFDCMPERNIISWNAMITGYAQNNRIDEADQL--FQV- 258
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+++ + ++ + ++ ++ A +F+RMPEKN +++TTM+ Y ++ AL +
Sbjct: 259 -MPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEALNV 317
Query: 119 YDSMLRSG-IKPDAVAFVAILSACS-YAGLVDEGLEIFESMVK-IHKIKPSTEHYCCVAD 175
+ MLR G +KP+ +V+ILSACS AGLV EG +I + + K +H+ + +
Sbjct: 318 FSKMLRDGSVKPNVGTYVSILSACSDLAGLV-EGQQIHQLISKSVHQKNEIVT--SALLN 374
Query: 176 MLGRVGRVVEAYEFVKQLGEDGNVME----IWGSILGACKNHGY 215
M + G ++ A +++ ++G V + W S++ +HG+
Sbjct: 375 MYSKSGELIAA----RKMFDNGLVCQRDLISWNSMIAVYAHHGH 414
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 81/161 (50%), Gaps = 19/161 (11%)
Query: 1 MIAGYTQNGLNEKAILTLREA--LLHKV--IPNAVTLSSILPACSSTGSIAFATQLHGFS 56
+I GY + G +REA L +V N VT ++++ + ++ A L
Sbjct: 83 VITGYIKLG-------DMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEML---- 131
Query: 57 IRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRAL 116
+ ++NV + ++D Y++SG I A +F+ MPE+N V++ +M+ + Q G A+
Sbjct: 132 FQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAM 191
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESM 157
L++ M R D V++ A++ + G VDE +F+ M
Sbjct: 192 NLFERMPRR----DVVSWTAMVDGLAKNGKVDEARRLFDCM 228
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 197 bits (501), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 179/314 (57%), Gaps = 3/314 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI GY + +A+ RE + PN +TL S+L +C+ GS+ +H ++ +H
Sbjct: 201 MITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHS 260
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ V TAL+D ++K G++ A ++F +M K++ ++ M+++Y HG +++ +++
Sbjct: 261 FCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFE 320
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M ++PD + F+ +L+ACS+ G V+EG + F MV I PS +HY + D+L R
Sbjct: 321 RMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRA 380
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + +AYEF+ +L M +W +L AC +H +L + V+E++ ++ G +V
Sbjct: 381 GNLEDAYEFIDKLPISPTPM-LWRILLAACSSHNNLDLAEKVSERIFELDDSH--GGDYV 437
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
+LSN+YA +WE VD +R + ++ K GCS +E+ +V+ F S D + +++
Sbjct: 438 ILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATTKLHR 497
Query: 301 ILDKLTMDIKDAGY 314
LD++ ++K +GY
Sbjct: 498 ALDEMVKELKLSGY 511
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 106/228 (46%), Gaps = 3/228 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M GY++ + E L ++P+ T S+L AC+ ++ QLH S++
Sbjct: 100 MARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLG 159
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+D NVY L++ Y++ + A VF+R+ E V Y M+ Y + AL+L+
Sbjct: 160 LDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPNEALSLFR 219
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M +KP+ + +++LS+C+ G +D G I K H + + DM +
Sbjct: 220 EMQGKYLKPNEITLLSVLSSCALLGSLDLGKWI-HKYAKKHSFCKYVKVNTALIDMFAKC 278
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLS 228
G + +A +++ + W +++ A NHG E ++ E++ S
Sbjct: 279 GSLDDAVSIFEKMRYKDT--QAWSAMIVAYANHGKAEKSMLMFERMRS 324
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 3/132 (2%)
Query: 24 HKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR-HFMDQNVYAGTALVDTYSKS-GAI 81
H I T + IL S S+ Q+ ++I+ H D + A T S + ++
Sbjct: 21 HSKIDTVNTQNPIL-LISKCNSLRELMQIQAYAIKSHIEDVSFVAKLINFCTESPTESSM 79
Query: 82 SYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSAC 141
SYA ++F M E + V + +M Y + +L+ +L GI PD F ++L AC
Sbjct: 80 SYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKAC 139
Query: 142 SYAGLVDEGLEI 153
+ A ++EG ++
Sbjct: 140 AVAKALEEGRQL 151
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 166/287 (57%), Gaps = 3/287 (1%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
PN T + +L AC+ + Q+HG+ R D +A ++LVD Y+K G I A++V
Sbjct: 317 PNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHV 376
Query: 88 FNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLV 147
+ P+ + V++T+++ Q+G AL +D +L+SG KPD V FV +LSAC++AGLV
Sbjct: 377 VDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLV 436
Query: 148 DEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSIL 207
++GLE F S+ + H++ +++HY C+ D+L R GR + + ++ + +W S+L
Sbjct: 437 EKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKF-LWASVL 495
Query: 208 GACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGL 267
G C +G +L + A++L +E E V +V ++NIYA G+WE ++R ++ E G+
Sbjct: 496 GGCSTYGNIDLAEEAAQELFKIEPENPVT--YVTMANIYAAAGKWEEEGKMRKRMQEIGV 553
Query: 268 HKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYDILDKLTMDIKDAGY 314
K G S EI + F++ D HP +I + L +L +K+ GY
Sbjct: 554 TKRPGSSWTEIKRKRHVFIAADTSHPMYNQIVEFLRELRKKMKEEGY 600
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 110/228 (48%), Gaps = 15/228 (6%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVI---PNAVTLSSILPACSSTGSIAFATQLHGFSI 57
M+ GY + E+A++ +L+ +V PN T+S + A ++ I ++HG +
Sbjct: 188 MVTGYVKKDQPEEALVLY--SLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIV 245
Query: 58 RHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
R +D + ++L+D Y K G I A N+F+++ EK+ V++T+M+ Y + R +
Sbjct: 246 RAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFS 305
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADML 177
L+ ++ S +P+ F +L+AC+ + G ++ M ++ P + + DM
Sbjct: 306 LFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTRV-GFDPYSFASSSLVDMY 364
Query: 178 GRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG-------YFEL 218
+ G + A V + V W S++G C +G YF+L
Sbjct: 365 TKCGNIESAKHVVDGCPKPDLVS--WTSLIGGCAQNGQPDEALKYFDL 410
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 114/334 (34%), Positives = 180/334 (53%), Gaps = 7/334 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IAGY +G +E+A+ L + V + TLS ++ + + Q H IR+
Sbjct: 296 VIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNG 355
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + A TALVD YSK G + A VF+++P KN +++ +M Y HG G A+ L++
Sbjct: 356 FESEIVANTALVDFYSKWGRVDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFE 415
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+ + + P+ V F+A+LSAC+Y+GL ++G EIF SM ++H IKP HY C+ ++LGR
Sbjct: 416 KMIAANVAPNHVTFLAVLSACAYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRD 475
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + EA F+++ V +W ++L AC+ ELG+VVAEKL M EK G +V
Sbjct: 476 GLLDEAIAFIRRAPLKTTV-NMWAALLNACRMQENLELGRVVAEKLYGMGPEK--LGNYV 532
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDE----KHPQSG 296
++ N+Y G+ V + KGL C+ VE+G + F+S D
Sbjct: 533 VMYNMYNSMGKTAEAAGVLETLESKGLSMMPACTWVEVGDQTHSFLSGDRFDSYNETVKR 592
Query: 297 EIYDILDKLTMDIKDAGYKTRYNSSLNEIVETVE 330
+IY +D+L +I + GY L ++ E E
Sbjct: 593 QIYQKVDELMEEISEYGYSEEEQHLLPDVDEKEE 626
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 82/194 (42%), Gaps = 25/194 (12%)
Query: 32 TLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRM 91
T + +L A + GSI QLH +++ + N + L+D YSK G I A F M
Sbjct: 226 TFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNTFVSCGLIDMYSKCGDIEDARCAFECM 285
Query: 92 PEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAI-----------LSA 140
PEK +V + ++ Y HG AL L M SG+ D + L+
Sbjct: 286 PEKTTVAWNNVIAGYALHGYSEEALCLLYDMRDSGVSIDQFTLSIMIRISTKLAKLELTK 345
Query: 141 CSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVM 200
++A L+ G E +I +T + D + GRV A +L N++
Sbjct: 346 QAHASLIRNGFE--------SEIVANT----ALVDFYSKWGRVDTARYVFDKLPRK-NII 392
Query: 201 EIWGSILGACKNHG 214
W +++G NHG
Sbjct: 393 S-WNALMGGYANHG 405
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 81/186 (43%), Gaps = 3/186 (1%)
Query: 32 TLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRM 91
T +++ AC SI +++GF + + + Y ++ + K G I A +F+ +
Sbjct: 125 TYDALVEACIRLKSIRCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEI 184
Query: 92 PEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGL 151
PE+N +Y +++ + G A L+ M + F +L A + G + G
Sbjct: 185 PERNLYSYYSIISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGK 244
Query: 152 EIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACK 211
++ +K+ + +T C + DM + G + +A + + E V W +++
Sbjct: 245 QLHVCALKLGVVD-NTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVA--WNNVIAGYA 301
Query: 212 NHGYFE 217
HGY E
Sbjct: 302 LHGYSE 307
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/323 (34%), Positives = 184/323 (56%), Gaps = 10/323 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK-----VIPNAVTLSSILPACSSTGSIAFATQLHGF 55
+I GY G ++A+ RE L K V PN T+S++L AC G++ +H +
Sbjct: 165 LINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAY 224
Query: 56 SIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSV-TYTTMMMSYGQHGMGRR 114
++ ++ ++ GTAL+D Y+K G++ A+ VFN + K V Y+ M+ +G+
Sbjct: 225 IDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDE 284
Query: 115 ALTLYDSMLRS-GIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCV 173
L+ M S I P++V FV IL AC + GL++EG F+ M++ I PS +HY C+
Sbjct: 285 CFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCM 344
Query: 174 ADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEK 233
D+ GR G + EA F+ + + +V+ IWGS+L + G + + ++L+ ++
Sbjct: 345 VDLYGRSGLIKEAESFIASMPMEPDVL-IWGSLLSGSRMLGDIKTCEGALKRLIELDPMN 403
Query: 234 RVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHP 293
+G +VLLSN+YA+ G W V +R+++ KG++K GCS VE+ G+V+ FV DE
Sbjct: 404 --SGAYVLLSNVYAKTGRWMEVKCIRHEMEVKGINKVPGCSYVEVEGVVHEFVVGDESQQ 461
Query: 294 QSGEIYDILDKLTMDIKDAGYKT 316
+S IY +LD++ +++AGY T
Sbjct: 462 ESERIYAMLDEIMQRLREAGYVT 484
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 10/185 (5%)
Query: 20 EALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSG 79
+ LL + + +S+L SS G + A ++ S +++ A ++V+ Y+K+G
Sbjct: 87 QILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDS----GSKDLPAWNSVVNAYAKAG 142
Query: 80 AISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSML-----RSGIKPDAVAF 134
I A +F+ MPE+N ++++ ++ Y G + AL L+ M + ++P+
Sbjct: 143 LIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTM 202
Query: 135 VAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLG 194
+LSAC G +++G + + K H ++ + DM + G + A LG
Sbjct: 203 STVLSACGRLGALEQGKWVHAYIDKYH-VEIDIVLGTALIDMYAKCGSLERAKRVFNALG 261
Query: 195 EDGNV 199
+V
Sbjct: 262 SKKDV 266
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/290 (32%), Positives = 168/290 (57%), Gaps = 3/290 (1%)
Query: 22 LLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAI 81
L+ + P+ +T+ ++L C S+ +Q+H +S++ + + L+D Y+K G++
Sbjct: 465 LVSECEPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSL 524
Query: 82 SYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSAC 141
A +F+ M ++ V+++T+++ Y Q G G AL L+ M +GI+P+ V FV +L+AC
Sbjct: 525 GQARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTAC 584
Query: 142 SYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVME 201
S+ GLV+EGL+++ +M H I P+ EH CV D+L R GR+ EA F+ ++ + +V+
Sbjct: 585 SHVGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVV- 643
Query: 202 IWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQ 261
+W ++L ACK G L + AE +L ++ A HVLL +++A G WEN +R+
Sbjct: 644 VWKTLLSACKTQGNVHLAQKAAENILKIDPFNSTA--HVLLCSMHASSGNWENAALLRSS 701
Query: 262 ITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYDILDKLTMDIKD 311
+ + + K G S +EI ++ F + D HP+ +IY +L + + D
Sbjct: 702 MKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQMLD 751
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 106/223 (47%), Gaps = 21/223 (9%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVI-PNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+IAG++Q G +A+ L+E L V PN S L ACSS + +Q+HG I+
Sbjct: 240 IIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKS 299
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ N AG +L D Y++ G ++ A VF+++ ++ ++ ++ +G A++++
Sbjct: 300 ELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVF 359
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M SG PDA++ ++L A + + +G++I ++K + +AD L
Sbjct: 360 SQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIK----------WGFLAD-LTV 408
Query: 180 VGRVVEAYEFVKQLGEDGNVME---------IWGSILGACKNH 213
++ Y F L N+ E W +IL AC H
Sbjct: 409 CNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQH 451
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 111/239 (46%), Gaps = 11/239 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GY+QNG +AI + L ++P+ SI+ AC+S+ + QLH I+
Sbjct: 139 VITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGKQLHAQVIKLE 198
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ A AL+ Y + +S A VF +P K+ +++++++ + Q G AL+
Sbjct: 199 SSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLGFEFEALSHLK 258
Query: 121 SMLRSGI-KPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
ML G+ P+ F + L ACS D G +I +K ++ + C + DM R
Sbjct: 259 EMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIK-SELAGNAIAGCSLCDMYAR 317
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
G + A Q+ W I+ N+GY A++ +S+ ++ R +G+
Sbjct: 318 CGFLNSARRVFDQIERPDTAS--WNVIIAGLANNGY-------ADEAVSVFSQMRSSGF 367
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
Query: 32 TLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTAL----VDTYSKSGAISYAENV 87
T S++ ACSS+ S+A ++H H ++ N T L + Y K G++ A V
Sbjct: 69 TYISLICACSSSRSLAQGRKIHD----HILNSNCKYDTILNNHILSMYGKCGSLRDAREV 124
Query: 88 FNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLV 147
F+ MPE+N V+YT+++ Y Q+G G A+ LY ML+ + PD AF +I+ AC+ + V
Sbjct: 125 FDFMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDV 184
Query: 148 DEGLEIFESMVKI 160
G ++ ++K+
Sbjct: 185 GLGKQLHAQVIKL 197
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 67/142 (47%), Gaps = 1/142 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IAG NG ++A+ + IP+A++L S+L A + +++ Q+H + I+
Sbjct: 342 IIAGLANNGYADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWG 401
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK-NSVTYTTMMMSYGQHGMGRRALTLY 119
++ +L+ Y+ + N+F +SV++ T++ + QH L L+
Sbjct: 402 FLADLTVCNSLLTMYTFCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLF 461
Query: 120 DSMLRSGIKPDAVAFVAILSAC 141
ML S +PD + +L C
Sbjct: 462 KLMLVSECEPDHITMGNLLRGC 483
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 79/167 (47%), Gaps = 6/167 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHG-FSIRH 59
+I GY Q+G E+A++ +E + PN VT +L ACS G + +L+ H
Sbjct: 545 LIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSHVGLVEEGLKLYATMQTEH 604
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMP-EKNSVTYTTMMMSYGQHGMGRRALTL 118
+ + +VD +++G ++ AE + M E + V + T++ + G A
Sbjct: 605 GISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWKTLLSACKTQGNVHLAQKA 664
Query: 119 YDSMLRSGIKP-DAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIK 164
+++L+ I P ++ A V + S + +G E + S +K H +K
Sbjct: 665 AENILK--IDPFNSTAHVLLCSMHASSGNW-ENAALLRSSMKKHDVK 708
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/250 (37%), Positives = 153/250 (61%), Gaps = 3/250 (1%)
Query: 25 KVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYA 84
+V PN ++L +++ +C++ G H + +++ + N + GT+L+D YSK G +S+A
Sbjct: 211 QVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFA 270
Query: 85 ENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYA 144
VF+ M +++ Y M+ HG G+ + LY S++ G+ PD+ FV +SACS++
Sbjct: 271 RKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGLVPDSATFVVTISACSHS 330
Query: 145 GLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWG 204
GLVDEGL+IF SM ++ I+P EHY C+ D+LGR GR+ EA E +K++ N +W
Sbjct: 331 GLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPVKPNAT-LWR 389
Query: 205 SILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITE 264
S LG+ + HG FE G++ + LL +E E +G +VLLSNIYA W +V++ R + +
Sbjct: 390 SFLGSSQTHGDFERGEIALKHLLGLEFEN--SGNYVLLSNIYAGVNRWTDVEKTRELMKD 447
Query: 265 KGLHKEMGCS 274
++K G S
Sbjct: 448 HRVNKSPGIS 457
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 196 bits (497), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 176/311 (56%), Gaps = 3/311 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKV-IPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+I+G+ Q+G +A E +V I + + LSSI+ AC++ + Q+HG I
Sbjct: 208 LISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIAL 267
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
D V+ AL+D Y+K + A+++F+RM ++ V++T++++ QHG +AL LY
Sbjct: 268 GFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALY 327
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
D M+ G+KP+ V FV ++ ACS+ G V++G E+F+SM K + I+PS +HY C+ D+LGR
Sbjct: 328 DDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGR 387
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G + EA + + + W ++L ACK G ++G +A+ L+S K + Y
Sbjct: 388 SGLLDEAENLIHTMPFPPD-EPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTY- 445
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
+LLSNIYA W V R ++ E + K+ G S VE+ F + + HP +I+
Sbjct: 446 ILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIF 505
Query: 300 DILDKLTMDIK 310
+L KL +++
Sbjct: 506 RLLKKLEEEMR 516
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 37 LPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNS 96
L C+ ++ A LH ++ + Q LV+ Y K GA S+A VF+ MP ++
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 97 VTYTTMMMSYGQHGM-GRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEI 153
+ + +++ + Q + G+ SG++PD F A++ AC+ G +D G ++
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQV 127
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHG-FSIRHFMDQNVYAGTALVDTYSKSGAISYAEN 86
P+ S+++ AC++ GSI Q+H F + + + V ++LVD Y+K G ++ A+
Sbjct: 103 PDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEV-VKSSLVDMYAKCGLLNSAKA 161
Query: 87 VFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGL 146
VF+ + KN++++T M+ Y + G AL L+ + + ++ A++S +G
Sbjct: 162 VFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNL----YSWTALISGFVQSGK 217
Query: 147 VDEGLEIFESM 157
E +F M
Sbjct: 218 GLEAFSVFTEM 228
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 195 bits (496), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 110/319 (34%), Positives = 183/319 (57%), Gaps = 6/319 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M+ GY Q ++A+ R + P+ L S+L C+ TG++ +HG+ +
Sbjct: 250 MMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENR 309
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + GTALVD Y+K G I A VF + E+++ ++T+++ +GM RAL LY
Sbjct: 310 VTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYY 369
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M G++ DA+ FVA+L+AC++ G V EG +IF SM + H ++P +EH C+ D+L R
Sbjct: 370 EMENVGVRLDAITFVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRA 429
Query: 181 GRVVEAYEFVKQL-GE-DGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
G + EA E + ++ GE D ++ ++ S+L A +N+G ++ + VAEKL +E A
Sbjct: 430 GLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSA-- 487
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDE--KHPQSG 296
H LL+++YA WE+V VR ++ + G+ K GCS +EI G+ + F+ D+ HP+
Sbjct: 488 HTLLASVYASANRWEDVTNVRRKMKDLGIRKFPGCSSIEIDGVGHEFIVGDDLLSHPKMD 547
Query: 297 EIYDILDKLTMDIKDAGYK 315
EI +L + T + D +K
Sbjct: 548 EINSMLHQTTNLMLDLEHK 566
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 97/231 (41%), Gaps = 42/231 (18%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIP-NAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+I+ Y NG E AI + + + T+ S L ACS+ ++ +++ F +
Sbjct: 118 LISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTE 177
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRM---------------------------- 91
F + +V G ALVD + K G + A VF+ M
Sbjct: 178 F-EMSVRIGNALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLF 236
Query: 92 ---PEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVD 148
P K+ V +T MM Y Q AL L+ M +GI+PD V++L+ C+ G ++
Sbjct: 237 ERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALE 296
Query: 149 EGLEIF----ESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGE 195
+G I E+ V + K+ + + DM + G + A E ++ E
Sbjct: 297 QGKWIHGYINENRVTVDKVVGTA-----LVDMYAKCGCIETALEVFYEIKE 342
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 96/201 (47%), Gaps = 10/201 (4%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
P+ TL +L + + ++HG++++ ++ + Y +L+ Y+ G I V
Sbjct: 44 PDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKV 103
Query: 88 FNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLR-SGIKPDAVAFVAILSACSYAGL 146
F+ MP+++ V++ ++ SY +G A+ ++ M + S +K D V+ LSACS
Sbjct: 104 FDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKN 163
Query: 147 VDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSI 206
++ G I+ +V + + S + DM + G + +A + D NV + W S+
Sbjct: 164 LEIGERIYRFVVT--EFEMSVRIGNALVDMFCKCGCLDKARAVFDSM-RDKNV-KCWTSM 219
Query: 207 LGACKNHGYFELGKVVAEKLL 227
+ GY G++ ++L
Sbjct: 220 V-----FGYVSTGRIDEARVL 235
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 194 bits (493), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 109/313 (34%), Positives = 175/313 (55%), Gaps = 3/313 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G G + ++ R+ KV+ N+VT+ IL C+ ++ ++HG IR
Sbjct: 405 VIKGCNVQGRGDDSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTS 464
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
M +N+ ALV+ Y+K G +S VF + +K+ +++ +++ YG HG +AL+++D
Sbjct: 465 MSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFD 524
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+ SG PD +A VA+LSACS+AGLV++G EIF SM K ++P EHY C+ D+LGRV
Sbjct: 525 RMISSGFHPDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRV 584
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + EA E VK + + V + G++L +C+ H ++ + +A +L +E E+ G ++
Sbjct: 585 GFLKEASEIVKNMPMEPKVC-VLGALLNSCRMHKNVDIAEGIASQLSVLEPER--TGSYM 641
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LLSNIY+ G WE VR +K L K G S +E+ F S + IY
Sbjct: 642 LLSNIYSAGGRWEESANVRALAKKKDLKKVSGSSWIEVKKKKYKFSSGSIVQSEFETIYP 701
Query: 301 ILDKLTMDIKDAG 313
+L+ L + G
Sbjct: 702 VLEDLVSHMLKKG 714
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%)
Query: 8 NGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYA 67
+GL E A+ R + + L IL AC G H I+ + +N++
Sbjct: 136 HGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVIQIGLKENLHV 195
Query: 68 GTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGI 127
L+ Y K+G + A N+F MP +N +++ M+ + Q A+ +++ M R
Sbjct: 196 VNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCESAVKIFEWMQREEF 255
Query: 128 KPDAVAFVAILSACSYAGLVDEGLEIFESM 157
KPD V + ++LS S G ++ L+ F M
Sbjct: 256 KPDEVTWTSVLSCHSQCGKFEDVLKYFHLM 285
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 108/257 (42%), Gaps = 48/257 (18%)
Query: 23 LHKVIPNAVT---LSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSG 79
L ++ NAV+ L+ C+ +++ A ++HG+ I+ ++ + + AL+ Y K G
Sbjct: 284 LMRMSGNAVSGEALAVFFSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQG 343
Query: 80 AISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLR----SGIKPDAVAFV 135
+ AE++F ++ K ++ +++ S+ G AL+L+ + +K + V +
Sbjct: 344 KVKDAEHLFRQIRNKGIESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWT 403
Query: 136 AILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM--------LGR-------- 179
+++ C+ G D+ LE F M + K+ ++ CC+ + LGR
Sbjct: 404 SVIKGCNVQGRGDDSLEYFRQM-QFSKVLANSVTICCILSICAELPALNLGREIHGHVIR 462
Query: 180 ---------VGRVVEAYEFVKQLGEDGNVMEI--------WGSILGACKNHGYFELGKVV 222
+V Y L E V E W SI+ HG+
Sbjct: 463 TSMSENILVQNALVNMYAKCGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGF------- 515
Query: 223 AEKLLSMETEKRVAGYH 239
AEK LSM +G+H
Sbjct: 516 AEKALSMFDRMISSGFH 532
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 194 bits (492), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 98/278 (35%), Positives = 167/278 (60%), Gaps = 9/278 (3%)
Query: 1 MIAGYTQNGLNEK----AILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFS 56
M+ G++++G K ++++ A H PN T +S++ ACS S Q+H
Sbjct: 243 MVEGFSRSGETAKRSVDMYISMQRAGFH---PNISTFASVIGACSVLTSHEVGQQVHAQI 299
Query: 57 IRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRAL 116
++ + ++ G++L+D Y+K G I+ A VF++M EKN ++T+M+ YG++G AL
Sbjct: 300 MKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNGNPEEAL 359
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
L+ M I+P+ V F+ LSACS++GLVD+G EIFESM + + +KP EHY C+ D+
Sbjct: 360 ELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHYACIVDL 419
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVA 236
+GR G + +A+EF + + E + +IW ++L +C HG EL + A +L + +KR
Sbjct: 420 MGRAGDLNKAFEFARAMPERPDS-DIWAALLSSCNLHGNVELASIAASELFKLNADKR-P 477
Query: 237 GYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCS 274
G ++ LSN+YA +W+NV ++R + + + K +G S
Sbjct: 478 GAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRS 515
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 107/251 (42%), Gaps = 40/251 (15%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSI-----AFATQLHGF 55
MI+GY ++GL ++ +L ++ + TLS +L A +S GS + +H
Sbjct: 106 MISGYLKHGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHAR 165
Query: 56 SIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGM---- 111
I+ ++ + TALVDTY KSG + A VF M ++N V T+M+ Y G
Sbjct: 166 IIKCDVELDDVLITALVDTYVKSGKLESARTVFETMKDENVVCCTSMISGYMNQGFVEDA 225
Query: 112 ----------------------------GRRALTLYDSMLRSGIKPDAVAFVAILSACSY 143
+R++ +Y SM R+G P+ F +++ ACS
Sbjct: 226 EEIFNTTKVKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSV 285
Query: 144 AGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIW 203
+ G ++ ++K + + + DM + G + +A Q+ E NV W
Sbjct: 286 LTSHEVGQQVHAQIMK-SGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEK-NVFS-W 342
Query: 204 GSILGACKNHG 214
S++ +G
Sbjct: 343 TSMIDGYGKNG 353
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 181/324 (55%), Gaps = 17/324 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALL---HKVIPNAVTLSSILPACSSTGSIAFATQLHGFSI 57
M+AGY G + + L E + H + N VTL S+L AC+ +G++ +H +++
Sbjct: 214 MVAGYLGAGFTREVLELLAEMVFRCGHGL--NFVTLCSMLSACAQSGNLVVGRWVHVYAL 271
Query: 58 RHFMD-------QNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHG 110
+ M +V GTALVD Y+K G I + NVF M ++N VT+ + HG
Sbjct: 272 KKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGLAMHG 331
Query: 111 MGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHY 170
GR + ++ M+R +KPD + F A+LSACS++G+VDEG F S+ + + ++P +HY
Sbjct: 332 KGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGWRCFHSL-RFYGLEPKVDHY 389
Query: 171 CCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSME 230
C+ D+LGR G + EA ++++ N + + GS+LG+C HG E+ + + +L+ M
Sbjct: 390 ACMVDLLGRAGLIEEAEILMREMPVPPNEV-VLGSLLGSCSVHGKVEIAERIKRELIQMS 448
Query: 231 TEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDE 290
Y +L+SN+Y EG + D +R + ++G+ K G S + + V+ F S D
Sbjct: 449 PGN--TEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLSSIYVNDSVHRFSSGDR 506
Query: 291 KHPQSGEIYDILDKLTMDIKDAGY 314
HP++ EIY L+++ I+ AGY
Sbjct: 507 SHPRTKEIYLKLNEVIERIRSAGY 530
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 32/177 (18%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+++ +++ GL ++ E +V + V++ + C+ + FA Q HG +++
Sbjct: 82 LLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMG 141
Query: 61 MDQNVYAGTALVDTYSKSGAISYAEN-------------------------------VFN 89
+ +V AL+D Y K G +S + VF+
Sbjct: 142 VLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFH 201
Query: 90 RMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSML-RSGIKPDAVAFVAILSACSYAG 145
MPE+N+V +T M+ Y G R L L M+ R G + V ++LSAC+ +G
Sbjct: 202 EMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSG 258
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 11/147 (7%)
Query: 66 YAGTALVDTYSKSGAISYAENVFNRMP--EKNSVTYTTMMMSYGQHGMGRRALTLYDSML 123
Y AL Y+ SG + A+ +F+ +P EK++V +TT++ S+ ++G+ ++ L+ M
Sbjct: 44 YLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMR 103
Query: 124 RSGIKPDAVAFVAILSACSY---AGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
R ++ D V+ V + C+ G +G + M + +K + DM G+
Sbjct: 104 RKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVKVCNA----LMDMYGKC 159
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSIL 207
G V E ++L E V W +L
Sbjct: 160 GLVSEVKRIFEELEEKSVVS--WTVVL 184
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 193 bits (491), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/328 (31%), Positives = 179/328 (54%), Gaps = 7/328 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREAL-LHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
MI GY +N E+A+ L+ L + PN + +S L AC+ G + A +H I
Sbjct: 135 MIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDS 194
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
++ N +ALVD Y+K G I + VF + + + M+ + HG+ A+ ++
Sbjct: 195 GIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVF 254
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M + PD++ F+ +L+ CS+ GL++EG E F M + I+P EHY + D+LGR
Sbjct: 255 SEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGR 314
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
GRV EAYE ++ + + +V+ IW S+L + + + ELG++ + L K +G +
Sbjct: 315 AGRVKEAYELIESMPIEPDVV-IWRSLLSSSRTYKNPELGEIAIQNL-----SKAKSGDY 368
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
VLLSNIY+ +WE+ +VR ++++G+ K G S +E GG+++ F + D H ++ IY
Sbjct: 369 VLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHRFKAGDTSHIETKAIY 428
Query: 300 DILDKLTMDIKDAGYKTRYNSSLNEIVE 327
+L+ L K G+ + + L ++ E
Sbjct: 429 KVLEGLIQKTKSQGFVSDTDLVLMDVSE 456
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 193 bits (490), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/327 (33%), Positives = 176/327 (53%), Gaps = 3/327 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+G +NG E+A + L V+P+ T++++ A S ++ Q+H +++
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLN 648
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + GT+LVD Y+K G+I A +F R+ N + M++ QHG G+ L L+
Sbjct: 649 CTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFK 708
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M GIKPD V F+ +LSACS++GLV E + SM + IKP EHY C+AD LGR
Sbjct: 709 QMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRA 768
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G V +A ++ + + + ++ ++L AC+ G E GK VA KLL +E A +V
Sbjct: 769 GLVKQAENLIESMSMEASA-SMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSA--YV 825
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LLSN+YA +W+ + R + + K+ G S +E+ ++ FV D + Q+ IY
Sbjct: 826 LLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYR 885
Query: 301 ILDKLTMDIKDAGYKTRYNSSLNEIVE 327
+ + DIK GY + +L ++ E
Sbjct: 886 KVKDMIRDIKQEGYVPETDFTLVDVEE 912
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 104/216 (48%), Gaps = 7/216 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKV--IPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
M+AGYTQ+ K + AL+HK + TL+++ C +I Q+H ++I+
Sbjct: 488 MMAGYTQSHDGHKTLKLF--ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIK 545
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
D +++ + ++D Y K G +S A+ F+ +P + V +TTM+ ++G RA +
Sbjct: 546 SGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHV 605
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+ M G+ PD + A S +++G +I + +K++ V DM
Sbjct: 606 FSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCTNDPFVGTSLV-DMYA 664
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
+ G + +AY K++ E N+ W ++L HG
Sbjct: 665 KCGSIDDAYCLFKRI-EMMNITA-WNAMLVGLAQHG 698
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 2/160 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGS-IAFATQLHGFSIRH 59
+IAG QNGL +A+ + L + P+ T++S+L A SS ++ + Q+H +I+
Sbjct: 387 VIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKI 446
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ + TAL+D YS++ + AE +F R + V + MM Y Q G + L L+
Sbjct: 447 NNVSDSFVSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLF 505
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
M + G + D + C + +++G ++ +K
Sbjct: 506 ALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIK 545
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 29 NAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVF 88
+ VT +L S+A Q+H +++ +D + +L++ Y K +A VF
Sbjct: 314 DQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVF 373
Query: 89 NRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVD 148
+ M E++ +++ +++ Q+G+ A+ L+ +LR G+KPD ++L A A +
Sbjct: 374 DNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA---ASSLP 430
Query: 149 EGLEIFESMVKIHKIK 164
EGL + V +H IK
Sbjct: 431 EGLSL-SKQVHVHAIK 445
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 60/123 (48%)
Query: 12 EKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTAL 71
++A L R V + +TLS +L C +G + + HG++ + +D + + AL
Sbjct: 127 QQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEFVAGAL 186
Query: 72 VDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDA 131
V+ Y K G + + +F MP ++ V + M+ +Y + G A+ L + SG+ P+
Sbjct: 187 VNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNE 246
Query: 132 VAF 134
+
Sbjct: 247 ITL 249
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/315 (32%), Positives = 179/315 (56%), Gaps = 4/315 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI GY+QN +AI + + +IP+ VT+S+++ AC+ G + ++H +++++
Sbjct: 1003 MIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNG 1062
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+VY G+ALVD YSK G++ A VF +P+KN + +++ HG + AL ++
Sbjct: 1063 FVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHGFAQEALKMFA 1122
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M +KP+AV FV++ +AC++AGLVDEG I+ SM+ + I + EHY + + +
Sbjct: 1123 KMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGGMVHLFSKA 1182
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + EA E + + + N + IWG++L C+ H + ++ KL+ +E +GY+
Sbjct: 1183 GLIYEALELIGNMEFEPNAV-IWGALLDGCRIHKNLVIAEIAFNKLMVLEPMN--SGYYF 1239
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEM-GCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
LL ++YAE+ W +V +R ++ E G+ K G S + I + F + D+ H S E+
Sbjct: 1240 LLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVC 1299
Query: 300 DILDKLTMDIKDAGY 314
+LD++ + AGY
Sbjct: 1300 LLLDEIYDQMGLAGY 1314
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 56/92 (60%)
Query: 62 DQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDS 121
++N L++ Y G + AE++FN+MP K+ +++TTM+ Y Q+ R A+ ++
Sbjct: 963 EKNEATSNCLINGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYK 1022
Query: 122 MLRSGIKPDAVAFVAILSACSYAGLVDEGLEI 153
M+ GI PD V ++SAC++ G+++ G E+
Sbjct: 1023 MMEEGIIPDEVTMSTVISACAHLGVLEIGKEV 1054
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 192 bits (487), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/276 (37%), Positives = 158/276 (57%), Gaps = 3/276 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+GY+Q+GL + L R+ ++ ++ +SSIL A + + + Q+H + +
Sbjct: 623 LISGYSQHGLIQDGFLLFRDMVMSGFTMDSFAISSILKAAALSDESSLGAQVHAYITKIG 682
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ G++L+ YSK G+I F+++ + + +T ++ SY QHG AL +Y+
Sbjct: 683 LCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIASYAQHGKANEALQVYN 742
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M G KPD V FV +LSACS+ GLV+E SMVK + I+P HY C+ D LGR
Sbjct: 743 LMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIEPENRHYVCMVDALGRS 802
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
GR+ EA F+ + + + +WG++L ACK HG ELGKV A+K ++E E AG ++
Sbjct: 803 GRLREAESFINNMHIKPDAL-VWGTLLAACKIHGEVELGKVAAKK--AIELEPSDAGAYI 859
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLV 276
LSNI AE GEW+ V+ R + G+ KE G S V
Sbjct: 860 SLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWSSV 895
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 112/216 (51%), Gaps = 7/216 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+G+ + G +AI E L P+ TL+++L CSS S+ ++HG+++R
Sbjct: 522 MISGFNEYGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAG 581
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+D+ + G+ALV+ YSK G++ A V++R+PE + V+ ++++ Y QHG+ + L+
Sbjct: 582 IDKGMDLGSALVNMYSKCGSLKLARQVYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFR 641
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYC--CVADMLG 178
M+ SG D+ A +IL A A L DE + I KI TE + M
Sbjct: 642 DMVMSGFTMDSFAISSILKA---AALSDESSLGAQVHAYITKIGLCTEPSVGSSLLTMYS 698
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
+ G + + + Q+ +G + W +++ + HG
Sbjct: 699 KFGSIDDCCKAFSQI--NGPDLIAWTALIASYAQHG 732
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 1 MIAGYTQNGLNEKAILTL-REALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+IAG +N N A+ L E + P++ T SS+L AC+S + F + I+
Sbjct: 222 IIAGALRNQ-NYGAVFDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKC 280
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
++V+ TA+VD Y+K G ++ A VF+R+P + V++T M+ Y + AL ++
Sbjct: 281 -GAEDVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIF 339
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEI 153
M SG++ + +++SAC +V E ++
Sbjct: 340 KEMRHSGVEINNCTVTSVISACGRPSMVCEASQV 373
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI ++Q+ KAI L + + ++ S+L S + Q+HG++++
Sbjct: 424 MITSFSQSKKPGKAIRLFTRMLQEGLRTDEFSVCSLL---SVLDCLNLGKQVHGYTLKSG 480
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ ++ G++L YSK G++ + +F +P K++ + +M+ + ++G R A+ L+
Sbjct: 481 LVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFS 540
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEI 153
ML G PD A+L+ CS + G EI
Sbjct: 541 EMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEI 573
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 101/222 (45%), Gaps = 15/222 (6%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR-- 58
M++GYT++ A+ +E V N T++S++ AC + A+Q+H + +
Sbjct: 322 MLSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSG 381
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPE-KNSVTYTTMMMSYGQHGMGRRALT 117
++D +V A AL+ YSKSG I +E VF + + + M+ S+ Q +A+
Sbjct: 382 FYLDSSVAA--ALISMYSKSGDIDLSEQVFEDLDDIQRQNIVNVMITSFSQSKKPGKAIR 439
Query: 118 LYDSMLRSGIKPDAVAFVAILSA--CSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD 175
L+ ML+ G++ D + ++LS C G G + +V + S +
Sbjct: 440 LFTRMLQEGLRTDEFSVCSLLSVLDCLNLGKQVHGYTLKSGLVLDLTVGSS------LFT 493
Query: 176 MLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFE 217
+ + G + E+Y+ + + N W S++ +GY
Sbjct: 494 LYSKCGSLEESYKLFQGIPFKDNA--CWASMISGFNEYGYLR 533
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 78/163 (47%), Gaps = 12/163 (7%)
Query: 58 RHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
R+ + +V+ +L+ YS SG+++ A +F+ +P+ + V+ M+ Y QH + +L
Sbjct: 77 RYLLPFDVFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLR 136
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHY----CCV 173
+ M G + + +++ +++SACS +F +V H IK Y +
Sbjct: 137 FFSKMHFLGFEANEISYGSVISACSAL-----QAPLFSELVCCHTIKMGYFFYEVVESAL 191
Query: 174 ADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSIL-GACKNHGY 215
D+ + R +AY+ + NV W +I+ GA +N Y
Sbjct: 192 IDVFSKNLRFEDAYKVFRD-SLSANVY-CWNTIIAGALRNQNY 232
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 89/198 (44%), Gaps = 12/198 (6%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQL--HGFSIR 58
MI+GY Q+ L E+++ + N ++ S++ ACS+ + F+ + H +
Sbjct: 121 MISGYKQHRLFEESLRFFSKMHFLGFEANEISYGSVISACSALQAPLFSELVCCHTIKMG 180
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+F + V +AL+D +SK+ A VF N + T++ ++ L
Sbjct: 181 YFFYEVV--ESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDL 238
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEH-YCCVA--D 175
+ M KPD+ + ++L+AC+ E L F +V+ IK E + C A D
Sbjct: 239 FHEMCVGFQKPDSYTYSSVLAACASL----EKLR-FGKVVQARVIKCGAEDVFVCTAIVD 293
Query: 176 MLGRVGRVVEAYEFVKQL 193
+ + G + EA E ++
Sbjct: 294 LYAKCGHMAEAMEVFSRI 311
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 191 bits (485), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 178/313 (56%), Gaps = 7/313 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGF-SIRH 59
++ GY + GL + + +E L+ + P+ ++++ L AC+ G++A +H F +
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKR 248
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+++ +V+ GTALVD Y+K G I A VF ++ +N ++ ++ Y +G ++A T
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCL 308
Query: 120 DSMLR-SGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
D + R GIKPD+V + +L+AC++ G ++EG + E+M + I P EHY C+ D++
Sbjct: 309 DRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMC 368
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSME---TEKRV 235
R GR+ +A + ++++ + +WG++L C+ H ELG++ + LL +E E+
Sbjct: 369 RAGRLDDALDLIEKMPMK-PLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEEEE 427
Query: 236 AGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQS 295
A V LSNIY +VR I ++G+ K G SL+E+ G+V FVS D HP
Sbjct: 428 AAL-VQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLEVDGIVTKFVSGDVSHPNL 486
Query: 296 GEIYDILDKLTMD 308
+I+ ++ L++D
Sbjct: 487 LQIHTLIHLLSVD 499
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 90/192 (46%), Gaps = 5/192 (2%)
Query: 26 VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH--FMDQNVYAGTALVDTYSKSGAISY 83
+ P+ +T ++ AC + Q+H + +++ F+ + T ++ Y + +
Sbjct: 112 ITPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDG-HVQTGVLRIYVEDKLLFD 170
Query: 84 AENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSY 143
A VF+ +P+ + V + +M Y + G+G L ++ ML GI+PD + L+AC+
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQ 230
Query: 144 AGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIW 203
G + +G I E + K I+ + DM + G + A E ++L NV W
Sbjct: 231 VGALAQGKWIHEFVKKKRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRR-NVFS-W 288
Query: 204 GSILGACKNHGY 215
+++G +GY
Sbjct: 289 AALIGGYAAYGY 300
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 191 bits (484), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 108/315 (34%), Positives = 176/315 (55%), Gaps = 6/315 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVI-PNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
MI GY QN ++ I +E + P+ VT+ S+LPA S TG+++ H F R
Sbjct: 244 MIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRK 303
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+D+ V TA++D YSK G I A+ +F+ MPEK ++ M+ Y +G R AL L+
Sbjct: 304 KLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLF 363
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
+M+ KPD + +A+++AC++ GLV+EG + F M ++ + EHY C+ D+LGR
Sbjct: 364 VTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIEHYGCMVDLLGR 421
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G + EA + + + + N + I S L AC + E + + +K ++E E + G +
Sbjct: 422 AGSLKEAEDLITNMPFEPNGI-ILSSFLSACGQYKDIERAERILKK--AVELEPQNDGNY 478
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
VLL N+YA + W++ V+N + + KE+GCSL+EI +V+ F+S D HP I+
Sbjct: 479 VLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIH 538
Query: 300 DILDKLTMDIKDAGY 314
+L L M + + Y
Sbjct: 539 LVLGDLLMHMNEEKY 553
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 116/268 (43%), Gaps = 35/268 (13%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
P+ T +++ +CS + + QLH R ++Y T +VD Y+K G + A N
Sbjct: 76 PDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNA 135
Query: 88 FNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLV 147
F+ MP ++ V++T ++ Y + G A L+D M +K D V + A++ +G +
Sbjct: 136 FDEMPHRSEVSWTALISGYIRCGELDLASKLFDQM--PHVK-DVVIYNAMMDGFVKSGDM 192
Query: 148 DEGLEIFESMVKIHKIKPST--EHYCCVAD---------------------MLGRVGRVV 184
+F+ M I +T YC + D M+G +
Sbjct: 193 TSARRLFDEMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNK 252
Query: 185 EAYEFVKQLGE-------DGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAG 237
+ E ++ E D + + I S+L A + G LG+ + + +K+V
Sbjct: 253 QPQEGIRLFQEMQATTSLDPDDVTIL-SVLPAISDTGALSLGEWCHCFVQRKKLDKKVKV 311
Query: 238 YHVLLSNIYAEEGEWENVDRVRNQITEK 265
+L ++Y++ GE E R+ +++ EK
Sbjct: 312 CTAIL-DMYSKCGEIEKAKRIFDEMPEK 338
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 94/218 (43%), Gaps = 20/218 (9%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKV--IPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
+I+GY + G L L L ++ + + V ++++ +G + A +L
Sbjct: 150 LISGYIRCGE-----LDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRL----FD 200
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+ V T ++ Y I A +F+ MPE+N V++ TM+ Y Q+ + + L
Sbjct: 201 EMTHKTVITWTTMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQEGIRL 260
Query: 119 YDSM-LRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADML 177
+ M + + PD V +++L A S G + G E V+ K+ + + DM
Sbjct: 261 FQEMQATTSLDPDDVTILSVLPAISDTGALSLG-EWCHCFVQRKKLDKKVKVCTAILDMY 319
Query: 178 GRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGY 215
+ G + +A ++ E + W +++ HGY
Sbjct: 320 SKCGEIEKAKRIFDEMPE--KQVASWNAMI-----HGY 350
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 190 bits (483), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 171/313 (54%), Gaps = 5/313 (1%)
Query: 1 MIAGYTQNGLNEKAI--LTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
++ GY++ G +++ + L ++ KV P+ VT+ S++ ++ G ++ +HG IR
Sbjct: 337 LLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIR 396
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+ + + +AL+D Y K G I A VF EK+ +T+M+ HG G++AL L
Sbjct: 397 LQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQL 456
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+ M G+ P+ V +A+L+ACS++GLV+EGL +F M P TEHY + D+L
Sbjct: 457 FGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLC 516
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
R GRV EA + V++ +WGSIL AC+ E ++ +LL +E EK G
Sbjct: 517 RAGRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKE--GG 574
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMG-CSLVEIGGLVNYFVSRDEKHPQSGE 297
+VLLSNIYA G W D+ R + +G+ K G S+V + GL + + + HP+ E
Sbjct: 575 YVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGLHRFVAAEKQNHPRWTE 634
Query: 298 IYDILDKLTMDIK 310
I IL L ++K
Sbjct: 635 IKRILQHLYNEMK 647
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/249 (20%), Positives = 103/249 (41%), Gaps = 38/249 (15%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH- 59
MI GY + G + +A+ + + + P+ T+ S+L C I +HG+ R
Sbjct: 203 MIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRG 262
Query: 60 -FMDQNVYAGTALVDTYSKS-------------------------------GAISYAENV 87
N+ AL+D Y K G + A+ V
Sbjct: 263 PVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAV 322
Query: 88 FNRMPEKNSVTYTTMMMSYGQHGMGRRALT--LYDSMLRSGIKPDAVAFVAILSACSYAG 145
F++MP+++ V++ +++ Y + G +R + Y+ + +KPD V V+++S + G
Sbjct: 323 FDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNG 382
Query: 146 LVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGS 205
+ G + ++++ ++K + DM + G + A+ K E + +W S
Sbjct: 383 ELSHGRWVHGLVIRL-QLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKD--VALWTS 439
Query: 206 ILGACKNHG 214
++ HG
Sbjct: 440 MITGLAFHG 448
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 4/121 (3%)
Query: 24 HKVIPNAVTLSSILPACSSTGSIAFATQLHGFSI-RHFMDQNVYAGTALVDTYSKSGAIS 82
H+V P+ T ++ A S + Q+H I + Y +LV Y + G
Sbjct: 127 HRVSPDRQTFLYLMKASSFLSEVK---QIHCHIIVSGCLSLGNYLWNSLVKFYMELGNFG 183
Query: 83 YAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACS 142
AE VF RMP + ++ M++ Y + G AL LY M+ GI+PD +++L C
Sbjct: 184 VAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSDGIEPDEYTVLSLLVCCG 243
Query: 143 Y 143
+
Sbjct: 244 H 244
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 169/297 (56%), Gaps = 4/297 (1%)
Query: 32 TLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRM 91
TL++ILPACS ++ ++H ++ +V +L+D Y K G + Y+ VF+ M
Sbjct: 339 TLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVM 398
Query: 92 PEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGL 151
K+ ++ M+ Y +G + L++ M+ SG+ PD + FVA+LS CS GL + GL
Sbjct: 399 LTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGL 458
Query: 152 EIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACK 211
+FE M ++ P+ EHY C+ D+LGR G++ EA + ++ + + IWGS+L +C+
Sbjct: 459 SLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSA-SIWGSLLNSCR 517
Query: 212 NHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEM 271
HG +G++ A++L +E G +V++SNIYA+ W+NVD++R + ++G+ KE
Sbjct: 518 LHGNVSVGEIAAKELFVLEPHN--PGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEA 575
Query: 272 GCSLVEIGGLVNYFVS-RDEKHPQSGEIYDILDKLTMDIKDAGYKTRYNSSLNEIVE 327
GCS V++ + FV+ + S E + +L I+ +GY + L+++ E
Sbjct: 576 GCSWVQVKDKIQIFVAGGGYEFRNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDE 632
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 77/185 (41%), Gaps = 5/185 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M GY++NG A++ + L + P ++S L AC + +H ++
Sbjct: 207 MAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRK 266
Query: 61 --MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+DQ VY L+ Y +SG A VF+ M E+N VT+ +++ + L
Sbjct: 267 EKVDQVVY--NVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNL 324
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+ M I IL ACS + G EI ++K K KP + DM G
Sbjct: 325 FRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILK-SKEKPDVPLLNSLMDMYG 383
Query: 179 RVGRV 183
+ G V
Sbjct: 384 KCGEV 388
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/323 (33%), Positives = 181/323 (56%), Gaps = 5/323 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+G+ +NG + A+ RE V P+ T+ S+L AC+ G+ +H + +R+
Sbjct: 229 MISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYIVRNR 288
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ N TAL+D Y K G I NVF P+K + +M++ +G RA+ L+
Sbjct: 289 FELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERAMDLFS 348
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
+ RSG++PD+V+F+ +L+AC+++G V E F M + + I+PS +HY + ++LG
Sbjct: 349 ELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTLMVNVLGGA 408
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + EA +K + + + + IW S+L AC+ G E+ K A+ L ++ ++ GY V
Sbjct: 409 GLLEEAEALIKNMPVEEDTV-IWSSLLSACRKIGNVEMAKRAAKCLKKLDPDE-TCGY-V 465
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LLSN YA G +E R + E+ + KE+GCS +E+ V+ F+S HP+S EIY
Sbjct: 466 LLSNAYASYGLFEEAVEQRLLMKERQMEKEVGCSSIEVDFEVHEFISCGGTHPKSAEIYS 525
Query: 301 ILDKLTMDIK--DAGYKTRYNSS 321
+LD L D+ +G+ ++++
Sbjct: 526 LLDILNWDVSTIKSGFAELFDAT 548
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 112/250 (44%), Gaps = 36/250 (14%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK--VIPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
+I G++++ E AI + L V P +T S+ A G QLHG I+
Sbjct: 95 IIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIK 154
Query: 59 HFMDQN-------------------------------VYAGTALVDTYSKSGAISYAENV 87
++ + V A +++ ++K G I A+N+
Sbjct: 155 EGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNL 214
Query: 88 FNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLV 147
F+ MP++N V++ +M+ + ++G + AL ++ M +KPD V++L+AC+Y G
Sbjct: 215 FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGAS 274
Query: 148 DEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSIL 207
++G I E +V+ ++ + ++ + DM + G + E + + + W S++
Sbjct: 275 EQGRWIHEYIVR-NRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQ--LSCWNSMI 331
Query: 208 GACKNHGYFE 217
N+G+ E
Sbjct: 332 LGLANNGFEE 341
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 107/308 (34%), Positives = 169/308 (54%), Gaps = 7/308 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLH-KVIPNAVTLSSILPACSSTGSIAFATQLHGF-SIR 58
+I GY QNG + + + + + V+PN T++ +L AC+ G+ F +H +
Sbjct: 158 LIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETL 217
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+ +V AL+D Y K GAI A VF + ++ +++ TM+ HG G AL L
Sbjct: 218 GYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISWNTMINGLAAHGHGTEALNL 277
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+ M SGI PD V FV +L AC + GLV++GL F SM I P EH CV D+L
Sbjct: 278 FHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFTDFSIMPEIEHCGCVVDLLS 337
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
R G + +A EF+ ++ + + IW ++LGA K + ++G+V E+L+ +E R
Sbjct: 338 RAGFLTQAVEFINKMPVKADAV-IWATLLGASKVYKKVDIGEVALEELIKLEP--RNPAN 394
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEI-GGLVNYFVSRDEKHPQSGE 297
V+LSNIY + G +++ R++ + + G KE G S +E GLV ++ S EKHP++ E
Sbjct: 395 FVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIETDDGLVKFY-SSGEKHPRTEE 453
Query: 298 IYDILDKL 305
+ IL +L
Sbjct: 454 LQRILREL 461
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 58 RHFMDQ----NVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGR 113
R DQ +V + +++ Y+ G + E VF+ MPE+N ++ ++ Y Q+G
Sbjct: 110 RSLFDQMPCRDVMSWNTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVS 169
Query: 114 RALTLYDSMLRSG-IKPDAVAFVAILSACSYAGLVDEGLEI--FESMVKIHKIKPSTEHY 170
L + M+ G + P+ +LSAC+ G D G + + + +K+ + ++
Sbjct: 170 EVLGSFKRMVDEGSVVPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKN- 228
Query: 171 CCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGY 215
+ DM G+ G + A E K + + W +++ HG+
Sbjct: 229 -ALIDMYGKCGAIEIAMEVFKGIKRRDLIS--WNTMINGLAAHGH 270
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/325 (31%), Positives = 176/325 (54%), Gaps = 13/325 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI + G + A+ RE + P+ T+ S+L AC+ GS++ T H F +R
Sbjct: 223 MIDALVRFGEYDSALQLFRE-MQRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKC 281
Query: 61 ---MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
+ +V +L++ Y K G++ AE VF M +++ ++ M++ + HG A+
Sbjct: 282 DVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMN 341
Query: 118 LYDSML--RSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD 175
+D M+ R ++P++V FV +L AC++ G V++G + F+ MV+ + I+P+ EHY C+ D
Sbjct: 342 FFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVD 401
Query: 176 MLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGAC-KNHGYFELGKVVAEKLLSMETEKR 234
++ R G + EA + V + + + IW S+L AC K EL + +A ++ + +
Sbjct: 402 LIARAGYITEAIDMVMSMPMKPDAV-IWRSLLDACCKKGASVELSEEIARNIIGTKEDNE 460
Query: 235 -----VAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRD 289
+G +VLLS +YA W +V VR ++E G+ KE GCS +EI G+ + F + D
Sbjct: 461 SSNGNCSGAYVLLSRVYASASRWNDVGIVRKLMSEHGIRKEPGCSSIEINGISHEFFAGD 520
Query: 290 EKHPQSGEIYDILDKLTMDIKDAGY 314
HPQ+ +IY L + ++ GY
Sbjct: 521 TSHPQTKQIYQQLKVIDDRLRSIGY 545
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 12 EKAILTLREALLH-KVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTA 70
E+A + R+ L + P+ T +L AC+ + Q+H ++H +VY
Sbjct: 132 EEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNG 191
Query: 71 LVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPD 130
L+ Y G + A VF+ MPE++ V++ +M+ + + G AL L+ M RS +PD
Sbjct: 192 LIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLFREMQRS-FEPD 250
Query: 131 AVAFVAILSACSYAGLVDEG 150
++LSAC+ G + G
Sbjct: 251 GYTMQSVLSACAGLGSLSLG 270
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 162/282 (57%), Gaps = 7/282 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IAG QN L A+ + V PN TL+S+LPA ++ + A +H + +
Sbjct: 391 IIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQAMNIHCYLTKTG 450
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNS----VTYTTMMMSYGQHGMGRRAL 116
++ A T LV YSK G + A +FN + EK+ V + ++ YG HG G AL
Sbjct: 451 FMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGDGHNAL 510
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
++ M+RSG+ P+ + F + L+ACS++GLV+EGL +F M++ +K + HY C+ D+
Sbjct: 511 QVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFRFMLEHYKTLARSNHYTCIVDL 570
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVA 236
LGR GR+ EAY + + + +WG++L AC H +LG++ A KL +E E
Sbjct: 571 LGRAGRLDEAYNLITTIPFEPTS-TVWGALLAACVTHENVQLGEMAANKLFELEPEN--T 627
Query: 237 GYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEI 278
G +VLL+NIYA G W+++++VR+ + GL K+ G S +EI
Sbjct: 628 GNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEI 669
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GY +NG A++ + V + T+ S+LP C + +H
Sbjct: 189 MISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKR 248
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + ALV+ Y K G + A VF+RM ++ +T+T M+ Y + G AL L
Sbjct: 249 LGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCR 308
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEG 150
M G++P+AV +++S C A V++G
Sbjct: 309 LMQFEGVRPNAVTIASLVSVCGDALKVNDG 338
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 2/148 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI GYT++G E A+ R V PNAVT++S++ C + LHG+++R
Sbjct: 290 MINGYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQ 349
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ ++ T+L+ Y+K + VF+ + ++ ++ ++ Q+ + AL L+
Sbjct: 350 VYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFK 409
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVD 148
M R ++P+ ++L A YA L D
Sbjct: 410 RMRREDVEPNIATLNSLLPA--YAALAD 435
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 10/223 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLH--KVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
+I Y + GL AI + K +P+ T + A S+ +HG +R
Sbjct: 86 VIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILR 145
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+ ++ Y AL+ Y G + A +VF+ M ++ +++ TM+ Y ++G AL +
Sbjct: 146 SWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMM 205
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+D M+ + D V++L C + ++ G + + +V+ ++ E + +M
Sbjct: 206 FDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHK-LVEEKRLGDKIEVKNALVNMYL 264
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKV 221
+ GR+ EA FV E +V I C +GY E G V
Sbjct: 265 KCGRMDEA-RFVFDRMERRDV------ITWTCMINGYTEDGDV 300
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 174/310 (56%), Gaps = 13/310 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLH-KVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
MI+G G +++AI H + PNA+T+ S+L ACS + + + HG +IR
Sbjct: 400 MISGLAHAGRSDEAI----SIFCHMRDTPNAITVISLLNACSVSADLRTSKWAHGIAIRR 455
Query: 60 FMDQN-VYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+ N + GT++VD Y+K GAI A F+++ EKN +++T ++ +Y +G+ +AL L
Sbjct: 456 SLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIISAYAINGLPDKALAL 515
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+D M + G P+AV ++A LSAC++ GLV +GL IF+SMV+ KPS +HY C+ DML
Sbjct: 516 FDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSMVE-EDHKPSLQHYSCIVDMLS 574
Query: 179 RVGRVVEAYEFVKQLGEDGNV-MEIWGSILGACKNH--GYFELGKVVAEKLLSMETEKRV 235
R G + A E +K L ED WG+IL C+N +VVAE L E E
Sbjct: 575 RAGEIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIITSEVVAEVL---ELEPLC 631
Query: 236 AGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQS 295
+ ++L S+ +A E WE+V +R + E+ + G S+V G L F++ D+
Sbjct: 632 SSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVREGNLAKRFLAGDKLSQSD 691
Query: 296 GEIYDILDKL 305
E+ D++ L
Sbjct: 692 SELNDVVQSL 701
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 70/131 (53%), Gaps = 3/131 (2%)
Query: 16 LTLREALLH--KVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMD-QNVYAGTALV 72
L L + ++H K P+ VT++S+L AC+ I +HGFSIR D +V+ +L+
Sbjct: 210 LKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLI 269
Query: 73 DTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAV 132
D YSK + A VF+ +N V++ +++ + + AL ++ M++ ++ D V
Sbjct: 270 DMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEV 329
Query: 133 AFVAILSACSY 143
V++L C +
Sbjct: 330 TVVSLLRVCKF 340
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 107/243 (44%), Gaps = 22/243 (9%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++AG+ N ++A+ + V + VT+ S+L C +HG IR
Sbjct: 299 ILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRG 358
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ N A ++L+D Y+ + A V + M K+ V+ +TM+ G A++++
Sbjct: 359 YESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSDEAISIFC 418
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVD-----EGLEIFESMVKIHKIKPSTEHYCCVAD 175
M + P+A+ +++L+ACS + + G+ I S+ I+ I T + D
Sbjct: 419 HMRDT---PNAITVISLLNACSVSADLRTSKWAHGIAIRRSLA-INDISVGTS----IVD 470
Query: 176 MLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRV 235
+ G + A Q+ E N++ W I+ A +G + +K L++ E +
Sbjct: 471 AYAKCGAIEMARRTFDQITEK-NIIS-WTVIISAYAING-------LPDKALALFDEMKQ 521
Query: 236 AGY 238
GY
Sbjct: 522 KGY 524
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/313 (31%), Positives = 178/313 (56%), Gaps = 7/313 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGF-SIRH 59
++ GY + GL + + RE L+ + P+ ++++ L AC+ G++A +H F +
Sbjct: 189 LMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHEFVKKKS 248
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+++ +V+ GTALVD Y+K G I A VF ++ +N ++ ++ Y +G ++A+T
Sbjct: 249 WIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCL 308
Query: 120 DSMLR-SGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+ + R GIKPD+V + +L+AC++ G ++EG + E+M ++I P EHY C+ D++
Sbjct: 309 ERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMC 368
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSME---TEKRV 235
R GR+ +A ++++ + +WG++L C+ H ELG++ + LL +E E+
Sbjct: 369 RAGRLDDALNLIEKMPMKP-LASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEE 427
Query: 236 AGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQS 295
A V LSNIY +VR I ++G+ K G S++E+ G V FVS D HP
Sbjct: 428 AAL-VQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLEVDGNVTKFVSGDVSHPNL 486
Query: 296 GEIYDILDKLTMD 308
+I+ ++ L++D
Sbjct: 487 LQIHTVIHLLSVD 499
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 126/280 (45%), Gaps = 19/280 (6%)
Query: 26 VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH--FMDQNVYAGTALVDTYSKSGAISY 83
+ P+ +T ++ AC + Q+H + +++ F+ + + T ++ Y + +
Sbjct: 112 IAPSYLTFHFLIVACLKACFFSVGKQIHCWVVKNGVFLSDS-HVQTGVLRIYVEDKLLLD 170
Query: 84 AENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSY 143
A VF+ +P+ + V + +M Y + G+G L ++ ML G++PD + L+AC+
Sbjct: 171 ARKVFDEIPQPDVVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQ 230
Query: 144 AGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIW 203
G + +G I E + K I+ + DM + G + A E K+L NV W
Sbjct: 231 VGALAQGKWIHEFVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRR-NVFS-W 288
Query: 204 GSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYA--------EEGE--WE 253
+++G +GY + E+L E E + V+L + A EEG E
Sbjct: 289 AALIGGYAAYGYAKKAMTCLERL---EREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLE 345
Query: 254 NVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHP 293
N++ R +IT K H L+ G ++ ++ EK P
Sbjct: 346 NME-ARYEITPKHEHYSCIVDLMCRAGRLDDALNLIEKMP 384
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 186/327 (56%), Gaps = 3/327 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G++Q G E AI T E L + PN T++++L ACS +G++ ++HG+ + +
Sbjct: 264 LINGFSQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNG 323
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + GTALVD Y+K G + A VF+ M K+ +++T M+ + HG +A+ +
Sbjct: 324 IKLDRAIGTALVDMYAKCGELDCAATVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFR 383
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+ SG KPD V F+A+L+AC + VD GL F+SM + I+P+ +HY V D+LGR
Sbjct: 384 QMMYSGEKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRA 443
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G++ EA+E V+ + + + + W ++ ACK H + + V++ LL ++ E + G ++
Sbjct: 444 GKLNEAHELVENMPINPD-LTTWAALYRACKAHKGYRRAESVSQNLLELDPE--LCGSYI 500
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
L +A +G ++V++ R + ++ + +G S +E+ G +N F + D H + EI
Sbjct: 501 FLDKTHASKGNIQDVEKRRLSLQKRIKERSLGWSYIELDGQLNKFSAGDYSHKLTQEIGL 560
Query: 301 ILDKLTMDIKDAGYKTRYNSSLNEIVE 327
LD++ GY + S+++I E
Sbjct: 561 KLDEIISLAIQKGYNPGADWSIHDIEE 587
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 56/97 (57%)
Query: 57 IRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRAL 116
R ++N + + L+ Y SG ++ A+ +F MPEKN V++TT++ + Q G A+
Sbjct: 219 FRSMPERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAI 278
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEI 153
+ Y ML G+KP+ A+LSACS +G + G+ I
Sbjct: 279 STYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRI 315
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr3:2761195-2764281 REVERSE LENGTH=1028
Length = 1028
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 106/316 (33%), Positives = 181/316 (57%), Gaps = 12/316 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHG--FSIR 58
M++G++QNG E+A+ +E V+P+ T ++L CS S+ +H F +
Sbjct: 703 MMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLA 762
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK-NSVTYTTMMMSYGQHGMGRRALT 117
H +D+ L+D Y+K G + + VF+ M + N V++ +++ Y ++G AL
Sbjct: 763 HDLDE--LTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAEDALK 820
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADML 177
++DSM +S I PD + F+ +L+ACS+AG V +G +IFE M+ + I+ +H C+ D+L
Sbjct: 821 IFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLL 880
Query: 178 GRVGRVVEAYEFV--KQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRV 235
GR G + EA +F+ + L D +W S+LGAC+ HG G++ AEKL+ +E +
Sbjct: 881 GRWGYLQEADDFIEAQNLKPDA---RLWSSLLGACRIHGDDIRGEISAEKLIELEPQNSS 937
Query: 236 AGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQS 295
A +VLLSNIYA +G WE + +R + ++G+ K G S +++ + F + D+ H +
Sbjct: 938 A--YVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHSEI 995
Query: 296 GEIYDILDKLTMDIKD 311
G+I L+ L +KD
Sbjct: 996 GKIEMFLEDLYDLMKD 1011
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 7/220 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHG-FSIRH 59
+IAGY+QN L E+A++ +E L V P+ +T ++I+ AC S+ TQ HG + R
Sbjct: 601 LIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRG 659
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNS-VTYTTMMMSYGQHGMGRRALTL 118
F + Y G +L+ Y S ++ A +F+ + S V +T MM + Q+G AL
Sbjct: 660 FSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKF 719
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKI-HKIKPSTEHYCCVADML 177
Y M G+ PD FV +L CS + EG I + + H + T + + DM
Sbjct: 720 YKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSN--TLIDMY 777
Query: 178 GRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFE 217
+ G + + + ++ NV+ W S++ +GY E
Sbjct: 778 AKCGDMKGSSQVFDEMRRRSNVVS-WNSLINGYAKNGYAE 816
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 81/157 (51%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M++ Y+ G K + + +++ PN T S +L C+ ++ F Q+H I+
Sbjct: 131 MLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMG 190
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+++N Y G ALVD Y+K IS A VF + + N+V +T + Y + G+ A+ +++
Sbjct: 191 LERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFE 250
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESM 157
M G +PD +AFV +++ G + + +F M
Sbjct: 251 RMRDEGHRPDHLAFVTVINTYIRLGKLKDARLLFGEM 287
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 78/153 (50%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI GY NG + K + + + T +S+L C+++ + +Q H I+
Sbjct: 399 MIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKK 458
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ +N++ G ALVD Y+K GA+ A +F RM ++++VT+ T++ SY Q A L+
Sbjct: 459 LAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFK 518
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEI 153
M GI D + L AC++ + +G ++
Sbjct: 519 RMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 98/209 (46%), Gaps = 3/209 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+G+ + G AI V TL S+L A ++ +H +I+
Sbjct: 298 MISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG 357
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ N+Y G++LV YSK + A VF + EKN V + M+ Y +G + + L+
Sbjct: 358 LASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFM 417
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M SG D F ++LS C+ + ++ G + F S++ K+ + + DM +
Sbjct: 418 DMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNALVDMYAKC 476
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGA 209
G + +A + +++ + NV W +I+G+
Sbjct: 477 GALEDARQIFERMCDRDNV--TWNTIIGS 503
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 8/177 (4%)
Query: 52 LHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGM 111
+H S+ +D G A+VD Y+K +SYAE F+ + EK+ + +M+ Y G
Sbjct: 82 VHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAWNSMLSMYSSIGK 140
Query: 112 GRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYC 171
+ L + S+ + I P+ F +LS C+ V+ G +I SM+K+ + S YC
Sbjct: 141 PGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNS---YC 197
Query: 172 --CVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKL 226
+ DM + R+ +A + + + V W + G E +V E++
Sbjct: 198 GGALVDMYAKCDRISDARRVFEWIVDPNTV--CWTCLFSGYVKAGLPEEAVLVFERM 252
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 171/307 (55%), Gaps = 6/307 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK--VIPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
+I+GY Q E+A+ T + +L K I N+ T +SI ACS Q+H +I+
Sbjct: 357 IISGYCQMSQFEEAVKTFK-SLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIK 415
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+ + Y +AL+ YSK G + A VF M + V +T + + +G AL L
Sbjct: 416 RSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRL 475
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
++ M+ G+KP++V F+A+L+ACS+AGLV++G ++M++ + + P+ +HY C+ D+
Sbjct: 476 FEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYA 535
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
R G + EA +F+K + + + M W L C H ELG++ E+L ++ E AGY
Sbjct: 536 RSGLLDEALKFMKNMPFEPDAMS-WKCFLSGCWTHKNLELGEIAGEELRQLDPED-TAGY 593
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEI 298
VL N+Y G+WE + + E+ L KE+ CS ++ G ++ F+ D+ HPQ+ EI
Sbjct: 594 -VLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEI 652
Query: 299 YDILDKL 305
Y+ L +
Sbjct: 653 YEKLKEF 659
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 80/160 (50%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+ Y + G+ +KA+ L P + +++L + + ++ F Q+H IR
Sbjct: 155 MISAYAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAG 214
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ N T +V+ Y K G + A+ VF++M K V T +M+ Y Q G R AL L+
Sbjct: 215 LCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFV 274
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKI 160
++ G++ D+ F +L AC+ ++ G +I + K+
Sbjct: 275 DLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKL 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 108/290 (37%), Gaps = 47/290 (16%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++ GYTQ G A+ + + V ++ S +L AC+S + Q+H +
Sbjct: 256 LMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLG 315
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ V GT LVD Y K + A F + E N V+++ ++ Y Q A+ +
Sbjct: 316 LESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFK 375
Query: 121 SMLRSGIKP--DAVAFVAILSACSY----------------------------------- 143
S LRS ++ + +I ACS
Sbjct: 376 S-LRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSK 434
Query: 144 AGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQL---GEDGNVM 200
G +D+ E+FESM P + G EA +++ G N +
Sbjct: 435 CGCLDDANEVFESM-----DNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSV 489
Query: 201 EIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEG 250
+ ++L AC + G E GK + +L ++ + +IYA G
Sbjct: 490 -TFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSG 538
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 72/150 (48%), Gaps = 1/150 (0%)
Query: 10 LNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGT 69
LNE A L+E V ++ + + AC S++ LH + +V
Sbjct: 64 LNE-AFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQN 122
Query: 70 ALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKP 129
++ Y + ++ A+ +F+ M E N+V+ TTM+ +Y + G+ +A+ L+ ML SG KP
Sbjct: 123 CVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKP 182
Query: 130 DAVAFVAILSACSYAGLVDEGLEIFESMVK 159
+ + +L + +D G +I +++
Sbjct: 183 PSSMYTTLLKSLVNPRALDFGRQIHAHVIR 212
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/282 (34%), Positives = 160/282 (56%), Gaps = 8/282 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK---VIPNAVTLSSILPACSSTGSIAFATQLHGFSI 57
MI+G+ N L+ KA++ R +H+ + PN + +++L +CS S+ Q HG +
Sbjct: 489 MISGFRHNMLDTKALILFRR--MHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVV 546
Query: 58 RHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
+ + + TAL D Y K G I A F+ + KN+V + M+ YG +G G A+
Sbjct: 547 KSGYVSDSFVETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVG 606
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADML 177
LY M+ SG KPD + FV++L+ACS++GLV+ GLEI SM +IH I+P +HY C+ D L
Sbjct: 607 LYRKMISSGEKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCL 666
Query: 178 GRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAG 237
GR GR+ +A + + + + +W +L +C+ HG L + VAEKL+ ++ + A
Sbjct: 667 GRAGRLEDAEKLAEATPYKSSSV-LWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAA- 724
Query: 238 YHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIG 279
+VLLSN Y+ +W++ ++ + + +HK G S G
Sbjct: 725 -YVLLSNTYSSLRQWDDSAALQGLMNKNRVHKTPGQSWTTYG 765
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+ + G EKA++ + + +P+ TL+S+L ACS F + HG +++
Sbjct: 109 MISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTG 168
Query: 61 MDQNVYAGTALVDTYSKSGAI-SYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+D+N++ G AL+ Y+K G I Y VF + + N V+YT ++ + A+ ++
Sbjct: 169 LDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMF 228
Query: 120 DSMLRSGIKPDAVAFVAILS 139
M G++ D+V ILS
Sbjct: 229 RLMCEKGVQVDSVCLSNILS 248
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 103/222 (46%), Gaps = 10/222 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M++GY+ E+AI R+ + P+ TLS IL +C+ + Q+HG IR
Sbjct: 387 MLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGGKQIHGVVIRTE 446
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNR-MPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ +N + + L+ YS+ + +E +F+ + E + + +M+ + + + +AL L+
Sbjct: 447 ISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRHNMLDTKALILF 506
Query: 120 DSMLRSGI-KPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
M ++ + P+ +F +LS+CS + G + +VK + S + DM
Sbjct: 507 RRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSFVET-ALTDMYC 565
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGK 220
+ G + A +F + V IW ++ HGY G+
Sbjct: 566 KCGEIDSARQFFDAVLRKNTV--IWNEMI-----HGYGHNGR 600
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 97/215 (45%), Gaps = 16/215 (7%)
Query: 27 IPNAVTLSSILPACSSTGSI---AFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISY 83
+ N +++S+ C S I Q+H ++R +++ +L++ Y+K+ ++
Sbjct: 243 LSNILSISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNG 302
Query: 84 AENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSY 143
AE +F MPE N V++ M++ +GQ +++ M SG +P+ V +++L AC
Sbjct: 303 AELIFAEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFR 362
Query: 144 AGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQ-----LGEDGN 198
+G V+ G IF S+ +PS + + EA +Q L D
Sbjct: 363 SGDVETGRRIFSSIP-----QPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKT 417
Query: 199 VMEIWGSILGACKNHGYFELGKVVAEKLLSMETEK 233
+ + IL +C + E GK + ++ E K
Sbjct: 418 TLSV---ILSSCARLRFLEGGKQIHGVVIRTEISK 449
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 41/171 (23%)
Query: 63 QNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSM 122
++VY+ A + K G + A VF+ MPE++ V++ M+ + G +AL +Y M
Sbjct: 70 RDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRM 129
Query: 123 LRSGIKPDAVAFVAILSACS---------------------------------YAG---L 146
+ G P ++LSACS YA +
Sbjct: 130 VCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFI 189
Query: 147 VDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDG 197
VD G+ +FES+ +P+ Y V L R +V+EA + + + E G
Sbjct: 190 VDYGVRVFESLS-----QPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKG 235
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 186 bits (473), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/317 (32%), Positives = 179/317 (56%), Gaps = 14/317 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVI-----PNAVTLSSILPACSSTGSIAFATQLHGF 55
MI+GY + G ++A+ AL H +I P+ VTL S++ C GS+ +
Sbjct: 328 MISGYAEKGDMDEAL-----ALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGKWIDAR 382
Query: 56 S-IRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRR 114
+ I NV AL+D YSK G+I A ++F+ PEK VT+TTM+ Y +G+
Sbjct: 383 ADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTTMIAGYALNGIFLE 442
Query: 115 ALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVA 174
AL L+ M+ KP+ + F+A+L AC+++G +++G E F M +++ I P +HY C+
Sbjct: 443 ALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVYNISPGLDHYSCMV 502
Query: 175 DMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKR 234
D+LGR G++ EA E ++ + + IWG++L ACK H ++ + AE L ++E +
Sbjct: 503 DLLGRKGKLEEALELIRNMSAKPDA-GIWGALLNACKIHRNVKIAEQAAESLFNLEPQ-- 559
Query: 235 VAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQ 294
+A +V ++NIYA G W+ R+R+ + ++ + K G S++++ G + F + H +
Sbjct: 560 MAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPGESVIQVNGKNHSFTVGEHGHVE 619
Query: 295 SGEIYDILDKLTMDIKD 311
+ IY L+ L++ KD
Sbjct: 620 NEVIYFTLNGLSLFAKD 636
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 74/145 (51%), Gaps = 4/145 (2%)
Query: 13 KAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALV 72
+++L RE PN T + AC+ + +H I+ +V+ GTA V
Sbjct: 35 ESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATV 94
Query: 73 DTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAV 132
D + K ++ YA VF RMPE+++ T+ M+ + Q G +A +L+ M + I PD+V
Sbjct: 95 DMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSV 154
Query: 133 AFVAILSACSYAGLVDEGLEIFESM 157
+ ++ + S+ ++ L++ E+M
Sbjct: 155 TVMTLIQSASF----EKSLKLLEAM 175
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 76/152 (50%), Gaps = 2/152 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M++G+ Q+G +KA RE L+++ P++VT+ +++ + S S+ +H IR
Sbjct: 124 MLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLG 183
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMP--EKNSVTYTTMMMSYGQHGMGRRALTL 118
+D V + TY K G + A+ VF + ++ V++ +M +Y G A L
Sbjct: 184 VDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGL 243
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEG 150
Y MLR KPD F+ + ++C + +G
Sbjct: 244 YCLMLREEFKPDLSTFINLAASCQNPETLTQG 275
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
Query: 16 LTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTY 75
L LRE + P+ T ++ +C + ++ +H +I DQ++ A + Y
Sbjct: 246 LMLRE----EFKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMY 301
Query: 76 SKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFV 135
SKS A +F+ M + V++T M+ Y + G AL L+ +M++SG KPD V +
Sbjct: 302 SKSEDTCSARLLFDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLL 361
Query: 136 AILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYC-CVADMLGRVGRVVEAYEFVKQLG 194
+++S C G ++ G I ++ I+ K C + DM + G + EA +
Sbjct: 362 SLISGCGKFGSLETGKWI-DARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTP 420
Query: 195 EDGNVMEIWGSILGACKNHGYF 216
E V W +++ +G F
Sbjct: 421 EKTVV--TWTTMIAGYALNGIF 440
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 166/298 (55%), Gaps = 10/298 (3%)
Query: 11 NEKAILTLREALLHKVI-PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFM----DQNV 65
+ L L E +L I P+ VTL+++LP C S+ ++HG+ I + N
Sbjct: 343 DHDGTLALFERMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNE 402
Query: 66 YAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRS 125
+ +L+D Y K G + A VF+ M K+S ++ M+ YG G AL ++ M R+
Sbjct: 403 FIHNSLMDMYVKCGDLRDARMVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRA 462
Query: 126 GIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVE 185
G+KPD + FV +L ACS++G ++EG M ++ I P+++HY CV DMLGR ++ E
Sbjct: 463 GVKPDEITFVGLLQACSHSGFLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEE 522
Query: 186 AYEF-VKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSN 244
AYE + + D V +W SIL +C+ HG +L V ++L +E E G +VL+SN
Sbjct: 523 AYELAISKPICDNPV--VWRSILSSCRLHGNKDLALVAGKRLHELEPEH--CGGYVLMSN 578
Query: 245 IYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYDIL 302
+Y E G++E V VR+ + ++ + K GCS + + V+ F + ++ HP+ I+D L
Sbjct: 579 VYVEAGKYEEVLDVRDAMRQQNVKKTPGCSWIVLKNGVHTFFTGNQTHPEFKSIHDWL 636
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++ GY+Q E A+L + V + T++S+L A + +G I +HG +++
Sbjct: 233 LVNGYSQIFRFEDALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTG 292
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ AL+D Y KS + A ++F M E++ T+ +++ + G L L++
Sbjct: 293 SGSDIVVSNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFE 352
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMV 158
ML SGI+PD V +L C + +G EI M+
Sbjct: 353 RMLCSGIRPDIVTLTTVLPTCGRLASLRQGREIHGYMI 390
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 81/160 (50%), Gaps = 2/160 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+G+ NG A+ T RE + ++P+ T S+L S ++ ++HG + +
Sbjct: 132 LISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKG-SDAMELSDVKKVHGLAFKLG 190
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK-NSVTYTTMMMSYGQHGMGRRALTLY 119
D + Y G+ LV +YSK ++ A+ VF+ +P++ +SV + ++ Y Q AL ++
Sbjct: 191 FDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFEDALLVF 250
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
M G+ ++LSA + +G +D G I VK
Sbjct: 251 SKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVK 290
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 29 NAVTLSSILPACSSTGSIAFATQLHGFSIRH-FMDQNVYAGTALVDTYSKSGAISYAENV 87
N T + L C+ Q+HGF +R F+D + AGT+LV+ Y+K G + A V
Sbjct: 59 NVATCIATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLV 118
Query: 88 FNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLV 147
F E++ Y ++ + +G A+ Y M +GI PD F ++L L
Sbjct: 119 FGG-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELS 177
Query: 148 D 148
D
Sbjct: 178 D 178
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 180/327 (55%), Gaps = 6/327 (1%)
Query: 1 MIAGYTQNGLNEKAI-LTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+I GY Q G +A+ L R L+ I ++ LSSI+ + + Q+ +++
Sbjct: 284 LILGYAQEGEFVEAMGLFKRLQELNSQI-DSFALSSIIGVFADFALLRQGKQMQALAVKL 342
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
++VD Y K G + AE F M K+ +++T ++ YG+HG+G++++ ++
Sbjct: 343 PSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIF 402
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
MLR I+PD V ++A+LSACS++G++ EG E+F +++ H IKP EHY CV D+LGR
Sbjct: 403 YEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGR 462
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
GR+ EA + + NV IW ++L C+ HG ELGK V + LL ++ K A Y
Sbjct: 463 AGRLKEAKHLIDTMPIKPNV-GIWQTLLSLCRVHGDIELGKEVGKILLRIDA-KNPANY- 519
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
V++SN+Y + G W R KGL KE G S VEI V++F S ++ HP + I
Sbjct: 520 VMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQ 579
Query: 300 DILDKLTMDIKDA-GYKTRYNSSLNEI 325
+ L + +++ GY L++I
Sbjct: 580 ETLKEAERRLREELGYVYGLKHELHDI 606
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 105/219 (47%), Gaps = 5/219 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+++G+ NG + ++ E + PN T S+ L AC ++ Q+HGF ++
Sbjct: 78 LMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIG 137
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ V G +LVD YSK G I+ AE VF R+ +++ +++ M+ + G G +AL +
Sbjct: 138 FEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFG 197
Query: 121 SMLRSGIK--PDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYC-CVADML 177
M + IK PD ++L ACS G++ G +I +V+ PS+ + D+
Sbjct: 198 MMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLY 257
Query: 178 GRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYF 216
+ G + A + Q+ E M W S++ G F
Sbjct: 258 VKCGYLFSARKAFDQIKE--KTMISWSSLILGYAQEGEF 294
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 99/195 (50%), Gaps = 15/195 (7%)
Query: 1 MIAGYTQNGLNEKAILT---LREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSI 57
MIAG+ G KA+ T ++EA + K P+ TL+S+L ACSSTG I Q+HGF +
Sbjct: 179 MIAGFVHAGYGSKALDTFGMMQEANI-KERPDEFTLTSLLKACSSTGMIYAGKQIHGFLV 237
Query: 58 R---HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRR 114
R H G+ LVD Y K G + A F+++ EK ++++++++ Y Q G
Sbjct: 238 RSGFHCPSSATITGS-LVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVE 296
Query: 115 ALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPS---TEHYC 171
A+ L+ + + D+ A +I+ + L+ +G ++ VK+ PS T
Sbjct: 297 AMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKL----PSGLETSVLN 352
Query: 172 CVADMLGRVGRVVEA 186
V DM + G V EA
Sbjct: 353 SVVDMYLKCGLVDEA 367
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 20/199 (10%)
Query: 26 VIPNA-VTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYA 84
+IPN L SIL C+ G Q+H + ++ N+ L+D Y K A
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 85 ENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYA 144
VF+ MPE+N V+++ +M + +G + +L+L+ M R GI P+ F L AC
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 145 GLVDEGLEI--------FESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGED 196
+++GL+I FE MV++ + DM + GR+ EA + +++ +
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGN---------SLVDMYSKCGRINEAEKVFRRIVDR 171
Query: 197 GNVMEIWGSILGACKNHGY 215
+ W +++ + GY
Sbjct: 172 SLIS--WNAMIAGFVHAGY 188
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 185 bits (470), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 194/325 (59%), Gaps = 7/325 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IAG N +A++ LR+ + + PNA+TL++ L AC+ G++ ++H +R
Sbjct: 470 IIAGLRLNNRCFEALIFLRQMKM-TLQPNAITLTAALAACARIGALMCGKEIHAHVLRTG 528
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + + AL+D Y + G ++ A + FN +K+ ++ ++ Y + G G + L+D
Sbjct: 529 VGLDDFLPNALLDMYVRCGRMNTAWSQFNSQ-KKDVTSWNILLTGYSERGQGSMVVELFD 587
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M++S ++PD + F+++L CS + +V +GL F M + + + P+ +HY CV D+LGR
Sbjct: 588 RMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKM-EDYGVTPNLKHYACVVDLLGRA 646
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + EA++F++++ + +WG++L AC+ H +LG++ A+ + E +K+ GY++
Sbjct: 647 GELQEAHKFIQKMPVTPDP-AVWGALLNACRIHHKIDLGELSAQHIF--ELDKKSVGYYI 703
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LL N+YA+ G+W V +VR + E GL + GCS VE+ G V+ F+S D+ HPQ+ EI
Sbjct: 704 LLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINT 763
Query: 301 ILDKLTMDIKDAGY-KTRYNSSLNE 324
+L+ + + G K +SS++E
Sbjct: 764 VLEGFYEKMSEVGLTKISESSSMDE 788
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 84/163 (51%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GY +NG+ + + V P+ +TL+S++ AC G +H + I
Sbjct: 268 MISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTG 327
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ +L Y +G+ AE +F+RM K+ V++TTM+ Y + + +A+ Y
Sbjct: 328 FAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYR 387
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKI 163
M + +KPD + A+LSAC+ G +D G+E+ + +K I
Sbjct: 388 MMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKARLI 430
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 1/146 (0%)
Query: 1 MIAGYTQNG-LNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
++ GY + G +E L R + V P+ T +L C +A ++H +R+
Sbjct: 166 LVGGYAKQGYFDEAMCLYHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRY 225
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ ++ AL+ Y K G + A +F+RMP ++ +++ M+ Y ++GM L L+
Sbjct: 226 GYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELF 285
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAG 145
+M + PD + +++SAC G
Sbjct: 286 FAMRGLSVDPDLMTLTSVISACELLG 311
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 106/224 (47%), Gaps = 18/224 (8%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GY N L +KAI T R V P+ +T++++L AC++ G + +LH +I+
Sbjct: 369 MISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKAR 428
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ V L++ YSK I A ++F+ +P KN +++T+++ + AL
Sbjct: 429 LISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFLR 488
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEI----FESMVKIHKIKPSTEHYCCVADM 176
M + ++P+A+ A L+AC+ G + G EI + V + P+ + DM
Sbjct: 489 QM-KMTLQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNA-----LLDM 542
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGK 220
R GR+ A+ Q + W +L GY E G+
Sbjct: 543 YVRCGRMNTAWS---QFNSQKKDVTSWNILLT-----GYSERGQ 578
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 67/157 (42%), Gaps = 1/157 (0%)
Query: 4 GYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQ 63
G NG E+A+ L +V + +++ C + ++++ ++
Sbjct: 68 GLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSL 127
Query: 64 NVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSML 123
V G A + + + G + A VF +M E+N ++ ++ Y + G A+ LY ML
Sbjct: 128 GVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRML 187
Query: 124 R-SGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
G+KPD F +L C + G E+ +V+
Sbjct: 188 WVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVR 224
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 98/303 (32%), Positives = 165/303 (54%), Gaps = 3/303 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GY Q G E+ P L+S+L + I Q+H ++
Sbjct: 382 IIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFG 441
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++QN ++L++ YSK G+I A +F + V+ T M+ Y +HG + A+ L++
Sbjct: 442 LEQNSTVRSSLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFE 501
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
L+ G +PD+V F+++L+AC+++G +D G F M + + ++P+ EHY C+ D+L R
Sbjct: 502 KSLKVGFRPDSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRA 561
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
GR+ +A + + ++ + + +W ++L ACK G E G+ AE++L E + A V
Sbjct: 562 GRLSDAEKMINEMSWKKDDV-VWTTLLIACKAKGDIERGRRAAERIL--ELDPTCATALV 618
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
L+NIY+ G E VR + KG+ KE G S ++I V+ FVS D HPQS +IY+
Sbjct: 619 TLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYN 678
Query: 301 ILD 303
IL+
Sbjct: 679 ILE 681
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 3/142 (2%)
Query: 6 TQNGLNEKAIL-TLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQN 64
T N +E IL + + H V P+ LS +L AC + +IA+ LH ++++ + +
Sbjct: 83 TANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGESLHAYAVKTSLLSS 142
Query: 65 VYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLR 124
VY G++L+D Y + G I + VF+ MP +N+VT+T ++ G + LT + M R
Sbjct: 143 VYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAGRYKEGLTYFSEMSR 202
Query: 125 SGIKPDAVAFVAILSACSYAGL 146
S D F L AC AGL
Sbjct: 203 SEELSDTYTFAIALKAC--AGL 222
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 74/153 (48%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I Y + G KA+ T + +V PN T +S+ AC+S + + QLH +
Sbjct: 281 LIVAYKRIGQEVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLG 340
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ ++ +++ YS G + A +F M ++ ++++T++ Y Q G G +
Sbjct: 341 LNDSLSVSNSMMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFS 400
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEI 153
M +SG KP A ++LS +++ G ++
Sbjct: 401 WMRQSGTKPTDFALASLLSVSGNMAVIEGGRQV 433
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 185 bits (469), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 97/314 (30%), Positives = 170/314 (54%), Gaps = 3/314 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+ +G ++NG A+ + V PNA T+S++L + ++HGF +R
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKN 426
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + Y TALVD Y KSG + A +F + K+ ++ M+M Y G G + +
Sbjct: 427 LICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFS 486
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
ML +G++PDA+ F ++LS C +GLV EG + F+ M + I P+ EH C+ D+LGR
Sbjct: 487 VMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRS 546
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + EA++F++ + + IWG+ L +CK H EL ++ ++L +E + ++
Sbjct: 547 GYLDEAWDFIQTMSLKPDA-TIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHN--SANYM 603
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
++ N+Y+ WE+V+R+RN + + + S ++I V+ F + + HP G+IY
Sbjct: 604 MMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYF 663
Query: 301 ILDKLTMDIKDAGY 314
L KL ++K +GY
Sbjct: 664 ELYKLVSEMKKSGY 677
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 100/197 (50%), Gaps = 1/197 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+++GY GL++ AI L+ + + P+ ++SS+L A + G + +HG+ +R+
Sbjct: 196 LLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQ 255
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ +VY T L+D Y K+G + YA VF+ M KN V + +++ + + A L
Sbjct: 256 LWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMI 315
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M + GIKPDA+ + ++ S + G ++ L++ M K + P+ + + +
Sbjct: 316 RMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKM-KEKGVAPNVVSWTAIFSGCSKN 374
Query: 181 GRVVEAYEFVKQLGEDG 197
G A + ++ E+G
Sbjct: 375 GNFRNALKVFIKMQEEG 391
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 6/195 (3%)
Query: 7 QNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVY 66
++G EKA+ RE T+ +L CS+ A Q+HG+ +R ++ NV
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 67 AGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSG 126
+L+ YS++G + + VFN M ++N ++ +++ SY + G A+ L D M G
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 127 IKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG-----RVG 181
+KPD V + ++LS + GL + + + + M +I +KPST + + ++G
Sbjct: 186 LKPDIVTWNSLLSGYASKGLSKDAIAVLKRM-QIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 182 RVVEAYEFVKQLGED 196
+ + Y QL D
Sbjct: 245 KAIHGYILRNQLWYD 259
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 105/280 (37%), Positives = 161/280 (57%), Gaps = 8/280 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK---VIPNAVTLSSILPACSSTGSIAFATQLHGFSI 57
MIA YTQNG K L L +L + + P+ +TLSS++ A S G+ +F T + +
Sbjct: 300 MIACYTQNG-KPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYIT 358
Query: 58 RHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
H + + T+L+D Y K G + A +F+ + +K++V+Y+ M+M G +GM A +
Sbjct: 359 EHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMATEANS 418
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADML 177
L+ +M+ I P+ V F +LSA S++GLV EG + F SM K H ++PS +HY + DML
Sbjct: 419 LFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSM-KDHNLEPSADHYGIMVDML 477
Query: 178 GRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAG 237
GR GR+ EAYE +K + N +WG++L A H E G++ + +ET+ G
Sbjct: 478 GRAGRLEEAYELIKSMPMQPNA-GVWGALLLASGLHNNVEFGEIACSHCVKLETDP--TG 534
Query: 238 YHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVE 277
Y L+ IY+ G W++ VR+ I EK L K +GCS VE
Sbjct: 535 YLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 70/132 (53%), Gaps = 4/132 (3%)
Query: 26 VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAE 85
+ P++ ++S+L AC ++ +H ++++ + VY T LV YS+ G I A+
Sbjct: 100 IPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAK 159
Query: 86 NVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAG 145
F+ + EKN+V++ +++ Y + G A ++D + + DAV++ I+S+ + G
Sbjct: 160 KAFDDIAEKNTVSWNSLLHGYLESGELDEARRVFDKI----PEKDAVSWNLIISSYAKKG 215
Query: 146 LVDEGLEIFESM 157
+ +F +M
Sbjct: 216 DMGNACSLFSAM 227
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 3/139 (2%)
Query: 63 QNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSM 122
+N + ++ Y+K G + AE +F M +K+ + Y M+ Y Q+G + AL L+ M
Sbjct: 261 KNGVSWITMISGYTKLGDVQSAEELFRLMSKKDKLVYDAMIACYTQNGKPKDALKLFAQM 320
Query: 123 L--RSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
L S I+PD + +++SA S G G + ES + H IK + D+ +
Sbjct: 321 LERNSYIQPDEITLSSVVSANSQLGNTSFGTWV-ESYITEHGIKIDDLLSTSLIDLYMKG 379
Query: 181 GRVVEAYEFVKQLGEDGNV 199
G +A++ L + V
Sbjct: 380 GDFAKAFKMFSNLNKKDTV 398
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 184 bits (467), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 98/311 (31%), Positives = 170/311 (54%), Gaps = 4/311 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+GY +E A + + + P+ T +++L C++ S Q+H I+
Sbjct: 574 IISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVIKKE 633
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ +VY + LVD YSK G + + +F + ++ VT+ M+ Y HG G A+ L++
Sbjct: 634 LQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFE 693
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+ IKP+ V F++IL AC++ GL+D+GLE F M + + + P HY + D+LG+
Sbjct: 694 RMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKS 753
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNH-GYFELGKVVAEKLLSMETEKRVAGYH 239
G+V A E ++++ + + + IW ++LG C H E+ + LL ++ + A +
Sbjct: 754 GKVKRALELIREMPFEADDV-IWRTLLGVCTIHRNNVEVAEEATAALLRLDPQDSSA--Y 810
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
LLSN+YA+ G WE V +R + L KE GCS VE+ ++ F+ D+ HP+ EIY
Sbjct: 811 TLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIY 870
Query: 300 DILDKLTMDIK 310
+ L + ++K
Sbjct: 871 EELGLIYSEMK 881
Score = 97.8 bits (242), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 106/199 (53%), Gaps = 2/199 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI GY+Q KA+L + + + ++LS + AC+ ++ Q++G +I+
Sbjct: 353 MITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS 412
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ +V A +D Y K A++ A VF+ M +++V++ ++ ++ Q+G G L L+
Sbjct: 413 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFV 472
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
SMLRS I+PD F +IL AC+ G + G+EI S+VK + ++ C + DM +
Sbjct: 473 SMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIVK-SGMASNSSVGCSLIDMYSKC 530
Query: 181 GRVVEAYEFVKQLGEDGNV 199
G + EA + + + NV
Sbjct: 531 GMIEEAEKIHSRFFQRANV 549
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 11/218 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IAG QN L A+ +E + +S+L +C++ + QLH +++
Sbjct: 252 IIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD 311
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ TA +D Y+K + A+ +F+ N +Y M+ Y Q G +AL L+
Sbjct: 312 FAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFH 371
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVA----DM 176
++ SG+ D ++ + AC+ + EGL+I+ IK S CVA DM
Sbjct: 372 RLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGL-----AIKSSLSLDVCVANAAIDM 426
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
G+ + EA+ ++ V W +I+ A + +G
Sbjct: 427 YGKCQALAEAFRVFDEMRRRDAVS--WNAIIAAHEQNG 462
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 107/250 (42%), Gaps = 30/250 (12%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IA + QNG + + L ++ P+ T SIL AC+ GS+ + ++H ++
Sbjct: 454 IIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGYGMEIHSSIVKSG 512
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNS--------------------VTYT 100
M N G +L+D YSK G I AE + +R ++ + V++
Sbjct: 513 MASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRLQEMCVSWN 572
Query: 101 TMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKI 160
+++ Y A L+ M+ GI PD + +L C+ G +I ++
Sbjct: 573 SIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQIHAQVI-- 630
Query: 161 HKIKPSTEHYCC--VADMLGRVGRVVEA-YEFVKQLGEDGNVMEIWGSILGACKNHGYFE 217
K + ++ Y C + DM + G + ++ F K L D W +++ +HG E
Sbjct: 631 -KKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRD---FVTWNAMICGYAHHGKGE 686
Query: 218 LGKVVAEKLL 227
+ E+++
Sbjct: 687 EAIQLFERMI 696
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 70/142 (49%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M++GY QNG + K+I + + + T + IL CS + Q+HG +R
Sbjct: 151 MLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVG 210
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
D +V A +AL+D Y+K + VF +PEKNSV+++ ++ Q+ + AL +
Sbjct: 211 CDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFK 270
Query: 121 SMLRSGIKPDAVAFVAILSACS 142
M + + ++L +C+
Sbjct: 271 EMQKVNAGVSQSIYASVLRSCA 292
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 75/157 (47%), Gaps = 3/157 (1%)
Query: 63 QNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSM 122
++V + +++ YSKS + A + FN MP ++ V++ +M+ Y Q+G +++ ++ M
Sbjct: 112 RDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDM 171
Query: 123 LRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGR 182
R GI+ D F IL CS+ G++I +V++ + DM + R
Sbjct: 172 GREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRV-GCDTDVVAASALLDMYAKGKR 230
Query: 183 VVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELG 219
VE+ + + E +V W +I+ C + L
Sbjct: 231 FVESLRVFQGIPEKNSVS--WSAIIAGCVQNNLLSLA 265
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 184 bits (466), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 169/312 (54%), Gaps = 7/312 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI + QN E A R+ + P T+S ++ AC+ +++ Q+ G++I+
Sbjct: 430 MIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAALSSGEQIQGYAIKSG 489
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+D T+ + Y+KSG + A VF + + TY+ M+ S QHG AL +++
Sbjct: 490 IDAFTSVKTSSISMYAKSGNMPLANQVFIEVQNPDVATYSAMISSLAQHGSANEALNIFE 549
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
SM GIKP+ AF+ +L AC + GLV +GL+ F+ M ++I P+ +H+ C+ D+LGR
Sbjct: 550 SMKTHGIKPNQQAFLGVLIACCHGGLVTQGLKYFQCMKNDYRINPNEKHFTCLVDLLGRT 609
Query: 181 GRVVEAYEFVKQLG-EDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
GR+ +A + G +D V W ++L +C+ + +GK VAE+L ME E +G +
Sbjct: 610 GRLSDAENLILSSGFQDHPV--TWRALLSSCRVYKDSVIGKRVAERL--MELEPEASGSY 665
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
VLL NIY + G + + VR + ++G+ KE S + IG + F D HP S IY
Sbjct: 666 VLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPALSWIVIGNQTHSFAVADLSHPSSQMIY 725
Query: 300 DILDKLTMDIKD 311
+L+ TMD D
Sbjct: 726 TMLE--TMDNVD 735
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 12/169 (7%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVT--LSSILPACS---STGSIAFATQLHGF 55
+I+GY + G E+ + L A +H+ N T L S+L AC + G I +H +
Sbjct: 220 LISGYVRVGAAEEPLNLL--AKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCY 277
Query: 56 SIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHG----- 110
+ + M+ ++ TAL+D Y+K+G++ A +F+ MP KN VTY M+ + Q
Sbjct: 278 TAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDE 337
Query: 111 MGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
A L+ M R G++P F +L ACS A ++ G +I + K
Sbjct: 338 ASSEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICK 386
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 3/156 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+GYTQ G E+A+ EA + + T + L C + LHG + +
Sbjct: 119 LISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNG 178
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ Q V+ L+D YSK G + A ++F+R E++ V++ +++ Y + G L L
Sbjct: 179 LSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLA 238
Query: 121 SMLRSGIKPDAVAFVAILSACSY---AGLVDEGLEI 153
M R G+ A ++L AC G +++G+ I
Sbjct: 239 KMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAI 274
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 88/194 (45%), Gaps = 10/194 (5%)
Query: 36 ILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKN 95
+ + +GS+ HG I+ ++ +Y L++ Y K + +A +F+RMPE+N
Sbjct: 53 LFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERN 112
Query: 96 SVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFE 155
+++ +++ Y Q G +A+ L+ + +K D + L C +D G E+
Sbjct: 113 IISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLG-ELLH 171
Query: 156 SMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGY 215
+V ++ + + DM + G++ +A + E V W S++ GY
Sbjct: 172 GLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVS--WNSLIS-----GY 224
Query: 216 FELGKVVAEKLLSM 229
+G AE+ L++
Sbjct: 225 VRVG--AAEEPLNL 236
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 62/126 (49%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
P+ T S +L ACS+ ++ + Q+H ++ + + G+AL++ Y+ G+
Sbjct: 356 PSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSALIELYALMGSTEDGMQC 415
Query: 88 FNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLV 147
F +++ ++T+M+ + Q+ A L+ + S I+P+ ++SAC+ +
Sbjct: 416 FASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSSHIRPEEYTVSLMMSACADFAAL 475
Query: 148 DEGLEI 153
G +I
Sbjct: 476 SSGEQI 481
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 163/280 (58%), Gaps = 7/280 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G N E++ E + P+ TL +L ACS ++ + HG+ + H
Sbjct: 380 LITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCVVHG 439
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
N AL+D Y+K G + A+ VF+ M +++ V++ TM+ +G HG+G+ AL+L++
Sbjct: 440 YAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWNTMLFGFGIHGLGKEALSLFN 499
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK-IHKIKPSTEHYCCVADMLGR 179
SM +G+ PD V +AILSACS++GLVDEG ++F SM + + P +HY C+ D+L R
Sbjct: 500 SMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRGDFNVIPRIDHYNCMTDLLAR 559
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSM-ETEKRVAGY 238
G + EAY+FV ++ + ++ + G++L AC + ELG V++K+ S+ ET + +
Sbjct: 560 AGYLDEAYDFVNKMPFEPDI-RVLGTLLSACWTYKNAELGNEVSKKMQSLGETTESL--- 615
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEI 278
VLLSN Y+ WE+ R+R ++GL K G S V++
Sbjct: 616 -VLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWVDV 654
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 67/151 (44%), Gaps = 1/151 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI Y N EKA+ + L V P T +L AC+ +I +H
Sbjct: 74 MIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDGKLIHSHVNCSD 133
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++Y TALVD Y+K G + A VF+ MP+++ V + M+ + H + L+
Sbjct: 134 FATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCCLTDVIGLFL 193
Query: 121 SMLR-SGIKPDAVAFVAILSACSYAGLVDEG 150
M R G+ P+ V + A AG + EG
Sbjct: 194 DMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 7/155 (4%)
Query: 1 MIAGYTQNGLNEKAI-LTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
MI+G++ + I L L + + PN T+ + PA G++ +HG+ R
Sbjct: 175 MISGFSLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRM 234
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
++ T ++D Y+KS I YA VF+ +KN VT++ M+ Y ++ M + A ++
Sbjct: 235 GFSNDLVVKTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVF 294
Query: 120 DSMLRSG----IKPDAVAFVAILSACSYAGLVDEG 150
ML + + P A+ IL C+ G + G
Sbjct: 295 FQMLVNDNVAMVTPVAIGL--ILMGCARFGDLSGG 327
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 107/236 (45%), Gaps = 16/236 (6%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK----VIPNAVTLSSILPACSSTGSIAFATQLHGFS 56
MI GY +N + ++A + L++ V P A+ L IL C+ G ++ +H ++
Sbjct: 277 MIGGYVENEMIKEAGEVFFQMLVNDNVAMVTPVAIGL--ILMGCARFGDLSGGRCVHCYA 334
Query: 57 IRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRAL 116
++ ++ ++ Y+K G++ A F+ + K+ ++Y +++ + +
Sbjct: 335 VKAGFILDLTVQNTIISFYAKYGSLCDAFRQFSEIGLKDVISYNSLITGCVVNCRPEESF 394
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
L+ M SGI+PD + +L+ACS+ + G V +H +T + DM
Sbjct: 395 RLFHEMRTSGIRPDITTLLGVLTACSHLAALGHGSSCHGYCV-VHGYAVNTSICNALMDM 453
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEI--WGSILGACKNHGYFELGKVVAEKLLSME 230
+ G++ + K++ + + +I W ++L HG LGK SM+
Sbjct: 454 YTKCGKL----DVAKRVFDTMHKRDIVSWNTMLFGFGIHG---LGKEALSLFNSMQ 502
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 85/188 (45%), Gaps = 18/188 (9%)
Query: 35 SILPACSSTGSIAFATQLHGFSIRHFMDQNVY--AGTALVDT---YSKSGAISYAENVFN 89
S+L C + ++ +H +H + +++ + T LV+ Y+ + A +VF+
Sbjct: 4 SLLETCIRSRNLVLGQVIH----QHLLKRSLTLSSSTVLVNLTRLYASCNEVELARHVFD 59
Query: 90 RMPEK--NSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLV 147
+P N + + M+ +Y + +AL LY ML SG++P + +L AC+ +
Sbjct: 60 EIPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAI 119
Query: 148 DEGLEIFESMVKIHKIKPSTEHYCCVA--DMLGRVGRVVEAYEFVKQLGEDGNVMEIWGS 205
D+G ++ S V +T+ Y C A D + G + A + ++ + M W +
Sbjct: 120 DDG-KLIHSHVNCSDF--ATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRD--MVAWNA 174
Query: 206 ILGACKNH 213
++ H
Sbjct: 175 MISGFSLH 182
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 177/327 (54%), Gaps = 3/327 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++ Y Q+ E+A+ + +V PN T + +L + + + LHG ++
Sbjct: 309 IMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSG 368
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+V G ALV+ Y+KSG+I A F+ M ++ VT+ TM+ HG+GR AL +D
Sbjct: 369 YRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFD 428
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+ +G P+ + F+ +L ACS+ G V++GL F ++K ++P +HY C+ +L +
Sbjct: 429 RMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKA 488
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G +A +F++ + +V+ W ++L AC + LGK VAE ++E +G +V
Sbjct: 489 GMFKDAEDFMRTAPIEWDVVA-WRTLLNACYVRRNYRLGKKVAE--YAIEKYPNDSGVYV 545
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LLSNI+A+ EWE V +VR+ + +G+ KE G S + I + F++ D +HP+ IY
Sbjct: 546 LLSNIHAKSREWEGVAKVRSLMNNRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYA 605
Query: 301 ILDKLTMDIKDAGYKTRYNSSLNEIVE 327
+ ++ IK GY + +++ E
Sbjct: 606 KVKEVMSKIKPLGYSPDVAGAFHDVDE 632
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 14/232 (6%)
Query: 2 IAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFM 61
++GY + G ++ + LR+ + N +T S L S+ + A Q+H +R
Sbjct: 209 LSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGF 268
Query: 62 DQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDS 121
+ V A AL++ Y K G + YA+ VF+ +N TT+M +Y Q AL L+
Sbjct: 269 NAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSK 328
Query: 122 MLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCV----ADML 177
M + P+ F +L++ + L+ +G ++ +V +K ++ V +M
Sbjct: 329 MDTKEVPPNEYTFAILLNSIAELSLLKQG-DLLHGLV----LKSGYRNHVMVGNALVNMY 383
Query: 178 GRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSM 229
+ G + +A + G + W +++ C +HG LG+ E M
Sbjct: 384 AKSGSIEDARKAFS--GMTFRDIVTWNTMISGCSHHG---LGREALEAFDRM 430
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Query: 33 LSSILPACSSTGSIAFATQLHGFSI---RHFMDQNVYAGTALVDTYSKSGAISYAENVFN 89
L+ +L C+++ + +H I + ++ Y +L++ Y K A +F+
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARKLFD 93
Query: 90 RMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSG-IKPDAVAFVAILSACSYAGLVD 148
MPE+N V++ MM Y G L L+ SM SG +P+ + +CS +G ++
Sbjct: 94 LMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRIE 153
Query: 149 EGLEIFESMVK 159
EG + +K
Sbjct: 154 EGKQFHGCFLK 164
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 176/306 (57%), Gaps = 12/306 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GY G ++A+ +E P+ VT+ S+L AC+ G + +LH + +
Sbjct: 246 MISGYVNCGYPKEALGIFKEMRDAGEHPDVVTILSLLSACAVLGDLETGKRLHIYILETA 305
Query: 61 -MDQNVYAGT----ALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRA 115
+ ++Y GT AL+D Y+K G+I A VF + +++ T+ T+++ H +
Sbjct: 306 SVSSSIYVGTPIWNALIDMYAKCGSIDRAIEVFRGVKDRDLSTWNTLIVGLALH-HAEGS 364
Query: 116 LTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD 175
+ +++ M R + P+ V F+ ++ ACS++G VDEG + F M ++ I+P+ +HY C+ D
Sbjct: 365 IEMFEEMQRLKVWPNEVTFIGVILACSHSGRVDEGRKYFSLMRDMYNIEPNIKHYGCMVD 424
Query: 176 MLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRV 235
MLGR G++ EA+ FV+ + + N + +W ++LGACK +G ELGK EKLLSM ++
Sbjct: 425 MLGRAGQLEEAFMFVESMKIEPNAI-VWRTLLGACKIYGNVELGKYANEKLLSMRKDE-- 481
Query: 236 AGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGG---LVNYFVSRDEKH 292
+G +VLLSNIYA G+W+ V +VR + + K G SL+E ++ Y +S + +
Sbjct: 482 SGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKKPTGVSLIEEDDDKLMMRYLLSSEPES 541
Query: 293 PQSGEI 298
G I
Sbjct: 542 RSRGRI 547
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 93/223 (41%), Gaps = 13/223 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++ G Q+ EK + E V P+ T + +L ACS + HG +RH
Sbjct: 83 VLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHGKVVRHG 142
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
N Y AL+ ++ G + A +F+ + + V +++M Y + G A+ L+D
Sbjct: 143 FVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDEAMRLFD 202
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M D VA+ +++ C +D E+F+ + + + +
Sbjct: 203 EMPYK----DQVAWNVMITGCLKCKEMDSARELFDRFTEKDVVT-----WNAMISGYVNC 253
Query: 181 GRVVEAYEFVKQL---GEDGNVMEIWGSILGACKNHGYFELGK 220
G EA K++ GE +V+ I S+L AC G E GK
Sbjct: 254 GYPKEALGIFKEMRDAGEHPDVVTIL-SLLSACAVLGDLETGK 295
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/328 (31%), Positives = 182/328 (55%), Gaps = 4/328 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G QNG E + + + PN +T ++L +CS Q+H +I+
Sbjct: 163 LIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIG 222
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
V ++L+ YSK G + A F+ +++ V +++M+ +YG HG G A+ L++
Sbjct: 223 ASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFN 282
Query: 121 SML-RSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
+M ++ ++ + VAF+ +L ACS++GL D+GLE+F+ MV+ + KP +HY CV D+LGR
Sbjct: 283 TMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGR 342
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G + +A ++ + +++ IW ++L AC H E+ + V +++L ++ + +
Sbjct: 343 AGCLDQAEAIIRSMPIKTDIV-IWKTLLSACNIHKNAEMAQRVFKEILQIDPND--SACY 399
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
VLL+N++A W +V VR + +K + KE G S E G V+ F D +S EIY
Sbjct: 400 VLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIY 459
Query: 300 DILDKLTMDIKDAGYKTRYNSSLNEIVE 327
L +LT+++K GYK S L+++ E
Sbjct: 460 SYLKELTLEMKLKGYKPDTASVLHDMDE 487
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 7/229 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MIAG Q NE+ + RE P+ TL S+ + S++ Q+HG++I++
Sbjct: 62 MIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYG 121
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ ++ ++L Y ++G + E V MP +N V + T++M Q+G L LY
Sbjct: 122 LELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYK 181
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M SG +P+ + FV +LS+CS + +G +I +KI ++ M +
Sbjct: 182 MMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLIS-MYSKC 240
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGY----FELGKVVAEK 225
G + +A + + ++ VM W S++ A HG EL +AE+
Sbjct: 241 GCLGDAAKAFSEREDEDEVM--WSSMISAYGFHGQGDEAIELFNTMAEQ 287
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 151/278 (54%), Gaps = 6/278 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GY QNG +A E V P+ + ++ ACS G ++ + +
Sbjct: 275 LILGYAQNGQPNEAFKVFSEMCAKNVKPDEFIMVGLMSACSQMGCFELCEKVDSY-LHQR 333
Query: 61 MDQ--NVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
M++ + Y AL+D +K G + A +F MP+++ V+Y +MM HG G A+ L
Sbjct: 334 MNKFSSHYVVPALIDMNAKCGHMDRAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRL 393
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
++ M+ GI PD VAF IL C + LV+EGL FE M K + I S +HY C+ ++L
Sbjct: 394 FEKMVDEGIVPDEVAFTVILKVCGQSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLS 453
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
R G++ EAYE +K + + + WGS+LG C HG E+ +VVA L +E + AG
Sbjct: 454 RTGKLKEAYELIKSMPFEAHA-SAWGSLLGGCSLHGNTEIAEVVARHLFELEPQS--AGS 510
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLV 276
+VLLSNIYA W +V +R+++ E G+ K G S +
Sbjct: 511 YVLLSNIYAALDRWTDVAHLRDKMNENGITKICGRSWI 548
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 105/226 (46%), Gaps = 13/226 (5%)
Query: 1 MIAGYTQNGLN-EKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+I GY+ L E + +R P+ T ++ CS+ G + + +HG +R
Sbjct: 80 LIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVGSSVHGLVLRI 139
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
D++V GT+ VD Y K + A VF MPE+N+V++T ++++Y + G A +++
Sbjct: 140 GFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKSGELEEAKSMF 199
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
D M + ++ A++ +G + ++F+ M K I Y + D +
Sbjct: 200 DLMPERNLG----SWNALVDGLVKSGDLVNAKKLFDEMPKRDIIS-----YTSMIDGYAK 250
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGS-ILGACKNHGYFELGKVVAE 224
G +V A + ++ G + W + ILG +N E KV +E
Sbjct: 251 GGDMVSARDLFEE--ARGVDVRAWSALILGYAQNGQPNEAFKVFSE 294
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 66/135 (48%), Gaps = 4/135 (2%)
Query: 63 QNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSM 122
+++ + T+++D Y+K G + A ++F + ++ +++ Y Q+G A ++ M
Sbjct: 236 RDIISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEM 295
Query: 123 LRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVA--DMLGRV 180
+KPD V ++SACS G E E +S + ++ + HY A DM +
Sbjct: 296 CAKNVKPDEFIMVGLMSACSQMGCF-ELCEKVDSYLH-QRMNKFSSHYVVPALIDMNAKC 353
Query: 181 GRVVEAYEFVKQLGE 195
G + A + +++ +
Sbjct: 354 GHMDRAAKLFEEMPQ 368
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 180/306 (58%), Gaps = 7/306 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIP-NAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
M+ G++QNG + +AI +L + + H + N VT +++ ACSS GS+ +H I
Sbjct: 476 MLCGFSQNGNSVEAI-SLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIIS 534
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ ++++ TAL+D Y+K G ++ AE VF M ++ V++++M+ +YG HG A++ +
Sbjct: 535 GL-KDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTF 593
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
+ M+ SG KP+ V F+ +LSAC ++G V+EG F +++K + P++EH+ C D+L R
Sbjct: 594 NQMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYF-NLMKSFGVSPNSEHFACFIDLLSR 652
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G + EAY +K++ + +WGS++ C+ H ++ K + L + T+ GY+
Sbjct: 653 SGDLKEAYRTIKEMPFLADA-SVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDD--TGYY 709
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
LLSNIYAEEGEWE R+R+ + L K G S +EI V F + +E Q+ EIY
Sbjct: 710 TLLSNIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIEIDQKVFRFGAGEENRIQTDEIY 769
Query: 300 DILDKL 305
L L
Sbjct: 770 RFLGNL 775
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 106/215 (49%), Gaps = 5/215 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+ Y + +EKA+ + E + + PN VTL S+L +C G I +HGF++R
Sbjct: 274 MISSYNRGEFSEKALRSFSEMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRE 333
Query: 61 MDQNVYA-GTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+D N + ALV+ Y++ G +S E V + ++N V + +++ Y GM +AL L+
Sbjct: 334 LDPNYESLSLALVELYAECGKLSDCETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLF 393
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M+ IKPDA + +SAC AGLV G +I +++ ++ + DM +
Sbjct: 394 RQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTDVSDEFVQN--SLIDMYSK 451
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
G V A Q+ V W S+L +G
Sbjct: 452 SGSVDSASTVFNQIKHRSVV--TWNSMLCGFSQNG 484
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 89/150 (59%), Gaps = 1/150 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+ Y G+ +A+ R+ + ++ P+A TL+S + AC + G + Q+HG IR
Sbjct: 376 LISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPLGKQIHGHVIRTD 435
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + +L+D YSKSG++ A VFN++ ++ VT+ +M+ + Q+G A++L+D
Sbjct: 436 VSDE-FVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGNSVEAISLFD 494
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEG 150
M S ++ + V F+A++ ACS G +++G
Sbjct: 495 YMYHSYLEMNEVTFLAVIQACSSIGSLEKG 524
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/303 (22%), Positives = 139/303 (45%), Gaps = 41/303 (13%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+++ +NG KA+ + + V P+AVT+ S++ C+ G + A +HG R
Sbjct: 173 LVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKM 232
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
D + +L+ YSK G + +E +F ++ +KN+V++T M+ SY + +AL +
Sbjct: 233 FDLDETLCNSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFS 292
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYC-CVADMLGR 179
M++SGI+P+ V ++LS+C GL+ EG + V+ ++ P+ E + ++
Sbjct: 293 EMIKSGIEPNLVTLYSVLSSCGLIGLIREGKSVHGFAVR-RELDPNYESLSLALVELYAE 351
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSI--------------------------------- 206
G++ + E V ++ D N++ W S+
Sbjct: 352 CGKLSDC-ETVLRVVSDRNIVA-WNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLA 409
Query: 207 --LGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITE 264
+ AC+N G LGK + ++ + ++ ++Y++ G ++ V NQI
Sbjct: 410 SSISACENAGLVPLGKQIHGHVIRTDVSDEFVQNSLI--DMYSKSGSVDSASTVFNQIKH 467
Query: 265 KGL 267
+ +
Sbjct: 468 RSV 470
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 75/130 (57%), Gaps = 6/130 (4%)
Query: 22 LLHKVIPNAVTLS-----SILPACS-STGSIAFATQLHGFSIRHFMDQNVYAGTALVDTY 75
L H+++ +S S+L AC+ S ++ ++HG I+ +D + T+L+ Y
Sbjct: 87 LYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGRIIKGGVDDDAVIETSLLCMY 146
Query: 76 SKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFV 135
++G +S AE VF+ MP ++ V ++T++ S ++G +AL ++ M+ G++PDAV +
Sbjct: 147 GQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKALRMFKCMVDDGVEPDAVTMI 206
Query: 136 AILSACSYAG 145
+++ C+ G
Sbjct: 207 SVVEGCAELG 216
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 182 bits (461), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 99/311 (31%), Positives = 167/311 (53%), Gaps = 4/311 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G+ Q GL+E A+ ++ + S++L +CS ++ Q+H + +
Sbjct: 379 IITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQIHALATKSG 438
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNS-VTYTTMMMSYGQHGMGRRALTLY 119
N + ++L+ YSK G I A F ++ K+S V + M++ Y QHG+G+ +L L+
Sbjct: 439 FVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHGLGQVSLDLF 498
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M +K D V F AIL+ACS+ GL+ EGLE+ M ++KI+P EHY D+LGR
Sbjct: 499 SQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEPVYKIQPRMEHYAAAVDLLGR 558
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G V +A E ++ + + + M + + LG C+ G E+ VA LL +E E +
Sbjct: 559 AGLVNKAKELIESMPLNPDPM-VLKTFLGVCRACGEIEMATQVANHLLEIEPEDHFT--Y 615
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
V LS++Y++ +WE V+ + E+G+ K G S +EI V F + D +P +IY
Sbjct: 616 VSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIEIRNQVKAFNAEDRSNPLCQDIY 675
Query: 300 DILDKLTMDIK 310
++ LT +++
Sbjct: 676 MMIKDLTQEMQ 686
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 77/155 (49%), Gaps = 2/155 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MIAG++++ L E A + H V + T + +L ACS F LHG I+
Sbjct: 276 MIAGFSKHELKESAFELFIQMQRHWVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKG 335
Query: 61 MDQNVYAGTALVDTYSK--SGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
++Q A AL+ Y + +G + A ++F + K+ +++ +++ + Q G+ A+
Sbjct: 336 LEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKF 395
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEI 153
+ + S IK D AF A+L +CS + G +I
Sbjct: 396 FSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQQI 430
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 15/162 (9%)
Query: 53 HGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMG 112
H ++I+ ++Y ++D+Y K G + YA +F+ MP+++SV++ TM+ Y G
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 113 RRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCC 172
A L+ M RSG D +F +L + D G ++H + + C
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLG-------EQVHGLVIKGGYECN 135
Query: 173 V------ADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILG 208
V DM + RV +A+E K++ E +V W +++
Sbjct: 136 VYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVS--WNALIA 175
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 116/276 (42%), Gaps = 27/276 (9%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GYT G E A + + S +L +S Q+HG I+
Sbjct: 72 MISGYTSCGKLEDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGG 131
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ NVY G++LVD Y+K + A F + E NSV++ ++ + Q + A L
Sbjct: 132 YECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLG 191
Query: 121 SM-LRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK-IHK--IKPSTEHYCCVADM 176
M +++ + DA F +L+ L+D+ +F +++K +H +K +H + +
Sbjct: 192 LMEMKAAVTMDAGTFAPLLT------LLDD--PMFCNLLKQVHAKVLKLGLQHEITICNA 243
Query: 177 L----GRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETE 232
+ G V +A LG +++ W S++ H EL + E + M+
Sbjct: 244 MISSYADCGSVSDAKRVFDGLGGSKDLIS-WNSMIAGFSKH---ELKESAFELFIQMQR- 298
Query: 233 KRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLH 268
H + ++IY G +QI K LH
Sbjct: 299 ------HWVETDIYTYTGLLSACSGEEHQIFGKSLH 328
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 181 bits (459), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 177/318 (55%), Gaps = 13/318 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++ +NG E + + P+ T+ +L AC G+++ +H +
Sbjct: 185 IMTALVENGKLNLVFECFCEMIGKRFCPDETTMVVLLSACG--GNLSLGKLVHSQVMVRE 242
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ N GTALVD Y+KSG + YA VF RM +KN T++ M++ Q+G AL L+
Sbjct: 243 LELNCRLGTALVDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFS 302
Query: 121 SMLR-SGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M++ S ++P+ V F+ +L ACS+ GLVD+G + F M KIHKIKP HY + D+LGR
Sbjct: 303 KMMKESSVRPNYVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGR 362
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFE---LGKVVAEKLLSMETEKRVA 236
GR+ EAY+F+K++ + + + +W ++L AC H + +G+ V ++L+ +E ++ +
Sbjct: 363 AGRLNEAYDFIKKMPFEPDAV-VWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKR--S 419
Query: 237 GYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSG 296
G V+++N +AE W VR + E + K G S +E+GG + F S + +
Sbjct: 420 GNLVIVANRFAEARMWAEAAEVRRVMKETKMKKIAGESCLELGGSFHRFFSGYDPRSEYV 479
Query: 297 EIYDILD----KLTMDIK 310
IY++LD +LT D +
Sbjct: 480 SIYELLDLFKFQLTCDYR 497
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 95/214 (44%), Gaps = 5/214 (2%)
Query: 4 GYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQ 63
GY+ + ++I E + PN +T +L AC+S + Q+ ++H D
Sbjct: 87 GYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDF 146
Query: 64 NVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSML 123
+VY G L+ Y S A VF+ M E+N V++ ++M + ++G + M+
Sbjct: 147 DVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMI 206
Query: 124 RSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRV 183
PD V +LSAC G + G ++ S V + +++ + + DM + G
Sbjct: 207 GKRFCPDETTMVVLLSAC--GGNLSLG-KLVHSQVMVRELELNCRLGTALVDMYAKSGG- 262
Query: 184 VEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFE 217
+E V + D NV W +++ +G+ E
Sbjct: 263 LEYARLVFERMVDKNVW-TWSAMIVGLAQYGFAE 295
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 181 bits (459), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 102/317 (32%), Positives = 174/317 (54%), Gaps = 7/317 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI ++ GL+ +A+ + V ++ TL ++L +C+ ++ LH +
Sbjct: 179 MICCFSHVGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIR 238
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ V+ AL+D Y+K G++ A VFN M +++ +T+ +M++ YG HG G A++ +
Sbjct: 239 CESCVFVSNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFR 298
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+ SG++P+A+ F+ +L CS+ GLV EG+E FE M + P+ +HY C+ D+ GR
Sbjct: 299 KMVASGVRPNAITFLGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRA 358
Query: 181 GRVVEAYEFV--KQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
G++ + E + ED +W ++LG+CK H ELG+V +KL+ +E AG
Sbjct: 359 GQLENSLEMIYASSCHEDP---VLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFN--AGD 413
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEI 298
+VL+++IY+ + + +R I L G S +EIG V+ FV D+ HP+S I
Sbjct: 414 YVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVI 473
Query: 299 YDILDKLTMDIKDAGYK 315
Y L ++ AGYK
Sbjct: 474 YSELGEVINRAILAGYK 490
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 94/194 (48%), Gaps = 16/194 (8%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVI-PNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+I G++ + +IL LL V P+ T + L +C SI ++HG IR
Sbjct: 77 LIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSVIRS 136
Query: 60 -FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
F+D + A T+LV YS +G++ A VF+ MP ++ V++ M+ + G+ +AL++
Sbjct: 137 GFLDDAIVA-TSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQALSM 195
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCV----- 173
Y M G+ D+ VA+LS+C++ ++ G V +H+I CV
Sbjct: 196 YKRMGNEGVCGDSYTLVALLSSCAHVSALNMG-------VMLHRIACDIRCESCVFVSNA 248
Query: 174 -ADMLGRVGRVVEA 186
DM + G + A
Sbjct: 249 LIDMYAKCGSLENA 262
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 181 bits (458), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 99/306 (32%), Positives = 167/306 (54%), Gaps = 5/306 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+G+ Q + + + PN T +++L AC+ +G++ +H ++
Sbjct: 192 MISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMG 251
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ ++ +L+ Y K G + A +F++ K+ V++ +M+ Y QHG+ +A+ L++
Sbjct: 252 LKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFE 311
Query: 121 SML-RSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M+ +SG KPDA+ ++ +LS+C +AGLV EG + F M + H +KP HY C+ D+LGR
Sbjct: 312 LMMPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLMAE-HGLKPELNHYSCLVDLLGR 370
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G + EA E ++ + N + IWGS+L +C+ HG G AE+ L +E + A H
Sbjct: 371 FGLLQEALELIENMPMKPNSV-IWGSLLFSCRVHGDVWTGIRAAEERLMLEPD--CAATH 427
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
V L+N+YA G W+ VR + +KGL GCS +EI V F + D + + EI
Sbjct: 428 VQLANLYASVGYWKEAATVRKLMKDKGLKTNPGCSWIEINNYVFMFKAEDGSNCRMLEIV 487
Query: 300 DILDKL 305
+L L
Sbjct: 488 HVLHCL 493
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 83/186 (44%), Gaps = 3/186 (1%)
Query: 29 NAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVF 88
+A LSS + +C + H +++ +VY G++LV Y SG + A VF
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 89 NRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVD 148
MPE+N V++T M+ + Q L LY M +S P+ F A+LSAC+ +G +
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 149 EGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILG 208
+G + + + +K + M + G + +A+ Q V W S++
Sbjct: 239 QGRSVHCQTLHM-GLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVS--WNSMIA 295
Query: 209 ACKNHG 214
HG
Sbjct: 296 GYAQHG 301
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 171/327 (52%), Gaps = 3/327 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M+A +G E+ + + + V + + S L A + + QLHG +++
Sbjct: 536 MLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLG 595
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + + A D YSK G I + ++ ++ ++ + G+HG +
Sbjct: 596 FEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFH 655
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
ML GIKP V FV++L+ACS+ GLVD+GL ++ + + ++P+ EH CV D+LGR
Sbjct: 656 EMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRS 715
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
GR+ EA F+ ++ N + +W S+L +CK HG + G+ AE L +E E +V
Sbjct: 716 GRLAEAETFISKMPMKPNDL-VWRSLLASCKIHGNLDRGRKAAENLSKLEPEDD--SVYV 772
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
L SN++A G WE+V+ VR Q+ K + K+ CS V++ V+ F D HPQ+ EIY
Sbjct: 773 LSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYA 832
Query: 301 ILDKLTMDIKDAGYKTRYNSSLNEIVE 327
L+ + IK++GY + +L + E
Sbjct: 833 KLEDIKKLIKESGYVADTSQALQDTDE 859
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 6/219 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSI-AFATQLHGFSIRH 59
+I GY ++ +KA+ + + V N +T+ S+L AC G + LH + +
Sbjct: 434 LIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA 493
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ + + +L+ Y+K G +S ++++FN + +N +T+ M+ + HG G L L
Sbjct: 494 GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLV 553
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M G+ D +F LSA + +++EG ++ VK+ + + + ADM +
Sbjct: 554 SKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL-GFEHDSFIFNAAADMYSK 612
Query: 180 VGRVVEAYEFVKQLGEDGN-VMEIWGSILGACKNHGYFE 217
G E E VK L N + W ++ A HGYFE
Sbjct: 613 CG---EIGEVVKMLPPSVNRSLPSWNILISALGRHGYFE 648
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 10/221 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAF-ATQLHGFSIRH 59
M++G + GL + + R+ + P++ ++S++ AC +GS+ Q+HGF +
Sbjct: 29 MMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKS 88
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ +VY TA++ Y G +S + VF MP++N V++T++M+ Y G + +Y
Sbjct: 89 GLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY 148
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGL--EIFESMVKIH-KIKPSTEHYCCVADM 176
M G+ + + ++S+C L DE L +I +VK + K + E+ + M
Sbjct: 149 KGMRGEGVGCNENSMSLVISSCGL--LKDESLGRQIIGQVVKSGLESKLAVEN--SLISM 204
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFE 217
LG +G V A Q+ E + W SI A +G+ E
Sbjct: 205 LGSMGNVDYANYIFDQMSERDTIS--WNSIAAAYAQNGHIE 243
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 7/209 (3%)
Query: 3 AGYTQNGLNEKA--ILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
A Y QNG E++ I +L +V N+ T+S++L + +HG ++
Sbjct: 234 AAYAQNGHIEESFRIFSLMRRFHDEV--NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG 291
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
D V L+ Y+ +G A VF +MP K+ +++ ++M S+ G AL L
Sbjct: 292 FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLC 351
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
SM+ SG + V F + L+AC ++G I +V + + + + M G++
Sbjct: 352 SMISSGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKI 410
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGA 209
G + E+ + Q+ V W +++G
Sbjct: 411 GEMSESRRVLLQMPRRDVVA--WNALIGG 437
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 6/219 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++A + +G + A+ L + N VT +S L AC + LHG +
Sbjct: 333 LMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSG 392
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ N G ALV Y K G +S + V +MP ++ V + ++ Y + +AL +
Sbjct: 393 LFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ 452
Query: 121 SMLRSGIKPDAVAFVAILSACSYAG-LVDEGLEIFESMVKIHKIKPSTEHY-CCVADMLG 178
+M G+ + + V++LSAC G L++ G + +V S EH + M
Sbjct: 453 TMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG--FESDEHVKNSLITMYA 510
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFE 217
+ G + + + G D + W ++L A +HG+ E
Sbjct: 511 KCGDLSSSQDLFN--GLDNRNIITWNAMLAANAHHGHGE 547
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 95/218 (43%), Gaps = 11/218 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++ GY+ G E+ I + V N ++S ++ +C + Q+ G ++
Sbjct: 131 LMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSG 190
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ + +L+ G + YA +F++M E++++++ ++ +Y Q+G + ++
Sbjct: 191 LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFS 250
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M R + ++ +LS + G I +VK+ + CV + L R+
Sbjct: 251 LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKM-----GFDSVVCVCNTLLRM 305
Query: 181 ----GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
GR VEA KQ+ + W S++ + N G
Sbjct: 306 YAGAGRSVEANLVFKQMPTKDLIS--WNSLMASFVNDG 341
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 1/80 (1%)
Query: 75 YSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAF 134
Y+K G + A ++F+ MP +N V++ TMM + G+ + + M GIKP +
Sbjct: 2 YTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVI 61
Query: 135 VAILSACSYAG-LVDEGLEI 153
++++AC +G + EG+++
Sbjct: 62 ASLVTACGRSGSMFREGVQV 81
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 179 bits (455), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/327 (31%), Positives = 171/327 (52%), Gaps = 3/327 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M+A +G E+ + + + V + + S L A + + QLHG +++
Sbjct: 519 MLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLG 578
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + + A D YSK G I + ++ ++ ++ + G+HG +
Sbjct: 579 FEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFH 638
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
ML GIKP V FV++L+ACS+ GLVD+GL ++ + + ++P+ EH CV D+LGR
Sbjct: 639 EMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRS 698
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
GR+ EA F+ ++ N + +W S+L +CK HG + G+ AE L +E E +V
Sbjct: 699 GRLAEAETFISKMPMKPNDL-VWRSLLASCKIHGNLDRGRKAAENLSKLEPEDD--SVYV 755
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
L SN++A G WE+V+ VR Q+ K + K+ CS V++ V+ F D HPQ+ EIY
Sbjct: 756 LSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYA 815
Query: 301 ILDKLTMDIKDAGYKTRYNSSLNEIVE 327
L+ + IK++GY + +L + E
Sbjct: 816 KLEDIKKLIKESGYVADTSQALQDTDE 842
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 104/219 (47%), Gaps = 6/219 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSI-AFATQLHGFSIRH 59
+I GY ++ +KA+ + + V N +T+ S+L AC G + LH + +
Sbjct: 417 LIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA 476
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ + + +L+ Y+K G +S ++++FN + +N +T+ M+ + HG G L L
Sbjct: 477 GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLV 536
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M G+ D +F LSA + +++EG ++ VK+ + + + ADM +
Sbjct: 537 SKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKL-GFEHDSFIFNAAADMYSK 595
Query: 180 VGRVVEAYEFVKQLGEDGN-VMEIWGSILGACKNHGYFE 217
G E E VK L N + W ++ A HGYFE
Sbjct: 596 CG---EIGEVVKMLPPSVNRSLPSWNILISALGRHGYFE 631
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 109/221 (49%), Gaps = 10/221 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAF-ATQLHGFSIRH 59
M++G + GL + + R+ + P++ ++S++ AC +GS+ Q+HGF +
Sbjct: 12 MMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKS 71
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ +VY TA++ Y G +S + VF MP++N V++T++M+ Y G + +Y
Sbjct: 72 GLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIY 131
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGL--EIFESMVKIH-KIKPSTEHYCCVADM 176
M G+ + + ++S+C L DE L +I +VK + K + E+ + M
Sbjct: 132 KGMRGEGVGCNENSMSLVISSCGL--LKDESLGRQIIGQVVKSGLESKLAVEN--SLISM 187
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFE 217
LG +G V A Q+ E + W SI A +G+ E
Sbjct: 188 LGSMGNVDYANYIFDQMSERDTIS--WNSIAAAYAQNGHIE 226
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 95/209 (45%), Gaps = 7/209 (3%)
Query: 3 AGYTQNGLNEKA--ILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
A Y QNG E++ I +L +V N+ T+S++L + +HG ++
Sbjct: 217 AAYAQNGHIEESFRIFSLMRRFHDEV--NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG 274
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
D V L+ Y+ +G A VF +MP K+ +++ ++M S+ G AL L
Sbjct: 275 FDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLC 334
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
SM+ SG + V F + L+AC ++G I +V + + + + M G++
Sbjct: 335 SMISSGKSVNYVTFTSALAACFTPDFFEKG-RILHGLVVVSGLFYNQIIGNALVSMYGKI 393
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGA 209
G + E+ + Q+ V W +++G
Sbjct: 394 GEMSESRRVLLQMPRRDVVA--WNALIGG 420
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 6/219 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++A + +G + A+ L + N VT +S L AC + LHG +
Sbjct: 316 LMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSG 375
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ N G ALV Y K G +S + V +MP ++ V + ++ Y + +AL +
Sbjct: 376 LFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQ 435
Query: 121 SMLRSGIKPDAVAFVAILSACSYAG-LVDEGLEIFESMVKIHKIKPSTEHY-CCVADMLG 178
+M G+ + + V++LSAC G L++ G + +V S EH + M
Sbjct: 436 TMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG--FESDEHVKNSLITMYA 493
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFE 217
+ G + + + G D + W ++L A +HG+ E
Sbjct: 494 KCGDLSSSQDLFN--GLDNRNIITWNAMLAANAHHGHGE 530
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/218 (20%), Positives = 95/218 (43%), Gaps = 11/218 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++ GY+ G E+ I + V N ++S ++ +C + Q+ G ++
Sbjct: 114 LMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSG 173
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ + +L+ G + YA +F++M E++++++ ++ +Y Q+G + ++
Sbjct: 174 LESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFS 233
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M R + ++ +LS + G I +VK+ + CV + L R+
Sbjct: 234 LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKM-----GFDSVVCVCNTLLRM 288
Query: 181 ----GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
GR VEA KQ+ + W S++ + N G
Sbjct: 289 YAGAGRSVEANLVFKQMPTKDLIS--WNSLMASFVNDG 324
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/291 (36%), Positives = 164/291 (56%), Gaps = 14/291 (4%)
Query: 1 MIAGYTQNGLNEKA--ILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
M+AGY QN + +A I + E H ++P+ TL +LPA + G ++ A +H + +
Sbjct: 320 MMAGYVQNKYHMEALEIFSDMEKESH-LLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVE 378
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
G AL+D YSK G+I +A VF + K+ + M+ HG+G A +
Sbjct: 379 KQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLAIHGLGESAFDM 438
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+ R +KPD + FV +L+ACS++GLV EGL FE M + HKI+P +HY C+ D+L
Sbjct: 439 LLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILS 498
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
R G + A ++++ + N + IW + L AC +H FE G++VA+ L+ AGY
Sbjct: 499 RSGSIELAKNLIEEMPVEPNDV-IWRTFLTACSHHKEFETGELVAKHLILQ------AGY 551
Query: 239 ----HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYF 285
+VLLSN+YA G W++V RVR + E+ + K GCS +E+ G V+ F
Sbjct: 552 NPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWIELDGRVHEF 602
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 93/191 (48%), Gaps = 15/191 (7%)
Query: 1 MIAGYTQNGLNEKAILTLREA--LLHKVIPNAVTLSSILPACSSTGS-IAFATQLHGFSI 57
MI GY + GL I++ RE L+ + N ++ +S++ + T + A++L
Sbjct: 193 MIDGYVKCGL----IVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFA--- 245
Query: 58 RHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
++++ + +++D Y K G I A+ +F+ MP ++ VT+ TM+ Y + G A T
Sbjct: 246 -DMPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKT 304
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADML 177
L+D M D VA+ ++++ E LEIF M K + P V +
Sbjct: 305 LFDQMPHR----DVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAI 360
Query: 178 GRVGRVVEAYE 188
++GR+ +A +
Sbjct: 361 AQLGRLSKAID 371
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 53/94 (56%)
Query: 29 NAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVF 88
+ +LS +L ACS G + Q+HGF + + +++ L+ Y K G + + +F
Sbjct: 120 DKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMF 179
Query: 89 NRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSM 122
+RMP+++SV+Y +M+ Y + G+ A L+D M
Sbjct: 180 DRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLM 213
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 179 bits (453), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 96/280 (34%), Positives = 163/280 (58%), Gaps = 12/280 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MIA Y +EKAI + P+++TL ++L AC +TGS+ +H +
Sbjct: 504 MIASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETE 563
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ N+ AL+D Y+K G + + +F+ +K++V + M+ YG HG A+ L+D
Sbjct: 564 HEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFD 623
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHK--IKPSTEHYCCVADMLG 178
M S +KP F+A+LSAC++AGLV++G ++F +K+H+ +KP+ +HY C+ D+L
Sbjct: 624 QMEESDVKPTGPTFLALLSACTHAGLVEQGKKLF---LKMHQYDVKPNLKHYSCLVDLLS 680
Query: 179 RVGRVVEAYEFVKQL--GEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVA 236
R G + EA V + DG IWG++L +C HG FE+G +AE+ ++ ++ +
Sbjct: 681 RSGNLEEAESTVMSMPFSPDG---VIWGTLLSSCMTHGEFEMGIRMAER--AVASDPQND 735
Query: 237 GYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLV 276
GY+++L+N+Y+ G+WE +R R + E G+ K G S+V
Sbjct: 736 GYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHSVV 775
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 110/251 (43%), Gaps = 20/251 (7%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M+ GY + + K I R+ + ++ + +S++ +CS G++ LH + ++
Sbjct: 404 MLKGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTS 463
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+D + +L+D Y K G ++ A +F + N +T+ M+ SY +A+ L+D
Sbjct: 464 LDLTISVVNSLIDLYGKMGDLTVAWRMFCE-ADTNVITWNAMIASYVHCEQSEKAIALFD 522
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEH------YCCVA 174
M+ KP ++ V +L AC G ++ G IH+ TEH +
Sbjct: 523 RMVSENFKPSSITLVTLLMACVNTGSLERG-------QMIHRYITETEHEMNLSLSAALI 575
Query: 175 DMLGRVGRVVEAYEFVKQLGEDGNVME--IWGSILGACKNHGYFELGKVVAEKLLSMETE 232
DM + G + E ++L + GN + W ++ HG E + +++ + +
Sbjct: 576 DMYAKCGHL----EKSRELFDAGNQKDAVCWNVMISGYGMHGDVESAIALFDQMEESDVK 631
Query: 233 KRVAGYHVLLS 243
+ LLS
Sbjct: 632 PTGPTFLALLS 642
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 99/212 (46%), Gaps = 9/212 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKV-----IPNAVTLSSILPACSSTGSIAFATQLHGF 55
+I+G+ QNG +E + L + +H PN TL ACS+ G++ LHGF
Sbjct: 198 IISGHVQNGESEGGLGYLCK--MHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGF 255
Query: 56 SIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRA 115
++++ + + + +++ YSKSG S A F + +++ ++T+++ S + G +
Sbjct: 256 AVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEES 315
Query: 116 LTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD 175
++ M G+ PD V +++ LV +G + F V H + +
Sbjct: 316 FDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQG-KAFHGFVIRHCFSLDSTVCNSLLS 374
Query: 176 MLGRVGRVVEAYEFVKQLGEDGNVMEIWGSIL 207
M + + A + ++ E+GN E W ++L
Sbjct: 375 MYCKFELLSVAEKLFCRISEEGN-KEAWNTML 405
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 94/221 (42%), Gaps = 7/221 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I + NG +++ LL P+ T ++ AC+ T +HG ++H
Sbjct: 96 IIKAHFSNGDYARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHG 155
Query: 61 -MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
D+N G + V YSK G + A VF+ MP+++ V +T ++ + Q+G L
Sbjct: 156 GFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYL 215
Query: 120 DSMLRSGI---KPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
M +G KP+ ACS G + EG + VK + + S +
Sbjct: 216 CKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVK-NGLASSKFVQSSMFSF 274
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFE 217
+ G EAY ++LG++ M W SI+ + G E
Sbjct: 275 YSKSGNPSEAYLSFRELGDED--MFSWTSIIASLARSGDME 313
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/316 (21%), Positives = 129/316 (40%), Gaps = 45/316 (14%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IA ++G E++ E + P+ V +S ++ + HGF IRH
Sbjct: 302 IIASLARSGDMEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHC 361
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK-NSVTYTTMMMSYGQHGMGRRALTLY 119
+ +L+ Y K +S AE +F R+ E+ N + TM+ YG+ + + L+
Sbjct: 362 FSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELF 421
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
+ GI+ D+ + +++S+CS+ G V G + +VK + + + D+ G+
Sbjct: 422 RKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKT-SLDLTISVVNSLIDLYGK 480
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWG----------------------------------- 204
+G + A+ + D NV+ W
Sbjct: 481 MGDLTVAWRMFCE--ADTNVI-TWNAMIASYVHCEQSEKAIALFDRMVSENFKPSSITLV 537
Query: 205 SILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITE 264
++L AC N G E G+++ + E E ++ L+ ++YA+ G E ++ +
Sbjct: 538 TLLMACVNTGSLERGQMIHRYITETEHEMNLSLSAALI-DMYAKCGHLEK----SRELFD 592
Query: 265 KGLHKEMGCSLVEIGG 280
G K+ C V I G
Sbjct: 593 AGNQKDAVCWNVMISG 608
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 178 bits (452), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/293 (34%), Positives = 164/293 (55%), Gaps = 4/293 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIP-NAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+I+GY QN KA+L E V ++ T+ S+L ACSS G++ +H IR
Sbjct: 418 IISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRS 477
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
F+ TALVD YSK G + A+ F+ + K+ V++ ++ YG HG G AL +Y
Sbjct: 478 FIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAGYGFHGKGDIALEIY 537
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
L SG++P+ V F+A+LS+CS+ G+V +GL+IF SMV+ ++P+ EH CV D+L R
Sbjct: 538 SEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEPNHEHLACVVDLLCR 597
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
R+ +A++F K+ ++ ++ G IL AC+ +G E+ ++ E ++ E + AG++
Sbjct: 598 AKRIEDAFKFYKENFTRPSI-DVLGIILDACRANGKTEVEDIICEDMI--ELKPGDAGHY 654
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKH 292
V L + +A W++V NQ+ GL K G S +E+ G F H
Sbjct: 655 VKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIEMNGKTTTFFMNHTSH 707
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 74/134 (55%)
Query: 6 TQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNV 65
+ +G +++ + T L +K++P+ T S+L AC+S ++F +H + + +
Sbjct: 22 SSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDF 81
Query: 66 YAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRS 125
Y ++LV+ Y+K G +++A VF M E++ V +T M+ Y + G+ A +L + M
Sbjct: 82 YISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQ 141
Query: 126 GIKPDAVAFVAILS 139
GIKP V + +LS
Sbjct: 142 GIKPGPVTLLEMLS 155
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 104/215 (48%), Gaps = 4/215 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+G + G EKA++ E L ++ ++S++ +C+ GS +HG+ +RH
Sbjct: 317 MISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHG 376
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ A +L+ Y+K G + + +F RM E++ V++ ++ Y Q+ +AL L++
Sbjct: 377 YTLDTPALNSLITMYAKCGHLDKSLVIFERMNERDLVSWNAIISGYAQNVDLCKALLLFE 436
Query: 121 SM-LRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M ++ + D+ V++L ACS AG + G ++ +V I+P + + DM +
Sbjct: 437 EMKFKTVQQVDSFTVVSLLQACSSAGALPVG-KLIHCIVIRSFIRPCSLVDTALVDMYSK 495
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
G + A + V WG ++ HG
Sbjct: 496 CGYLEAAQRCFDSISWKDVVS--WGILIAGYGFHG 528
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 109/254 (42%), Gaps = 35/254 (13%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI Y++ G+ +A + E + P VTL +L S I LH F++ +
Sbjct: 118 MIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEML---SGVLEITQLQCLHDFAVIYG 174
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
D ++ ++++ Y K + A+++F++M +++ V++ TM+ Y G L L
Sbjct: 175 FDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLY 234
Query: 121 SMLRSGIKPDAVAFVAILSA----CS-------YAGLVDEGLEIF--------------- 154
M G++PD F A LS C + +V G ++
Sbjct: 235 RMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCG 294
Query: 155 --ESMVKIHKIKPSTEHYCCVADMLG--RVGRVVEAYEFVKQLGEDGNVM--EIWGSILG 208
E+ ++ + P+ + C + G R+GR +A ++ + G+ + E S++
Sbjct: 295 KEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVA 354
Query: 209 ACKNHGYFELGKVV 222
+C G F+LG V
Sbjct: 355 SCAQLGSFDLGASV 368
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 178 bits (451), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/329 (32%), Positives = 180/329 (54%), Gaps = 11/329 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQL-HGFSIRH 59
+IAG +A+ + + + VT+ + L ACS G + + HG+S
Sbjct: 181 LIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS--- 237
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSV-TYTTMMMSYGQHGMGRRALTL 118
+ NV A +D YSK G + A VF + K SV T+ TM+ + HG RAL +
Sbjct: 238 --NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEI 295
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+D + +GIKPD V+++A L+AC +AGLV+ GL +F +M ++ + +HY CV D+L
Sbjct: 296 FDKLEDNGIKPDDVSYLAALTACRHAGLVEYGLSVFNNMA-CKGVERNMKHYGCVVDLLS 354
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
R GR+ EA++ + + + + +W S+LGA + + E+ ++ + ++ M G
Sbjct: 355 RAGRLREAHDIICSMSMIPDPV-LWQSLLGASEIYSDVEMAEIASREIKEMGVNN--DGD 411
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEI 298
VLLSN+YA +G W++V RVR+ + K + K G S +E G ++ F + D+ H Q EI
Sbjct: 412 FVLLSNVYAAQGRWKDVGRVRDDMESKQVKKIPGLSYIEAKGTIHEFYNSDKSHEQWREI 471
Query: 299 YDILDKLTMDIKDAGYKTRYNSSLNEIVE 327
Y+ +D++ I++ GY + L++I E
Sbjct: 472 YEKIDEIRFKIREDGYVAQTGLVLHDIGE 500
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 83/186 (44%), Gaps = 6/186 (3%)
Query: 29 NAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVF 88
+A+T S L AC+ + QLH R + + T L+D YSK+G + A +F
Sbjct: 108 DALTCSFTLKACARALCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLF 167
Query: 89 NRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVD 148
+ MP ++ ++ ++ A+ LY M GI+ V VA L ACS+ G V
Sbjct: 168 DEMPVRDVASWNALIAGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVK 227
Query: 149 EGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILG 208
EG IF + I + DM + G V +AY+ +Q +V+ W +++
Sbjct: 228 EGENIFHGYSNDNVIVSNA-----AIDMYSKCGFVDKAYQVFEQFTGKKSVV-TWNTMIT 281
Query: 209 ACKNHG 214
HG
Sbjct: 282 GFAVHG 287
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 177 bits (450), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 100/282 (35%), Positives = 161/282 (57%), Gaps = 10/282 (3%)
Query: 1 MIAGYTQ-NGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+I G++Q N A ++ + K + V +SS+L C++ S+ Q+HGF+++
Sbjct: 286 LITGFSQQNNCTSDAFDIFKDMIRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKS 345
Query: 60 FMDQ-NVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+ +V G +L+D Y+KSG I A F M EK+ ++T+++ YG+HG +A+ L
Sbjct: 346 SQIRFDVALGNSLIDMYAKSGEIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGNFEKAIDL 405
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
Y+ M IKP+ V F+++LSACS+ G + G +I+++M+ H I+ EH C+ DML
Sbjct: 406 YNRMEHERIKPNDVTFLSLLSACSHTGQTELGWKIYDTMINKHGIEAREEHLSCIIDMLA 465
Query: 179 RVGRVVEAYEFVKQLGEDGNV---MEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRV 235
R G + EAY ++ ++G V WG+ L AC+ HG +L KV A +LLSME K V
Sbjct: 466 RSGYLEEAYALIR--SKEGIVSLSSSTWGAFLDACRRHGNVQLSKVAATQLLSMEPRKPV 523
Query: 236 AGYHVLLSNIYAEEGEWENVDRVRNQITEKG-LHKEMGCSLV 276
++ L+++YA G W+N R + E G +K G SLV
Sbjct: 524 N--YINLASVYAANGAWDNALNTRKLMKESGSCNKAPGYSLV 563
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+ +++ G + A+L +E V N T S+L +C G + Q+HG +
Sbjct: 84 MISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEKGN 143
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
N+ +AL+ Y++ G + A F+ M E++ V++ M+ Y + + +L+
Sbjct: 144 CAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTSFSLFQ 203
Query: 121 SMLRSGIKPDAVAFVAILSA 140
ML G KPD F ++L A
Sbjct: 204 LMLTEGKKPDCFTFGSLLRA 223
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 59/108 (54%)
Query: 52 LHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGM 111
+HG SI + N+ L+D Y K G + +A +F+R+ +++ V++T M+ + + G
Sbjct: 34 IHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDVVSWTAMISRFSRCGY 93
Query: 112 GRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
AL L+ M R +K + + ++L +C G + EG++I S+ K
Sbjct: 94 HPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGSVEK 141
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 177 bits (449), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 158/269 (58%), Gaps = 4/269 (1%)
Query: 6 TQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNV 65
T++G + +AI R+ + + PN +TL +++ ACS+ G+ ++H ++ R+ ++ +
Sbjct: 159 TEDG-SYRAIEFYRKMIEFRFKPNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHP 217
Query: 66 YAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRS 125
+ LV+ Y + G+I Y + VF+ M +++ V +++++ +Y HG AL + M +
Sbjct: 218 QLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELA 277
Query: 126 GIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVE 185
+ PD +AF+ +L ACS+AGL DE L F+ M + ++ S +HY C+ D+L RVGR E
Sbjct: 278 KVTPDDIAFLNVLKACSHAGLADEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEE 337
Query: 186 AYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNI 245
AY+ ++ + E + WG++LGAC+N+G EL ++ A +LL +E E +VLL I
Sbjct: 338 AYKVIQAMPEKPTA-KTWGALLGACRNYGEIELAEIAARELLMVEPEN--PANYVLLGKI 394
Query: 246 YAEEGEWENVDRVRNQITEKGLHKEMGCS 274
Y G E +R+R ++ E G+ G S
Sbjct: 395 YMSVGRQEEAERLRLKMKESGVKVSPGSS 423
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 117/281 (41%), Gaps = 50/281 (17%)
Query: 2 IAGYTQNGLNEKAILTLREALLHKVIP-NAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++ Y G +E+A+ + +P +A S L +C++ +H S++
Sbjct: 19 LSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVKSN 78
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
N + G AL+D Y K ++S+A +F+ +P++N+V + M+ Y G + A+ LY+
Sbjct: 79 FLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKEAVELYE 138
Query: 121 S---------------------------------MLRSGIKPDAVAFVAILSACSYAGLV 147
+ M+ KP+ + +A++SACS G
Sbjct: 139 AMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSACSAIG-- 196
Query: 148 DEGLEIFESMVKIHK------IKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVME 201
F + +IH I+P + + + GR G +V + V ED +V+
Sbjct: 197 -----AFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYV-QLVFDSMEDRDVVA 250
Query: 202 IWGSILGACKNHGYFELG-KVVAEKLLSMETEKRVAGYHVL 241
W S++ A HG E K E L+ T +A +VL
Sbjct: 251 -WSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVL 290
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/277 (32%), Positives = 155/277 (55%), Gaps = 4/277 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK-VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+I+G Q+G A + +L ++P+A+T++S+L CS + +LHG+++R+
Sbjct: 419 VISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRN 478
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ + TAL+D Y+K G AE+VF + + T+ +M+ Y G+ RAL+ Y
Sbjct: 479 NFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSGLQHRALSCY 538
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M G+KPD + F+ +LSAC++ G VDEG F +M+K I P+ +HY + +LGR
Sbjct: 539 LEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHYALMVGLLGR 598
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
EA + ++ + +WG++L AC H E+G+ VA K+ ++ + G +
Sbjct: 599 ACLFTEALYLIWKMDIKPD-SAVWGALLSACIIHRELEVGEYVARKMFMLDYKN--GGLY 655
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLV 276
VL+SN+YA E W++V RVRN + + G +G S +
Sbjct: 656 VLMSNLYATEAMWDDVVRVRNMMKDNGYDGYLGVSQI 692
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 73/140 (52%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GY++NG A L P+A TL ++LP C G ++ +HG + +
Sbjct: 122 LICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSG 181
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ + AL+ YSK + AE +F M +K++V++ TM+ +Y Q G+ A+T++
Sbjct: 182 LELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFK 241
Query: 121 SMLRSGIKPDAVAFVAILSA 140
+M ++ V + +LSA
Sbjct: 242 NMFEKNVEISPVTIINLLSA 261
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 73/144 (50%), Gaps = 4/144 (2%)
Query: 10 LNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSI---RHFMDQNVY 66
++ I R+ L + PN T+S L A ++T +F Q+ + +D+ VY
Sbjct: 28 ISSSPITIFRDLLRSSLTPNHFTMSIFLQA-TTTSFNSFKLQVEQVQTHLTKSGLDRFVY 86
Query: 67 AGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSG 126
T+L++ Y K G ++ A+ +F+ MPE+++V + ++ Y ++G A L+ ML+ G
Sbjct: 87 VKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQG 146
Query: 127 IKPDAVAFVAILSACSYAGLVDEG 150
P A V +L C G V +G
Sbjct: 147 FSPSATTLVNLLPFCGQCGFVSQG 170
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 6/153 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI Y+Q+GL E+AI + V + VT+ ++L A S LH ++
Sbjct: 223 MIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIINLLSAHVS------HEPLHCLVVKCG 276
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
M ++ T+LV YS+ G + AE ++ + + V T+++ Y + G A+ +
Sbjct: 277 MVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFS 336
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEI 153
+ +K DAVA V IL C + +D G+ +
Sbjct: 337 KTRQLCMKIDAVALVGILHGCKKSSHIDIGMSL 369
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 91/210 (43%), Gaps = 8/210 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+++ Y + G + A++ + + +AV L IL C + I LHG++I+
Sbjct: 318 IVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVALVGILHGCKKSSHIDIGMSLHGYAIKSG 377
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ L+ YSK + +F ++ E +++ +++ Q G A ++
Sbjct: 378 LCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRASTAFEVFH 437
Query: 121 S-MLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVA--DML 177
ML G+ PDA+ ++L+ CS ++ G E+ ++ + E++ C A DM
Sbjct: 438 QMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELHGYTLRNNF---ENENFVCTALIDMY 494
Query: 178 GRVGRVVEAYEFVKQLGEDGNVMEIWGSIL 207
+ G V+A K + W S++
Sbjct: 495 AKCGNEVQAESVFKSI--KAPCTATWNSMI 522
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/278 (34%), Positives = 160/278 (57%), Gaps = 8/278 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++ GY QNG +EKAI RE + K + ++L AC+ ++ ++HG +R
Sbjct: 337 LLGGYCQNGEHEKAIEIFRE-MEEK---DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRG 392
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
NV +AL+D Y KSG I A V+++M +N +T+ M+ + Q+G G A++ ++
Sbjct: 393 CFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMITWNAMLSALAQNGRGEEAVSFFN 452
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M++ GIKPD ++F+AIL+AC + G+VDEG F M K + IKP TEHY C+ D+LGR
Sbjct: 453 DMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRA 512
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGAC-KNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G EA +++ E N +WG +LG C N + + +A++++ +E + ++ +
Sbjct: 513 GLFEEAENLLER-AECRNDASLWGVLLGPCAANADASRVAERIAKRMMELEPKYHMS--Y 569
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVE 277
VLLSN+Y G + +R + +G+ K +G S ++
Sbjct: 570 VLLSNMYKAIGRHGDALNIRKLMVRRGVAKTVGQSWID 607
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 101/214 (47%), Gaps = 5/214 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M++GY + KA+ E + + N TLSS + ACS G + HG I H
Sbjct: 134 MMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCFHGVVITHG 193
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ N + + L Y + A VF+ MPE + + +T ++ ++ ++ + AL L+
Sbjct: 194 FEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLYEEALGLFY 253
Query: 121 SMLR-SGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
+M R G+ PD F +L+AC + +G EI ++ + I + + DM G+
Sbjct: 254 AMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLI-TNGIGSNVVVESSLLDMYGK 312
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGA-CKN 212
G V EA + + + +V W ++LG C+N
Sbjct: 313 CGSVREARQVFNGMSKKNSVS--WSALLGGYCQN 344
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 87/162 (53%), Gaps = 9/162 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK---VIPNAVTLSSILPACSSTGSIAFATQLHGFSI 57
+++ +++N L E+A L L A+ H+ ++P+ T ++L AC + + ++HG I
Sbjct: 235 VLSAFSKNDLYEEA-LGLFYAM-HRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLI 292
Query: 58 RHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
+ + NV ++L+D Y K G++ A VFN M +KNSV+++ ++ Y Q+G +A+
Sbjct: 293 TNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIE 352
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
++ M + D F +L AC+ V G EI V+
Sbjct: 353 IFREME----EKDLYCFGTVLKACAGLAAVRLGKEIHGQYVR 390
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/307 (32%), Positives = 161/307 (52%), Gaps = 11/307 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI Y+QNG + +A E V P+A TLS++L AC S G++ Q+ +
Sbjct: 305 MITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELS 364
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ N+Y T LVD Y K G + A VF MP KN T+ M+ +Y G + AL L+D
Sbjct: 365 LQHNIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFD 424
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M + P + F+ +LSAC +AGLV +G F M + + P EHY + D+L R
Sbjct: 425 RM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRA 481
Query: 181 GRVVEAYEFVKQL-GEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G + EA+EF+++ G+ +M +ILGAC + + L+ M+ E + AG +
Sbjct: 482 GMLDEAWEFMERFPGKPDEIM--LAAILGACHKRKDVAIREKAMRMLMEMK-EAKNAGNY 538
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDE----KHPQS 295
V+ SN+ A+ W+ ++R + ++G+ K GCS +EI G + F++ + S
Sbjct: 539 VISSNVLADMKMWDESAKMRALMRDRGVVKTPGCSWIEIEGELMEFLAGSDYLQCGREDS 598
Query: 296 GEIYDIL 302
G ++D+L
Sbjct: 599 GSLFDLL 605
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 106/219 (48%), Gaps = 11/219 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GY++ G + A+ R+ P+ TL S+L ACS G + L +I
Sbjct: 204 MISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKK 263
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + + G+ L+ Y K G + A VFN+M +K+ V +T M+ Y Q+G A L+
Sbjct: 264 IGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFF 323
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVA----DM 176
M ++G+ PDA +LSAC G ++ G +I + H + S +H VA DM
Sbjct: 324 EMEKTGVSPDAGTLSTVLSACGSVGALELGKQI-----ETHASELSLQHNIYVATGLVDM 378
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGY 215
G+ GRV EA + + W +++ A + G+
Sbjct: 379 YGKCGRVEEALRVFEAMPVKNEA--TWNAMITAYAHQGH 415
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 107/230 (46%), Gaps = 12/230 (5%)
Query: 1 MIAGYTQNGLNEKAILTL-REALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
MI G T + +A L+L R + P+ T + + AC+ I +H +
Sbjct: 102 MIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKV 161
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
++++V+ +L+ Y+K G + YA +F+ + E+++V++ +M+ Y + G + A+ L+
Sbjct: 162 GLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSWNSMISGYSEAGYAKDAMDLF 221
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M G +PD V++L ACS+ G + G + E M KI ST + M G+
Sbjct: 222 RKMEEEGFEPDERTLVSMLGACSHLGDLRTG-RLLEEMAITKKIGLSTFLGSKLISMYGK 280
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG--------YFELGKV 221
G + A Q+ + V W +++ +G +FE+ K
Sbjct: 281 CGDLDSARRVFNQMIKKDRV--AWTAMITVYSQNGKSSEAFKLFFEMEKT 328
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 99/283 (34%), Positives = 157/283 (55%), Gaps = 9/283 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+ +QN + R K+ PN +T +L A + GS ++ Q H IR
Sbjct: 653 VISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSYGMQAHCHLIRRG 709
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVT-YTTMMMSYGQHGMGRRALTLY 119
N + ALVD YS G + VF R NS++ + +++ ++G HGMG +A+ L+
Sbjct: 710 FQANPFVSAALVDMYSSCGMLETGMKVF-RNSGVNSISAWNSVISAHGFHGMGEKAMELF 768
Query: 120 DSML-RSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+ S ++P+ +F+++LSACS++G +DEGL ++ M + +KP TEH + DMLG
Sbjct: 769 KELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKFGVKPVTEHRVWIVDMLG 828
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
R G++ EAYEF+ +GE +WG++L AC HG +LGK VAE L ME + A Y
Sbjct: 829 RAGKLREAYEFITGIGEPQKA-GVWGALLSACNYHGDTKLGKEVAEVLFEMEPDN--ASY 885
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGL 281
++ L+N Y G WE R+R + + L K G S++++ L
Sbjct: 886 YISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYSVIDVRCL 928
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 17/261 (6%)
Query: 29 NAVTLSSILPACSSTGSIAFATQLHGFSIR--HFMDQNVYAGTALVDTYSKSGAISYAEN 86
+ VT S ++ ACSS + LHG I+ + + +V G +++ YSK G AE
Sbjct: 288 DTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYSKCGDTEAAET 347
Query: 87 VFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLR-SGIKPDAVAFVAILSACSYAG 145
VF + ++ ++ ++ + +GM A + + M I+PD V+I S C
Sbjct: 348 VFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSICGDLS 407
Query: 146 LVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGS 205
EG + V++ + E V DM G+ G +A K V W S
Sbjct: 408 FSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVS--WNS 465
Query: 206 ILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEK 265
++ A +G+ K + ++++S + + + LS + A ++ D + I K
Sbjct: 466 MISAFSQNGFTHKAKNLFKEVVSEYSCSKFS-----LSTVLAILTSCDSSDSL---IFGK 517
Query: 266 GLHKEMGCSLVEIGGLVNYFV 286
+H C L ++G L + F+
Sbjct: 518 SVH----CWLQKLGDLTSAFL 534
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 1 MIAGYTQNGLNEKAILTLREAL-LHKVIPNAVTLSSILPACSSTGSIAFATQ---LHGFS 56
++ G+ NG+ E+A L + + K+ P+ T+ SI C G ++F+ + +HG++
Sbjct: 363 ILNGFAANGMFEEAFGILNQMQSVDKIQPDIATVVSITSIC---GDLSFSREGRAVHGYT 419
Query: 57 IRHFMDQNVY-AGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRA 115
+R M +++D Y K G + AE +F ++ V++ +M+ ++ Q+G +A
Sbjct: 420 VRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQNGFTHKA 479
Query: 116 LTLYDSMLR--SGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCV 173
L+ ++ S K +AIL++C + + G + +C
Sbjct: 480 KNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSV----------------HC-- 521
Query: 174 ADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGY 215
L ++G + A+ ++ + E ++ W S++ C + G+
Sbjct: 522 --WLQKLGDLTSAFLRLETMSETRDLTS-WNSVISGCASSGH 560
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%)
Query: 49 ATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQ 108
+ LH +I + + AL++ Y+K +S AE VF M ++ V++ T+M
Sbjct: 207 CSMLHCLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLA 266
Query: 109 HGMGRRALTLYDSMLRSGIKPDAVAFVAILSACS 142
+G R++L + SM SG + D V F ++SACS
Sbjct: 267 NGHPRKSLQYFKSMTGSGQEADTVTFSCVISACS 300
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 90/205 (43%), Gaps = 14/205 (6%)
Query: 33 LSSILPACSSTGSIAFATQ---LHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFN 89
L ++L S++G++ Q HG +I+ + + L+ Y + I A VF
Sbjct: 581 LITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESAVKVFG 640
Query: 90 RMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDE 149
+ + N ++ ++ + Q+ GR L+ ++ ++P+ + FV +LSA + G
Sbjct: 641 LISDPNLCSWNCVISALSQNKAGREVFQLFRNL---KLEPNEITFVGLLSASTQLGSTSY 697
Query: 150 GLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGA 209
G++ +++ + + + DM G + + + G N + W S++ A
Sbjct: 698 GMQAHCHLIR-RGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGV--NSISAWNSVISA 754
Query: 210 CKNHGYFELGKVVAE--KLLSMETE 232
HG+ +G+ E K LS +E
Sbjct: 755 ---HGFHGMGEKAMELFKELSSNSE 776
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 174 bits (441), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 105/318 (33%), Positives = 168/318 (52%), Gaps = 15/318 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALL--HKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
M GY N ++L L A + P+++ + S+L ACS + ++HG S+R
Sbjct: 363 MFLGYL-NLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLR 421
Query: 59 H--FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRAL 116
MD+ + TA VD YSK G + YAE +F+ E+++V Y M+ HG ++
Sbjct: 422 TGILMDKKLV--TAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSF 479
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
++ M G KPD + F+A+LSAC + GLV EG + F+SM++ + I P T HY C+ D+
Sbjct: 480 QHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDL 539
Query: 177 LG---RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEK 233
G R+ + +E E + Q+ +D ++ G+ L AC + EL K V EKLL +E
Sbjct: 540 YGKAYRLDKAIELMEGIDQVEKDAVIL---GAFLNACSWNKNTELVKEVEEKLLVIEGSN 596
Query: 234 RVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHP 293
++ ++N YA G W+ + R+R+Q+ K L GCS I + F S D H
Sbjct: 597 --GSRYIQIANAYASSGRWDEMQRIRHQMRGKELEIFSGCSWANIDKQFHMFTSSDISHY 654
Query: 294 QSGEIYDILDKLTMDIKD 311
++ IY +L +T D+ +
Sbjct: 655 ETEAIYAMLHFVTKDLSE 672
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 99/247 (40%), Gaps = 35/247 (14%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IAGY QNG E+A+ + + + + ++L SS S+ ++H +++
Sbjct: 231 LIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNG 290
Query: 61 MDQNVYAGTALVDTYSKSGAISYAEN-------------------------------VFN 89
N + + +VD Y K G + YAE+ +F+
Sbjct: 291 SYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFD 350
Query: 90 RMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIK-PDAVAFVAILSACSYAGLVD 148
+ EKN V +T M + Y L L + + + PD++ V++L ACS ++
Sbjct: 351 SLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYME 410
Query: 149 EGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILG 208
G EI ++ I + DM + G V A E VM + +++
Sbjct: 411 PGKEIHGHSLRT-GILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVM--YNAMIA 467
Query: 209 ACKNHGY 215
C +HG+
Sbjct: 468 GCAHHGH 474
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 33 LSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMP 92
+SS++ S G + S F+D A A++ Y + G I A +VF R P
Sbjct: 163 VSSLIHMYSKCGKFKEVCNIFNGSCVEFVDS--VARNAMIAAYCREGDIDKALSVFWRNP 220
Query: 93 EKN-SVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGL 151
E N ++++ T++ Y Q+G AL + SM +G+K D +F A+L+ S + G
Sbjct: 221 ELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAVLNVLSSLKSLKIGK 280
Query: 152 EIFESMVK 159
E+ ++K
Sbjct: 281 EVHARVLK 288
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/298 (32%), Positives = 166/298 (55%), Gaps = 3/298 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+ + NG E+A+ + L +V PN+ T SS+L A +S + Q+HG ++
Sbjct: 409 MISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMN 468
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ ++ +LV Y K G + A +F+ + E N V+Y TM+ Y +G G++AL L+
Sbjct: 469 IVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALKLFS 528
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
+ SG +P+ V F+A+LSAC + G VD G + F+SM + I+P +HY C+ D+LGR
Sbjct: 529 MLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRS 588
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + +A + + + +WGS+L A K H +L ++ A+KL+ +E + A +V
Sbjct: 589 GLLDDASNLISTMPCKPHS-GVWGSLLSASKTHLRVDLAELAAKKLIELEPDS--ATPYV 645
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEI 298
+LS +Y+ G+ + DR+ N K + K+ G S + + G V+ F++ DE EI
Sbjct: 646 VLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWIILKGEVHNFLAGDESQLNLEEI 703
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Query: 63 QNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSM 122
+++ + T ++ +S G IS +F MPEK+++T+T M+ ++ +G AL + M
Sbjct: 370 KDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKM 429
Query: 123 LRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGR 182
L+ + P++ F ++LSA + + EGL+I +VK++ + + V+ M + G
Sbjct: 430 LQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVS-MYCKCGN 488
Query: 183 VVEAYEFVKQLGE 195
+AY+ + E
Sbjct: 489 TNDAYKIFSCISE 501
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 74/158 (46%), Gaps = 5/158 (3%)
Query: 1 MIAGYTQNGLNEKAI-LTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
MI GY + G E L LR V N+ TL+ + AC +Q+HG R
Sbjct: 245 MIDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRM 304
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
++ +++ G +L+ YSK G + A+ VF M K+SV++ +++ Q A L+
Sbjct: 305 PLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELF 364
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESM 157
+ M D V++ ++ S G + + +E+F M
Sbjct: 365 EKM----PGKDMVSWTDMIKGFSGKGEISKCVELFGMM 398
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 173 bits (439), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 107/317 (33%), Positives = 174/317 (54%), Gaps = 16/317 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M+ G QNG +E+AIL LR+ + PNA +++ L AC+ S+ +HG+ IR+
Sbjct: 517 MMNGMVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNL 576
Query: 61 MDQN-VYAGTALVDTYSKSGAISYAENVF-----NRMPEKNSVTYTTMMMSYGQHGMGRR 114
+ V T+LVD Y+K G I+ AE VF + +P N+ M+ +Y +G +
Sbjct: 577 QHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSNA-----MISAYALYGNLKE 631
Query: 115 ALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVA 174
A+ LY S+ G+KPD + +LSAC++AG +++ +EIF +V +KP EHY +
Sbjct: 632 AIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSKRSMKPCLEHYGLMV 691
Query: 175 DMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKR 234
D+L G +A ++++ + I S++ +C EL ++ KLL E+E
Sbjct: 692 DLLASAGETEKALRLIEEMPFKPDARMI-QSLVASCNKQRKTELVDYLSRKLL--ESEPE 748
Query: 235 VAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGL--VNYFVSRDEKH 292
+G +V +SN YA EG W+ V ++R + KGL K+ GCS ++I G V+ FV+ D+ H
Sbjct: 749 NSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTH 808
Query: 293 PQSGEIYDILDKLTMDI 309
+ EI +L L D+
Sbjct: 809 TRINEIQMMLALLLYDM 825
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 131/261 (50%), Gaps = 5/261 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+GY Q GL E AI + L K+ + VTL++++ A + T ++ ++ + IRH
Sbjct: 346 IISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHS 405
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ ++ + ++D Y+K G+I A+ VF+ EK+ + + T++ +Y + G+ AL L+
Sbjct: 406 FESDIVLASTVMDMYAKCGSIVDAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFY 465
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M G+ P+ + + I+ + G VDE ++F M + I P+ + + + + +
Sbjct: 466 GMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQM-QSSGIIPNLISWTTMMNGMVQN 524
Query: 181 GRVVEAYEFVKQLGEDG---NVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAG 237
G EA F++++ E G N I + L AC + +G+ + ++ +
Sbjct: 525 GCSEEAILFLRKMQESGLRPNAFSITVA-LSACAHLASLHIGRTIHGYIIRNLQHSSLVS 583
Query: 238 YHVLLSNIYAEEGEWENVDRV 258
L ++YA+ G+ ++V
Sbjct: 584 IETSLVDMYAKCGDINKAEKV 604
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 3/214 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++ GY QNG NE+AI + V P VT+S+ L A ++ G + Q H +I +
Sbjct: 245 LMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNG 304
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
M+ + GT+L++ Y K G I YAE VF+RM EK+ VT+ ++ Y Q G+ A+ +
Sbjct: 305 MELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQ 364
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M +K D V ++SA + + G E+ ++ H + V DM +
Sbjct: 365 LMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIR-HSFESDIVLASTVMDMYAKC 423
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
G +V+A + E ++ W ++L A G
Sbjct: 424 GSIVDAKKVFDSTVEKDLIL--WNTLLAAYAESG 455
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 77/142 (54%)
Query: 9 GLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAG 68
GL E A++ E L +++ P+ + ++ AC + F +HG+ ++ ++ V+
Sbjct: 152 GLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVA 211
Query: 69 TALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIK 128
++L D Y K G + A VF+ +P++N+V + +M+ Y Q+G A+ L+ M + G++
Sbjct: 212 SSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVE 271
Query: 129 PDAVAFVAILSACSYAGLVDEG 150
P V LSA + G V+EG
Sbjct: 272 PTRVTVSTCLSASANMGGVEEG 293
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/278 (32%), Positives = 162/278 (58%), Gaps = 5/278 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+ ++ G + +A+ E + P+ T+ ++LP +S G + +H +
Sbjct: 205 MISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSG 264
Query: 61 MDQN-VYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ ++ + G ALVD Y KSG + A +F +M +N V++ T++ +G G + L+
Sbjct: 265 LFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLF 324
Query: 120 DSMLRSG-IKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
D+M+ G + P+ F+ +L+ CSY G V+ G E+F M++ K++ TEHY + D++
Sbjct: 325 DAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMS 384
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
R GR+ EA++F+K + + N +WGS+L AC++HG +L +V A +L+ +E +G
Sbjct: 385 RSGRITEAFKFLKNMPVNANA-AMWGSLLSACRSHGDVKLAEVAAMELVKIEPGN--SGN 441
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLV 276
+VLLSN+YAEEG W++V++VR + + L K G S +
Sbjct: 442 YVLLSNLYAEEGRWQDVEKVRTLMKKNRLRKSTGQSTI 479
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 32 TLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRM 91
T + +L +CSS + F +HG IR + +V+ Y+ G + A+ VF+ M
Sbjct: 104 TYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGRMGDAQKVFDEM 163
Query: 92 PEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGL 151
E+N V + M+ + G R L L+ M I V++ +++S+ S G E L
Sbjct: 164 SERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSI----VSWNSMISSLSKCGRDREAL 219
Query: 152 EIFESMV 158
E+F M+
Sbjct: 220 ELFCEMI 226
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/279 (34%), Positives = 157/279 (56%), Gaps = 7/279 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKV-IP-NAVTLSSILPACSSTGSIAFATQLHGFSIR 58
M G++QNG + + + +HK+ +P + V+LSS++ AC+S S+ Q+ +
Sbjct: 421 MTNGFSQNGCTVETLEYFHQ--MHKLDLPTDEVSLSSVISACASISSLELGEQVFARATI 478
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+D + ++L+D Y K G + + VF+ M + + V + +M+ Y +G G A+ L
Sbjct: 479 VGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDL 538
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+ M +GI+P + F+ +L+AC+Y GLV+EG ++FESM H P EH+ C+ D+L
Sbjct: 539 FKKMSVAGIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLA 598
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
R G V EA V+++ D + +W SIL C +GY +GK AEK++ +E E VA
Sbjct: 599 RAGYVEEAINLVEEMPFDVD-GSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVA-- 655
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVE 277
+V LS I+A G+WE+ VR + E + K G S +
Sbjct: 656 YVQLSAIFATSGDWESSALVRKLMRENNVTKNPGSSWTD 694
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 105/238 (44%), Gaps = 20/238 (8%)
Query: 36 ILPACSSTGSIAFATQLHGFSIRH-FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK 94
+L +CSS Q +G ++ F+ V L+ YS+SG + A N+F+ MP++
Sbjct: 32 LLQSCSSRNRETLWRQTNGLLLKKGFLSSIVIVANHLLQMYSRSGKMGIARNLFDEMPDR 91
Query: 95 NSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIF 154
N ++ TM+ Y G +L +D M + D ++ ++S + AG + +F
Sbjct: 92 NYFSWNTMIEGYMNSGEKGTSLRFFDMM----PERDGYSWNVVVSGFAKAGELSVARRLF 147
Query: 155 ESMVKIHKIKPSTEHYCCVADMLGRV--GRVVEAYEFVKQLGEDGNVMEIWGSILGACKN 212
+M P + + + G + G EA K+L + + + ++L AC
Sbjct: 148 NAM-------PEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADAITL-TTVLKACAE 199
Query: 213 HGYFELGKVVAEKLL--SMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLH 268
+ GK + ++L +E + ++ + L N+YA+ G+ + QI E H
Sbjct: 200 LEALKCGKQIHAQILIGGVECDSKM---NSSLVNVYAKCGDLRMASYMLEQIREPDDH 254
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 83/185 (44%), Gaps = 32/185 (17%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GY N + +A++ E + ++ ++ TL++++ AC G + Q+H + +
Sbjct: 290 MISGYIANNMKMEALVLFNE-MRNETREDSRTLAAVINACIGLGFLETGKQMHCHACKFG 348
Query: 61 MDQNVYAGTALVDTYSKSGA-------------------------------ISYAENVFN 89
+ ++ + L+D YSK G+ I A+ VF
Sbjct: 349 LIDDIVVASTLLDMYSKCGSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFE 408
Query: 90 RMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDE 149
R+ K+ +++ +M + Q+G L + M + + D V+ +++SAC+ ++
Sbjct: 409 RIENKSLISWNSMTNGFSQNGCTVETLEYFHQMHKLDLPTDEVSLSSVISACASISSLEL 468
Query: 150 GLEIF 154
G ++F
Sbjct: 469 GEQVF 473
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 173 bits (438), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 166/314 (52%), Gaps = 3/314 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI GY N ++ I + L + P+ ++ L +C+S G++ RH
Sbjct: 284 MIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHE 343
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
N++ AL+D Y+K GA++ VF M EK+ V + ++G + + ++
Sbjct: 344 FLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFG 403
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
+ GI PD F+ +L C +AGL+ +GL F ++ ++ +K + EHY C+ D+ GR
Sbjct: 404 QTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRA 463
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + +AY + + N + +WG++L C+ +L + V ++L+++E AG +V
Sbjct: 464 GMLDDAYRLICDMPMRPNAI-VWGALLSGCRLVKDTQLAETVLKELIALEPWN--AGNYV 520
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LSNIY+ G W+ VR+ + +KG+ K G S +E+ G V+ F++ D+ HP S +IY
Sbjct: 521 QLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYA 580
Query: 301 ILDKLTMDIKDAGY 314
L+ L +++ G+
Sbjct: 581 KLEDLGNEMRLMGF 594
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 108/212 (50%), Gaps = 2/212 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+ +GYT +G + +AI ++ + V P++ + +L AC G + + +
Sbjct: 183 LFSGYTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME 242
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
M +N + T LV+ Y+K G + A +VF+ M EK+ VT++TM+ Y + + + L+
Sbjct: 243 MQKNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFL 302
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
ML+ +KPD + V LS+C+ G +D G E S++ H+ + + DM +
Sbjct: 303 QMLQENLKPDQFSIVGFLSSCASLGALDLG-EWGISLIDRHEFLTNLFMANALIDMYAKC 361
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKN 212
G + +E K++ E +++ + +I G KN
Sbjct: 362 GAMARGFEVFKEMKEK-DIVIMNAAISGLAKN 392
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 83/166 (50%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G+ N L + + H + + T +L AC+ S LH ++
Sbjct: 82 LINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCG 141
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ +V A T+L+ YS SG ++ A +F+ +P+++ VT+T + Y G R A+ L+
Sbjct: 142 FNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHREAIDLFK 201
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPS 166
M+ G+KPD+ V +LSAC + G +D G I + M ++ K S
Sbjct: 202 KMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNS 247
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 172 bits (436), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/278 (34%), Positives = 165/278 (59%), Gaps = 5/278 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+GY + G + + L + + N+VTL +I+ AC+++ ++FA+ +H ++
Sbjct: 324 MISGYAETGDCSEVMNLLNQMRKEGIEANSVTLLAIVSACTNSTLLSFASTVHSQILKCG 383
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ G AL+D Y+K G++S A VF + EK+ V++++M+ +YG HG G AL ++
Sbjct: 384 FMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSSMINAYGLHGHGSEALEIFK 443
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M++ G + D +AF+AILSAC++AGLV+E IF K H + + EHY C ++LGR
Sbjct: 444 GMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIFTQAGKYH-MPVTLEHYACYINLLGRF 502
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFEL-GKVVAEKLLSMETEKRVAGYH 239
G++ +A+E + + IW S+L AC+ HG ++ GK++A +L M++E +
Sbjct: 503 GKIDDAFEVTINMPMKPSA-RIWSSLLSACETHGRLDVAGKIIANEL--MKSEPDNPANY 559
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVE 277
VLLS I+ E G + + VR + + L+K G S +E
Sbjct: 560 VLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 14/221 (6%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACS--STGSIAFATQLHGFSIR 58
MI+G N E + R + PN VTL S+LPAC + GS + ++HGFS R
Sbjct: 222 MISGCVANQNYEMGVDLFRAMQRENLRPNRVTLLSVLPACVELNYGS-SLVKEIHGFSFR 280
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
H + A + Y + G +S + +F ++ V +++M+ Y + G + L
Sbjct: 281 HGCHADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNL 340
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVA---- 174
+ M + GI+ ++V +AI+SAC+ + L+ F S V +K + +
Sbjct: 341 LNQMRKEGIEANSVTLLAIVSACTNSTLLS-----FASTVHSQILKCGFMSHILLGNALI 395
Query: 175 DMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGY 215
DM + G + A E +L E V W S++ A HG+
Sbjct: 396 DMYAKCGSLSAAREVFYELTEKDLVS--WSSMINAYGLHGH 434
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIA-FATQLHGFS-IR 58
+I Q+GL +A+ ++E + IP + ++S+L C+ GS + A H +
Sbjct: 119 IINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVD 178
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
M ++V TALVD Y K + A +VF++M KN V++T M+ + + L
Sbjct: 179 ERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDL 238
Query: 119 YDSMLRSGIKPDAVAFVAILSAC 141
+ +M R ++P+ V +++L AC
Sbjct: 239 FRAMQRENLRPNRVTLLSVLPAC 261
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 89/208 (42%), Gaps = 6/208 (2%)
Query: 16 LTLREALLHKVIPNAVT--LSSILPACS-STGSIAFATQLHGFSIRHFMDQNVYAGTALV 72
L L + +H + N T L S++ AC+ QLH ++ D + +L+
Sbjct: 30 LRLYKLKIHSLGTNGFTAILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLI 89
Query: 73 DTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAV 132
Y+K VF+ M +++V+Y +++ S Q G+ A+ L M G P +
Sbjct: 90 SMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSE 149
Query: 133 AFVAILSACSYAGLVDEGLEIFESMVKI-HKIKPSTEHYCCVADMLGRVGRVVEAYEFVK 191
++L+ C+ G + +F ++V + +++ S + DM + A+
Sbjct: 150 LVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFD 209
Query: 192 QLGEDGNVMEIWGSILGACKNHGYFELG 219
Q+ V W +++ C + +E+G
Sbjct: 210 QMEVKNEVS--WTAMISGCVANQNYEMG 235
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 171 bits (434), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 99/303 (32%), Positives = 155/303 (51%), Gaps = 5/303 (1%)
Query: 12 EKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTAL 71
E+AI + K+ P+ T SS+L AC+ + A +H I+ + +L
Sbjct: 351 ERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSL 410
Query: 72 VDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDA 131
+ Y+K G++ VF+ M ++ V++ +M+ +Y HG L ++ M I PD+
Sbjct: 411 IHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKM---DINPDS 467
Query: 132 VAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVK 191
F+A+LSACS+AG V+EGL IF SM + + P HY CV DML R R EA E +K
Sbjct: 468 ATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVIDMLSRAERFAEAEEVIK 527
Query: 192 QLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGE 251
Q+ D + + +W ++LG+C+ HG LGK+ A+KL + Y + +SNIY EG
Sbjct: 528 QMPMDPDAV-VWIALLGSCRKHGNTRLGKLAADKLKELVEPTNSMSY-IQMSNIYNAEGS 585
Query: 252 WENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYDILDKLTMDIKD 311
+ + ++ + KE S EIG V+ F S P +Y L +L +K+
Sbjct: 586 FNEANLSIKEMETWRVRKEPDLSWTEIGNKVHEFASGGRHRPDKEAVYRELKRLISWLKE 645
Query: 312 AGY 314
GY
Sbjct: 646 MGY 648
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 34 SSILPACSSTGSIAFATQLHGFSIRH--FMDQNVYAGTALVDTYSKSGAISYAENVFNRM 91
+++ AC+ ++ LH + H QNV L++ Y+K G I YA VF+ M
Sbjct: 63 AALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILANFLINMYAKCGNILYARQVFDTM 122
Query: 92 PEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSY 143
PE+N V++T ++ Y Q G + L+ SML S P+ ++L++C Y
Sbjct: 123 PERNVVSWTALITGYVQAGNEQEGFCLFSSML-SHCFPNEFTLSSVLTSCRY 173
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 73/143 (51%), Gaps = 8/143 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GY Q G NE+ L ++L PN TLSS+L +C Q+HG +++
Sbjct: 133 LITGYVQAG-NEQEGFCLFSSMLSHCFPNEFTLSSVLTSCRYEP----GKQVHGLALKLG 187
Query: 61 MDQNVYAGTALVDTYSK--SGAISY-AENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
+ ++Y A++ Y + GA +Y A VF + KN VT+ +M+ ++ +G++A+
Sbjct: 188 LHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIG 247
Query: 118 LYDSMLRSGIKPDAVAFVAILSA 140
++ M G+ D + I S+
Sbjct: 248 VFMRMHSDGVGFDRATLLNICSS 270
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 171 bits (433), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 169/313 (53%), Gaps = 18/313 (5%)
Query: 1 MIAGYTQNGLNEKAILT----LREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFS 56
+I G++Q G NE+A+ T LRE + VIPN T + A S+ S +H +
Sbjct: 196 VIGGFSQTGRNEEAVNTFVDMLREGV---VIPNESTFPCAITAISNIASHGAGKSIHACA 252
Query: 57 IRHFMDQ-NVYAGTALVDTYSKSGAISYAENVFNRMPE--KNSVTYTTMMMSYGQHGMGR 113
I+ + NV+ +L+ YSK G + + FN++ E +N V++ +M+ Y +G G
Sbjct: 253 IKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGE 312
Query: 114 RALTLYDSMLR-SGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPST---EH 169
A+ +++ M++ + ++P+ V + +L AC++AGL+ EG F V + P+ EH
Sbjct: 313 EAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAVNDYD-DPNLLELEH 371
Query: 170 YCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSM 229
Y C+ DML R GR EA E +K + D + W ++LG C+ H L K+ A K+L
Sbjct: 372 YACMVDMLSRSGRFKEAEELIKSMPLDPGI-GFWKALLGGCQIHSNKRLAKLAASKIL-- 428
Query: 230 ETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRD 289
E + R +V+LSN Y+ W+NV +R ++ E GL + GCS +E+ + FV+ D
Sbjct: 429 ELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWIEVRDQIRVFVNAD 488
Query: 290 EKHPQSGEIYDIL 302
+ + E+Y +L
Sbjct: 489 KNNELKDEVYRML 501
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/258 (20%), Positives = 116/258 (44%), Gaps = 14/258 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I + + + +A + L + PN T +++ + +++ + QLH ++++
Sbjct: 64 VIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCYALKMG 123
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ NV+ G+A+++ Y K ++ A F+ + N V+ T ++ Y + AL+L+
Sbjct: 124 LASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEALSLFR 183
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
+M + V + A++ S G +E + F M++ + P+ + C + +
Sbjct: 184 AMPERSV----VTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISNI 239
Query: 181 -----GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRV 235
G+ + A +K LG+ NV +W S++ G E + KL E ++ +
Sbjct: 240 ASHGAGKSIHACA-IKFLGKRFNVF-VWNSLISFYSKCGNMEDSLLAFNKL--EEEQRNI 295
Query: 236 AGYHVLLSNIYAEEGEWE 253
++ ++ YA G E
Sbjct: 296 VSWNSMIWG-YAHNGRGE 312
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 171 bits (432), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 85/239 (35%), Positives = 144/239 (60%), Gaps = 4/239 (1%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
P+ TL S+L AC+S GS++ +H + +H ++ + TALVD YSK G I A V
Sbjct: 302 PDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEV 361
Query: 88 FNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLV 147
F +++ T+ +++ HG+G+ AL ++ M+ G KP+ + F+ +LSAC++ G++
Sbjct: 362 FRATSKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGML 421
Query: 148 DEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSIL 207
D+ ++FE M +++++P+ EHY C+ D+LGR+G++ EA E V ++ D + + S+L
Sbjct: 422 DQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASI-LLESLL 480
Query: 208 GACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENV-DRVRNQITEK 265
GACK G E + +A +LL E R + + +SN+YA +G WE V D RN E+
Sbjct: 481 GACKRFGQLEQAERIANRLL--ELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAER 537
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 109/227 (48%), Gaps = 16/227 (7%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I Y + E A+ RE LL V P+ + + +L AC++ Q+HG I+
Sbjct: 111 VIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSG 170
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ +V+ LV+ Y +SG A V +RMP +++V++ +++ +Y + G+ A L+D
Sbjct: 171 LVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFD 230
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESM-----VKIHKIKPSTEHYCCVAD 175
M ++ ++ ++S + AGLV E E+F+SM V + + + H C +
Sbjct: 231 EMEERNVE----SWNFMISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNE 286
Query: 176 MLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVV 222
+L ++++ DG + S+L AC + G G+ V
Sbjct: 287 VLEVFNKMLDD----STEKPDGFTLV---SVLSACASLGSLSQGEWV 326
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 94/203 (46%), Gaps = 11/203 (5%)
Query: 19 REALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKS 78
R+ L + +AV+ +S+L A G + A L ++NV + ++ Y+ +
Sbjct: 195 RKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARAL----FDEMEERNVESWNFMISGYAAA 250
Query: 79 GAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGI-KPDAVAFVAI 137
G + A+ VF+ MP ++ V++ M+ +Y G L +++ ML KPD V++
Sbjct: 251 GLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSV 310
Query: 138 LSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDG 197
LSAC+ G + +G E + H I+ + DM + G++ +A E + +
Sbjct: 311 LSACASLGSLSQG-EWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRD 369
Query: 198 NVMEIWGSILGACKNHGYFELGK 220
+ W SI+ HG LGK
Sbjct: 370 --VSTWNSIISDLSVHG---LGK 387
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 21/241 (8%)
Query: 18 LREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVD---T 74
L++ L K+ + T IL S+ Q H F ++ + + ++ + LV T
Sbjct: 24 LQKENLKKMSVCSSTPVPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAAT 83
Query: 75 YSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAF 134
+ +SYA ++ NR+ N T+ +++ +Y ALT++ ML + PD +F
Sbjct: 84 NPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSF 143
Query: 135 VAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYC--CVADMLGRVGRVVEAYEFVKQ 192
+L AC+ +EG +I +K + T+ + + ++ GR G +E ++
Sbjct: 144 TFVLKACAAFCGFEEGRQIHGLFIKSGLV---TDVFVENTLVNVYGRSGY----FEIARK 196
Query: 193 LGEDGNVMEI--WGSILGACKNHGYFELGKVVAEKLLSMETEKR-VAGYHVLLSNIYAEE 249
+ + V + W S+L A Y E G V + L E E+R V ++ ++S YA
Sbjct: 197 VLDRMPVRDAVSWNSLLSA-----YLEKGLVDEARALFDEMEERNVESWNFMISG-YAAA 250
Query: 250 G 250
G
Sbjct: 251 G 251
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 168 bits (426), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 174/313 (55%), Gaps = 17/313 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH- 59
MI+ YT+N + +AI + K+ + V ++ L AC+ G++ +++ SI+
Sbjct: 138 MISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRK 197
Query: 60 -FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+ ++ +L++ Y KSG A +F+ K+ TYT+M+ Y +G + +L L
Sbjct: 198 RRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLEL 257
Query: 119 YDSM------LRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCC 172
+ M + I P+ V F+ +L ACS++GLV+EG F+SM+ + +KP H+ C
Sbjct: 258 FKKMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGC 317
Query: 173 VADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETE 232
+ D+ R G + +A+EF+ Q+ N + IW ++LGAC HG ELG+ V ++ ++ +
Sbjct: 318 MVDLFCRSGHLKDAHEFINQMPIKPNTV-IWRTLLGACSLHGNVELGEEVQRRIFELDRD 376
Query: 233 KRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKH 292
G +V LSNIYA +G W+ ++R+++ ++ + G S +E+G ++N FVS + +
Sbjct: 377 H--VGDYVALSNIYASKGMWDEKSKMRDRVRKRRMP---GKSWIELGSIINEFVSGPDNN 431
Query: 293 PQS---GEIYDIL 302
+ GEI ++L
Sbjct: 432 DEQLMMGEISEVL 444
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 7/160 (4%)
Query: 5 YTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFAT----QLHGFSIRHF 60
Y ++G KA+L R P+ V S+L A + + ++ Q+H +
Sbjct: 38 YLESGEPIKALLDFRHRFRQS--PSFVDSFSVLFAIKVSSAQKASSLDGRQIHALVRKLG 95
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK-NSVTYTTMMMSYGQHGMGRRALTLY 119
+ + T+LV YS G + YA VF+ PEK N V +T M+ +Y ++ A+ L+
Sbjct: 96 FNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIELF 155
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
M I+ D V LSAC+ G V G EI+ +K
Sbjct: 156 KRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIK 195
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/252 (37%), Positives = 143/252 (56%), Gaps = 5/252 (1%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
P+ L+S+L AC+S G++ +H + + + + + GTA+VD Y+K G I A +
Sbjct: 304 PDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEI 363
Query: 88 FNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLV 147
FN + KN T+ ++ HG G +L ++ M++ G KP+ V F+A L+AC + GLV
Sbjct: 364 FNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLV 423
Query: 148 DEGLEIFESM-VKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSI 206
DEG F M + + + P EHY C+ D+L R G + EA E VK + +V I G+I
Sbjct: 424 DEGRRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDV-RICGAI 482
Query: 207 LGACKNHG-YFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEK 265
L ACKN G EL K + + L +E E +G +VLLSNI+A W++V R+R + K
Sbjct: 483 LSACKNRGTLMELPKEILDSFLDIEFED--SGVYVLLSNIFAANRRWDDVARIRRLMKVK 540
Query: 266 GLHKEMGCSLVE 277
G+ K G S +E
Sbjct: 541 GISKVPGSSYIE 552
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 102/216 (47%), Gaps = 7/216 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G+T+ GL ++A+ T + V PN T +L + G ++ +HG ++
Sbjct: 178 IITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRA 234
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ G AL+D Y K +S A VF + +K+ V++ +M+ + A+ L+
Sbjct: 235 SLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFS 294
Query: 121 SM-LRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M SGIKPD ++LSAC+ G VD G + E ++ IK T + DM +
Sbjct: 295 LMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILT-AGIKWDTHIGTAIVDMYAK 353
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGY 215
G + A E + NV W ++LG HG+
Sbjct: 354 CGYIETALEIFNGI-RSKNVFT-WNALLGGLAIHGH 387
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
P+ T + AC I Q+HG + ++Y +LV Y G A V
Sbjct: 104 PDMFTFPPVFKACGKFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKV 163
Query: 88 FNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLV 147
F MP ++ V++T ++ + + G+ + AL + M ++P+ +V +L + G +
Sbjct: 164 FGEMPVRDVVSWTGIITGFTRTGLYKEALDTFSKM---DVEPNLATYVCVLVSSGRVGCL 220
Query: 148 DEG 150
G
Sbjct: 221 SLG 223
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 161/279 (57%), Gaps = 5/279 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+G+ N +E+ L+E LL PN +TL+SILP + G++ + H + +R
Sbjct: 394 IISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 61 MDQN-VYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
++ + +LVD Y+KSG I A+ VF+ M +++ VTYT+++ YG+ G G AL +
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWF 513
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M RSGIKPD V VA+LSACS++ LV EG +F M + I+ EHY C+ D+ R
Sbjct: 514 KDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCR 573
Query: 180 VGRVVEAYEFVKQLG-EDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
G + +A + + E + M ++L AC HG +G+ A+KLL +ET+ G+
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAM--CATLLKACLIHGNTNIGEWAADKLL-LETKPEHLGH 630
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVE 277
++LL+++YA G W + V+ +++ G+ K +L+E
Sbjct: 631 YMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALME 669
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 66/145 (45%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I Y +N ++++ + + + + T S++ AC++ A+ +HG
Sbjct: 155 LIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSS 214
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
N+Y AL+ Y + G + A +F+RM E+++V++ ++ Y A L D
Sbjct: 215 HRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLD 274
Query: 121 SMLRSGIKPDAVAFVAILSACSYAG 145
M SG++ V + I C AG
Sbjct: 275 RMYLSGVEASIVTWNTIAGGCLEAG 299
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/279 (35%), Positives = 161/279 (57%), Gaps = 5/279 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+G+ N +E+ L+E LL PN +TL+SILP + G++ + H + +R
Sbjct: 394 IISGFAYNERSEETSFLLKEMLLSGFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQ 453
Query: 61 MDQN-VYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
++ + +LVD Y+KSG I A+ VF+ M +++ VTYT+++ YG+ G G AL +
Sbjct: 454 SYKDCLILWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWF 513
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M RSGIKPD V VA+LSACS++ LV EG +F M + I+ EHY C+ D+ R
Sbjct: 514 KDMDRSGIKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCR 573
Query: 180 VGRVVEAYEFVKQLG-EDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
G + +A + + E + M ++L AC HG +G+ A+KLL +ET+ G+
Sbjct: 574 AGYLDKARDIFHTIPYEPSSAM--CATLLKACLIHGNTNIGEWAADKLL-LETKPEHLGH 630
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVE 277
++LL+++YA G W + V+ +++ G+ K +L+E
Sbjct: 631 YMLLADMYAVTGSWSKLVTVKTLLSDLGVQKAHEFALME 669
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 66/145 (45%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I Y +N ++++ + + + + T S++ AC++ A+ +HG
Sbjct: 155 LIGSYIRNKRFQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSS 214
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
N+Y AL+ Y + G + A +F+RM E+++V++ ++ Y A L D
Sbjct: 215 HRCNLYVCNALISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLD 274
Query: 121 SMLRSGIKPDAVAFVAILSACSYAG 145
M SG++ V + I C AG
Sbjct: 275 RMYLSGVEASIVTWNTIAGGCLEAG 299
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 167 bits (422), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/280 (33%), Positives = 151/280 (53%), Gaps = 8/280 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GY+QNG E+A+ + L + P+ VT S++ A G +H + +
Sbjct: 288 IITGYSQNGDAEEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTG 347
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ ALV+ Y+K+G A+ F + +K+++ +T +++ HG G AL+++
Sbjct: 348 FVKDAAIVCALVNMYAKTGDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQ 407
Query: 121 SMLRSG-IKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M G PD + ++ +L ACS+ GLV+EG F M +H ++P+ EHY C+ D+L R
Sbjct: 408 RMQEKGNATPDGITYLGVLYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSR 467
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSM--ETEKRVAG 237
GR EA VK + NV IWG++L C H EL +++ SM E E+ +G
Sbjct: 468 AGRFEEAERLVKTMPVKPNV-NIWGALLNGCDIHENLEL----TDRIRSMVAEPEELGSG 522
Query: 238 YHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVE 277
+VLLSNIYA+ G W +V +R + K + K +G S VE
Sbjct: 523 IYVLLSNIYAKAGRWADVKLIRESMKSKRVDKVLGHSSVE 562
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 11/223 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+G+ N AI RE + V N + +L AC I HGF
Sbjct: 179 LISGFVNNNRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLG 238
Query: 61 MDQ--------NVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMG 112
D NV T+L+D Y+K G + A +F+ MPE+ V++ +++ Y Q+G
Sbjct: 239 FDPYFQSKVGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDA 298
Query: 113 RRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCC 172
AL ++ ML GI PD V F++++ A G G I + K +K + C
Sbjct: 299 EEALCMFLDMLDLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAA-IVCA 357
Query: 173 VADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGY 215
+ +M + G A + + L + + W ++ +HG+
Sbjct: 358 LVNMYAKTGDAESAKKAFEDLEKKDTIA--WTVVIIGLASHGH 398
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 70/141 (49%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI GY+ + +KA++ +E L P+ T +L ACS I F + +HGF ++
Sbjct: 78 MIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSCVHGFVVKTG 137
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ N+Y T L+ Y G ++Y VF +P+ N V + +++ + + A+ +
Sbjct: 138 FEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNNNRFSDAIEAFR 197
Query: 121 SMLRSGIKPDAVAFVAILSAC 141
M +G+K + V +L AC
Sbjct: 198 EMQSNGVKANETIMVDLLVAC 218
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 83/197 (42%), Gaps = 32/197 (16%)
Query: 36 ILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVD---TYSKSGAISYAENVFNRMP 92
IL + S+ QLHG I+ + +NV + L+D T ++ +SYA +VF +
Sbjct: 9 ILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFESID 68
Query: 93 EKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACS---------- 142
+ + +M+ Y +AL Y MLR G PD F +L ACS
Sbjct: 69 CPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFGSC 128
Query: 143 -YAGLVDEGLEI--FESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNV 199
+ +V G E+ + S +H + CC G V + +E + Q NV
Sbjct: 129 VHGFVVKTGFEVNMYVSTCLLHM------YMCC-----GEVNYGLRVFEDIPQW----NV 173
Query: 200 MEIWGSILGACKNHGYF 216
+ WGS++ N+ F
Sbjct: 174 VA-WGSLISGFVNNNRF 189
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 166 bits (419), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 98/281 (34%), Positives = 158/281 (56%), Gaps = 8/281 (2%)
Query: 1 MIAGYTQNGLNEKAILTL-REALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGF-SIR 58
+I GY + ++AIL R + PN +T+ +ILPA + G + +H + R
Sbjct: 226 IIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKR 285
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMP--EKNSVTYTTMMMSYGQHGMGRRAL 116
F+ ++ +L+D Y+K G I A F +P KN V++TTM+ ++ HGMG+ A+
Sbjct: 286 GFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAV 345
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEG-LEIFESMVKIHKIKPSTEHYCCVAD 175
+++ M R G+KP+ V +++L+ACS+ GL +E LE F +MV +KI P +HY C+ D
Sbjct: 346 SMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVD 405
Query: 176 MLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRV 235
ML R GR+ EA + ++ + + +W +LGAC + EL + V KL ME E+
Sbjct: 406 MLRRKGRLEEAEKIALEIPIEEKAV-VWRMLLGACSVYDDAELAERVTRKL--MELERSH 462
Query: 236 AGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLV 276
G +VL+SNI+ G + + R R Q+ +G+ K G S V
Sbjct: 463 GGDYVLMSNIFCGTGRFLDAQRFRKQMDVRGVAKLPGHSQV 503
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 4/106 (3%)
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ +VY TALV Y G + A VF+ MPE+N VT+ M+ G +AL +
Sbjct: 154 FESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLE 213
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPS 166
M + V++ I+ + E + +F MV IKP+
Sbjct: 214 KMPNRTV----VSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPN 255
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 165 bits (417), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/266 (32%), Positives = 154/266 (57%), Gaps = 6/266 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GY++ G +++A+ E + P+ V ++ +L +C+ ++H + IR
Sbjct: 279 LITGYSRCGNHKEALHLFAELRMSGKKPDCVLVAIVLGSCAELSDSVSGKEVHSYVIRLG 338
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ ++ +AL+D YSK G + A ++F +PEKN V++ ++++ G HG A +
Sbjct: 339 LELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFNSLILGLGLHGFASTAFEKFT 398
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
+L G+ PD + F A+L C ++GL+++G EIFE M I+P TEHY + ++G
Sbjct: 399 EILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSEFGIEPQTEHYVYMVKLMGMA 458
Query: 181 GRVVEAYEFVKQLGE--DGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
G++ EA+EFV L + D ++ G++L C+ H L +VVAE + E+R + Y
Sbjct: 459 GKLEEAFEFVMSLQKPIDSGIL---GALLSCCEVHENTHLAEVVAEN-IHKNGEERRSVY 514
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITE 264
V+LSN+YA G W+ V+R+R+ I+E
Sbjct: 515 KVMLSNVYARYGRWDEVERLRDGISE 540
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 72/144 (50%), Gaps = 4/144 (2%)
Query: 1 MIAGYTQNGLNEKAI--LTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
MI GY G +K I L + H+ PN T+ ++ + A +H F ++
Sbjct: 178 MILGYGCCGFWDKGINLFNLMQHRGHQ--PNCYTMVALTSGLIDPSLLLVAWSVHAFCLK 235
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
+D + Y G ALV+ YS+ I+ A +VFN + E + V ++++ Y + G + AL L
Sbjct: 236 INLDSHSYVGCALVNMYSRCMCIASACSVFNSISEPDLVACSSLITGYSRCGNHKEALHL 295
Query: 119 YDSMLRSGIKPDAVAFVAILSACS 142
+ + SG KPD V +L +C+
Sbjct: 296 FAELRMSGKKPDCVLVAIVLGSCA 319
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 76/166 (45%), Gaps = 14/166 (8%)
Query: 39 ACSSTG-SIAFATQ----LHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPE 93
AC + G S +F T+ +HG +I + + G+A+V YSK+G I A +F +P+
Sbjct: 110 ACLARGFSESFDTKGLRCIHGIAIVSGLGFDQICGSAIVKAYSKAGLIVEASKLFCSIPD 169
Query: 94 KNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEI 153
+ + M++ YG G + + L++ M G +P+ VA+ S GL+D L +
Sbjct: 170 PDLALWNVMILGYGCCGFWDKGINLFNLMQHRGHQPNCYTMVALTS-----GLIDPSLLL 224
Query: 154 FESMVKIHKIKPSTEHY----CCVADMLGRVGRVVEAYEFVKQLGE 195
V +K + + + C + +M R + A + E
Sbjct: 225 VAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIASACSVFNSISE 270
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 165/311 (53%), Gaps = 5/311 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI G+++ G +E A+ E K + +LSS++ ACS + H +IR
Sbjct: 474 MIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTG 533
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
D + ALVD Y K+G AE +F+ + + +M+ +Y QHGM +AL+ ++
Sbjct: 534 FDCVMSVCGALVDMYGKNGKYETAETIFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFE 593
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
+L +G PDAV ++++L+ACS+ G +G ++ M K IK +HY C+ +++ +
Sbjct: 594 QILENGFMPDAVTYLSLLAACSHRGSTLQGKFLWNQM-KEQGIKAGFKHYSCMVNLVSKA 652
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G V EA E ++Q N E+W ++L AC N ++G AE++L ++ E H+
Sbjct: 653 GLVDEALELIEQSPPGNNQAELWRTLLSACVNTRNLQIGLYAAEQILKLDPED--TATHI 710
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEI-GGLVNYFVSRDEKHPQ-SGEI 298
LLSN+YA G WE+V +R +I K+ G S +E+ F S D+ +P+ +
Sbjct: 711 LLSNLYAVNGRWEDVAEMRRKIRGLASSKDPGLSWIEVNNNNTQVFSSGDQSNPEVVSQA 770
Query: 299 YDILDKLTMDI 309
D L++L ++
Sbjct: 771 QDELNRLKRNM 781
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 139/305 (45%), Gaps = 22/305 (7%)
Query: 1 MIAGYTQNGLNEKAILTLREAL-LHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+I+G ++NG E+A+L R L + P+ T S+ + A + LHG +
Sbjct: 372 IISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKL 431
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+++V+ GT L+ Y K+ A+ VF+ M E++ V +T M++ + + G A+ +
Sbjct: 432 GYERSVFVGTTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFF 491
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVA----- 174
M R + D + +++ ACS ++ +G E+F H + T C ++
Sbjct: 492 IEMYREKNRSDGFSLSSVIGACSDMAMLRQG-EVF------HCLAIRTGFDCVMSVCGAL 544
Query: 175 -DMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEK 233
DM G+ G+ E E + L + + ++ W S+LGA HG E E++L
Sbjct: 545 VDMYGKNGK-YETAETIFSLASNPD-LKCWNSMLGAYSQHGMVEKALSFFEQILENGFMP 602
Query: 234 RVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLH---KEMGC--SLVEIGGLVNYFVSR 288
Y LL+ + G + NQ+ E+G+ K C +LV GLV+ +
Sbjct: 603 DAVTYLSLLAAC-SHRGSTLQGKFLWNQMKEQGIKAGFKHYSCMVNLVSKAGLVDEALEL 661
Query: 289 DEKHP 293
E+ P
Sbjct: 662 IEQSP 666
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/285 (21%), Positives = 129/285 (45%), Gaps = 24/285 (8%)
Query: 26 VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAE 85
V PN+ T +S++ C+ + + L+ I+ NV T+++ YS G + A
Sbjct: 195 VKPNSSTFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESAR 254
Query: 86 NVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAG 145
+F+ + +++V + TM++ ++ L + +ML SG+ P + +L+ CS G
Sbjct: 255 RIFDCVNNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLG 314
Query: 146 ------LVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNV 199
L+ + + +S+ + + YC DM EA+ ++ + N+
Sbjct: 315 SYSLGKLIHARIIVSDSLADLPLDNALLDMYCSCGDMR-------EAFYVFGRI-HNPNL 366
Query: 200 MEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVR 259
+ W SI+ C +G+ E ++ +LL M T + + AE + + +
Sbjct: 367 VS-WNSIISGCSENGFGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLH 425
Query: 260 NQITEKGLHKE--MGCSLVEIGGLVNYFVSRDEKHPQSGEIYDIL 302
Q+T+ G + +G +L+ + YF +R+ + Q +++D++
Sbjct: 426 GQVTKLGYERSVFVGTTLLSM-----YFKNREAESAQ--KVFDVM 463
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 164 bits (415), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 96/302 (31%), Positives = 169/302 (55%), Gaps = 5/302 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR-- 58
MI+G QN L +A L + + + P T S +L + +T ++ +H +
Sbjct: 437 MISGLVQNELFAEAASLLSDMVRCGLKPLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTT 496
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
D ++ +LV Y+K GAI A +F +M +K++V++ +M+M HG+ +AL L
Sbjct: 497 ACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKDTVSWNSMIMGLSHHGLADKALNL 556
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+ ML SG KP++V F+ +LSACS++GL+ GLE+F++M + + I+P +HY + D+LG
Sbjct: 557 FKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFKAMKETYSIQPGIDHYISMIDLLG 616
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEK--LLSMETEKRVA 236
R G++ EA EF+ L + ++G++LG C + + + +AE+ + +E + A
Sbjct: 617 RAGKLKEAEEFISALPFTPD-HTVYGALLGLCGLNWRDKDAEGIAERAAMRLLELDPVNA 675
Query: 237 GYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSG 296
HV L N+YA G + +R ++ KG+ K GCS V + G N F+S D+ ++
Sbjct: 676 PGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCSWVVVNGRANVFLSGDKSASEAA 735
Query: 297 EI 298
++
Sbjct: 736 QM 737
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 69 TALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIK 128
T+++D Y ++G +S A +F ++ +K+ VT+T M+ Q+ + A +L M+R G+K
Sbjct: 404 TSMIDGYLEAGDVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMVRCGLK 463
Query: 129 PDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKI-KPSTEHYCCVADMLGRVGRVVEAY 187
P + +LS+ +D+G I + K P + M + G + +AY
Sbjct: 464 PLNSTYSVLLSSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAY 523
Query: 188 EFVKQLGEDGNVMEIWGSILGACKNHG 214
E ++ + V W S++ +HG
Sbjct: 524 EIFAKMVQKDTVS--WNSMIMGLSHHG 548
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIP--NAVTLSSILPACSSTGSIAFATQLHGFSIR 58
M+ +G +E A+ E +P N V+ ++++ G + A Q+
Sbjct: 144 MLTALCDDGRSEDAVELFDE------MPERNVVSWNTLVTGLIRNGDMEKAKQV----FD 193
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
++V + A++ Y ++ + A+ +F M EKN VT+T+M+ Y ++G R A L
Sbjct: 194 AMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRL 253
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK-IHKIKPSTEHYCCVADML 177
+ M I V++ A++S ++ L E L +F M K + + P+ E +A
Sbjct: 254 FCEMPERNI----VSWTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYAC 309
Query: 178 GRVGRVVEAYEFVKQLGE 195
G +G EF ++LGE
Sbjct: 310 GGLG-----VEF-RRLGE 321
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 147/280 (52%), Gaps = 6/280 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+GY Q +AI E + + P+ V + S L AC+ +G +H ++ R
Sbjct: 220 LISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKR 279
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + + T LVD Y+K G I A +F +K T+ M+ HG G + +
Sbjct: 280 LFIDSFLATGLVDFYAKCGFIDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFR 339
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+ SGIKPD V F+++L CS++GLVDE +F+ M ++ + +HY C+AD+LGR
Sbjct: 340 KMVSSGIKPDGVTFISVLVGCSHSGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRA 399
Query: 181 GRVVEAYEFVKQLGEDGNVME---IWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAG 237
G + EA E ++Q+ +DG E W +LG C+ HG E+ + A ++ ++ E G
Sbjct: 400 GLIEEAAEMIEQMPKDGGNREKLLAWSGLLGGCRIHGNIEIAEKAANRVKALSPED--GG 457
Query: 238 YHVLLSNIYAEEGEWENVDRVRNQIT-EKGLHKEMGCSLV 276
+ ++ +YA WE V +VR I +K + K +G S V
Sbjct: 458 VYKVMVEMYANAERWEEVVKVREIIDRDKKVKKNVGFSKV 497
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 100/209 (47%), Gaps = 7/209 (3%)
Query: 20 EALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSG 79
+AL ++ + TL++++ S I A QL + + ++V L+D K+
Sbjct: 142 QALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQ----RDVVTYNVLIDGLVKAR 197
Query: 80 AISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILS 139
I A +F+ MP ++ V++ +++ Y Q R A+ L+D M+ G+KPD VA V+ LS
Sbjct: 198 EIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMVALGLKPDNVAIVSTLS 257
Query: 140 ACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNV 199
AC+ +G +G I + K ++ + + D + G + A E + +L D +
Sbjct: 258 ACAQSGDWQKGKAIHD-YTKRKRLFIDSFLATGLVDFYAKCGFIDTAME-IFELCSDKTL 315
Query: 200 MEIWGSILGACKNHGYFELGKVVAEKLLS 228
W +++ HG EL K++S
Sbjct: 316 FT-WNAMITGLAMHGNGELTVDYFRKMVS 343
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 154/280 (55%), Gaps = 11/280 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+G +N ++A L L+ + PN LSS L CS + Q+H ++R+
Sbjct: 257 LISGCIRNRNYKEAFL-----LMSRQRPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNG 311
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ L+D Y K G I A +F +P K+ V++T+M+ +Y +G G +AL ++
Sbjct: 312 FVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFR 371
Query: 121 SMLR--SGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
M SG+ P++V F+ ++SAC++AGLV EG E F M + +++ P TEHY C D+L
Sbjct: 372 EMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILS 431
Query: 179 RVGRVVEAYEFVKQLGEDGN---VMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRV 235
+ G E + V+++ E+ N IW ++L AC + G+ VA +L+ ET
Sbjct: 432 KAGETEEIWRLVERMMENDNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLME-ETGPEN 490
Query: 236 AGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSL 275
A +VL+SN YA G+W+ V+ +R ++ KGL K G SL
Sbjct: 491 ASIYVLVSNFYAAMGKWDVVEELRGKLKNKGLVKTAGHSL 530
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 68/133 (51%), Gaps = 2/133 (1%)
Query: 23 LHKVIPN--AVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGA 80
+H+ P+ + T + +L ACS Q+H I+ + + TAL+D YSK G
Sbjct: 75 IHRASPDLSSHTFTPVLGACSLLSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGH 134
Query: 81 ISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSA 140
+ + VF + EK+ V++ ++ + ++G G+ AL ++ +M R ++ +++
Sbjct: 135 LVDSVRVFESVEEKDLVSWNALLSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKT 194
Query: 141 CSYAGLVDEGLEI 153
C+ ++ +G ++
Sbjct: 195 CASLKILQQGKQV 207
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/269 (35%), Positives = 154/269 (57%), Gaps = 7/269 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLH-KVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
MI+GY Q+ + A+ RE + +V P+A+T+ S+ A SS GS+ + H +
Sbjct: 408 MISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFS 467
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVT---YTTMMMSYGQHGMGRRAL 116
+ N A++D Y+K G+I A N+F++ +S T + ++ HG + AL
Sbjct: 468 TIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLAL 527
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
LY + IKP+++ FV +LSAC +AGLV+ G FESM H I+P +HY C+ D+
Sbjct: 528 DLYSDLQSLPIKPNSITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDL 587
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVA 236
LG+ GR+ EA E +K++ +VM IWG +L A + HG E+ ++ A +L +++
Sbjct: 588 LGKAGRLEEAKEMIKKMPVKADVM-IWGMLLSASRTHGNVEIAELAATELAAIDPSH--G 644
Query: 237 GYHVLLSNIYAEEGEWENVDRVRNQITEK 265
G V+LSN+YA+ G WE+V VR ++ +
Sbjct: 645 GCKVMLSNVYADAGRWEDVALVREEMRTR 673
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 5/166 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GY QN +A+ RE ++ N VTL++++ ACS G I L +I+
Sbjct: 144 LIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLK 203
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ V+ T L+ Y + A +F+ MPE+N VT+ M+ Y + G+ +A L+D
Sbjct: 204 LEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFD 263
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPS 166
+ + D V++ ++ C +DE L + M++ +KPS
Sbjct: 264 QI----TEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRC-GMKPS 304
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/252 (22%), Positives = 105/252 (41%), Gaps = 34/252 (13%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGF----- 55
MI G + ++A++ E L + P+ V + +L A + + + QLHG
Sbjct: 276 MIDGCLRKNQLDEALVYYTEMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRG 335
Query: 56 ---------SIRHF-----------------MDQNVYAGTALVDTYSKSGAISYAENVFN 89
+I HF + ++ + AL+ + K+G + A VF+
Sbjct: 336 FDCYDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFD 395
Query: 90 RMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSG-IKPDAVAFVAILSACSYAGLVD 148
+ +K+ ++ M+ Y Q + AL L+ M+ S +KPDA+ V++ SA S G ++
Sbjct: 396 QTHDKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLE 455
Query: 149 EGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGE-DGNVMEIWGSIL 207
EG + + I P+ + DM + G + A Q + + W +I+
Sbjct: 456 EGKRAHDYL-NFSTIPPNDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAII 514
Query: 208 GACKNHGYFELG 219
HG+ +L
Sbjct: 515 CGSATHGHAKLA 526
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 111/266 (41%), Gaps = 70/266 (26%)
Query: 33 LSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVF---- 88
L S L +C+S+ + Q+H ++ +D N Y ++++ Y+K ++ AE+VF
Sbjct: 44 LVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHA 103
Query: 89 ---------------------------NRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDS 121
+ MPE++ V+YTT++ Y Q+ A+ L+
Sbjct: 104 KLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFRE 163
Query: 122 MLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVG 181
M GI + V ++SACS+ G + + M++ IK E GRV
Sbjct: 164 MRNLGIMLNEVTLATVISACSHLGGIWDC-----RMLQSLAIKLKLE---------GRV- 208
Query: 182 RVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVL 241
FV N++ ++ L C A KL E+ + ++V+
Sbjct: 209 -------FVST-----NLLHMY--CLCLCLKD---------ARKLFDEMPERNLVTWNVM 245
Query: 242 LSNIYAEEGEWENVDRVRNQITEKGL 267
L N Y++ G E + + +QITEK +
Sbjct: 246 L-NGYSKAGLIEQAEELFDQITEKDI 270
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 100/286 (34%), Positives = 160/286 (55%), Gaps = 21/286 (7%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI Y + GL E+ + LR+ K+ PN+ T +L +C+ + + AF G ++
Sbjct: 299 MIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVGLLSSCAYSEA-AFV----GRTVADL 353
Query: 61 MDQNVYA-----GTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRA 115
+++ A GTALVD Y+K G + A +FNRM +K+ ++T M+ YG HG+ R A
Sbjct: 354 LEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDKDVKSWTAMISGYGAHGLAREA 413
Query: 116 LTLYDSMLRSG--IKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCV 173
+TL++ M ++P+ + F+ +L+ACS+ GLV EG+ F+ MV+ + P EHY CV
Sbjct: 414 VTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIRCFKRMVEAYSFTPKVEHYGCV 473
Query: 174 ADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSM-ETE 232
D+LGR G++ EAYE ++ L + W ++L AC+ +G +LG+ V +L M ET
Sbjct: 474 VDLLGRAGQLEEAYELIRNLPITSDSTA-WRALLAACRVYGNADLGESVMMRLAEMGETH 532
Query: 233 KRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEI 278
A +LL+ +A G N ++ + KG KE G S +EI
Sbjct: 533 PADA---ILLAGTHAVAG---NPEKSLDNELNKG-RKEAGYSAIEI 571
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 104/214 (48%), Gaps = 3/214 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++ GY Q A+ R +V+ N TL S L A S G ++ A H I+
Sbjct: 198 LMNGYLQVSKKALALDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIG 257
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+D +++ TAL+ Y K+G IS A +F+ K+ VT+ M+ Y + G+ + L
Sbjct: 258 LDLDLHLITALIGMYGKTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLR 317
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M +KP++ FV +LS+C+Y+ G + + +++ +I + DM +V
Sbjct: 318 QMKYEKMKPNSSTFVGLLSSCAYSEAAFVGRTVAD-LLEEERIALDAILGTALVDMYAKV 376
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
G + +A E ++ +D +V + W +++ HG
Sbjct: 377 GLLEKAVEIFNRM-KDKDV-KSWTAMISGYGAHG 408
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 125/303 (41%), Gaps = 44/303 (14%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI GY+ + E+A + + + + + L +CS ++ LHG ++R
Sbjct: 96 MIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALRSG 155
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK-NSVTYTTMMMSYGQHGMGRRALTLY 119
AL+ Y G IS A VF+ MP+ ++VT++T+M Y Q AL L+
Sbjct: 156 FMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALDLF 215
Query: 120 DSMLRSGIKPDAVAFVAILSA----------------CSYAGLVDEGLEIFESMVKIH-- 161
M +S + + ++ LSA C GL D L + +++ ++
Sbjct: 216 RIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGL-DLDLHLITALIGMYGK 274
Query: 162 -------------KIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDG---NVMEIWGS 205
I+ + C+ D + G + E ++Q+ + N G
Sbjct: 275 TGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYEKMKPNSSTFVG- 333
Query: 206 ILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVL---LSNIYAEEGEWENVDRVRNQI 262
+L +C +G+ VA+ L E+R+A +L L ++YA+ G E + N++
Sbjct: 334 LLSSCAYSEAAFVGRTVADLL----EEERIALDAILGTALVDMYAKVGLLEKAVEIFNRM 389
Query: 263 TEK 265
+K
Sbjct: 390 KDK 392
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/163 (20%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
P L + L +C T + +++HG+ ++ +D++ +A + L+ +S I YA ++
Sbjct: 26 PQCQKLINDLRSCRDTVEV---SRIHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSI 81
Query: 88 FNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLV 147
F + N + TM+ Y RA ++++ + G+ D +F+ L +CS V
Sbjct: 82 FEHVSNTNLFMFNTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCV 141
Query: 148 D-----EGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVE 185
G+ + + ++ + H+ CV + +V +
Sbjct: 142 SIGEGLHGIALRSGFMVFTDLRNALIHFYCVCGKISDARKVFD 184
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 160 bits (406), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 169/307 (55%), Gaps = 11/307 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREAL-LHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
MI GY + G KA+ + + + N VT+ S++ AC+ G++ +H + +
Sbjct: 211 MIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDV 270
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNR--MPEKNSVTYTTMMMSYGQHGMGRRALT 117
+ V T+L+D Y+K G+I A +VF R + E +++ + ++ HG R +L
Sbjct: 271 HLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAIIGGLASHGFIRESLQ 330
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADML 177
L+ M S I PD + F+ +L+ACS+ GLV E F+S+ K +P +EHY C+ D+L
Sbjct: 331 LFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSL-KESGAEPKSEHYACMVDVL 389
Query: 178 GRVGRVVEAYEFVKQLG--EDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRV 235
R G V +A++F+ ++ G+++ G++L C NHG EL + V +KL+ ++
Sbjct: 390 SRAGLVKDAHDFISEMPIKPTGSML---GALLNGCINHGNLELAETVGKKLIELQPHND- 445
Query: 236 AGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQS 295
G +V L+N+YA ++ +R + +KG+ K G S++++ G + F++ D+ H S
Sbjct: 446 -GRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSILDLDGTRHRFIAHDKTHFHS 504
Query: 296 GEIYDIL 302
+IY +L
Sbjct: 505 DKIYAVL 511
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 83/154 (53%), Gaps = 2/154 (1%)
Query: 63 QNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSM 122
+N+ +++D Y+KSG + A VF+ M E++ VT+++M+ Y + G +AL ++D M
Sbjct: 172 KNLVTWNSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQM 231
Query: 123 LRSG-IKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVG 181
+R G K + V V+++ AC++ G ++ G + ++ +H + + + DM + G
Sbjct: 232 MRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVH-LPLTVILQTSLIDMYAKCG 290
Query: 182 RVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGY 215
+ +A+ + +W +I+G +HG+
Sbjct: 291 SIGDAWSVFYRASVKETDALMWNAIIGGLASHGF 324
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 158/277 (57%), Gaps = 6/277 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+G++Q G +A L ++P+ L+S+L ACS ++ ++HG I+
Sbjct: 339 LISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAA 398
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRM-PE-KNSVTYTTMMMSYGQHGMGRRALTL 118
+++++ T+L+D Y K G S+A +F+R P+ K+ V + M+ YG+HG A+ +
Sbjct: 399 AERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKHGECESAIEI 458
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
++ + ++P F A+LSACS+ G V++G +IF M + + KPSTEH C+ D+LG
Sbjct: 459 FELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLG 518
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
R GR+ EA E + Q+ E + + S+LG+C+ H LG+ A KL +E E
Sbjct: 519 RSGRLREAKEVIDQMSEPSSSVYS--SLLGSCRQHLDPVLGEEAAMKLAELEPEN--PAP 574
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSL 275
V+LS+IYA WE+V+ +R I +K L K G SL
Sbjct: 575 FVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLSL 611
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 114/253 (45%), Gaps = 26/253 (10%)
Query: 2 IAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFM 61
++G +NG A +A + N+VT++S+L C G I QLH +++
Sbjct: 104 VSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDIEGGMQLHCLAMKSGF 160
Query: 62 DQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDS 121
+ VY GT+LV YS+ G A +F ++P K+ VTY + ++G+ ++++
Sbjct: 161 EMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNL 220
Query: 122 MLR-SGIKPDAVAFVAILSACS----------YAGLVDEGLEIFESMVKIHKIKPSTEHY 170
M + S +P+ V FV ++AC+ GLV + FE+MV I
Sbjct: 221 MRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALI------- 273
Query: 171 CCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSME 230
DM + AY +L + N++ W S++ +G E + EKL S
Sbjct: 274 ----DMYSKCRCWKSAYIVFTELKDTRNLIS-WNSVISGMMINGQHETAVELFEKLDSEG 328
Query: 231 TEKRVAGYHVLLS 243
+ A ++ L+S
Sbjct: 329 LKPDSATWNSLIS 341
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
PN VT + + AC+S ++ + QLHG ++ GTAL+D YSK A V
Sbjct: 229 PNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIV 288
Query: 88 FNRMPE-KNSVTYTTM---MMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSY 143
F + + +N +++ ++ MM GQH A+ L++ + G+KPD+ + +++S S
Sbjct: 289 FTELKDTRNLISWNSVISGMMINGQH---ETAVELFEKLDSEGLKPDSATWNSLISGFSQ 345
Query: 144 AGLVDEGLEIFESMVKIHKIKPSTEHYCCVADML 177
G V E + FE M+ + + PS + C+ +L
Sbjct: 346 LGKVIEAFKFFERMLSVVMV-PSLK---CLTSLL 375
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
PN T +L +C+ G + LH ++ +V+ TALV Y K ++ A V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 88 FNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLV 147
+ MPE+ + + ++G R A ++ SG ++V ++L C G +
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGC---GDI 145
Query: 148 DEGLEI 153
+ G+++
Sbjct: 146 EGGMQL 151
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/280 (32%), Positives = 153/280 (54%), Gaps = 12/280 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IAGY QNG ++ AI P+AVT+SSIL AC+ +G + ++H
Sbjct: 245 LIAGYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRG 304
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ N + AL+D Y+K G + A +VF + ++ +M+ HG G+ AL ++
Sbjct: 305 IELNQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLAIHGKGKEALEMFS 364
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
+M +KPD + F+A+L+AC + G + EGL+IF M K +KP+ +H+ C+ +LGR
Sbjct: 365 TMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM-KTQDVKPNVKHFGCLIHLLGRS 423
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVV------AEKLLSMETEKR 234
G++ EAY VK++ N + G++LGACK H E+ + V A + + +E
Sbjct: 424 GKLKEAYRLVKEMHVKPND-TVLGALLGACKVHMDTEMAEQVMKIIETAGSITNSYSENH 482
Query: 235 VAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCS 274
+A +SN+YA W+ + +R ++ ++GL K G S
Sbjct: 483 LAS----ISNLYAHTERWQTAEALRVEMEKRGLEKSPGLS 518
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 52/92 (56%)
Query: 62 DQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDS 121
++N + + ++ Y + G + A +F R+ ++ V + T++ Y Q+G A+ + +
Sbjct: 205 EKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFN 264
Query: 122 MLRSGIKPDAVAFVAILSACSYAGLVDEGLEI 153
M G +PDAV +ILSAC+ +G +D G E+
Sbjct: 265 MQGEGYEPDAVTVSSILSACAQSGRLDVGREV 296
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 27 IPNAVTLSSILPACSST-GSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAE 85
P V L IL AC+ + LH SI+ + +V G++L+ Y K G + A
Sbjct: 44 FPGWVPL--ILRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSAR 101
Query: 86 NVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAG 145
VF+ MPE+N T+ M+ Y +G A L++ + + + V ++ ++
Sbjct: 102 KVFDEMPERNVATWNAMIGGYMSNGDAVLASGLFEEI---SVCRNTVTWIEMIKGYGKRI 158
Query: 146 LVDEGLEIFESM 157
+++ E+FE M
Sbjct: 159 EIEKARELFERM 170
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 146/276 (52%), Gaps = 4/276 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G ++G N A RE + + + +S+IL CSS S+ + Q+HG I+
Sbjct: 414 LIRGCVKSGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKG 473
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ TALVD Y K G I +F+ M E++ V++T +++ +GQ+G A +
Sbjct: 474 YESEPVTATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFH 533
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+ GI+P+ V F+ +LSAC ++GL++E E+M + ++P EHY CV D+LG+
Sbjct: 534 KMINIGIEPNKVTFLGLLSACRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQA 593
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G EA E + ++ + + IW S+L AC H L V+AEKLL + +
Sbjct: 594 GLFQEANELINKMPLEPD-KTIWTSLLTACGTHKNAGLVTVIAEKLLKGFPDD--PSVYT 650
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLV 276
LSN YA G W+ + +VR + G KE G S +
Sbjct: 651 SLSNAYATLGMWDQLSKVREAAKKLG-AKESGMSWI 685
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 5/177 (2%)
Query: 37 LPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNS 96
L C + + I+ + QNV+ ++ Y +S A VF+ M E+N
Sbjct: 12 LRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKVFDEMSERNI 71
Query: 97 VTYTTMMMSYGQHGMGRRALTLYDSMLRSGIK-PDAVAFVAILSACSYAGLVDEGLEIFE 155
VT+TTM+ Y G +A+ LY ML S + + + A+L AC G + G+ ++E
Sbjct: 72 VTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYE 131
Query: 156 SMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSIL-GACK 211
+ K ++ V DM + GR++EA K++ + W +++ G CK
Sbjct: 132 RIGK-ENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTS--WNTLISGYCK 185
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/266 (20%), Positives = 109/266 (40%), Gaps = 44/266 (16%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M++G+ N NE A+ L + + ++ TLS L C + ++ Q+H +
Sbjct: 313 MLSGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSG 372
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + G+ LVD ++ G I A +F+R+P K+ + ++ ++ + G A L+
Sbjct: 373 YELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFR 432
Query: 121 SMLRSGIKPDAVAFVAILSACSY-----------------------------------AG 145
+++ G+ D IL CS G
Sbjct: 433 ELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCG 492
Query: 146 LVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQL---GEDGNVMEI 202
+D G+ +F+ M++ + + + G+ GRV EA+ + ++ G + N +
Sbjct: 493 EIDNGVVLFDGMLERDVVS-----WTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTF 547
Query: 203 WGSILGACKNHGYFELGKVVAEKLLS 228
G +L AC++ G E + E + S
Sbjct: 548 LG-LLSACRHSGLLEEARSTLETMKS 572
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 97/241 (40%), Gaps = 37/241 (15%)
Query: 1 MIAGYTQNGLNEKAILTLREAL-LHKVIPNAVTLSSILPACSSTGSIAFATQLH------ 53
M++GYT +G KAI R L + N S++L AC G I ++
Sbjct: 77 MVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGDIQLGILVYERIGKE 136
Query: 54 -------------------------GFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVF 88
S + + + + L+ Y K+G + A +F
Sbjct: 137 NLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVTLF 196
Query: 89 NRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVD 148
+RMP+ N V++ ++ + G RAL M R G+ D A L ACS+ GL+
Sbjct: 197 HRMPQPNVVSWNCLISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLT 255
Query: 149 EGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQ--LGEDGNVMEIWGSI 206
G ++ +VK ++ S + DM G ++ A + Q L + +V +W S+
Sbjct: 256 MGKQLHCCVVK-SGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSV-AVWNSM 313
Query: 207 L 207
L
Sbjct: 314 L 314
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 109/233 (46%), Gaps = 9/233 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+G+ G + +A+ L ++ + L L ACS G + QLH ++
Sbjct: 210 LISGFVDKG-SPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLLTMGKQLHCCVVKSG 268
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFN--RMPEKNSV-TYTTMMMSYGQHGMGRRALT 117
++ + +A +AL+D YS G++ YA +VF+ ++ +SV + +M+ + + AL
Sbjct: 269 LESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSMLSGFLINEENEAALW 328
Query: 118 LYDSMLRSGIKPDAVAFVAILSAC-SYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
L + +S + D+ L C +Y L GL++ S+V + + + D+
Sbjct: 329 LLLQIYQSDLCFDSYTLSGALKICINYVNL-RLGLQV-HSLVVVSGYELDYIVGSILVDL 386
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSM 229
VG + +A++ +L + +++ G I G C G+ L + +L+ +
Sbjct: 387 HANVGNIQDAHKLFHRL-PNKDIIAFSGLIRG-CVKSGFNSLAFYLFRELIKL 437
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 157 bits (398), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/258 (34%), Positives = 148/258 (57%), Gaps = 8/258 (3%)
Query: 26 VIPNAVTLSSILPACSSTGSIAFATQLHGF--SIRHFMDQNVYAGTALVDTYSKSGAISY 83
V P T+ +L A S TG + + +HG+ + + +V+ GTALVD YSK G ++
Sbjct: 216 VRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNN 275
Query: 84 AENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSY 143
A +VF M KN T+T+M +G G L + M SGIKP+ + F ++LSA +
Sbjct: 276 AFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRH 335
Query: 144 AGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIW 203
GLV+EG+E+F+SM + P EHY C+ D+LG+ GR+ EAY+F+ + + + +
Sbjct: 336 IGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAI-LL 394
Query: 204 GSILGACKNHGYFELGKVVAEKLLSMETE-KRVAGY----HVLLSNIYAEEGEWENVDRV 258
S+ AC +G +G+ + + LL +E E ++++G +V LSN+ A +G+W V+++
Sbjct: 395 RSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKL 454
Query: 259 RNQITEKGLHKEMGCSLV 276
R ++ E+ + G S V
Sbjct: 455 RKEMKERRIKTRPGYSFV 472
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 7/98 (7%)
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHG-----MGRR 114
F+ ++ GT L+ Y+K+G + YA VF+ MPE+ SVT+ M+ Y H R+
Sbjct: 142 FLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNHNARK 201
Query: 115 ALTLYD--SMLRSGIKPDAVAFVAILSACSYAGLVDEG 150
A+ L+ S SG++P V +LSA S GL++ G
Sbjct: 202 AMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIG 239
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 156 bits (394), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 159/274 (58%), Gaps = 8/274 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK---VIPNAVTLSSILPACSS--TGSIAFATQLHGF 55
+I G+++ GL+ KA++ E + ++ + PN T S+L +C++ G I Q+HG+
Sbjct: 189 VINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGY 248
Query: 56 SIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRA 115
+ + GTAL+D Y K+G + A +F+++ +K + ++ + +G ++A
Sbjct: 249 VMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQA 308
Query: 116 LTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD 175
L +++ M S + P+ + +AIL+AC+ + LVD G+++F S+ +KI P++EHY CV D
Sbjct: 309 LEMFEMMKSSYVHPNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVD 368
Query: 176 MLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRV 235
++GR G +V+A F++ L + + + G++LGACK H ELG V ++L+ ++ +
Sbjct: 369 LIGRAGLLVDAANFIQSLPFEPDA-SVLGALLGACKIHENTELGNTVGKQLIGLQPQH-- 425
Query: 236 AGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHK 269
G +V LS A + W +++R + E G+ K
Sbjct: 426 CGQYVALSTFNALDSNWSEAEKMRKAMIEAGIRK 459
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 110/250 (44%), Gaps = 39/250 (15%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH- 59
+I Y G + ++ L V PN +T S++ A S+ S+++ LHG +++
Sbjct: 57 LIRSYLTTGEYKTSLALFTHMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRG 116
Query: 60 ------------------------------FMDQNVYAGTALVDTYSKSGAISYAENVFN 89
++ V A +L+D ++G + YA F
Sbjct: 117 FLWDPFVQTSFVRFYGEVGDLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQ 176
Query: 90 RMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSML---RSGIKPDAVAFVAILSACSY--A 144
RMP + V++TT++ + + G+ +AL ++ M+ R+ I P+ FV++LS+C+
Sbjct: 177 RMPVTDVVSWTTVINGFSKKGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQ 236
Query: 145 GLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWG 204
G + G +I V +I +T + DM G+ G + A Q+ D V W
Sbjct: 237 GGIRLGKQI-HGYVMSKEIILTTTLGTALLDMYGKAGDLEMALTIFDQI-RDKKVCA-WN 293
Query: 205 SILGACKNHG 214
+I+ A ++G
Sbjct: 294 AIISALASNG 303
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 157/306 (51%), Gaps = 3/306 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IAGY QNG ++A+ R+ + +PN+VT+ S+LPAC++ ++HG +R
Sbjct: 495 IIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVREIHGCVLRRN 554
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+D AL DTY+KSG I Y+ +F M K+ +T+ +++ Y HG AL L++
Sbjct: 555 LDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGGYVLHGSYGPALALFN 614
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M GI P+ +I+ A G VDEG ++F S+ + I P+ EH + + GR
Sbjct: 615 QMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVYLYGRA 674
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
R+ EA +F++++ IW S L C+ HG ++ AE L S+E E
Sbjct: 675 NRLEEALQFIQEMNIQSET-PIWESFLTGCRIHGDIDMAIHAAENLFSLEPEN--TATES 731
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
++S IYA + + L K +G S +E+ L++ F + D+ + +Y
Sbjct: 732 IVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIEVRNLIHTFTTGDQSKLCTDVLYP 791
Query: 301 ILDKLT 306
+++K++
Sbjct: 792 LVEKMS 797
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 128/259 (49%), Gaps = 11/259 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+G NG+ +A+ R+ L V+PNAVT+ S + ACS I +++H +++
Sbjct: 323 MISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMG 382
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+V G +LVD YSK G + A VF+ + K+ T+ +M+ Y Q G +A L+
Sbjct: 383 FIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFT 442
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M + ++P+ + + ++S G E +++F+ M K K++ +T + + +
Sbjct: 443 RMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQN 502
Query: 181 GRVVEAYEFVKQLGED---GNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAG 237
G+ EA E +++ N + I S+L AC N LG + ++ + +
Sbjct: 503 GKKDEALELFRKMQFSRFMPNSVTIL-SLLPACANL----LGAKMVREIHGCVLRRNLDA 557
Query: 238 YHVL---LSNIYAEEGEWE 253
H + L++ YA+ G+ E
Sbjct: 558 IHAVKNALTDTYAKSGDIE 576
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 95/195 (48%), Gaps = 7/195 (3%)
Query: 32 TLSSILPACSSTGSIAFATQLHG-FSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNR 90
T +L +C +GSI LH F + F + +V+ T L+ Y+K G I+ A VF+
Sbjct: 83 TYLKLLESCIDSGSIHLGRILHARFGL--FTEPDVFVETKLLSMYAKCGCIADARKVFDS 140
Query: 91 MPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEG 150
M E+N T++ M+ +Y + R L+ M++ G+ PD F IL C+ G V+ G
Sbjct: 141 MRERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAG 200
Query: 151 LEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGA- 209
I ++K+ + + + + G + A +F +++ E + W S+L A
Sbjct: 201 KVIHSVVIKL-GMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIA--WNSVLLAY 257
Query: 210 CKNHGYFELGKVVAE 224
C+N + E ++V E
Sbjct: 258 CQNGKHEEAVELVKE 272
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 72/157 (45%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI Y++ + R + V+P+ IL C++ G + +H I+
Sbjct: 152 MIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIHSVVIKLG 211
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
M + +++ Y+K G + +A F RM E++ + + +++++Y Q+G A+ L
Sbjct: 212 MSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKHEEAVELVK 271
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESM 157
M + GI P V + ++ + G D +++ + M
Sbjct: 272 EMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM 308
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 88/276 (31%), Positives = 149/276 (53%), Gaps = 8/276 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M GY Q G + RE ++V + S+L AC G++ +HG+ IR
Sbjct: 206 MFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSLLMACGQLGALKHGKSVHGWCIRRC 265
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ G A+ D Y K + YA VF M ++ ++++++++ YG G + L+D
Sbjct: 266 SCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVISWSSLILGYGLDGDVVMSFKLFD 325
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
ML+ GI+P+AV F+ +LSAC++ GLV++ F M + + I P +HY VAD + R
Sbjct: 326 EMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQE-YNIVPELKHYASVADCMSRA 384
Query: 181 GRVVEAYEFVKQLG--EDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
G + EA +F++ + D VM G++L CK +G E+G+ VA +L+ ++ K A Y
Sbjct: 385 GLLEEAEKFLEDMPVKPDEAVM---GAVLSGCKVYGNVEVGERVARELIQLKPRK--ASY 439
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCS 274
+V L+ +Y+ G ++ + +R + EK + K GCS
Sbjct: 440 YVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPGCS 475
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 74/151 (49%), Gaps = 1/151 (0%)
Query: 1 MIAGYTQNGLNEKAI-LTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+I ++++G K+I L LR V P+ TL IL ACS++ +H ++
Sbjct: 104 IIGEFSRSGFASKSIDLFLRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKL 163
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+++ +ALV Y G + +A +F+ MP ++SV YT M Y Q G L ++
Sbjct: 164 GFSSSLFVSSALVIMYVDMGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMF 223
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEG 150
M SG D+V V++L AC G + G
Sbjct: 224 REMGYSGFALDSVVMVSLLMACGQLGALKHG 254
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 149/271 (54%), Gaps = 5/271 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G G +A+ + + P+ T+ S+ +C G ++ A QLH ++
Sbjct: 189 IIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAK 248
Query: 61 MDQ--NVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
++ ++ +L+D Y K G + A ++F M ++N V++++M++ Y +G AL
Sbjct: 249 TEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALEC 308
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
+ M G++P+ + FV +LSAC + GLV+EG F M +++P HY C+ D+L
Sbjct: 309 FRQMREFGVRPNKITFVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLS 368
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
R G++ EA + V+++ NVM +WG ++G C+ G E+ + VA ++ +E G
Sbjct: 369 RDGQLKEAKKVVEEMPMKPNVM-VWGCLMGGCEKFGDVEMAEWVAPYMVELEPWN--DGV 425
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHK 269
+V+L+N+YA G W++V+RVR + K + K
Sbjct: 426 YVVLANVYALRGMWKDVERVRKLMKTKKVAK 456
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 16/200 (8%)
Query: 26 VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAE 85
V+P+ +L ++ A +LH ++R + + + + Y K+G A
Sbjct: 113 VLPDRYSLPIVIKAAVQIHDFTLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENAR 172
Query: 86 NVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAG 145
VF+ PE+ ++ ++ G A+ ++ M RSG++PD V++ ++C G
Sbjct: 173 KVFDENPERKLGSWNAIIGGLNHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASC--GG 230
Query: 146 LVDEGLEIFESMVKIHK--IKPSTEHYC------CVADMLGRVGRVVEAYEFVKQLGEDG 197
L D L ++HK ++ TE + DM G+ GR+ A +++ +
Sbjct: 231 LGDLSLAF-----QLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQR- 284
Query: 198 NVMEIWGSILGACKNHGYFE 217
NV+ I+G N E
Sbjct: 285 NVVSWSSMIVGYAANGNTLE 304
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 154 bits (390), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 86/268 (32%), Positives = 153/268 (57%), Gaps = 10/268 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M+ GY +GL +A+ R + + + P+ V +SS+L + S QLHG+ IR
Sbjct: 267 MLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAISSVL---ARVLSFKHGRQLHGWVIRRG 323
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
M+ + AL+ YSK G + A +F++M E+++V++ ++ ++ ++ G L ++
Sbjct: 324 MEWELSVANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNG---LKYFE 380
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M R+ KPD + FV++LS C+ G+V++G +F M K + I P EHY C+ ++ GR
Sbjct: 381 QMHRANAKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRA 440
Query: 181 GRVVEAYE-FVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G + EAY V+++G + +WG++L AC HG ++G+V A++L +E +
Sbjct: 441 GMMEEAYSMIVQEMGLEAGPT-VWGALLYACYLHGNTDIGEVAAQRLFELEPDNE--HNF 497
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGL 267
LL IY++ E+V+RVR + ++GL
Sbjct: 498 ELLIRIYSKAKRAEDVERVRQMMVDRGL 525
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 75/139 (53%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+GY + G E A+ + V P+ T +L AC GS+ +H ++
Sbjct: 166 LISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEG 225
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+VY ALV Y+K G I A NVF+ +P K+ V++ +M+ Y HG+ AL ++
Sbjct: 226 FGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLHHGLLHEALDIFR 285
Query: 121 SMLRSGIKPDAVAFVAILS 139
M+++GI+PD VA ++L+
Sbjct: 286 LMVQNGIEPDKVAISSVLA 304
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Query: 33 LSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMP 92
+S+L C S +I ++H + + N+ + LV Y+ G A VF+RM
Sbjct: 95 FASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRMS 154
Query: 93 EKNS--VTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEG 150
+++S + +++ Y + G A+ LY M G+KPD F +L AC G V G
Sbjct: 155 KRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQIG 214
Query: 151 LEIFESMVK 159
I +VK
Sbjct: 215 EAIHRDLVK 223
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 151/281 (53%), Gaps = 22/281 (7%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M+ GY +G E+A+ T R+ + K PNAVT +I+ A + ++ +H I+
Sbjct: 575 MMNGYLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCG 634
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
G +LVD Y+K G I +E F + K V++ TM+ +Y HG+ A++L+
Sbjct: 635 FCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFL 694
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
SM + +KPD+V+F+++LSAC +AGLV+EG IFE M + HKI+ EHY C+ D+LG+
Sbjct: 695 SMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKA 754
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G EA E ++++ +V +WG++L + + H L +L+ +E
Sbjct: 755 GLFGEAVEMMRRMRVKTSV-GVWGALLNSSRMHCNLWLSNAALCQLVKLEP--------- 804
Query: 241 LLSNIYAEE---GEWENVDRVRNQITEKGLHKEMGCSLVEI 278
L + Y+++ GE NV R++ K CS +E+
Sbjct: 805 LNPSHYSQDRRLGEVNNVSRIK---------KVPACSWIEV 836
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 83/159 (52%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MIA Y Q G +++AI R+ + + PNAVTL+S+L C+ + +H ++I+
Sbjct: 372 MIASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKAD 431
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ + TA++ Y+K G S A F R+P K++V + + Y Q G +A +Y
Sbjct: 432 IESELETATAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYK 491
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
+M G+ PD+ V +L C++ G ++ ++K
Sbjct: 492 NMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIK 530
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 107/229 (46%), Gaps = 9/229 (3%)
Query: 4 GYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQ 63
GYTQ G KA + LH V P++ T+ +L C+ A + ++G I+H D
Sbjct: 476 GYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDS 535
Query: 64 NVYAGTALVDTYSKSGAISYAENVFNRMP-EKNSVTYTTMMMSYGQHGMGRRALTLYDSM 122
+ AL++ ++K A++ A +F++ EK++V++ MM Y HG A+ + M
Sbjct: 536 ECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQM 595
Query: 123 LRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGR 182
+P+AV FV I+ A + + G+ + S+++ T + DM + G
Sbjct: 596 KVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQC-GFCSQTPVGNSLVDMYAKCG- 653
Query: 183 VVEAYEFVKQLGEDGNVMEI-WGSILGACKNHGYFELGKVVAEKLLSME 230
++E+ E K E N + W ++L A HG L LSM+
Sbjct: 654 MIESSE--KCFIEISNKYIVSWNTMLSAYAAHG---LASCAVSLFLSMQ 697
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 92/193 (47%), Gaps = 1/193 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M+A Y NG E+ + + V N V +S L A + G + +H ++++
Sbjct: 271 MMAAYAHNGFFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQG 330
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ +V T+L+ YSK G + AE +F + +++ V+++ M+ SY Q G A++L+
Sbjct: 331 LIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFR 390
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+R IKP+AV ++L C+ G I +K I+ E V M +
Sbjct: 391 DMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKA-DIESELETATAVISMYAKC 449
Query: 181 GRVVEAYEFVKQL 193
GR A + ++L
Sbjct: 450 GRFSPALKAFERL 462
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 100/223 (44%), Gaps = 16/223 (7%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVI-PNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
MI GYT+ GL+ +A+ K I P+ + + L AC+ + ++H
Sbjct: 70 MIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEM 129
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
++ +VY GTALV+ Y K+ + A VF++M K+ VT+ TM+ Q+G AL L+
Sbjct: 130 GLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLF 189
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVD-----EGLEIFESMVKIHKIKPSTEHYCCVA 174
M + D V+ ++ A S D GL I + + + YC A
Sbjct: 190 HDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGFIFAFS-SGLIDMYCNCA 248
Query: 175 DMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFE 217
D+ +E V + E WG+++ A ++G+FE
Sbjct: 249 DLYA----AESVFEEVWRKDESS-----WGTMMAAYAHNGFFE 282
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 4/160 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M++G QNG + A+L + V + V+L +++PA S LHG I+
Sbjct: 172 MVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKG 231
Query: 61 MDQNVYA-GTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
++A + L+D Y + AE+VF + K+ ++ TMM +Y +G L L+
Sbjct: 232 F---IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELF 288
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
D M ++ + VA + L A +Y G + +G+ I + V+
Sbjct: 289 DLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQ 328
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 152 bits (384), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/304 (31%), Positives = 164/304 (53%), Gaps = 6/304 (1%)
Query: 29 NAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVF 88
+ ++L + A ++ G++ LH +S++ +LVD YSK G++ A+ VF
Sbjct: 527 DQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVF 586
Query: 89 NRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVD 148
+ + V++ ++ +G AL+ ++ M +PD+V F+ +LSACS L D
Sbjct: 587 EEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTD 646
Query: 149 EGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILG 208
GLE F+ M KI+ I+P EHY + +LGR GR+ EA V+ + N M I+ ++L
Sbjct: 647 LGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAM-IFKTLLR 705
Query: 209 ACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLH 268
AC+ G LG+ +A K L++ ++LL+++Y E G+ E + RN +TEK L
Sbjct: 706 ACRYRGNLSLGEDMANKGLALAPSD--PALYILLADLYDESGKPELAQKTRNLMTEKRLS 763
Query: 269 KEMGCSLVEIGGLVNYFVSRD-EKHPQSGEIYDILDKLTMDIKDAG--YKTRYNSSLNEI 325
K++G S VE+ G V+ FVS D + ++ IY ++ + +IK G Y+ N+S +
Sbjct: 764 KKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAEIESIKEEIKRFGSPYRGNENASFHSA 823
Query: 326 VETV 329
+ V
Sbjct: 824 KQAV 827
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 114/243 (46%), Gaps = 3/243 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G +G + L E + +V PN VTLS +L ACS + ++H + +R
Sbjct: 398 LILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH 457
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+D + G +LVD Y+ S + YA NV M ++++TYT+++ + + G AL++ +
Sbjct: 458 VDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVIN 517
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M GI+ D ++ +SA + G ++ G + VK + + DM +
Sbjct: 518 YMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVK-SGFSGAASVLNSLVDMYSKC 576
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + +A + +++ V W ++ ++G+ E++ ETE + +
Sbjct: 577 GSLEDAKKVFEEIATPDVVS--WNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLI 634
Query: 241 LLS 243
LLS
Sbjct: 635 LLS 637
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 76/146 (52%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+ +T++ A+ E + PN T SS++ +C+ I++ ++HG I+
Sbjct: 95 MISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTG 154
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ N G++L D YSK G A +F+ + +++++T M+ S R AL Y
Sbjct: 155 FEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISSLVGARKWREALQFYS 214
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGL 146
M+++G+ P+ FV +L A S+ GL
Sbjct: 215 EMVKAGVPPNEFTFVKLLGASSFLGL 240
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 81/162 (50%), Gaps = 1/162 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+++G+ +N ++A+ T E + PN T S+IL CS+ S+ F Q+H +I+
Sbjct: 296 VVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVG 355
Query: 61 MDQNVYAGTALVDTYSKSGAISY-AENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ + G ALVD Y K A A VF M N V++TT+++ HG + L
Sbjct: 356 FEDSTDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLL 415
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIH 161
M++ ++P+ V +L ACS V LEI +++ H
Sbjct: 416 MEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH 457
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 1/135 (0%)
Query: 26 VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAE 85
V PN T +L A S G + F +H I + NV T+LVD YS+ + A
Sbjct: 221 VPPNEFTFVKLLGASSFLG-LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAV 279
Query: 86 NVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAG 145
V N E++ +T+++ + ++ + A+ + M G++P+ + AILS CS
Sbjct: 280 RVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVR 339
Query: 146 LVDEGLEIFESMVKI 160
+D G +I +K+
Sbjct: 340 SLDFGKQIHSQTIKV 354
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 89/285 (31%), Positives = 149/285 (52%), Gaps = 4/285 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+ Y +I RE + N TL +L AC + + +H IR F
Sbjct: 221 MISAYLGANNPGVSISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTF 280
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ +V TAL+D Y K + A +F+ + +N VT+ M++++ HG L L++
Sbjct: 281 LNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELFE 340
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
+M+ ++PD V FV +L C+ AGLV +G + MV +IKP+ H C+A++
Sbjct: 341 AMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANLYSSA 400
Query: 181 GRVVEAYEFVKQLGEDGNVMEI--WGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
G EA E +K L ++ E W ++L + + G LG+ +A+ L+ ET+ Y
Sbjct: 401 GFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLI--ETDPLNYKY 458
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVN 283
+ LL NIY+ G WE+V+RVR + E+ + + GC LV++ +V+
Sbjct: 459 YHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPGCGLVDLKEIVH 503
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 95/233 (40%), Gaps = 34/233 (14%)
Query: 27 IPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAEN 86
+P++ T S++ T + HG +I+H DQ + +L+ Y+ GA+ A+
Sbjct: 115 VPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKK 174
Query: 87 VF-------------------------------NRMPEKNSVTYTTMMMSYGQHGMGRRA 115
+F + MP+KN +++ M+ +Y +
Sbjct: 175 LFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVS 234
Query: 116 LTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD 175
++L+ M+R+G + + V +L+AC + + EG + S+++ + S + D
Sbjct: 235 ISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTF-LNSSVVIDTALID 293
Query: 176 MLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLS 228
M G+ V A L V W ++ A HG E G + E +++
Sbjct: 294 MYGKCKEVGLARRIFDSLSIRNKV--TWNVMILAHCLHGRPEGGLELFEAMIN 344
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 149 bits (376), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 148/277 (53%), Gaps = 5/277 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI G+ QNG +A+ + LL + P+ +T +S+L +C+ +I Q+ +
Sbjct: 313 MIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQAMVTKKG 372
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ +L+ +YS++G +S A F+ + E + V++T+++ + HG +L +++
Sbjct: 373 SADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEESLQMFE 432
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
SML+ ++PD + F+ +LSACS+ GLV EGL F+ M + +KI+ EHY C+ D+LGR
Sbjct: 433 SMLQK-LQPDKITFLEVLSACSHGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRA 491
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + EA + + + + + + + G C H E K A+KLL +E K V +
Sbjct: 492 GFIDEASDVLNSMPTEPSTHAL-AAFTGGCNIHEKRESMKWGAKKLLEIEPTKPVN--YS 548
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLH-KEMGCSLV 276
+LSN Y EG W +R + + K GCS +
Sbjct: 549 ILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 120/247 (48%), Gaps = 17/247 (6%)
Query: 1 MIAGYTQNGLNEKA--ILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR 58
+++ Y NG+ ++A +L L + ++ + T SS+L AC I Q+H +
Sbjct: 214 LVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFK 269
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
++ TAL++ Y+KS +S A F M +N V++ M++ + Q+G GR A+ L
Sbjct: 270 VSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRL 329
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADML- 177
+ ML ++PD + F ++LS+C+ + E ++ ++MV K + + VA+ L
Sbjct: 330 FGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQV-QAMV----TKKGSADFLSVANSLI 384
Query: 178 ---GRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKR 234
R G + EA + E V W S++GA +HG+ E + E +L +
Sbjct: 385 SSYSRNGNLSEALLCFHSIREPDLVS--WTSVIGALASHGFAEESLQMFESMLQKLQPDK 442
Query: 235 VAGYHVL 241
+ VL
Sbjct: 443 ITFLEVL 449
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 6/145 (4%)
Query: 18 LREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSK 77
L L V + V+ ++ C+ + ++ QLH ++ ++ + + T+LV Y K
Sbjct: 130 LSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESSCFPSTSLVHFYGK 189
Query: 78 SGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSM--LRSGIKPDAVAFV 135
G I A VF + +++ V + ++ SY +GM A L M ++ + D F
Sbjct: 190 CGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGSDKNRFRGDYFTFS 249
Query: 136 AILSACSYAGLVDEGLEIFESMVKI 160
++LSAC +++G +I + K+
Sbjct: 250 SLLSACR----IEQGKQIHAILFKV 270
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 147 bits (372), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 160/325 (49%), Gaps = 38/325 (11%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++ G T NG ++A+ + + P+ + +S+L A + + F Q+HG I+
Sbjct: 401 LVTGNTHNGSYDEALKLFCNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSG 460
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ +LV Y+K G++ A +FN M ++ +T+T +++ Y ++G
Sbjct: 461 FPSSLSVNNSLVTMYTKCGSLEDANVIFNSMEIRDLITWTCLIVGYAKNG---------- 510
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
L+++ F+SM ++ I P EHY C+ D+ GR
Sbjct: 511 -------------------------LLEDAQRYFDSMRTVYGITPGPEHYACMIDLFGRS 545
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G V+ + + Q+ + + +W +IL A + HG E G+ A+ L+ +E V +V
Sbjct: 546 GDFVKVEQLLHQMEVEPDAT-VWKAILAASRKHGNIENGERAAKTLMELEPNNAVP--YV 602
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
LSN+Y+ G + VR + + + KE GCS VE G V+ F+S D +HP+ EIY
Sbjct: 603 QLSNMYSAAGRQDEAANVRRLMKSRNISKEPGCSWVEEKGKVHSFMSEDRRHPRMVEIYS 662
Query: 301 ILDKLTMDIKDAGYKTRYNSSLNEI 325
+D++ + IK+AGY + +L+++
Sbjct: 663 KVDEMMLLIKEAGYFADMSFALHDL 687
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 103/215 (47%), Gaps = 4/215 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+GY ++G +A E + PN TL S+L C+S + Q+HG +I+
Sbjct: 96 LISGYCKSGSKVEAFNLFWEMQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTG 155
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMP-EKNSVTYTTMMMSYGQHGMGRRALTLY 119
D +V L+ Y++ IS AE +F M EKN+VT+T+M+ Y Q+G +A+ +
Sbjct: 156 FDLDVNVVNGLLAMYAQCKRISEAEYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECF 215
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
+ R G + + F ++L+AC+ G+++ +VK K + + DM +
Sbjct: 216 RDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVK-SGFKTNIYVQSALIDMYAK 274
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
+ A ++ + D V W S++ C G
Sbjct: 275 CREMESARALLEGMEVDDVVS--WNSMIVGCVRQG 307
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M+ GY+QNG KAI R+ N T S+L AC+S + Q+H ++
Sbjct: 198 MLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVGVQVHCCIVKSG 257
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
N+Y +AL+D Y+K + A + M + V++ +M++ + G+ AL+++
Sbjct: 258 FKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQGLIGEALSMFG 317
Query: 121 SMLRSGIKPDAVAFVAILSA 140
M +K D +IL+
Sbjct: 318 RMHERDMKIDDFTIPSILNC 337
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 1/160 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACS-STGSIAFATQLHGFSIRH 59
MI G + GL +A+ + + T+ SIL + S + A+ H ++
Sbjct: 299 MIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKT 358
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
ALVD Y+K G + A VF M EK+ +++T ++ +G AL L+
Sbjct: 359 GYATYKLVNNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLF 418
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
+M GI PD + ++LSA + L++ G ++ + +K
Sbjct: 419 CNMRVGGITPDKIVTASVLSASAELTLLEFGQQVHGNYIK 458
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 71/159 (44%), Gaps = 12/159 (7%)
Query: 62 DQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDS 121
+++ + ++ YS S +S AE +F P KN++++ ++ Y + G A L+
Sbjct: 56 ERDEFTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWE 115
Query: 122 MLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD----ML 177
M GIKP+ ++L C+ L+ G +I H IK + V + M
Sbjct: 116 MQSDGIKPNEYTLGSVLRMCTSLVLLLRGEQIHG-----HTIKTGFDLDVNVVNGLLAMY 170
Query: 178 GRVGRVVEA-YEFVKQLGEDGNVMEIWGSILGACKNHGY 215
+ R+ EA Y F GE NV W S+L +G+
Sbjct: 171 AQCKRISEAEYLFETMEGEKNNV--TWTSMLTGYSQNGF 207
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/330 (28%), Positives = 162/330 (49%), Gaps = 6/330 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALL-HKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+I GY +NGL +KA+ L K+ + V+L+ IL C + G Q+H ++++
Sbjct: 491 IIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKA 550
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
++ G +L+ Y+K A +FN M E + +++ +++ Y G AL L+
Sbjct: 551 GYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALW 610
Query: 120 DSMLRSGIKPDAVAFVAILSACSY--AGLVDEGLEIFESMVKIHKIKPSTEHYCCVADML 177
M IKPD + ++SA Y + + ++F SM I+ I+P+TEHY +L
Sbjct: 611 SRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVL 670
Query: 178 GRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAG 237
G G + EA + + + V + ++L +C+ H + K VA+ +LS T+
Sbjct: 671 GHWGLLEEAEDTINSMPVQPEV-SVLRALLDSCRIHSNTSVAKRVAKLILS--TKPETPS 727
Query: 238 YHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGE 297
++L SNIY+ G W + +R ++ E+G K S + ++ F +RD HPQ +
Sbjct: 728 EYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKD 787
Query: 298 IYDILDKLTMDIKDAGYKTRYNSSLNEIVE 327
IY L+ L M+ GY+ L E+ E
Sbjct: 788 IYRGLEILIMECLKVGYEPNTEYVLQEVDE 817
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 44/223 (19%)
Query: 29 NAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSK----------- 77
++ TLS++L +C+ + + +LHG +IR + Q + AL+ YSK
Sbjct: 284 DSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLY 343
Query: 78 -----SGAISYAE---------------NVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
A+++ E +F + EKN++TY +M + ++G G +AL
Sbjct: 344 EMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALK 403
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHK--IKPSTEHYCCVA- 174
L+ ML+ G++ + + + AC GLV E ++ E +IH IK T C+
Sbjct: 404 LFTDMLQRGVELTDFSLTSAVDAC---GLVSEK-KVSE---QIHGFCIKFGTAFNPCIQT 456
Query: 175 ---DMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
DM R R+ +A E Q + + + SI+G +G
Sbjct: 457 ALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNG 499
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 82/166 (49%), Gaps = 8/166 (4%)
Query: 1 MIAGYTQNGLNEKAI---LTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSI 57
+I+G+++ L +A+ +R+A L V PN T +IL AC + Q+HG +
Sbjct: 151 LISGFSRLNLEIEALKVFFRMRKAGL--VQPNEYTFVAILTACVRVSRFSLGIQIHGLIV 208
Query: 58 RHFMDQNVYAGTALVDTYSKSGAISYAE--NVFNRMPEKNSVTYTTMMMSYGQHGMGRRA 115
+ +V+ +L+ Y K S + +F+ +P+++ ++ T++ S + G +A
Sbjct: 209 KSGFLNSVFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKA 268
Query: 116 LTLYDSMLR-SGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKI 160
L+ M R G D+ +LS+C+ + ++ G E+ ++I
Sbjct: 269 FDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRI 314
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 3/156 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++AG+ +NG KA+ + L V +L+S + AC + Q+HGF I+
Sbjct: 388 LMAGFCRNGHGLKALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFG 447
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK--NSVTYTTMMMSYGQHGMGRRALTL 118
N TAL+D ++ ++ AE +F++ P +S T+++ Y ++G+ +A++L
Sbjct: 448 TAFNPCIQTALLDMCTRCERMADAEEMFDQWPSNLDSSKATTSIIGGYARNGLPDKAVSL 507
Query: 119 YD-SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEI 153
+ ++ + D V+ IL+ C G + G +I
Sbjct: 508 FHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQI 543
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 146/278 (52%), Gaps = 5/278 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IA Y +N ++A+ + P+ TL+S+L A + ++ Q+H ++
Sbjct: 380 IIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTV 439
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSV-TYTTMMMSYGQHGMGRRALTLY 119
+ +V AL+ YS+ G I + +F+ M K V T+ M+ Y HG AL L+
Sbjct: 440 I-PDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLF 498
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
SM +GI P + FV++L+AC++AGLVDE F SM+ ++KI+P EHY + ++
Sbjct: 499 GSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSG 558
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
G+ EA + + + + +WG++L AC+ + L V AE + +E E +
Sbjct: 559 QGQFEEAMYIITSMPFEPD-KTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTP--Y 615
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVE 277
VLL N+YA+ G W+ +VR + K + KE G S V+
Sbjct: 616 VLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWVD 653
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Query: 62 DQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDS 121
+++ ++ +V Y+ G + A + F + PEK++V++ +++ +Y ++ + A+ L+
Sbjct: 340 NRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIR 399
Query: 122 MLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVG 181
M G KPD ++LSA + GLV+ L + + + + P + + M R G
Sbjct: 400 MNIEGEKPDPHTLTSLLSAST--GLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCG 457
Query: 182 RVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
++E+ ++ V+ W +++G HG
Sbjct: 458 EIMESRRIFDEMKLKREVI-TWNAMIGGYAFHG 489
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 141 bits (355), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 156/312 (50%), Gaps = 5/312 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI Y+ + E A+ A+ V P+ T SS+L + ++ + +H I+
Sbjct: 307 MIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGADVHSLVIKLG 365
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
D + T+L++ Y K+G++ A VF + K+ + + T++M ++ +L +++
Sbjct: 366 FDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFN 425
Query: 121 SML-RSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
+L +KPD V + IL AC YAG V+EG++IF SM K H + P EHY C+ ++L R
Sbjct: 426 QLLMNQSLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCR 485
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYH 239
VG + EA + ++ + + IW IL A + G L + VA+ +L E+E + + +
Sbjct: 486 VGMINEAKDIADKIPFEPSS-HIWEPILCASLDLGDTRLAETVAKTML--ESEPKSSFPY 542
Query: 240 VLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIY 299
++L IY WEN ++R + E L G S + I V F + + +
Sbjct: 543 LVLIKIYEMTWRWENSVKLRYAMNEHKLKSAQGSSKISIESSVFSFEADQLQIHGGHDTC 602
Query: 300 DILDKLTMDIKD 311
+LD L+ D D
Sbjct: 603 ALLDLLSWDSFD 614
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 105/227 (46%), Gaps = 10/227 (4%)
Query: 25 KVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH-FMDQNVYAGTALVDTYSKSGAISY 83
++ P+ T+S ++ CS ++ Q I+ F+ ++ G +D +SK +
Sbjct: 230 EIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAG-IDMFSKCNRLDD 288
Query: 84 AENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSY 143
+ +F + + +SV +M+ SY H G AL L+ + ++PD F ++LS+ +
Sbjct: 289 SVKLFRELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMN- 347
Query: 144 AGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAY-EFVKQLGEDGNVMEI 202
A ++D G ++ ++K+ T + +M + G V A F K G+D +
Sbjct: 348 AVMLDHGADVHSLVIKL-GFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKD---LIF 403
Query: 203 WGS-ILGACKNHGYFELGKVVAEKLLSMETEK-RVAGYHVLLSNIYA 247
W + I+G +N E + + L++ + RV +L++ YA
Sbjct: 404 WNTVIMGLARNSRAVESLAIFNQLLMNQSLKPDRVTLMGILVACCYA 450
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 98/217 (45%), Gaps = 8/217 (3%)
Query: 27 IPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAEN 86
+P+++ S ++ + S A +H + + Y G + Y KSG++ A
Sbjct: 1 MPSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQ 60
Query: 87 VFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGL 146
+F+ +P+KN++T+ + ++G AL L+D M + D V++ ++S G
Sbjct: 61 LFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEM----PERDVVSWNTMISGLVSCGF 116
Query: 147 VDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSI 206
+ G+ +F M + +I+P+ + +A ++ V + + G + +W S+
Sbjct: 117 HEYGIRVFFDMQR-WEIRPTEFTFSILASLVTCVRHGEQIHGNAICSGVSRYNLVVWNSV 175
Query: 207 LGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLS 243
+ + G F+ V L+ME V+ ++LS
Sbjct: 176 MDMYRRLGVFDYALSV---FLTMEDRDVVSWNCLILS 209
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 91/210 (43%), Gaps = 16/210 (7%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSI--LPACSSTGSIAFATQLHGFSIR 58
MI+G G +E I + ++ P T S + L C G Q+HG +I
Sbjct: 107 MISGLVSCGFHEYGIRVFFDMQRWEIRPTEFTFSILASLVTCVRHGE-----QIHGNAIC 161
Query: 59 HFMDQ-NVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
+ + N+ +++D Y + G YA +VF M +++ V++ +++S G AL
Sbjct: 162 SGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCSDSGNKEVALD 221
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADML 177
+ M I+PD ++S CS + +G + +K+ + S + DM
Sbjct: 222 QFWLMREMEIQPDEYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGI-DMF 280
Query: 178 GRVGRVVEAYEFVKQLGEDGNVMEIWGSIL 207
+ R+ ++ + ++L E W S+L
Sbjct: 281 SKCNRLDDSVKLFREL-------EKWDSVL 303
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 133/246 (54%), Gaps = 5/246 (2%)
Query: 29 NAVTLSSILPACSST--GSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAEN 86
+ VTLS++L A S + S+ T +H +I+ +V +L+D Y+KSG +
Sbjct: 416 DEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNEVSRK 475
Query: 87 VFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGL 146
VF+ + N T+++ Y ++GMG + + M R + PD V +++LS CS++GL
Sbjct: 476 VFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCSHSGL 535
Query: 147 VDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSI 206
V+EG IF+S+ + I P + Y C+ D+LGR G V +A + Q D + + W S+
Sbjct: 536 VEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVA-WSSL 594
Query: 207 LGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKG 266
L +C+ H +G+ AE L+++E E ++ +S Y E G++E ++R +
Sbjct: 595 LQSCRIHRNETIGRRAAEVLMNLEPEN--FAVYIQVSKFYFEIGDFEISRQIREIAASRE 652
Query: 267 LHKEMG 272
L +E+G
Sbjct: 653 LMREIG 658
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 74/161 (45%), Gaps = 1/161 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++ + Q G +++ L V N +T ++ CS + QLH ++
Sbjct: 184 LLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSG 243
Query: 61 MD-QNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ N++ LVD YS G +S + FN +PEK+ +++ +++ +G +L L+
Sbjct: 244 WNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCADYGSVLDSLDLF 303
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKI 160
M G +P F++ L+ CS + G +I ++K+
Sbjct: 304 SKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKM 344
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 96/221 (43%), Gaps = 16/221 (7%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+G ++ G + +AI E + + +A T S+L CS Q+H I
Sbjct: 83 LISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLG 142
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
N++ +ALV Y+ + A +F+ M ++N ++ + Q G +R +Y
Sbjct: 143 FGCNMFVRSALVGLYACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYL 202
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK-------IHKIKPSTEHYCCV 173
M G+ + + + ++ CS+ LV EG ++ +VK I ++Y
Sbjct: 203 RMELEGVAKNGLTYCYMIRGCSHDRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSAC 262
Query: 174 ADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHG 214
D+ G + ++ V + +V+ W SI+ C ++G
Sbjct: 263 GDLSGS----MRSFNAVPE----KDVIS-WNSIVSVCADYG 294
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 40 CSSTGSIAFATQLHGFSIRHFMDQN----VYAGTALVDTYSKSGAISYAENVFNRMPEKN 95
CS T IA T FS F+++N VY +D KSG + A F+ M ++
Sbjct: 21 CSLTPFIA--TPRMDFS--SFLEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRD 76
Query: 96 SVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEI 153
VTY ++ ++G RA+ LY M+ G++ A F ++LS CS EG+++
Sbjct: 77 VVTYNLLISGNSRYGCSLRAIELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQV 134
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 127/234 (54%), Gaps = 7/234 (2%)
Query: 48 FATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYG 107
+ + +H + + +D V +AL+D YSK G + +AE +F MP KN + + M+ Y
Sbjct: 338 WGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGYA 397
Query: 108 QHGMGRRALTLYDSMLRSG-IKPDAVAFVAILSACSYAGLVDE-GLEIFESMVKIHKIKP 165
++G A+ L++ + + +KPD F+ +L+ CS+ + E L FE M+ ++IKP
Sbjct: 398 RNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIKP 457
Query: 166 STEHYCCVADMLGRVGRVVEAYEFVKQ--LGEDGNVMEIWGSILGACKNHGYFELGKVVA 223
S EH C + +G+ G V +A + +++ G DG W ++LGAC + K VA
Sbjct: 458 SVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVA---WRALLGACSARKDLKAAKTVA 514
Query: 224 EKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVE 277
K++ + + ++++SN+YA W V ++R + E G+ KE+G S ++
Sbjct: 515 AKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWID 568
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 2/192 (1%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
P+A L +L + G ++ QLHG+ +H N +L+ Y S ++ A V
Sbjct: 53 PDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKV 112
Query: 88 FNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLV 147
F+ MP+ + +++ +++ Y Q G + + L+ + RS + P+ +F A L+AC+ L
Sbjct: 113 FDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLS 172
Query: 148 DEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSIL 207
G I +VK+ K + C+ DM G+ G + +A + + E V W +I+
Sbjct: 173 PLGACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVS--WNAIV 230
Query: 208 GACKNHGYFELG 219
+C +G ELG
Sbjct: 231 ASCSRNGKLELG 242
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/247 (21%), Positives = 101/247 (40%), Gaps = 27/247 (10%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+++GY Q+G ++ I E V PN + ++ L AC+ +H ++
Sbjct: 127 LVSGYVQSGRFQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLG 186
Query: 61 MDQ-NVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+++ NV G L+D Y K G + A VF M EK++V++ ++ S ++G L +
Sbjct: 187 LEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFF 246
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
M PD V + ++ A +G + ++ M P++ + +
Sbjct: 247 HQM----PNPDTVTYNELIDAFVKSGDFNNAFQVLSDMP-----NPNSSSWNTILTGYVN 297
Query: 180 VGRVVEAYEFVKQLGEDGNVME-----------------IWGSILGACKNHGYFELGKVV 222
+ EA EF ++ G + WGS++ AC + + VV
Sbjct: 298 SEKSGEATEFFTKMHSSGVRFDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVV 357
Query: 223 AEKLLSM 229
A L+ M
Sbjct: 358 ASALIDM 364
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 125 bits (314), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 109/210 (51%), Gaps = 3/210 (1%)
Query: 2 IAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR-HF 60
IA +++ +E+ I + L + P+ T SIL CS + + +HG + F
Sbjct: 517 IAACSRSDYHEEVIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDF 576
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + L+D Y K G+I VF EKN +T+T ++ G HG G+ AL +
Sbjct: 577 SCADTFVCNVLIDMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFK 636
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
L G KPD V+F++IL+AC + G+V EG+ +F+ M K + ++P +HY C D+L R
Sbjct: 637 ETLSLGFKPDRVSFISILTACRHGGMVKEGMGLFQKM-KDYGVEPEMDHYRCAVDLLARN 695
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGAC 210
G + EA ++++ + +W + L C
Sbjct: 696 GYLKEAEHLIREMPFPADA-PVWRTFLDGC 724
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH- 59
+I GY++ G +KA E +PN T+S +L +C+S + TQLHG S+++
Sbjct: 86 IIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SCASL-DVRAGTQLHGLSLKYG 143
Query: 60 -FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTL 118
FM + + GT L+ Y + + AE VF MP K+ T+ MM G G + +
Sbjct: 144 LFM-ADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRGFLKECMFF 202
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
+ ++R G +F+ +L S +D ++ S K
Sbjct: 203 FRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATK 243
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 10/199 (5%)
Query: 35 SILPACSSTGSIAFATQLHGFSIR--HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMP 92
S+L C S A LH SI + Q VY ++ Y K G +S A VF++MP
Sbjct: 17 SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMP 76
Query: 93 EKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLE 152
E+N V++ T++ Y ++G +A ++ M G P+ +LS S V G +
Sbjct: 77 ERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLSCASLD--VRAGTQ 134
Query: 153 IFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNV--MEIWGSILGAC 210
+ +K C+ + GR ++ E +Q+ ED +E W ++
Sbjct: 135 LHGLSLKYGLFMADAFVGTCLLCLYGR----LDLLEMAEQVFEDMPFKSLETWNHMMSLL 190
Query: 211 KNHGYFELGKVVAEKLLSM 229
+ G+ + +L+ M
Sbjct: 191 GHRGFLKECMFFFRELVRM 209
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 1/118 (0%)
Query: 24 HKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISY 83
H PN T S+L S ++ Q+HG I++ + + G AL+D Y+K G +
Sbjct: 310 HGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLED 369
Query: 84 AENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSAC 141
+ F+ + +KN V + ++ Y G L+L+ ML+ G +P F L +C
Sbjct: 370 SRLCFDYIRDKNIVCWNALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSC 426
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 113/206 (54%), Gaps = 1/206 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI Y +N ++A R + V PN T+ ++L A + GS++ +H ++ ++
Sbjct: 222 MITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAHKNG 281
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY- 119
+ + GTAL+D YSK G++ A VF+ M K+ T+ +M+ S G HG G AL+L+
Sbjct: 282 FVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEALSLFE 341
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
+ + ++PDA+ FV +LSAC+ G V +GL F M++++ I P EH C+ +L +
Sbjct: 342 EMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMIQVYGISPIREHNACMIQLLEQ 401
Query: 180 VGRVVEAYEFVKQLGEDGNVMEIWGS 205
V +A V+ + D + +G+
Sbjct: 402 ALEVEKASNLVESMDSDPDFNSSFGN 427
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 19 REALL--------HKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTA 70
REALL H+ + T ++ AC ++ SI TQ+HG +I+ +V+
Sbjct: 100 REALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNT 159
Query: 71 LVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPD 130
L+D Y K G VF++MP ++ V++TTM+ + A +++ M +
Sbjct: 160 LMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNV--- 216
Query: 131 AVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPS 166
V++ A+++A DE ++F M ++ +KP+
Sbjct: 217 -VSWTAMITAYVKNRRPDEAFQLFRRM-QVDDVKPN 250
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 98/186 (52%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI Y +N I R LL K P++VT+ +L CS ++ +LHG ++
Sbjct: 490 MIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILKKE 549
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ + ++ Y K G + A F+ + K S+T+T ++ +YG + + R A+ ++
Sbjct: 550 FESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEAYGCNELFRDAINCFE 609
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M+ G P+ F A+LS CS AG VDE F M++++ ++PS EHY V ++L R
Sbjct: 610 QMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQPSEEHYSLVIELLNRC 669
Query: 181 GRVVEA 186
GRV EA
Sbjct: 670 GRVEEA 675
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 85/159 (53%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+++GY NG ++A+ ++ P+ VT++++LP C+ +I ++H +++++
Sbjct: 389 LMSGYAANGRFDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNL 448
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
NV T+L+ YSK G Y +F+R+ ++N +T M+ Y ++ R + ++
Sbjct: 449 FLPNVSLVTSLMVMYSKCGVPEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFR 508
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
ML S +PD+V +L+ CS + G E+ ++K
Sbjct: 509 LMLLSKHRPDSVTMGRVLTVCSDLKALKLGKELHGHILK 547
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 4/156 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLH-KVIPNAVTLSSILPACSSTGSIAFATQLHGFSIR- 58
MIAG N +A+ R + K+ PN+V L++ILP ++ ++H ++
Sbjct: 286 MIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKS 345
Query: 59 -HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALT 117
++++Q + + L+D Y K G ++ VF ++N++++T +M Y +G +AL
Sbjct: 346 KNYVEQP-FVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALR 404
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEI 153
M + G +PD V +L C+ + +G EI
Sbjct: 405 SIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEI 440
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Query: 29 NAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVF 88
N +LS++ + + ++ + H +I++ + +V+ T+LVD Y K G + A VF
Sbjct: 213 NVYSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVF 272
Query: 89 NRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSML-RSGIKPDAVAFVAILSACSYAGLV 147
+ + E++ V + M+ + AL L+ +M+ I P++V IL +
Sbjct: 273 DEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKAL 332
Query: 148 DEGLEIFESMVK 159
G E+ ++K
Sbjct: 333 KLGKEVHAHVLK 344
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 13/246 (5%)
Query: 11 NEKAILTLREALLHKVIP-NAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGT 69
N + LT+ + L + IP NA T S++L AC S+ Q+H + ++ N + T
Sbjct: 91 NLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRT 150
Query: 70 ALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGR--RALTLYDSMLRSGI 127
LV Y+ G++ A+ VF+ N ++ ++ G R L+ + M G+
Sbjct: 151 KLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGV 210
Query: 128 KPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAY 187
+ + + + + A + +GL+ +K + + S + DM + G+V A
Sbjct: 211 DLNVYSLSNVFKSFAGASALRQGLKTHALAIK-NGLFNSVFLKTSLVDMYFKCGKVGLAR 269
Query: 188 EFVKQLGEDGNVMEIWGS-ILGACKNHGYFE-LGKVVAEKLLSMETEKRVAGYHVLLSNI 245
++ E V +WG+ I G N +E LG +M +E+++ V+L+ I
Sbjct: 270 RVFDEIVERDIV--VWGAMIAGLAHNKRQWEALG-----LFRTMISEEKIYPNSVILTTI 322
Query: 246 YAEEGE 251
G+
Sbjct: 323 LPVLGD 328
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 117/228 (51%), Gaps = 2/228 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++ G + G +E+A L+ E + + P+ TL+++L C++ ++ +HGF IR
Sbjct: 468 LLTGVARVGRSEQA-LSFFEGMQVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDG 526
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+V A+VD YSK YA VF ++ + + +++ ++G + L+
Sbjct: 527 YKIDVVIRGAMVDMYSKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFM 586
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
+ G+KPD V F+ IL AC G V+ G + F SM + I P EHY C+ ++ +
Sbjct: 587 LLENEGVKPDHVTFLGILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKY 646
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLS 228
G + + EF+ + D M++ I AC+ + + +LG A++L++
Sbjct: 647 GCLHQLEEFLLLMPFDPP-MQMLTRINDACQRYRWSKLGAWAAKRLMN 693
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 102/236 (43%), Gaps = 14/236 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNA--VTLSSILPACSSTGSIAFATQLHGFSIR 58
M+ GY ++A+ L L+ + I N VTL IL CS + Q HGF R
Sbjct: 366 MLGGYVHAHEWDEALDFL--TLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYR 423
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPE-KNSVTYTTMMMSYGQHGMGRRALT 117
H D NV AL+D Y K G + A F +M E ++ V++ ++ + G +AL+
Sbjct: 424 HGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALS 483
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKI-HKIKPSTEHYCCVADM 176
++ M + KP +L+ C+ ++ G I +++ +KI + DM
Sbjct: 484 FFEGM-QVEAKPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRG--AMVDM 540
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETE 232
+ A E K+ ++ W SI+ C +G K V E + +E E
Sbjct: 541 YSKCRCFDYAIEVFKEAATRDLIL--WNSIIRGCCRNGR---SKEVFELFMLLENE 591
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 105/254 (41%), Gaps = 10/254 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I QNG++++ R V + + +L +C + QLH +++
Sbjct: 133 VITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYG 192
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
NV T++VD Y K +S A VF+ + + V++ ++ Y + G A+ ++
Sbjct: 193 YSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFF 252
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
ML ++P +++ ACS + ++ G I VK+ + T V DM +
Sbjct: 253 KMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKL-SVVADTVVSTSVFDMYVKC 311
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVV-AEKLLSMETEKRVAGYH 239
R+ A Q ++ W S + GY G A +L + E+ + ++
Sbjct: 312 DRLESARRVFDQTRSKD--LKSWTSAMS-----GYAMSGLTREARELFDLMPERNIVSWN 364
Query: 240 VLLSNIYAEEGEWE 253
+L Y EW+
Sbjct: 365 AMLGG-YVHAHEWD 377
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 148/325 (45%), Gaps = 20/325 (6%)
Query: 4 GYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHG---FSIRHF 60
+ ++G +KA+ T+ + + L + C + A +HG S+ H
Sbjct: 228 AFCKHGKVKKALYTIDILASMNYVVDLSRLLRLAKICGEAEGLQEAKTVHGKISASVSHL 287
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
++ + L++ YS G + A +VF +M EKN T+ ++ + ++G G A+ ++
Sbjct: 288 ---DLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETWCIIIRCFAKNGFGEDAIDMFS 344
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
G PD F I AC G VDEGL FESM + + I PS E Y + +M
Sbjct: 345 RFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSRDYGIAPSIEDYVSLVEMYALP 404
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHV 240
G + EA EFV+++ + NV ++W +++ + HG ELG AE + ++ +
Sbjct: 405 GFLDEALEFVERMPMEPNV-DVWETLMNLSRVHGNLELGDYCAEVVEFLDPTRL------ 457
Query: 241 LLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
N + EG V+ EK K+ L + + F + D P++ E++
Sbjct: 458 ---NKQSREG----FIPVKASDVEKESLKKRSGILHGVKSSMQEFRAGDTNLPENDELFQ 510
Query: 301 ILDKLTMDIKDAGYKTRYNSSLNEI 325
+L L M + + GY +L++I
Sbjct: 511 LLRNLKMHMVEVGYVAETRMALHDI 535
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 92/163 (56%), Gaps = 1/163 (0%)
Query: 71 LVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPD 130
+++ YS + A NVFN MP++NS T+ TM+ ++G G RA+ ++ + G KPD
Sbjct: 149 VIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPD 208
Query: 131 AVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFV 190
F A+ AC G ++EGL FESM + + + S E Y V +ML G + EA +FV
Sbjct: 209 KEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHLDEALDFV 268
Query: 191 KQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEK 233
+++ + +V E+W +++ C GY ELG AE + ++ +
Sbjct: 269 ERMTVEPSV-EMWETLMNLCWVQGYLELGDRFAELIKKLDASR 310
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 133/312 (42%), Gaps = 37/312 (11%)
Query: 29 NAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVF 88
+ + L + C ++ A +H I +V A A+++ YS ++ A VF
Sbjct: 118 DLIRLLGLAKLCGKPEALEAARVVHECIIALVSPCDVGARNAIIEMYSGCCSVDDALKVF 177
Query: 89 NRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVD 148
MPE NS T MM + +G G A+ L+ G KP+ F + S C+ G V
Sbjct: 178 EEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFKEEGNKPNGEIFNQVFSTCTLTGDVK 237
Query: 149 EGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILG 208
EG F++M + + I PS EHY V ML G + EA FV+++ + +V ++W +++
Sbjct: 238 EGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHLDEALNFVERMPMEPSV-DVWETLMN 296
Query: 209 ACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVR-NQITEKGL 267
+ HG ELG AE + E +D R ++++ GL
Sbjct: 297 LSRVHGDVELGDRCAELV--------------------------EKLDATRLDKVSSAGL 330
Query: 268 HKEMGCSLVEIGGLVN---YFVSR----DEKHPQSGEIYDILDKLTMDIKDAGY--KTRY 318
V+ YF S D HPQ IY+ L L +K+ GY TRY
Sbjct: 331 VATKASDFVKKEPSTRSEPYFYSTFRPVDSSHPQMNIIYETLMSLRSQLKEMGYVPDTRY 390
Query: 319 NSSLNEIVETVE 330
SL +E E
Sbjct: 391 YRSLIMAMENKE 402
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 113/215 (52%), Gaps = 3/215 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+ ++ G KAI L H +PN T+ SIL ACS ++ F Q+H ++
Sbjct: 255 VISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHSLVVKRM 314
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+ +V+ GT+L+D Y+K G IS VF+ M +N+VT+T+++ ++ + G G A++L+
Sbjct: 315 IKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFR 374
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M R + + + V+IL AC G + G E+ ++K + I+ + + + +
Sbjct: 375 IMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIK-NSIEKNVYIGSTLVWLYCKC 433
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGY 215
G +A+ ++QL V W +++ C + G+
Sbjct: 434 GESRDAFNVLQQLPSRDVVS--WTAMISGCSSLGH 466
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/152 (36%), Positives = 83/152 (54%), Gaps = 1/152 (0%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+G + G +A+ L+E + V PN T SS L AC+++ S+ +H + ++
Sbjct: 457 MISGCSSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNH 516
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
NV+ G+AL+ Y+K G +S A VF+ MPEKN V++ M+M Y ++G R AL L
Sbjct: 517 ALSNVFVGSALIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMY 576
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLE 152
M G + D F ILS C L DE +E
Sbjct: 577 RMEAEGFEVDDYIFATILSTCGDIEL-DEAVE 607
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 104/215 (48%), Gaps = 8/215 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+IA + + G E+AI R +I N +T+ SIL AC S G++ +LH I++
Sbjct: 356 IIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNS 415
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYD 120
+++NVY G+ LV Y K G A NV ++P ++ V++T M+ G AL
Sbjct: 416 IEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLK 475
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHY---CCVADML 177
M++ G++P+ + + L AC+ + E L I S+ I K + + + M
Sbjct: 476 EMIQEGVEPNPFTYSSALKACANS----ESLLIGRSIHSIAKKNHALSNVFVGSALIHMY 531
Query: 178 GRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKN 212
+ G V EA+ + E N++ I+G +N
Sbjct: 532 AKCGFVSEAFRVFDSMPEK-NLVSWKAMIMGYARN 565
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 98/187 (52%), Gaps = 13/187 (6%)
Query: 42 STGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTT 101
S+ + ++H +++ F DQ +Y G L+ + + G + YA VF+ MPEKN+VT+T
Sbjct: 94 SSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTA 153
Query: 102 MMMSYGQHGMGRRALTLYDSMLRSGIK-PDAVAFVAILSACSYAGLVDEGLEIFESMVKI 160
M+ Y ++G+ A L++ ++ GI+ + FV +L+ CS + G ++ +MVK+
Sbjct: 154 MIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKV 213
Query: 161 ---HKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGAC--KNHGY 215
+ I S+ Y G + + A++ + E+ +V+ W +++ AC K HG
Sbjct: 214 GVGNLIVESSLVY--FYAQCGELTSALRAFDMM----EEKDVIS-WTAVISACSRKGHGI 266
Query: 216 FELGKVV 222
+G +
Sbjct: 267 KAIGMFI 273
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 111/216 (51%), Gaps = 1/216 (0%)
Query: 20 EALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSG 79
E L +P+ + +C++ S+ + ++H ++ + ++ + +
Sbjct: 226 ELLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECS 285
Query: 80 AISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILS 139
+I+ A+ VF+ M +K+ ++ MM +Y +GMG AL L++ M + G+KP+ F+ +
Sbjct: 286 SITDAKRVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 140 ACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNV 199
AC+ G ++E F+SM H I P TEHY V +LG+ G +VEA ++++ L +
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTA 405
Query: 200 MEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRV 235
+ W ++ + HG +L + E ++ ++ K V
Sbjct: 406 -DFWEAMRNYARLHGDIDLEDYMEELMVDVDPSKAV 440
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 96/198 (48%), Gaps = 3/198 (1%)
Query: 36 ILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKN 95
I C ++ A +H F ++ A ++++ YS G++ A VFN MPE+N
Sbjct: 187 IAQLCGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERN 246
Query: 96 SVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFE 155
T+ ++ + ++G G A+ + + G KPD F I AC G ++EGL FE
Sbjct: 247 LETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFE 306
Query: 156 SMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGY 215
SM K + I P EHY + ML G + EA FV+ + + +++W +++ + HG
Sbjct: 307 SMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESMEPN---VDLWETLMNLSRVHGD 363
Query: 216 FELGKVVAEKLLSMETEK 233
LG + + ++ +
Sbjct: 364 LILGDRCQDMVEQLDASR 381
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 93/178 (52%), Gaps = 7/178 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLH-KVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+IAGY NG AI + + + P+ VT+ S+L AC + + + ++
Sbjct: 368 LIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKN 427
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+ N +L+ Y++ G + A+ VF+ M E++ V+Y T+ ++ +G G L L
Sbjct: 428 QIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLL 487
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADML 177
M GI+PD V + ++L+AC+ AGL+ EG IF+S+ P +HY C+ D+L
Sbjct: 488 SKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM-DLL 539
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 98/194 (50%), Gaps = 15/194 (7%)
Query: 62 DQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDS 121
+ +V + T ++ ++K + A F+RMPEK+ V++ M+ Y Q+G AL L++
Sbjct: 195 ENDVVSWTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFND 254
Query: 122 MLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKI---HKIKPSTEHYCCVADMLG 178
MLR G++P+ +V ++SACS+ D L S+VK+ +++ + + DM
Sbjct: 255 MLRLGVRPNETTWVIVISACSFRA--DPSLT--RSLVKLIDEKRVRLNCFVKTALLDMHA 310
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKV-VAEKLLSMETEKRVAG 237
+ + A +LG N++ W +++ GY +G + A +L ++ V
Sbjct: 311 KCRDIQSARRIFNELGTQRNLV-TWNAMIS-----GYTRIGDMSSARQLFDTMPKRNVVS 364
Query: 238 YHVLLSNIYAEEGE 251
++ L++ YA G+
Sbjct: 365 WNSLIAG-YAHNGQ 377
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 34/228 (14%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M++GY QNG E A+ + L V PN T ++ ACS + L
Sbjct: 235 MLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKR 294
Query: 61 MDQNVYAGTALVDT--------------------------------YSKSGAISYAENVF 88
+ N + TAL+D Y++ G +S A +F
Sbjct: 295 VRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLF 354
Query: 89 NRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSG-IKPDAVAFVAILSACSYAGLV 147
+ MP++N V++ +++ Y +G A+ ++ M+ G KPD V +++LSAC + +
Sbjct: 355 DTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADL 414
Query: 148 DEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGE 195
+ G I + + K ++IK + Y + M R G + EA ++ E
Sbjct: 415 ELGDCIVDYIRK-NQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKE 461
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 135/293 (46%), Gaps = 22/293 (7%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
PN VT + ++ G + A L+ R M NV TAL+D + K G + AE +
Sbjct: 196 PNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEM 255
Query: 88 FNRM----PEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSY 143
++RM E NS+ YTT++ + Q G A+ ML G++ D A+ I+S
Sbjct: 256 YSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCG 315
Query: 144 AGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDG---NVM 200
G + E EI E M K + P + + + + GR+ A +L E G +V+
Sbjct: 316 NGKLKEATEIVEDMEK-SDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVV 374
Query: 201 EIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRN 260
+ I G KN G+ + E ++ EK + +L + +EG++ V+R+ +
Sbjct: 375 ALSTMIDGIAKN------GQ-LHEAIVYFCIEKANDVMYTVLIDALCKEGDFIEVERLFS 427
Query: 261 QITEKGL--HKEMGCS----LVEIGGLVNYFVSRDEKHPQSGEIYDILDKLTM 307
+I+E GL K M S L + G LV+ F + + Q G + D+L T+
Sbjct: 428 KISEAGLVPDKFMYTSWIAGLCKQGNLVDAFKLK-TRMVQEGLLLDLLAYTTL 479
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 131/274 (47%), Gaps = 13/274 (4%)
Query: 7 QNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVY 66
+ GL+E A L+ + ++P++ + ++ A + L F+ H + N
Sbjct: 434 KGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAA--LYEEALVAFNTMHEVGSNPS 491
Query: 67 AGT--ALVDTYSKSGAISYAENVFNRMPE----KNSVTYTTMMMSYGQHGMGRRALTLYD 120
T +L+ ++++ G + +E + +R+ + +N T+ + +Y Q G A+ Y
Sbjct: 492 IETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYV 551
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M +S PD A+LS S+A LVDE E FE M K I PS YC + + G+
Sbjct: 552 DMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEM-KASDILPSIMCYCMMLAVYGKT 610
Query: 181 GRVVEAYEFVKQLGED--GNVMEIWGSIL-GACKNHGYFELGKVVAEKLLSMETEKRVAG 237
R + E ++++ + N+ ++ G ++ G + +++ + V +KL S +
Sbjct: 611 ERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEGCGLGIRF 670
Query: 238 YHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEM 271
Y+ LL ++ G+ E RV N+ T++GL E+
Sbjct: 671 YNALLDALWW-LGQKERAARVLNEATKRGLFPEL 703
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 112/232 (48%), Gaps = 11/232 (4%)
Query: 63 QNVYAGTALVDTYSKSGAISYAENVFNRMP-EKNS---VTYTTMMMSYGQHGMGRRALT- 117
++V++ TAL++ Y ++G + + +RM EK S +TY T++ + + G+ L
Sbjct: 174 RSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLG 233
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADML 177
L+ M GI+PD V + +LSAC+ GL DE +F +M I P Y + +
Sbjct: 234 LFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM-NDGGIVPDLTTYSHLVETF 292
Query: 178 GRVGRVVEAYEFVKQLGEDGNVMEI--WGSILGACKNHGYFELGKVVAEKLLSMETEKRV 235
G++ R+ + + + ++ G++ +I + +L A G + V ++ +
Sbjct: 293 GKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNA 352
Query: 236 AGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCS--LVEIGGLVNYF 285
Y VLL N++ + G +++V ++ ++ + L+E+ G YF
Sbjct: 353 NTYSVLL-NLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYF 403
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 15/169 (8%)
Query: 27 IPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMD-----QNVYAGTALVDTYSKSGAI 81
+P+ + + +L A + +GSI A + H M N + L++ + +SG
Sbjct: 314 LPDITSYNVLLEAYAKSGSIKEA-----MGVFHQMQAAGCTPNANTYSVLLNLFGQSGRY 368
Query: 82 SYAENVFNRMPEKNS----VTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAI 137
+F M N+ TY ++ +G+ G + +TL+ M+ I+PD + I
Sbjct: 369 DDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGI 428
Query: 138 LSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEA 186
+ AC GL ++ +I + M + I PS++ Y V + G+ EA
Sbjct: 429 IFACGKGGLHEDARKILQYMTA-NDIVPSSKAYTGVIEAFGQAALYEEA 476
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 92/199 (46%), Gaps = 12/199 (6%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFS-IRH 59
+I Y +NG E ++ L K+ P+ +T ++++ AC+ G + + L F+ +RH
Sbjct: 182 LINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACAR-GGLDWEGLLGLFAEMRH 240
Query: 60 -FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSV----TYTTMMMSYGQHGMGRR 114
+ ++ L+ + G AE VF M + V TY+ ++ ++G+ +
Sbjct: 241 EGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEK 300
Query: 115 ALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVA 174
L M G PD ++ +L A + +G + E + +F M + P+ Y +
Sbjct: 301 VCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM-QAAGCTPNANTYSVLL 359
Query: 175 DMLGRVGRVVEAYEFVKQL 193
++ G+ GR Y+ V+QL
Sbjct: 360 NLFGQSGR----YDDVRQL 374
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%), Gaps = 8/220 (3%)
Query: 57 IRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK----NSVTYTTMMMSYGQHGMG 112
+ F +V+A AL++ + K I A V +RM K ++VTY M+ S G
Sbjct: 150 LEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKL 209
Query: 113 RRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCC 172
AL + + +L +P + + ++ A G VDE L++ + M+ +KP Y
Sbjct: 210 DLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLS-RGLKPDMFTYNT 268
Query: 173 VADMLGRVGRVVEAYEFVKQLGEDGNVMEI--WGSILGACKNHGYFELGKVVAEKLLSME 230
+ + + G V A+E V+ L G ++ + +L A N G +E G+ + K+ S +
Sbjct: 269 IIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328
Query: 231 TEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKE 270
+ V Y +L++ + +G+ E + + EKGL +
Sbjct: 329 CDPNVVTYSILITTL-CRDGKIEEAMNLLKLMKEKGLTPD 367
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 87/201 (43%), Gaps = 5/201 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I ++G E+A+ L+ + P+A + ++ A G + A + I
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 398
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPE----KNSVTYTTMMMSYGQHGMGRRAL 116
++ ++ T K+G A +F ++ E NS +Y TM + G RAL
Sbjct: 399 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 458
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
+ M+ +GI PD + + +++S G+VDE E+ M + + PS Y V
Sbjct: 459 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM-RSCEFHPSVVTYNIVLLG 517
Query: 177 LGRVGRVVEAYEFVKQLGEDG 197
+ R+ +A ++ + +G
Sbjct: 518 FCKAHRIEDAINVLESMVGNG 538
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 1/111 (0%)
Query: 87 VFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGL 146
+F+ + N VTY+ ++ + + G A+ L M G+ PDA ++ +++A G
Sbjct: 324 MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR 383
Query: 147 VDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDG 197
+D +E E+M+ P +Y V L + G+ +A E +LGE G
Sbjct: 384 LDVAIEFLETMIS-DGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 118/265 (44%), Gaps = 27/265 (10%)
Query: 9 GLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAG 68
G EKA +RE + IP+ T S +L + + A L R + +VY
Sbjct: 462 GKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 69 TALVDTYSKSGAISYAENVFNRMPE----KNSVTYTTMMMSYGQHGMGRRALTLYDSMLR 124
T +VD++ K+G I A FN M E N VTYT ++ +Y + A L+++ML
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581
Query: 125 SGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVV 184
G P+ V + A++ AG V++ +IFE M + P + Y
Sbjct: 582 EGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDV-PDVDMY-------------- 626
Query: 185 EAYEFVKQLGEDGNVMEIWGSIL-GACKNHGYFELGKVVAEKLLSME-TEKRVAGYHVLL 242
++ E NV+ +G++L G CK+H E K++ +SME E Y L+
Sbjct: 627 --FKQYDDNSERPNVV-TYGALLDGFCKSHRVEEARKLL--DAMSMEGCEPNQIVYDALI 681
Query: 243 SNIYAEEGEWENVDRVRNQITEKGL 267
+ + G+ + V+ +++E G
Sbjct: 682 DGL-CKVGKLDEAQEVKTEMSEHGF 705
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 107/257 (41%), Gaps = 31/257 (12%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
M+ + + GL E+A E PN VT ++++ A +++A +L +
Sbjct: 524 MVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEG 583
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRM------PE--------------KNSVTYT 100
N+ +AL+D + K+G + A +F RM P+ N VTY
Sbjct: 584 CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYG 643
Query: 101 TMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKI 160
++ + + A L D+M G +P+ + + A++ G +DE E+ M +
Sbjct: 644 ALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSE- 702
Query: 161 HKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDG---NVMEIWGSILGACKNHGYFE 217
H + Y + D +V R A + + ++ E+ NV+ I G CK
Sbjct: 703 HGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK------ 756
Query: 218 LGKV-VAEKLLSMETEK 233
+GK A KL+ M EK
Sbjct: 757 VGKTDEAYKLMQMMEEK 773
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 115/239 (48%), Gaps = 11/239 (4%)
Query: 12 EKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTAL 71
+ A+ +E + PN VT SS++ + G + A++L I ++ +V+ +AL
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332
Query: 72 VDTYSKSGAISYAENVFNRMPEK----NSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGI 127
+D + K G + AE +++ M ++ + VTY++++ + H A +++ M+
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 392
Query: 128 KPDAVAFVAILSA-CSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEA 186
PD V + ++ C Y V+EG+E+F M + + +T Y + L + G A
Sbjct: 393 FPDVVTYNTLIKGFCKYKR-VEEGMEVFREMSQ-RGLVGNTVTYNILIQGLFQAGDCDMA 450
Query: 187 YEFVKQLGEDG---NVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLL 242
E K++ DG N+M + G CKN G E VV E L + E + Y++++
Sbjct: 451 QEIFKEMVSDGVPPNIMTYNTLLDGLCKN-GKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 126/284 (44%), Gaps = 15/284 (5%)
Query: 15 ILTLREALLHKVIPNAVTLSSILPACSSTGS-IAFATQLHGFSIRHFMDQNVYAGTALVD 73
+++L E + + IP+ SIL C S + A + G ++ + N+ ++L++
Sbjct: 100 VISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLN 159
Query: 74 TYSKSGAISYAENVFNRMP----EKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKP 129
Y S IS A + ++M + N+VT+ T++ H A+ L D M+ G +P
Sbjct: 160 GYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQP 219
Query: 130 DAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEF 189
D V + +++ G D + M + K++P Y + D L + + +A
Sbjct: 220 DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQ-GKLEPGVLIYNTIIDGLCKYKHMDDALNL 278
Query: 190 VKQLGEDG---NVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIY 246
K++ G NV+ + S++ N+G + + ++ + V + L+ + +
Sbjct: 279 FKEMETKGIRPNVV-TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALI-DAF 336
Query: 247 AEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDE 290
+EG+ +++ +++ ++ + S+V L+N F D
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSIDP----SIVTYSSLINGFCMHDR 376
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/280 (22%), Positives = 123/280 (43%), Gaps = 9/280 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI GY + G +KA+ LR+ + +T +++ AC + L+
Sbjct: 263 MIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKG 322
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK----NSVTYTTMMMSYGQHGMGRRAL 116
+ +A + ++ K G ++ VF M K N YT ++ Y + G A+
Sbjct: 323 IQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAI 382
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
L M+ G KPD V + +++ G V+E L+ F + + + ++ Y + D
Sbjct: 383 RLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHT-CRFDGLAINSMFYSSLIDG 441
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVME--IWGSILGACKNHGYFELGKVVAEKLLSME-TEK 233
LG+ GRV EA +++ E G + + +++ A H + + +++ E ++
Sbjct: 442 LGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQ 501
Query: 234 RVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGC 273
V Y +LLS ++ E E + ++ + + +KG+ C
Sbjct: 502 TVYTYTILLSGMFKEHRNEEAL-KLWDMMIDKGITPTAAC 540
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 90/213 (42%), Gaps = 13/213 (6%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++ G +NG E+A+ + N++ SS++ G + A +L
Sbjct: 403 VVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKG 462
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSV-----TYTTMMMSYGQHGMGRRA 115
++ Y AL+D ++K + A +F RM E+ TYT ++ + A
Sbjct: 463 CTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEA 522
Query: 116 LTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCC--V 173
L L+D M+ GI P A F A+ + +G V +I + + + I + C +
Sbjct: 523 LKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGVILDAA----CEDM 578
Query: 174 ADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSI 206
+ L + GR+ EA + + E G E+ G I
Sbjct: 579 INTLCKAGRIKEACKLADGITERGR--EVPGRI 609
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 109/225 (48%), Gaps = 13/225 (5%)
Query: 65 VYAGTALVDTYSKSGAISYAENVFNRMPE----KNSVTYTTMMMSYGQHGMG-RRALTLY 119
VYA +AL+ Y +SG A +VFN M E N VTY ++ + G+ GM ++ +
Sbjct: 268 VYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFF 327
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
D M R+G++PD + F ++L+ CS GL + +F+ M +I+ Y + D + +
Sbjct: 328 DEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTN-RRIEQDVFSYNTLLDAICK 386
Query: 180 VGRVVEAYEFVKQLGED---GNVMEIWGSILGACKNHGYFELGKVVAE-KLLSMETEKRV 235
G++ A+E + Q+ NV+ I G K + E + E + L + ++
Sbjct: 387 GGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDR-- 444
Query: 236 AGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGG 280
Y+ LLS IY + G E + ++ G+ K++ +GG
Sbjct: 445 VSYNTLLS-IYTKVGRSEEALDILREMASVGIKKDVVTYNALLGG 488
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 9/172 (5%)
Query: 26 VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAE 85
V P+ +T +S+L CS G A L ++Q+V++ L+D K G + A
Sbjct: 335 VQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAF 394
Query: 86 NVFNRMPEK----NSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSAC 141
+ +MP K N V+Y+T++ + + G AL L+ M GI D V++ +LS
Sbjct: 395 EILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIY 454
Query: 142 SYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQL 193
+ G +E L+I M + IK Y + G+ G+ Y+ VK++
Sbjct: 455 TKVGRSEEALDILREMASV-GIKKDVVTYNALLGGYGKQGK----YDEVKKV 501
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 107/233 (45%), Gaps = 11/233 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFS--IR 58
+I+ Y ++GL+E+AI + + PN VT ++++ AC G + F F R
Sbjct: 274 LISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGK-GGMEFKQVAKFFDEMQR 332
Query: 59 HFMDQNVYAGTALVDTYSKSGAISYAENVF----NRMPEKNSVTYTTMMMSYGQHGMGRR 114
+ + + +L+ S+ G A N+F NR E++ +Y T++ + + G
Sbjct: 333 NGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDL 392
Query: 115 ALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVA 174
A + M I P+ V++ ++ + AG DE L +F M + I Y +
Sbjct: 393 AFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM-RYLGIALDRVSYNTLL 451
Query: 175 DMLGRVGRVVEAYEFVKQLGEDGNVMEI--WGSILGACKNHG-YFELGKVVAE 224
+ +VGR EA + ++++ G ++ + ++LG G Y E+ KV E
Sbjct: 452 SIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTE 504
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 100/220 (45%), Gaps = 10/220 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQ-LHGFSIRH 59
++A ++ GL E A E ++ + + +++L A G + A + L ++
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKR 404
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMP----EKNSVTYTTMMMSYGQHGMGRRA 115
M NV + + ++D ++K+G A N+F M + V+Y T++ Y + G A
Sbjct: 405 IM-PNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEA 463
Query: 116 LTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD 175
L + M GIK D V + A+L G DE ++F M + H + P+ Y + D
Sbjct: 464 LDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH-VLPNLLTYSTLID 522
Query: 176 MLGRVGRVVEAYEFVKQLGEDGNVMEI--WGSILGA-CKN 212
+ G EA E ++ G ++ + +++ A CKN
Sbjct: 523 GYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKN 562
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 110/246 (44%), Gaps = 8/246 (3%)
Query: 29 NAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVF 88
+ T S++L AC+ G + A + + AL+ + K+G + A +V
Sbjct: 280 DEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVL 339
Query: 89 NRMPEK----NSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYA 144
M E +SVTY ++ +Y + G + A + + M + G+ P+A+ + ++ A A
Sbjct: 340 KEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKA 399
Query: 145 GLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVME--I 202
G DE L++F SM + + P+T Y V +LG+ R E + + + +G
Sbjct: 400 GKEDEALKLFYSMKEAGCV-PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRAT 458
Query: 203 WGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQI 262
W ++L C N G + V ++ S E ++ L+S Y G + ++ ++
Sbjct: 459 WNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLIS-AYGRCGSEVDASKMYGEM 517
Query: 263 TEKGLH 268
T G +
Sbjct: 518 TRAGFN 523
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 6/138 (4%)
Query: 64 NVYAGTALVDTYSKSGAISYAENVFNRM----PEKNSVTYTTMMMSYGQHGMG-RRALTL 118
+V A T ++ YS++G A ++F RM P VTY ++ +G+ G R+ L +
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 119 YDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG 178
D M G+K D +LSAC+ GL+ E E F + K +P T Y + + G
Sbjct: 269 LDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL-KSCGYEPGTVTYNALLQVFG 327
Query: 179 RVGRVVEAYEFVKQLGED 196
+ G EA +K++ E+
Sbjct: 328 KAGVYTEALSVLKEMEEN 345
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/266 (20%), Positives = 110/266 (41%), Gaps = 8/266 (3%)
Query: 5 YTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQN 64
+ + G+ +A+ L+E + ++VT + ++ A G A + + + N
Sbjct: 326 FGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPN 385
Query: 65 VYAGTALVDTYSKSGAISYAENVFNRMPE----KNSVTYTTMMMSYGQHGMGRRALTLYD 120
T ++D Y K+G A +F M E N+ TY ++ G+ + +
Sbjct: 386 AITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLC 445
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M +G P+ + +L+ C G+ +F M K +P + + + GR
Sbjct: 446 DMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREM-KSCGFEPDRDTFNTLISAYGRC 504
Query: 181 GRVVEAYEFVKQLGEDG--NVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGY 238
G V+A + ++ G + + ++L A G + G+ V + S + Y
Sbjct: 505 GSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSY 564
Query: 239 HVLLSNIYAEEGEWENVDRVRNQITE 264
++L YA+ G + ++R+ N+I E
Sbjct: 565 SLML-QCYAKGGNYLGIERIENRIKE 589
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 111/255 (43%), Gaps = 32/255 (12%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
PN V+ ++IL A L R ++QNV ++ Y K+ A N+
Sbjct: 363 PNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNL 422
Query: 88 FNRMP----EKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSY 143
M E N++TY+T++ +G+ G RA TL+ + SG++ D V + ++ A
Sbjct: 423 VQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYER 482
Query: 144 AGLVDEGLEIFESMVKIHKIK-PSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEI 202
GL+ + +H++K P +L + GR EA +Q E G V +I
Sbjct: 483 VGLMGHAKRL------LHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDI 536
Query: 203 WGSILGA-----CKNHGYFELGKVVAEKLLSMETEKRVAGYH------VLLSNIYAEEGE 251
S+ G +N Y + +V EK+ R AGY ++ N Y ++ E
Sbjct: 537 --SVFGCMINLYSRNQRYVNVIEVF-EKM-------RTAGYFPDSNVIAMVLNAYGKQRE 586
Query: 252 WENVDRVRNQITEKG 266
+E D V ++ E+G
Sbjct: 587 FEKADTVYREMQEEG 601
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 23 LHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAIS 82
+ + PN VT + +L A + +G + L + +VY ++D Y K+G I
Sbjct: 201 IERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIK 260
Query: 83 YAENVFNRMP----EKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAIL 138
E V RM + + +T+ ++ SYG+ + + S++RS KP F +++
Sbjct: 261 EMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMI 320
Query: 139 SACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGN 198
A ++D+ +F+ M ++ I PS Y C+ M G G V A E +++GE
Sbjct: 321 INYGKARMIDKAEWVFKKMNDMNYI-PSFITYECMIMMYGYCGSVSRAREIFEEVGESDR 379
Query: 199 VMEIWGSILGA-----CKNHGYFELGKV 221
V++ S L A C+N Y E K+
Sbjct: 380 VLK--ASTLNAMLEVYCRNGLYIEADKL 405
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 12/208 (5%)
Query: 23 LHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAIS 82
+ + PN VT + +L A + +G + L + +VY ++D Y K+G I
Sbjct: 201 IERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIK 260
Query: 83 YAENVFNRMP----EKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAIL 138
E V RM + + +T+ ++ SYG+ + + S++RS KP F +++
Sbjct: 261 EMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMI 320
Query: 139 SACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGN 198
A ++D+ +F+ M ++ I PS Y C+ M G G V A E +++GE
Sbjct: 321 INYGKARMIDKAEWVFKKMNDMNYI-PSFITYECMIMMYGYCGSVSRAREIFEEVGESDR 379
Query: 199 VMEIWGSILGA-----CKNHGYFELGKV 221
V++ S L A C+N Y E K+
Sbjct: 380 VLK--ASTLNAMLEVYCRNGLYIEADKL 405
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 114/256 (44%), Gaps = 7/256 (2%)
Query: 19 REALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKS 78
RE L P+ V+ ++++ G A+ L + ++ L+D +S
Sbjct: 363 RELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCES 422
Query: 79 GAISYAENVFNRMPEK----NSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAF 134
G + A+ + M + + +TYTT++ + ++G A +YD MLR GIKPD A+
Sbjct: 423 GNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAY 482
Query: 135 VAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLG 194
G D+ + E MV P Y D L +VG +V+A EF +++
Sbjct: 483 TTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIF 542
Query: 195 EDGNVME--IWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEW 252
G V + + +++ +G F++ + + +++L V Y VL+ +A+ G
Sbjct: 543 RVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYG-HAKAGRL 601
Query: 253 ENVDRVRNQITEKGLH 268
E + ++ ++G+
Sbjct: 602 EQAFQYSTEMKKRGVR 617
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 134/319 (42%), Gaps = 25/319 (7%)
Query: 5 YTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQN 64
YT+ + EK +L+ + + +P+ + +L + + A+ ++ I H +
Sbjct: 178 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 237
Query: 65 VYAGTALVDTYSKSGAISYAENVFNRMPEKN----SVTYTTMMMSYGQHGMGRRALTLYD 120
V ++D+ K+G + + ++ M +N VTY ++ + ++G A +
Sbjct: 238 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 297
Query: 121 SMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRV 180
M RSG +F ++ GL D+ + + M+ I P+T Y L
Sbjct: 298 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNA-GIYPTTSTYNIYICALCDF 356
Query: 181 GRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLL-----SMETEKRV 235
GR+ +A E + + V + +++ HGY ++GK V LL + + +
Sbjct: 357 GRIDDARELLSSMAAPDVVS--YNTLM-----HGYIKMGKFVEASLLFDDLRAGDIHPSI 409
Query: 236 AGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQS 295
Y+ L+ + E G E R++ ++T + + ++ + G V ++ +
Sbjct: 410 VTYNTLIDGL-CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFV-----KNGNLSMA 463
Query: 296 GEIYDILDKLTMDIKDAGY 314
E+YD + L IK GY
Sbjct: 464 TEVYD--EMLRKGIKPDGY 480
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 91/204 (44%), Gaps = 10/204 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSI--- 57
++ G+ +NG A E L + P+ ++ G A +LH +
Sbjct: 450 LVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATD 509
Query: 58 RHFMDQNVYAGTALVDTYSKSG----AISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGR 113
H D +Y +D K G AI + +F + VTYTT++ Y ++G +
Sbjct: 510 HHAPDLTIY--NVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFK 567
Query: 114 RALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCV 173
A LYD MLR + P + + ++ + AG +++ + + + +K ++P+ + +
Sbjct: 568 MARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQ-YSTEMKKRGVRPNVMTHNAL 626
Query: 174 ADMLGRVGRVVEAYEFVKQLGEDG 197
+ + G + EAY ++ ++ E+G
Sbjct: 627 LYGMCKAGNIDEAYRYLCKMEEEG 650
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 8/228 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G+ + G ++A + + P+ + S+++ G + +L ++
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRM----PEKNSVTYTTMMMSYGQHGMGRRAL 116
+ +V ++ +D Y KSG ++ A V+ RM N VTYT ++ Q G A
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
+Y +L+ G++P V + +++ G + G ++E M+K+ P Y + D
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM-GYPPDVVIYGVLVDG 470
Query: 177 LGRVGRVVEAYEF-VKQLGED--GNVMEIWGSILGACKNHGYFELGKV 221
L + G ++ A F VK LG+ NV+ I G C+ + + E KV
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 5/198 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GY + G+ +AL V + V SS + +G +A A+ ++ +
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 61 MDQNVYAGTALVDTYSKSGAISYA----ENVFNRMPEKNSVTYTTMMMSYGQHGMGRRAL 116
+ NV T L+ + G I A + R E + VTY++++ + + G R
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
LY+ M++ G PD V + ++ S GL+ + M+ I+ + + + D
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG-QSIRLNVVVFNSLIDG 505
Query: 177 LGRVGRVVEAYEFVKQLG 194
R+ R EA + + +G
Sbjct: 506 WCRLNRFDEALKVFRLMG 523
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 13/196 (6%)
Query: 25 KVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQ---NVYAGTALVDTYSKSGAI 81
KV P+ T + I+ S G + A L S+R + +V T+++ YS G I
Sbjct: 278 KVRPDTTTFNIIIYCLSKLGQSSQALDLFN-SMREKRAECRPDVVTFTSIMHLYSVKGEI 336
Query: 82 SYAENVFNRMP----EKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAI 137
VF M + N V+Y +M +Y HGM AL++ + ++GI PD V++ +
Sbjct: 337 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 396
Query: 138 LSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDG 197
L++ + + E+F M++ + KP+ Y + D G G + EA E +Q+ +DG
Sbjct: 397 LNSYGRSRQPGKAKEVF-LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 455
Query: 198 ---NVMEIWGSILGAC 210
NV+ + ++L AC
Sbjct: 456 IKPNVVSV-CTLLAAC 470
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 141/324 (43%), Gaps = 55/324 (16%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
PN V+ ++++ A + G A + G ++ + +V + T L+++Y +S A+ V
Sbjct: 353 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 412
Query: 88 FNRMPEK----NSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSY 143
F M ++ N VTY ++ +YG +G A+ ++ M + GIKP+ V+ +L+ACS
Sbjct: 413 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 472
Query: 144 -----------------------------------AGLVDEGLEIFESMVKIHKIKPSTE 168
A +++ + +++SM K K+K +
Sbjct: 473 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRK-KKVKADSV 531
Query: 169 HYCCVADMLGRVGRVVEAYEFVKQLGEDGNV---MEIWGSILGACKNHGYFELGKVVAEK 225
+ + R+ + EA ++K++ ED ++ E++ S+L A G + + +
Sbjct: 532 TFTILISGSCRMSKYPEAISYLKEM-EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQ 590
Query: 226 LLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKE-MGCSLV-----EIG 279
+ E V Y +L A E +W + ++ G+ + + CS + + G
Sbjct: 591 MKMAGCEPDVIAYTSMLHAYNASE-KWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 649
Query: 280 GLVNYFV----SRDEKHPQSGEIY 299
N FV R+++ P +G ++
Sbjct: 650 QPSNVFVLMDLMREKEIPFTGAVF 673
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 2 IAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILP-ACSSTG---SIAFATQLHGFSI 57
I Y EKAI + KV ++VT + ++ +C + +I++ ++ SI
Sbjct: 502 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI 561
Query: 58 RHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMP----EKNSVTYTTMMMSYGQHGMGR 113
+ + VY ++++ YSK G ++ AE++FN+M E + + YT+M+ +Y
Sbjct: 562 P--LTKEVY--SSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWG 617
Query: 114 RALTLYDSMLRSGIKPDAVAFVAILSACSYAG 145
+A L+ M +GI+PD++A A++ A + G
Sbjct: 618 KACELFLEMEANGIEPDSIACSALMRAFNKGG 649
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 70 ALVDTYSKSGAISYAENVFNRM------PEKNSVTYTTMMMSYGQHGMGRRALTLYDSML 123
AL++ + ++G +A N+ + M P ++ TY ++ + G G R AL + M
Sbjct: 183 ALINAHGRAGQWRWAMNLMDDMLRAAIAPSRS--TYNNLINACGSSGNWREALEVCKKMT 240
Query: 124 RSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRV 183
+G+ PD V +LSA + L FE ++K K++P T + + L ++G+
Sbjct: 241 DNGVGPDLVTHNIVLSAYKSGRQYSKALSYFE-LMKGAKVRPDTTTFNIIIYCLSKLGQS 299
Query: 184 VEAYEFVKQLGE 195
+A + + E
Sbjct: 300 SQALDLFNSMRE 311
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 104/228 (45%), Gaps = 8/228 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G+ + G ++A + + P+ + S+++ G + +L ++
Sbjct: 292 LINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKG 351
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRM----PEKNSVTYTTMMMSYGQHGMGRRAL 116
+ +V ++ +D Y KSG ++ A V+ RM N VTYT ++ Q G A
Sbjct: 352 VKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAF 411
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
+Y +L+ G++P V + +++ G + G ++E M+K+ P Y + D
Sbjct: 412 GMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKM-GYPPDVVIYGVLVDG 470
Query: 177 LGRVGRVVEAYEF-VKQLGED--GNVMEIWGSILGACKNHGYFELGKV 221
L + G ++ A F VK LG+ NV+ I G C+ + + E KV
Sbjct: 471 LSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKV 518
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 78/179 (43%), Gaps = 5/179 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G Q+G +A + L + P+ VT SS++ G++ L+ I+
Sbjct: 397 LIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMG 456
Query: 61 MDQNVYAGTALVDTYSKSG----AISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRAL 116
+V LVD SK G A+ ++ + + N V + +++ + + AL
Sbjct: 457 YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEAL 516
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD 175
++ M GIKPD F ++ G ++E L +F M K+ ++P YC + D
Sbjct: 517 KVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKM-GLEPDALAYCTLID 574
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 5/198 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GY + G+ +AL V + V SS + +G +A A+ ++ +
Sbjct: 327 LIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQG 386
Query: 61 MDQNVYAGTALVDTYSKSGAISYA----ENVFNRMPEKNSVTYTTMMMSYGQHGMGRRAL 116
+ NV T L+ + G I A + R E + VTY++++ + + G R
Sbjct: 387 ISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGF 446
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
LY+ M++ G PD V + ++ S GL+ + M+ I+ + + + D
Sbjct: 447 ALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG-QSIRLNVVVFNSLIDG 505
Query: 177 LGRVGRVVEAYEFVKQLG 194
R+ R EA + + +G
Sbjct: 506 WCRLNRFDEALKVFRLMG 523
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 13/196 (6%)
Query: 25 KVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQ---NVYAGTALVDTYSKSGAI 81
KV P+ T + I+ S G + A L S+R + +V T+++ YS G I
Sbjct: 146 KVRPDTTTFNIIIYCLSKLGQSSQALDLFN-SMREKRAECRPDVVTFTSIMHLYSVKGEI 204
Query: 82 SYAENVFNRMP----EKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAI 137
VF M + N V+Y +M +Y HGM AL++ + ++GI PD V++ +
Sbjct: 205 ENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCL 264
Query: 138 LSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDG 197
L++ + + E+F M++ + KP+ Y + D G G + EA E +Q+ +DG
Sbjct: 265 LNSYGRSRQPGKAKEVF-LMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDG 323
Query: 198 ---NVMEIWGSILGAC 210
NV+ + ++L AC
Sbjct: 324 IKPNVVSV-CTLLAAC 338
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/324 (20%), Positives = 141/324 (43%), Gaps = 55/324 (16%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
PN V+ ++++ A + G A + G ++ + +V + T L+++Y +S A+ V
Sbjct: 221 PNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEV 280
Query: 88 FNRMPEK----NSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSY 143
F M ++ N VTY ++ +YG +G A+ ++ M + GIKP+ V+ +L+ACS
Sbjct: 281 FLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSR 340
Query: 144 -----------------------------------AGLVDEGLEIFESMVKIHKIKPSTE 168
A +++ + +++SM K K+K +
Sbjct: 341 SKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRK-KKVKADSV 399
Query: 169 HYCCVADMLGRVGRVVEAYEFVKQLGEDGNV---MEIWGSILGACKNHGYFELGKVVAEK 225
+ + R+ + EA ++K++ ED ++ E++ S+L A G + + +
Sbjct: 400 TFTILISGSCRMSKYPEAISYLKEM-EDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQ 458
Query: 226 LLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKE-MGCSLV-----EIG 279
+ E V Y +L A E +W + ++ G+ + + CS + + G
Sbjct: 459 MKMAGCEPDVIAYTSMLHAYNASE-KWGKACELFLEMEANGIEPDSIACSALMRAFNKGG 517
Query: 280 GLVNYFV----SRDEKHPQSGEIY 299
N FV R+++ P +G ++
Sbjct: 518 QPSNVFVLMDLMREKEIPFTGAVF 541
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 2 IAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILP-ACSSTG---SIAFATQLHGFSI 57
I Y EKAI + KV ++VT + ++ +C + +I++ ++ SI
Sbjct: 370 IGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDLSI 429
Query: 58 RHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMP----EKNSVTYTTMMMSYGQHGMGR 113
+ + VY ++++ YSK G ++ AE++FN+M E + + YT+M+ +Y
Sbjct: 430 P--LTKEVY--SSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWG 485
Query: 114 RALTLYDSMLRSGIKPDAVAFVAILSACSYAG 145
+A L+ M +GI+PD++A A++ A + G
Sbjct: 486 KACELFLEMEANGIEPDSIACSALMRAFNKGG 517
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 9/132 (6%)
Query: 70 ALVDTYSKSGAISYAENVFNRM------PEKNSVTYTTMMMSYGQHGMGRRALTLYDSML 123
AL++ + ++G +A N+ + M P ++ TY ++ + G G R AL + M
Sbjct: 51 ALINAHGRAGQWRWAMNLMDDMLRAAIAPSRS--TYNNLINACGSSGNWREALEVCKKMT 108
Query: 124 RSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRV 183
+G+ PD V +LSA + L FE ++K K++P T + + L ++G+
Sbjct: 109 DNGVGPDLVTHNIVLSAYKSGRQYSKALSYFE-LMKGAKVRPDTTTFNIIIYCLSKLGQS 167
Query: 184 VEAYEFVKQLGE 195
+A + + E
Sbjct: 168 SQALDLFNSMRE 179
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 100/222 (45%), Gaps = 8/222 (3%)
Query: 8 NGLNEKAILTLREALLHKVIPNAVTLSS-ILPACSSTGSIAFATQLHGFSIRHFMDQNVY 66
N +NE A+ L E L +P+A T + IL C A ++ IR F ++
Sbjct: 266 NRVNE-ALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDIT 324
Query: 67 AGTALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRS- 125
G L++ K G + A+++F R+P+ V + T++ + HG A + M+ S
Sbjct: 325 YGY-LMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSY 383
Query: 126 GIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVE 185
GI PD + +++ GLV LE+ M + KP+ Y + D ++G++ E
Sbjct: 384 GIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM-RNKGCKPNVYSYTILVDGFCKLGKIDE 442
Query: 186 AYEFVKQLGEDG---NVMEIWGSILGACKNHGYFELGKVVAE 224
AY + ++ DG N + I CK H E ++ E
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFRE 484
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 108/249 (43%), Gaps = 7/249 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++ G+ + G ++A L E + PN V + ++ A I A ++ R
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK----NSVTYTTMMMSYGQHGMGRRAL 116
+VY +L+ + I +A + M + N+VTY T++ ++ + G + A
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
L + M+ G D + + +++ AG VD+ +FE M++ PS + +
Sbjct: 550 KLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLR-DGHAPSNISCNILING 608
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEI--WGSILGACKNHGYFELGKVVAEKLLSMETEKR 234
L R G V EA EF K++ G+ +I + S++ G E G + KL +
Sbjct: 609 LCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPD 668
Query: 235 VAGYHVLLS 243
++ L+S
Sbjct: 669 TVTFNTLMS 677
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/275 (23%), Positives = 127/275 (46%), Gaps = 12/275 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH- 59
++ G+ G +A+ + + K P+ VT+S+++ G ++ A L + +
Sbjct: 146 LVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYG 205
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKN----SVTYTTMMMSYGQHGMGRRA 115
F V G L + KSG + A ++F +M E+N V Y+ ++ S + G A
Sbjct: 206 FQPDEVTYGPVL-NRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDA 264
Query: 116 LTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD 175
L+L++ M GIK D V + +++ G D+G ++ M+ I P + + D
Sbjct: 265 LSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIG-RNIIPDVVTFSALID 323
Query: 176 MLGRVGRVVEAYEFVKQLGEDG---NVMEIWGSILGACKNHGYFELGKVVAEKLLSMETE 232
+ + G+++EA E ++ G + + I G CK + E ++ + ++S E
Sbjct: 324 VFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF-DLMVSKGCE 382
Query: 233 KRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGL 267
+ Y +L+ N Y + ++ R+ +I+ KGL
Sbjct: 383 PDIVTYSILI-NSYCKAKRVDDGMRLFREISSKGL 416
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 89/197 (45%), Gaps = 5/197 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G +G + LRE + +IP+ VT S+++ G + A +L+ I
Sbjct: 286 LIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRG 345
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRM----PEKNSVTYTTMMMSYGQHGMGRRAL 116
+ + +L+D + K + A +F+ M E + VTY+ ++ SY + +
Sbjct: 346 IAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGM 405
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
L+ + G+ P+ + + ++ +G ++ E+F+ MV + PS Y + D
Sbjct: 406 RLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS-RGVPPSVVTYGILLDG 464
Query: 177 LGRVGRVVEAYEFVKQL 193
L G + +A E +++
Sbjct: 465 LCDNGELNKALEIFEKM 481
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/298 (18%), Positives = 130/298 (43%), Gaps = 23/298 (7%)
Query: 14 AILTLREALLHKVIPNAVTLSSILPACSSTGS----IAFATQLHGFSIRHFMDQNVYAGT 69
AI + + +P + + + A + T + F + I H ++Y T
Sbjct: 54 AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEH----DMYTMT 109
Query: 70 ALVDTYSKSGAISYAENVFNRMP----EKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRS 125
+++ Y + + +A +V R E +++T++T++ + G A+ L D M+
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 126 GIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVE 185
+PD V +++ G V E L + + MV+ + +P Y V + L + G
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVE-YGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 186 AYEFVKQLGE---DGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLL 242
A + +++ E +V++ I CK+ G F+ + ++ + V Y L+
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKD-GSFDDALSLFNEMEMKGIKADVVTYSSLI 287
Query: 243 SNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYD 300
+ +G+W++ ++ ++ + + + +V L++ FV ++ K ++ E+Y+
Sbjct: 288 GGL-CNDGKWDDGAKMLREMIGRNIIPD----VVTFSALIDVFV-KEGKLLEAKELYN 339
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 123/278 (44%), Gaps = 12/278 (4%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK-VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
+I G+ G N LTL + + K +PN VT ++++ I +L
Sbjct: 211 LIRGFCFAG-NIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK----NSVTYTTMMMSYGQHGMGRRA 115
++ N+ + +++ + G + V M + + VTY T++ Y + G +A
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQA 329
Query: 116 LTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD 175
L ++ MLR G+ P + + +++ + AG ++ +E + M ++ + P+ Y + D
Sbjct: 330 LVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM-RVRGLCPNERTYTTLVD 388
Query: 176 MLGRVGRVVEAYEFVKQLGEDG---NVMEIWGSILGACKNHGYFELGKVVAEKLLSMETE 232
+ G + EAY ++++ ++G +V+ I G C G E V E +
Sbjct: 389 GFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT-GKMEDAIAVLEDMKEKGLS 447
Query: 233 KRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKE 270
V Y +LS + + + RV+ ++ EKG+ +
Sbjct: 448 PDVVSYSTVLSG-FCRSYDVDEALRVKREMVEKGIKPD 484
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 123/303 (40%), Gaps = 55/303 (18%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GY + G +A++ E L H + P+ +T +S++ + G++ A + F
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME--------F 367
Query: 61 MDQNVYAG--------TALVDTYSKSGAISYAENVFNRMPEK----NSVTYTTMMMSYGQ 108
+DQ G T LVD +S+ G ++ A V M + + VTY ++ +
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 109 HGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTE 168
G A+ + + M G+ PD V++ +LS + VDE L + MV+ IKP T
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE-KGIKPDTI 486
Query: 169 HYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLS 228
Y + R EA + + E++L
Sbjct: 487 TYSSLIQGFCEQRRTKEACD---------------------------------LYEEMLR 513
Query: 229 METEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYFVSR 288
+ Y L+ N Y EG+ E ++ N++ EKG+ ++ V I GL +R
Sbjct: 514 VGLPPDEFTYTALI-NAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTR 572
Query: 289 DEK 291
+ K
Sbjct: 573 EAK 575
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 103/218 (47%), Gaps = 7/218 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++ G++Q G +A LRE + P+ VT ++++ TG + A +
Sbjct: 386 LVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKG 445
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK----NSVTYTTMMMSYGQHGMGRRAL 116
+ +V + + ++ + +S + A V M EK +++TY++++ + + + A
Sbjct: 446 LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEAC 505
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
LY+ MLR G+ PD + A+++A G +++ L++ MV+ + P Y + +
Sbjct: 506 DLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE-KGVLPDVVTYSVLING 564
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVME--IWGSILGACKN 212
L + R EA + +L + +V + +++ C N
Sbjct: 565 LNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSN 602
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 101/231 (43%), Gaps = 17/231 (7%)
Query: 45 SIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGA-ISYAENVFNRMPE----KNSVTY 99
SI Q HGF V + A++D +S IS+AENVF M E N TY
Sbjct: 155 SIVHLAQAHGFM------PGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTY 208
Query: 100 TTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVK 159
++ + G ALTL+D M G P+ V + ++ +D+G ++ SM
Sbjct: 209 NILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMA- 267
Query: 160 IHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVME--IWGSIL-GACKNHGYF 216
+ ++P+ Y V + L R GR+ E + ++ G ++ + +++ G CK G F
Sbjct: 268 LKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCK-EGNF 326
Query: 217 ELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGL 267
V+ ++L V Y L+ ++ + G +Q+ +GL
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSM-CKAGNMNRAMEFLDQMRVRGL 376
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 120/290 (41%), Gaps = 27/290 (9%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+++G+ ++ ++A+ RE + + P+ +T SS++ A L+ +R
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK----NSVTYTTMMMSYGQHGMGRRAL 116
+ + + TAL++ Y G + A + N M EK + VTY+ ++ + R A
Sbjct: 516 LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAK 575
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACS---------------YAGLVDEGLEIFESMV-KI 160
L + P V + ++ CS G++ E ++FESM+ K
Sbjct: 576 RLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKN 635
Query: 161 HKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWG--SILGACKNHGYF-E 217
H KP Y + R G + +AY K++ + G ++ +++ A G E
Sbjct: 636 H--KPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNE 693
Query: 218 LGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGL 267
L V+ L S E + A +L I EG + V V ++ + G
Sbjct: 694 LNSVIVHVLRSCELSE--AEQAKVLVEINHREGNMDVVLDVLAEMAKDGF 741
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/313 (19%), Positives = 123/313 (39%), Gaps = 44/313 (14%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPAC-SSTGSIAFATQLHGFSIRH 59
++ Y++ L +KA+ + A H +P ++ +++L A S +I+FA + +
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK----NSVTYTTMMMSYGQHGMGRRA 115
+ NV+ L+ + +G I A +F++M K N VTY T++ Y +
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 116 LTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDE-------------------------- 149
L SM G++P+ +++ +++ G + E
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 150 ---------GLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVM 200
L + M++ H + PS Y + + + G + A EF+ Q+ G
Sbjct: 320 YCKEGNFHQALVMHAEMLR-HGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCP 378
Query: 201 --EIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRV 258
+ +++ GY V ++ V Y+ L+ N + G+ E+ V
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI-NGHCVTGKMEDAIAV 437
Query: 259 RNQITEKGLHKEM 271
+ EKGL ++
Sbjct: 438 LEDMKEKGLSPDV 450
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 132/298 (44%), Gaps = 32/298 (10%)
Query: 29 NAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVF 88
+AVT ++++ S++G A +L ++ +D NV TAL+DT+ K G + A N++
Sbjct: 218 DAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLY 277
Query: 89 NRMPEK----NSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYA 144
M + N TY +++ + HG A ++D M+ G PD V + +++ +
Sbjct: 278 KEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKS 337
Query: 145 GLVDEGLEIFESMVKIHKIKPSTEH------YCCVADMLGRVGRVVEAYEFVKQLGEDGN 198
V++G+++F M + + + YC + G++ A + ++ + G
Sbjct: 338 KRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYC-------QAGKLNVAQKVFNRMVDCGV 390
Query: 199 VMEI--WGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVD 256
+I + +L N+G E V+ E L E + + Y++++ + + E
Sbjct: 391 SPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWC 450
Query: 257 RVRNQITEKGLHKEMGCSLVEIGGLVNYFVSRDEKHPQSGEIYDILDKLTMDIKDAGY 314
R+ +T KG+ + + I GL + R+ DKL +K+ G+
Sbjct: 451 LFRS-LTRKGVKPDAIAYITMISGLCRKGLQREA------------DKLCRRMKEDGF 495
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 99/218 (45%), Gaps = 8/218 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+G + +G A LR+ + K+ PN + ++++ G++ A L+ IR
Sbjct: 225 LISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRS 284
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK----NSVTYTTMMMSYGQHGMGRRAL 116
+ NV+ +L++ + G + A+ +F+ M K + VTY T++ + + +
Sbjct: 285 VVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGM 344
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
L+ M G+ DA + ++ AG ++ ++F MV + P Y + D
Sbjct: 345 KLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC-GVSPDIVTYNILLDC 403
Query: 177 LGRVGRVVEAYEFVKQLGE---DGNVMEIWGSILGACK 211
L G++ +A V+ L + D +++ I G C+
Sbjct: 404 LCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/275 (22%), Positives = 122/275 (44%), Gaps = 10/275 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++ G + G+ E A L+E +P+A T S + SS A ++ ++
Sbjct: 290 LLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSG 349
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK----NSVTYTTMMMSYGQHGMGRRAL 116
+ N Y + L++ K G I AE + R K N V Y TM+ Y + G A
Sbjct: 350 VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGAR 409
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
++M + G+KPD +A+ ++ G ++ + M K+ + PS E Y +
Sbjct: 410 MKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKM-KLKGVSPSVETYNILIGG 468
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEI--WGSILGA-CKNHGYFELGKVVAEKLLSMETEK 233
GR + ++ +K++ ++G + + +G+++ CK E ++V +
Sbjct: 469 YGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE-AQIVKRDMEDRGVSP 527
Query: 234 RVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLH 268
+V Y++L+ +G+ E+ R ++ +KG+
Sbjct: 528 KVRIYNMLIDGC-CSKGKIEDAFRFSKEMLKKGIE 561
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 9/174 (5%)
Query: 26 VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAE 85
V P + ++ C S G I A + ++ ++ N+ L+D S +G +S AE
Sbjct: 525 VSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAE 584
Query: 86 NVFNRMPEK----NSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSAC 141
++ + K + TY +++ YG G +R + LY+ M RSGIKP + ++S C
Sbjct: 585 DLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLC 644
Query: 142 SYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGE 195
+ EG+E+ E + +KP Y V G + +A+ KQ+ E
Sbjct: 645 T-----KEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIE 693
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 127/324 (39%), Gaps = 43/324 (13%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++ G NG A+L + + PN VT +L +G A A +L
Sbjct: 183 LVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERK 242
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK----NSVTYTTMMMSYGQHGMGRRAL 116
+ + + ++D K G++ A N+FN M K + + YTT++ + G
Sbjct: 243 IKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGA 302
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
L M++ I PD VAF A++ G + E E+ + M++ I P T Y + D
Sbjct: 303 KLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQ-RGISPDTVTYTSLIDG 361
Query: 177 LGRVGRVVEAYEFVKQLGEDG---NVMEIWGSILGACKN--------------------- 212
+ ++ +A + + G N+ I G CK
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD 421
Query: 213 --------HGYFELGKV-VAEKLLSMETEKRV----AGYHVLLSNIYAEEGEWENVDRVR 259
G+ ELGK+ VA++L +RV Y +LL + + GE E +
Sbjct: 422 TVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL-CDNGEPEKALEIF 480
Query: 260 NQITEKGLHKEMGCSLVEIGGLVN 283
+I + + ++G + I G+ N
Sbjct: 481 EKIEKSKMELDIGIYNIIIHGMCN 504
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 7/178 (3%)
Query: 24 HKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISY 83
HK P +TL++++ G ++ A L + N ++ KSG +
Sbjct: 173 HK--PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 84 AENVFNRMPEK----NSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILS 139
A + +M E+ ++V Y+ ++ + G A L++ M G K D + + ++
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 140 ACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDG 197
YAG D+G ++ M+K KI P + + D + G++ EA E K++ + G
Sbjct: 291 GFCYAGRWDDGAKLLRDMIK-RKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 133/311 (42%), Gaps = 46/311 (14%)
Query: 1 MIAGYTQ---NGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSI 57
+I GY + NG KA L+E + + V PN T + ++ ++ + ++ +
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323
Query: 58 RHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMP----EKNSVTYTTMMMSYGQHGMGR 113
+ NV + +L++ G IS A ++ ++M + N +TY ++ + ++ M +
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383
Query: 114 RALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCV 173
AL ++ S+ G P + ++ A G +D+G + E M + I P Y C+
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMER-EGIVPDVGTYNCL 442
Query: 174 ADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGSIL--GACKN------------------- 212
L R G + A + QL G + IL G C+
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502
Query: 213 ----------HGYFELGKVVAEKLL--SMETEKR----VAGYHVLLSNIYAEEGEWENVD 256
GY + G + A + ME E+R VA Y+VLL Y+++G+ E+ +
Sbjct: 503 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQG-YSQKGKLEDAN 561
Query: 257 RVRNQITEKGL 267
+ N++ EKGL
Sbjct: 562 MLLNEMLEKGL 572
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/295 (19%), Positives = 128/295 (43%), Gaps = 51/295 (17%)
Query: 19 REALLHKVIPNAVTLSSILPACSSTGS--------------------IAFATQLHGFS-- 56
+E + K+ PN T + ++ A TG +++ T + G+
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 57 ----------------IRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK----NS 96
+ + + N+ L+D + K + + VF M ++ N
Sbjct: 272 GGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNV 331
Query: 97 VTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFES 156
++Y +++ G A+++ D M+ +G++P+ + + A+++ ++ E L++F S
Sbjct: 332 ISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGS 391
Query: 157 MVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWGS----ILGACKN 212
VK P+T Y + D ++G++ + + +++ +G V ++ G+ I G C+N
Sbjct: 392 -VKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDV-GTYNCLIAGLCRN 449
Query: 213 HGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGL 267
G E K + ++L S V +H+L+ Y +GE + ++++ GL
Sbjct: 450 -GNIEAAKKLFDQLTSKGLPDLVT-FHILMEG-YCRKGESRKAAMLLKEMSKMGL 501
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/264 (21%), Positives = 116/264 (43%), Gaps = 16/264 (6%)
Query: 18 LREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSK 77
LRE ++P++V+ + ++ CS+ G + A ++ M Y L+
Sbjct: 315 LREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFM 374
Query: 78 SGAISYAENVFNRMPEK----NSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVA 133
I AE + + EK +SVTY ++ Y QHG ++A L+D M+ GI+P
Sbjct: 375 ENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFT 434
Query: 134 FVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQL 193
+ +++ E E+FE +V +KP + D +G + A+ +K++
Sbjct: 435 YTSLIYVLCRKNKTREADELFEKVVG-KGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 194 GEDGNVMEI------WGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYA 247
++M I + ++ G FE + + ++ + Y+ L+S Y+
Sbjct: 494 ----DMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISG-YS 548
Query: 248 EEGEWENVDRVRNQITEKGLHKEM 271
++G+ ++ VR+++ G + +
Sbjct: 549 KKGDTKHAFMVRDEMLSLGFNPTL 572
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 100/240 (41%), Gaps = 19/240 (7%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
P T + ++ C+S+ I A + M + T L+ + +KSG + V
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 88 FNRMP----EKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSY 143
F++M E N T+ ++ + G +A Y + +KPD V F A++SAC
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 144 AGLVDEGLEIFESM-VKIHKIKP------STEHYCCVADMLGRVGRVVEAYEFVKQLGED 196
+G VD ++ M + H I P + CC A G+V R E Y+ + + G
Sbjct: 585 SGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNA---GQVERAKEVYQMIHKYGIR 641
Query: 197 GNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVD 256
G E++ + +C G ++ + + + EK V V S + G + +D
Sbjct: 642 G-TPEVYTIAVNSCSKSGDWDFACSIYKDM----KEKDVTPDEVFFSALIDVAGHAKMLD 696
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 97/225 (43%), Gaps = 9/225 (4%)
Query: 29 NAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVF 88
N T +++ C+ G +A A +G + + AL+ +SGA+ A +V
Sbjct: 536 NLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQSGAVDRAFDVL 595
Query: 89 NRMP------EKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACS 142
M + + ++ +M + G RA +Y + + GI+ + +++CS
Sbjct: 596 AEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTPEVYTIAVNSCS 655
Query: 143 YAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEI 202
+G D I++ M K + P + + D+ G + EA+ ++ G +
Sbjct: 656 KSGDWDFACSIYKDM-KEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQDAKSQGIRLGT 714
Query: 203 --WGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNI 245
+ S++GAC N ++ + EK+ S++ ++ + L++ +
Sbjct: 715 ISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITAL 759
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 84/197 (42%), Gaps = 6/197 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++ +NGL +AI R+ + PN + +S++ GSI A ++ +R+
Sbjct: 258 ILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNG 317
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNSV-----TYTTMMMSYGQHGMGRRA 115
NVY TAL+D K G A +F ++ ++ TYT+M+ Y + RA
Sbjct: 318 WKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRA 377
Query: 116 LTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD 175
L+ M G+ P+ + +++ AG E+ M P+ Y D
Sbjct: 378 EMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGD-EGFMPNIYTYNAAID 436
Query: 176 MLGRVGRVVEAYEFVKQ 192
L + R EAYE + +
Sbjct: 437 SLCKKSRAPEAYELLNK 453
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 90/213 (42%), Gaps = 13/213 (6%)
Query: 9 GLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQ-LHGFSIRHFMDQNVYA 67
GL E A E + V+P++ + ++ C G I A + L G R F+ N
Sbjct: 196 GLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATC 255
Query: 68 G---TALVDTYSKSGAISYAENVFNRMPEKNSVTYTTMMMSYGQHGMGRRALTLYDSMLR 124
TAL + + AI Y + + + N + +T+++ + G ++A + + M+R
Sbjct: 256 TLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVR 315
Query: 125 SGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLG------ 178
+G KP+ A++ G ++ +F +V+ KP+ Y M+G
Sbjct: 316 NGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTY---TSMIGGYCKED 372
Query: 179 RVGRVVEAYEFVKQLGEDGNVMEIWGSILGACK 211
++ R + +K+ G NV I G CK
Sbjct: 373 KLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCK 405
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 3/166 (1%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G+ ++G+ E+AI R H V N + L+S++ A S G + A +++
Sbjct: 626 LINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSE 685
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNS---VTYTTMMMSYGQHGMGRRALT 117
+V A +++ + G +S AE++FN + EK + +++ TMM Y GM A+
Sbjct: 686 GGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIE 745
Query: 118 LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKI 163
+ + M SG+ D +F +++ + G + E E+F M+ K+
Sbjct: 746 VAEEMRESGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKL 791
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 99/207 (47%), Gaps = 19/207 (9%)
Query: 70 ALVDTYSKSGAISYAENVF----NRMPEKNSV-TYTTMMMSYGQHGMGRRALTLYDSMLR 124
A++D Y++ G AE VF N ++N V Y M+ +YG+ + +AL+L+ M
Sbjct: 484 AVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKN 543
Query: 125 SGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD---MLGRVG 181
G PD + ++ + LVDE I M+ KP + Y + LG +
Sbjct: 544 QGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLD-SGCKPGCKTYAAMIASYVRLGLLS 602
Query: 182 RVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKV-VAEKLLSMETEKRVAGYHV 240
V+ YE +++ G N + ++GS++ +G+ E G V A + M E V H+
Sbjct: 603 DAVDLYEAMEKTGVKPNEV-VYGSLI-----NGFAESGMVEEAIQYFRMMEEHGVQSNHI 656
Query: 241 LLSNI---YAEEGEWENVDRVRNQITE 264
+L+++ Y++ G E RV +++ +
Sbjct: 657 VLTSLIKAYSKVGCLEEARRVYDKMKD 683
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 91/201 (45%), Gaps = 23/201 (11%)
Query: 71 LVDTYSKSGAISYAENVFNRMPEK----NSVTYTTMMMSYGQHGMGRRALTLYDSMLRSG 126
L+D Y K+G ++ A N+F+ M + ++VT+ TM+ + G HG A +L M G
Sbjct: 311 LIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKG 370
Query: 127 IKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEA 186
I PD + +LS + AG ++ LE + + K+ + P T + V +L + V E
Sbjct: 371 ISPDTKTYNILLSLHADAGDIEAALEYYRKIRKV-GLFPDTVTHRAVLHILCQRKMVAEV 429
Query: 187 YEFVKQLGEDGNVMEI----WGSILGACKNHGYFELGKVVAEK-----LLSMETEKRVAG 237
+ ++ D N + I I+ N G K + E+ +LS T V
Sbjct: 430 EAVIAEM--DRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVI- 486
Query: 238 YHVLLSNIYAEEGEWENVDRV 258
++YAE+G W + V
Sbjct: 487 ------DVYAEKGLWVEAETV 501
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 82/174 (47%), Gaps = 4/174 (2%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
P+A+T +++L ACS ++ A ++ H +++ A++ Y + G + AE +
Sbjct: 295 PDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERL 354
Query: 88 FNRMPEK----NSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSY 143
F + K ++VTY +++ ++ + + +Y M + G D + + I+
Sbjct: 355 FMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGK 414
Query: 144 AGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDG 197
G +D L++++ M + P Y + D LG+ R VEA + ++ + G
Sbjct: 415 QGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVG 468
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 112/238 (47%), Gaps = 11/238 (4%)
Query: 22 LLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAI 81
L H PNA +++IL + A ++ + D+ V A++ YS+SG
Sbjct: 183 LRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRAEPTVGDR-VQVYNAMMGVYSRSGKF 241
Query: 82 SYAENVFNRMPEKNSV----TYTTMMMSYGQHG--MGRRALTLYDSMLRSGIKPDAVAFV 135
S A+ + + M ++ V ++ T++ + + G A+ L D + SG++PDA+ +
Sbjct: 242 SKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYN 301
Query: 136 AILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGE 195
+LSACS +D +++FE M + H+ +P Y + + GR G EA +L
Sbjct: 302 TLLSACSRDSNLDGAVKVFEDM-EAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELEL 360
Query: 196 DGNVME--IWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGE 251
G + + S+L A E K V +++ M K Y+ ++ ++Y ++G+
Sbjct: 361 KGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTII-HMYGKQGQ 417
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 88/212 (41%), Gaps = 22/212 (10%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI+ Y + GL +A E L P+AVT +S+L AFA + + ++
Sbjct: 338 MISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLL--------YAFARERNTEKVKEV 389
Query: 61 MDQNVYAG--------TALVDTYSKSGAISYAENVFNRMP-----EKNSVTYTTMMMSYG 107
Q G ++ Y K G + A ++ M +++TYT ++ S G
Sbjct: 390 YQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLG 449
Query: 108 QHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPST 167
+ A L ML GIKP + A++ + AG +E + F M++ KP
Sbjct: 450 KANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLR-SGTKPDN 508
Query: 168 EHYCCVADMLGRVGRVVEAYEFVKQLGEDGNV 199
Y + D+L R +A+ + + DG+
Sbjct: 509 LAYSVMLDVLLRGNETRKAWGLYRDMISDGHT 540
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 110/280 (39%), Gaps = 55/280 (19%)
Query: 26 VIPNAVTLSSILPACSSTGSIAFATQLH------GFSIRHFMDQNVYAGTALVDTYSKSG 79
+ P+A T ++++ C A Q+ GFS D+ Y AL+D Y KS
Sbjct: 275 IAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSY----DKVTY--NALLDVYGKSH 328
Query: 80 AISYAENVFNRMP----EKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFV 135
A V N M + VTY +++ +Y + GM A+ L + M G KPD +
Sbjct: 329 RPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYT 388
Query: 136 AILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQL-- 193
+LS AG V+ + IFE M + KP+ + M G G+ E + ++
Sbjct: 389 TLLSGFERAGKVESAMSIFEEM-RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINV 447
Query: 194 -----------------GEDGNVMEIWG------------------SILGACKNHGYFEL 218
G++G E+ G +++ A G FE
Sbjct: 448 CGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQ 507
Query: 219 GKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRV 258
V ++L ++ Y+ +L+ + A G WE ++V
Sbjct: 508 AMTVYRRMLDAGVTPDLSTYNTVLAAL-ARGGMWEQSEKV 546
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 93/210 (44%), Gaps = 14/210 (6%)
Query: 41 SSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKNS---- 96
SS ++ Q GFS+ +VY+ T+L+ ++ SG A NVF +M E
Sbjct: 190 SSAANMFNGLQEDGFSL------DVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTL 243
Query: 97 VTYTTMMMSYGQHGMGRRALT-LYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFE 155
+TY ++ +G+ G +T L + M GI PDA + +++ C L E ++FE
Sbjct: 244 ITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFE 303
Query: 156 SMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEI--WGSILGACKNH 213
M K Y + D+ G+ R EA + + ++ +G I + S++ A
Sbjct: 304 EM-KAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARD 362
Query: 214 GYFELGKVVAEKLLSMETEKRVAGYHVLLS 243
G + + ++ T+ V Y LLS
Sbjct: 363 GMLDEAMELKNQMAEKGTKPDVFTYTTLLS 392
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 80/179 (44%), Gaps = 9/179 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+++G+ + G E A+ E PN T ++ + + G ++
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRM------PEKNSVTYTTMMMSYGQHGMGRR 114
+ ++ L+ + ++G S VF M PE+ T+ T++ +Y + G +
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERE--TFNTLISAYSRCGSFEQ 507
Query: 115 ALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCV 173
A+T+Y ML +G+ PD + +L+A + G+ ++ ++ M + + KP+ YC +
Sbjct: 508 AMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEM-EDGRCKPNELTYCSL 565
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 99/226 (43%), Gaps = 27/226 (11%)
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK----NSVTYTTMMMSYGQHGMGRRAL 116
+D +V A ++ K G +S A N+FN + E + +YT+++ ++ G R A+
Sbjct: 171 LDNSVVA--IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAV 228
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHY-----C 171
++ M G KP + + IL+ G + +K I P Y C
Sbjct: 229 NVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITC 288
Query: 172 CVADMLGRVGRVVEAYEFVKQLGEDGN------VMEIWGSILGACKNHGYFELGKVVAEK 225
C L + + +E +K G + +++++G K+H E KV+ E
Sbjct: 289 CKRGSLHQ--EAAQVFEEMKAAGFSYDKVTYNALLDVYG------KSHRPKEAMKVLNEM 340
Query: 226 LLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEM 271
+L+ + + Y+ L+S YA +G + ++NQ+ EKG ++
Sbjct: 341 VLNGFSPS-IVTYNSLIS-AYARDGMLDEAMELKNQMAEKGTKPDV 384
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/287 (18%), Positives = 119/287 (41%), Gaps = 39/287 (13%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G ++G + A E + + +T ++++ + G +L I+
Sbjct: 269 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK----NSVTYTTMMMSYGQHGMGRRAL 116
+ NV + L+D++ K G + A+ + M ++ N++TY +++ + + A+
Sbjct: 329 ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
+ D M+ G PD + F +++ A +D+GLE+F M +
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM-----------------SL 431
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVA 236
G + V V+ G C++ G E+ K + ++++S +
Sbjct: 432 RGVIANTVTYNTLVQ----------------GFCQS-GKLEVAKKLFQEMVSRRVRPDIV 474
Query: 237 GYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVN 283
Y +LL + + GE E + +I + + ++G ++ I G+ N
Sbjct: 475 SYKILLDGL-CDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCN 520
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 104/227 (45%), Gaps = 11/227 (4%)
Query: 24 HKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISY 83
HK P +TL++++ G ++ A L + N +++ KSG +
Sbjct: 189 HK--PTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 84 AENVFNRMPEKN----SVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILS 139
A + +M E+N +V Y+ ++ + G A L++ M G K D + + ++
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 140 ACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDG-- 197
AG D+G ++ M+K KI P+ + + D + G++ EA + +K++ + G
Sbjct: 307 GFCNAGRWDDGAKLLRDMIK-RKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIA 365
Query: 198 -NVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLS 243
N + I G CK + E ++V + ++S + + +++L++
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMV-DLMISKGCDPDIMTFNILIN 411
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
MI Y +K ++ +++P+ VT + +L + + ++ F ++
Sbjct: 704 MINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLL---KNKPERNLSREMKAFDVK-- 758
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPE----KNSVTYTTMMMSYGQHGMGRRAL 116
+V+ T L+D K G + A+ +F++M E ++ YT ++ + G + A
Sbjct: 759 --PDVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAK 816
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPS 166
++D M+ SG+KPD V + A+++ C G V + +++ + M++ IKP+
Sbjct: 817 MIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLE-KGIKPT 865
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 8/108 (7%)
Query: 94 KNSVTYTTMMMSY----GQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDE 149
K V Y T+++ + G G +R ++D M+ SG+ PDA + A+++ C G + E
Sbjct: 758 KPDVFYYTVLIDWQCKIGDLGEAKR---IFDQMIESGVDPDAAPYTALIACCCKMGYLKE 814
Query: 150 GLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDG 197
IF+ M++ +KP Y + R G V++A + VK++ E G
Sbjct: 815 AKMIFDRMIE-SGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEMLEKG 861
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 58 RHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK----NSVTYTTMMMSYGQHGMGR 113
+H +D +VY +A+++ + K+ I A +VFN+M +K N V ++++ Y Q G
Sbjct: 319 KHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFS 378
Query: 114 RALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHY--- 170
A L+ + I D V + A G V+E +E+F M I P +Y
Sbjct: 379 EAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTG-KGIAPDVINYTTL 437
Query: 171 ---CCVADMLGRVGRVVEAYEFVKQLGEDGNVMEI 202
CC+ G+ +A++ + ++ G +I
Sbjct: 438 IGGCCLQ------GKCSDAFDLMIEMDGTGKTPDI 466
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 10/249 (4%)
Query: 26 VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAE 85
++P+ V ++++ + G A Q G ++ ++ T L+ S+ G+IS AE
Sbjct: 404 LLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAE 463
Query: 86 NVFNRMPEK----NSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSAC 141
+VF M + + VTY +M YG+ + L D M +GI PD + ++ +
Sbjct: 464 SVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSM 523
Query: 142 SYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAY---EFVKQLGEDGN 198
G +DE EI +++ PST + V + G EA+ ++ L +
Sbjct: 524 VVRGYIDEANEIISELIR-RGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPD 582
Query: 199 VMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRV 258
V+ + G CK E V+ KLL + V Y+ L+ Y G+ E +
Sbjct: 583 VVTCSALLHGYCKAQ-RMEKAIVLFNKLLDAGLKPDVVLYNTLIHG-YCSVGDIEKACEL 640
Query: 259 RNQITEKGL 267
+ ++G+
Sbjct: 641 IGLMVQRGM 649
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 107/249 (42%), Gaps = 10/249 (4%)
Query: 26 VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAE 85
++P+ V ++++ + G A Q G ++ ++ T L+ S+ G+IS AE
Sbjct: 404 LLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAE 463
Query: 86 NVFNRMPEK----NSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSAC 141
+VF M + + VTY +M YG+ + L D M +GI PD + ++ +
Sbjct: 464 SVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSM 523
Query: 142 SYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAY---EFVKQLGEDGN 198
G +DE EI +++ PST + V + G EA+ ++ L +
Sbjct: 524 VVRGYIDEANEIISELIR-RGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPD 582
Query: 199 VMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRV 258
V+ + G CK E V+ KLL + V Y+ L+ Y G+ E +
Sbjct: 583 VVTCSALLHGYCKAQ-RMEKAIVLFNKLLDAGLKPDVVLYNTLIHG-YCSVGDIEKACEL 640
Query: 259 RNQITEKGL 267
+ ++G+
Sbjct: 641 IGLMVQRGM 649
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 125/302 (41%), Gaps = 45/302 (14%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+G ++A + L E + + P+ T S ++ + + A Q R+
Sbjct: 546 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 605
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKN----SVTYTTMMMSYGQHGMGRRAL 116
M +VY + ++D K+ + F+ M KN +V Y ++ +Y + G AL
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
L + M GI P++ + +++ S V+E +FE M ++ ++P+ HY + D
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDG 724
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVA 236
G++G++V+ ++++ S
Sbjct: 725 YGKLGQMVKVECLLREMH---------------------------------SKNVHPNKI 751
Query: 237 GYHVLLSNIYAEEGEWENVDRVRNQITEKGL------HKEMGCSLVEIGGLVNYFVSRDE 290
Y V++ YA +G R+ N++ EKG+ +KE ++ GG++ F DE
Sbjct: 752 TYTVMIGG-YARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Query: 291 KH 292
++
Sbjct: 811 EN 812
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/302 (20%), Positives = 125/302 (41%), Gaps = 45/302 (14%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I+G ++A + L E + + P+ T S ++ + + A Q R+
Sbjct: 546 LISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNG 605
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKN----SVTYTTMMMSYGQHGMGRRAL 116
M +VY + ++D K+ + F+ M KN +V Y ++ +Y + G AL
Sbjct: 606 MLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMAL 665
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
L + M GI P++ + +++ S V+E +FE M ++ ++P+ HY + D
Sbjct: 666 ELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEM-RMEGLEPNVFHYTALIDG 724
Query: 177 LGRVGRVVEAYEFVKQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVA 236
G++G++V+ ++++ S
Sbjct: 725 YGKLGQMVKVECLLREMH---------------------------------SKNVHPNKI 751
Query: 237 GYHVLLSNIYAEEGEWENVDRVRNQITEKGL------HKEMGCSLVEIGGLVNYFVSRDE 290
Y V++ YA +G R+ N++ EKG+ +KE ++ GG++ F DE
Sbjct: 752 TYTVMIGG-YARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 810
Query: 291 KH 292
++
Sbjct: 811 EN 812
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 8/201 (3%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G + EKA+ L E L V N T + I+ +S G A +
Sbjct: 630 LINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEG 689
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMP----EKNSVTYTTMMMSYGQHGMGRRAL 116
+D +++ AL+ KSG + A V M +NS Y ++ + + G A
Sbjct: 690 LDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAA 749
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
L M + G+KPD + + +SACS AG ++ + E M + +KP+ + Y +
Sbjct: 750 DLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEAL-GVKPNIKTYTTLIKG 808
Query: 177 LGRVG---RVVEAYEFVKQLG 194
R + + YE +K +G
Sbjct: 809 WARASLPEKALSCYEEMKAMG 829
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 67/131 (51%), Gaps = 8/131 (6%)
Query: 71 LVDTYSKSGAISYAENVFNRMPEK----NSVTYTTMMMSYGQHGMGRRALTLYDSMLRSG 126
L++ Y+K G IS A V M E+ N TY+ M+ + + A +++ M++ G
Sbjct: 490 LINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEG 549
Query: 127 IKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVG---RV 183
+KPD + + I+SA G +D ++ + M K+ + +P+T + + + G R
Sbjct: 550 MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKL-RHRPTTRTFMPIIHGYAKSGDMRRS 608
Query: 184 VEAYEFVKQLG 194
+E ++ +++ G
Sbjct: 609 LEVFDMMRRCG 619
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 85/177 (48%), Gaps = 6/177 (3%)
Query: 98 TYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESM 157
T+ ++ Y + G RR+L ++D M R G P F +++ +++ +EI + M
Sbjct: 591 TFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM 650
Query: 158 VKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDGNVMEIWG--SILGACKNHGY 215
+ + + Y + VG +A+E+ +L +G ++I+ ++L AC G
Sbjct: 651 T-LAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGR 709
Query: 216 FELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGE-WENVDRVRNQITEKGLHKEM 271
+ V +++ + + Y++L+ +A G+ WE D ++ Q+ ++G+ ++
Sbjct: 710 MQSALAVTKEMSARNIPRNSFVYNILIDG-WARRGDVWEAADLIQ-QMKKEGVKPDI 764
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 7/140 (5%)
Query: 58 RHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK----NSVTYTTMMMSYGQHGMGR 113
R F D V + + L++T+ ++ A +F M +K N VTYT+++ ++ + G
Sbjct: 320 RGFCD--VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSS 377
Query: 114 RALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCV 173
A L D M G+ PD + + IL +G VD+ +F M++ H+I P Y +
Sbjct: 378 VAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIE-HEITPDAISYNSL 436
Query: 174 ADMLGRVGRVVEAYEFVKQL 193
L R GRV EA + + +
Sbjct: 437 ISGLCRSGRVTEAIKLFEDM 456
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 64 NVYAGTALVDTYSKSGAISYAENVF----NRMPEKNSVTYTTMMMSYGQHGMGRRALTLY 119
+++A +D + + +A F R E + V+YT ++ + G A+ ++
Sbjct: 113 DIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIW 172
Query: 120 DSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGR 179
++M+RSG+ PD A A++ +A VD E+ +K ++K ST Y + +
Sbjct: 173 NAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCK 232
Query: 180 VGRVVEA 186
GR+ +A
Sbjct: 233 AGRIEKA 239
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/311 (20%), Positives = 126/311 (40%), Gaps = 43/311 (13%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
++ G + G ++AI L + PN +T + IL + STG A +L +R
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMP----EKNSVTYTTMMMSYGQHGMGRRAL 116
+V L++ + G + A ++ +MP + NS++Y ++ + + RA+
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESM------------------- 157
+ M+ G PD V + +L+A G V++ +EI +
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 158 ---------------VKIHKIKPSTEHYCCVADMLGRVGRVVEAYEF---VKQLGEDGNV 199
++ +KP T Y + L R G+V EA +F +++G N
Sbjct: 460 AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNA 519
Query: 200 MEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAEEGEWENVDRVR 259
+ +LG CK+ + +++ + Y +L+ + A EG + +
Sbjct: 520 VTFNSIMLGLCKSRQTDRAIDFLVF-MINRGCKPNETSYTILIEGL-AYEGMAKEALELL 577
Query: 260 NQITEKGLHKE 270
N++ KGL K+
Sbjct: 578 NELCNKGLMKK 588
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 94/219 (42%), Gaps = 5/219 (2%)
Query: 12 EKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTAL 71
E+ L + H +P+ + ++++ G A ++ +V +
Sbjct: 119 EEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVM 178
Query: 72 VDTYSKSGAISYAENVFNRMP-EKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPD 130
+ Y K+G I+ A +V +RM + VTY T++ S G ++A+ + D ML+ PD
Sbjct: 179 ISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPD 238
Query: 131 AVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFV 190
+ + ++ A V +++ + M + P Y + + + + GR+ EA +F+
Sbjct: 239 VITYTILIEATCRDSGVGHAMKLLDEM-RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFL 297
Query: 191 KQLGEDG---NVMEIWGSILGACKNHGYFELGKVVAEKL 226
+ G NV+ + C + + K++A+ L
Sbjct: 298 NDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADML 336
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/276 (20%), Positives = 113/276 (40%), Gaps = 8/276 (2%)
Query: 12 EKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTAL 71
++A+ L L P+ +T + ++ A + A +L +V L
Sbjct: 221 KQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVL 280
Query: 72 VDTYSKSGAISYAENVFNRMP----EKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGI 127
V+ K G + A N MP + N +T+ ++ S G A L MLR G
Sbjct: 281 VNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGF 340
Query: 128 KPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAY 187
P V F +++ GL+ ++I E M + H +P++ Y + + ++ A
Sbjct: 341 SPSVVTFNILINFLCRKGLLGRAIDILEKMPQ-HGCQPNSLSYNPLLHGFCKEKKMDRAI 399
Query: 188 EFVKQLGEDGNVMEI--WGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNI 245
E+++++ G +I + ++L A G E + +L S + Y+ ++ +
Sbjct: 400 EYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGL 459
Query: 246 YAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGL 281
A+ G+ ++ +++ K L + +GGL
Sbjct: 460 -AKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 105/238 (44%), Gaps = 10/238 (4%)
Query: 20 EALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSG 79
E + + PN T +S++ G + A Q+ +V A T+L++ + K
Sbjct: 272 EMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCK 331
Query: 80 AISYAENVFNRMPEK----NSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFV 135
+ A +F M +K N++TYTT++ +GQ G A ++ M+ G+ P+ +
Sbjct: 332 KVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYN 391
Query: 136 AILSACSYAGLVDEGLEIFESMVK--IHKIKPSTEHYCCVADML---GRVGRVVEAYEFV 190
+L Y G V + L IFE M K + + P+ Y + L G++ + + +E +
Sbjct: 392 VLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM 451
Query: 191 KQLGEDGNVMEIWGSILGACKNHGYFELGKVVAEKLLSMETEKRVAGYHVLLSNIYAE 248
++ D ++ I G CK G + + L S + V Y ++S ++ E
Sbjct: 452 RKREMDIGIITYTIIIQGMCK-AGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFRE 508
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 87/191 (45%), Gaps = 8/191 (4%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
P+ VT +S++ + A + + + +V T ++D+ K+G ++YA ++
Sbjct: 140 PDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSL 199
Query: 88 FNRMP----EKNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSY 143
F++M + V YT+++ G R A +L M + IKPD + F A++ A
Sbjct: 200 FDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK 259
Query: 144 AGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD---MLGRVGRVVEAYEFVKQLGEDGNVM 200
G + E++ M+++ I P+ Y + + M G V + + ++ G +V+
Sbjct: 260 EGKFLDAEELYNEMIRM-SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318
Query: 201 EIWGSILGACK 211
I G CK
Sbjct: 319 AYTSLINGFCK 329
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 79/164 (48%), Gaps = 6/164 (3%)
Query: 35 SILPACSSTGSIAF-ATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPE 93
++L C S + A+ G ++ + ++ T+L++ + + A ++ N+M E
Sbjct: 111 NLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 94 ----KNSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDE 149
+ V YTT++ S ++G AL+L+D M GI+PD V + ++++ +G +
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 150 GLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQL 193
+ M K KIKP + + D + G+ ++A E ++
Sbjct: 231 ADSLLRGMTK-RKIKPDVITFNALIDAFVKEGKFLDAEELYNEM 273
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/201 (22%), Positives = 85/201 (42%), Gaps = 5/201 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I +NG A+ + + + P+ V +S++ ++G A L +
Sbjct: 183 IIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRK 242
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMPE----KNSVTYTTMMMSYGQHGMGRRAL 116
+ +V AL+D + K G AE ++N M N TYT+++ + G A
Sbjct: 243 IKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEAR 302
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVADM 176
++ M G PD VA+ ++++ VD+ ++IF M + + +T Y +
Sbjct: 303 QMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQ-KGLTGNTITYTTLIQG 361
Query: 177 LGRVGRVVEAYEFVKQLGEDG 197
G+VG+ A E + G
Sbjct: 362 FGQVGKPNVAQEVFSHMVSRG 382
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 8/191 (4%)
Query: 28 PNAVTLSSILPACSSTGSIAFATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENV 87
P+ VT S+L I A L ++ + NV L+D K+G ++ A +
Sbjct: 139 PSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALEL 198
Query: 88 FNRMPEK----NSVTYTTMMMSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSY 143
N M +K + VTY T++ G A + M++ I PD V F A++
Sbjct: 199 LNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVK 258
Query: 144 AGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEA---YEFVKQLGEDGNVM 200
G +DE E+++ M++ + P+ Y + + L GR+ +A ++ + G NV+
Sbjct: 259 QGNLDEAQELYKEMIQ-SSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVV 317
Query: 201 EIWGSILGACK 211
I G CK
Sbjct: 318 TYNTLISGFCK 328
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 78/161 (48%), Gaps = 4/161 (2%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I G +NG A+ L E + + VT +++L +G + A ++ ++
Sbjct: 182 LIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRS 241
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRM----PEKNSVTYTTMMMSYGQHGMGRRAL 116
++ +V TAL+D + K G + A+ ++ M + N+VTY +++ HG A
Sbjct: 242 INPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAK 301
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESM 157
+D M G P+ V + ++S +VDEG+++F+ M
Sbjct: 302 KTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRM 342
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 94/233 (40%), Gaps = 40/233 (17%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I +G E A L + L PN TLSS++ C G+ A L IR F
Sbjct: 287 LINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGF 346
Query: 61 -MDQNVYAGTALVDTYSKSGAISYAENVFNRMPE----KNSVTYTTMMMSYGQHGMGRRA 115
+ NV A LV + G I A +VF+ M E N TY +++ + + G A
Sbjct: 347 GLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGA 406
Query: 116 LTLYDSMLRSGIKPDAVAFVAILSA-CSY------------------------------- 143
+ +++ ML SG P+ V + ++ A C +
Sbjct: 407 VYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 466
Query: 144 ---AGLVDEGLEIFESMVKIHKIKPSTEHYCCVADMLGRVGRVVEAYEFVKQL 193
AG +D ++F M + H+ P+ Y + D L + R+ EAY +++
Sbjct: 467 LCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREI 519
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 124/293 (42%), Gaps = 16/293 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK-VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
++ GY + G +K + L E + K + PN+ SI+ +A A + IR
Sbjct: 287 VVNGYCRFGELDK-VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKN----SVTYTTMMMSYGQHGMGRRA 115
+ + T L+D + K G I A F M ++ +TYT ++ + Q G A
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 116 LTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD 175
L+ M G++PD+V F +++ AG + + + M++ P+ Y + D
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AGCSPNVVTYTTLID 464
Query: 176 MLGRVGRVVEAYEFVKQLGEDG---NVMEIWGSILGACKNHGYFELGKVVAEKLLSMETE 232
L + G + A E + ++ + G N+ + G CK+ E K+V E +
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 233 KRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYF 285
V + L + Y + GE + + ++ KGL ++V L+N F
Sbjct: 525 DTVT--YTTLMDAYCKSGEMDKAQEILKEMLGKGLQP----TIVTFNVLMNGF 571
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 22/225 (9%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GY + G + A + PN VT ++++ G + A +L +
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMP----EKNSVTYTTMMMSYGQHGMGRRAL 116
+ N++ ++V+ KSG I A + ++VTYTT+M +Y + G +A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEI---------------FESMVKIH 161
+ ML G++P V F +++ G++++G ++ F S+VK +
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 162 KIKPSTEHYCCV-ADMLGR-VGRVVEAYE-FVKQLGEDGNVMEIW 203
I+ + + + DM R VG + YE VK + N+ E W
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/293 (23%), Positives = 124/293 (42%), Gaps = 16/293 (5%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHK-VIPNAVTLSSILPACSSTGSIAFATQLHGFSIRH 59
++ GY + G +K + L E + K + PN+ SI+ +A A + IR
Sbjct: 287 VVNGYCRFGELDK-VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQ 345
Query: 60 FMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEKN----SVTYTTMMMSYGQHGMGRRA 115
+ + T L+D + K G I A F M ++ +TYT ++ + Q G A
Sbjct: 346 GILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405
Query: 116 LTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKIKPSTEHYCCVAD 175
L+ M G++PD+V F +++ AG + + + M++ P+ Y + D
Sbjct: 406 GKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AGCSPNVVTYTTLID 464
Query: 176 MLGRVGRVVEAYEFVKQLGEDG---NVMEIWGSILGACKNHGYFELGKVVAEKLLSMETE 232
L + G + A E + ++ + G N+ + G CK+ E K+V E +
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 233 KRVAGYHVLLSNIYAEEGEWENVDRVRNQITEKGLHKEMGCSLVEIGGLVNYF 285
V + L + Y + GE + + ++ KGL ++V L+N F
Sbjct: 525 DTVT--YTTLMDAYCKSGEMDKAQEILKEMLGKGLQP----TIVTFNVLMNGF 571
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 98/225 (43%), Gaps = 22/225 (9%)
Query: 1 MIAGYTQNGLNEKAILTLREALLHKVIPNAVTLSSILPACSSTGSIAFATQLHGFSIRHF 60
+I GY + G + A + PN VT ++++ G + A +L +
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 61 MDQNVYAGTALVDTYSKSGAISYAENVFNRMP----EKNSVTYTTMMMSYGQHGMGRRAL 116
+ N++ ++V+ KSG I A + ++VTYTT+M +Y + G +A
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 117 TLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEI---------------FESMVKIH 161
+ ML G++P V F +++ G++++G ++ F S+VK +
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 162 KIKPSTEHYCCV-ADMLGR-VGRVVEAYE-FVKQLGEDGNVMEIW 203
I+ + + + DM R VG + YE VK + N+ E W
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651
>AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:172256-174137 FORWARD
LENGTH=577
Length = 577
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Query: 48 FATQLHGFSIRHFMDQNVYAGTALVDTYSKSGAISYAENVFNRMPEK----NSVTYTTMM 103
+A Q+ GF HF T ++D + ++G I +VF+ M EK ++VTYT+++
Sbjct: 111 WAAQIKGFKHDHF------TYTTMLDIFGEAGRIQSMYSVFHLMKEKGVLIDTVTYTSLI 164
Query: 104 MSYGQHGMGRRALTLYDSMLRSGIKPDAVAFVAILSACSYAGLVDEGLEIFESMVKIHKI 163
G A+ L++ M +G +P V++ A + G V+E E+++ M++ ++
Sbjct: 165 HWVSSSGDVDGAMRLWEEMRDNGCEPTVVSYTAYMKMLFADGRVEEATEVYKEMLR-SRV 223
Query: 164 KPSTEHYCCVADMLGRVGRVVEAYEFVKQLGEDG 197
P+ Y + + L G+ EA + ++ E G
Sbjct: 224 SPNCHTYTVLMEYLVATGKCEEALDIFFKMQEIG 257