Miyakogusa Predicted Gene
- Lj2g3v3339370.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj2g3v3339370.1 Non Chatacterized Hit- tr|Q6RF54|Q6RF54_ARATH
Putative uncharacterized protein OS=Arabidopsis
thalia,60.34,0.00000000008,seg,NULL,gene.g44681.t1.1
(153 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G04790.2 | Symbols: | unknown protein; Has 35333 Blast hits ... 165 1e-41
AT2G04790.1 | Symbols: | unknown protein; Has 45 Blast hits to ... 153 4e-38
AT2G04790.4 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 101 2e-22
AT2G04790.3 | Symbols: | unknown protein; Has 35333 Blast hits ... 101 2e-22
>AT2G04790.2 | Symbols: | unknown protein; Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
- 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
chr2:1679528-1680327 FORWARD LENGTH=164
Length = 164
Score = 165 bits (417), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/146 (54%), Positives = 107/146 (73%), Gaps = 4/146 (2%)
Query: 6 DQVYVAAMPLRAAKGPPQLLMSAAYTLNIWDLQHFMVIIKPCSSP--SQVLVYDFQPIDP 63
D +YVAA+PL+AA GPPQL+MS AY+LNI +LQHFMV+IKP SSP +VLV+DFQP +P
Sbjct: 17 DTIYVAAVPLKAAAGPPQLIMSMAYSLNISNLQHFMVLIKP-SSPIRQEVLVFDFQPRNP 75
Query: 64 EDIYVALAVLSGRAVPGAXXXXXXXXXXXXXCWLVGYANSN-AVEIASEYNKIWETNLRI 122
E I A+++LSG +PG CW+VG + N A+E+A E+NK WET+LR+
Sbjct: 76 ESIEAAISLLSGNLIPGVVLQRRLKNVPRQRCWMVGPSKGNDAMEMAMEFNKSWETDLRV 135
Query: 123 GLNDCRNYTNGLVRQLTGESDVLKRL 148
G +DCR+YTN LV+ LTGE +++RL
Sbjct: 136 GFHDCRHYTNELVQHLTGEMQIVERL 161
>AT2G04790.1 | Symbols: | unknown protein; Has 45 Blast hits to 45
proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink). |
chr2:1679528-1680199 FORWARD LENGTH=152
Length = 152
Score = 153 bits (387), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/133 (56%), Positives = 98/133 (73%), Gaps = 4/133 (3%)
Query: 6 DQVYVAAMPLRAAKGPPQLLMSAAYTLNIWDLQHFMVIIKPCSSP--SQVLVYDFQPIDP 63
D +YVAA+PL+AA GPPQL+MS AY+LNI +LQHFMV+IKP SSP +VLV+DFQP +P
Sbjct: 17 DTIYVAAVPLKAAAGPPQLIMSMAYSLNISNLQHFMVLIKP-SSPIRQEVLVFDFQPRNP 75
Query: 64 EDIYVALAVLSGRAVPGAXXXXXXXXXXXXXCWLVGYANSN-AVEIASEYNKIWETNLRI 122
E I A+++LSG +PG CW+VG + N A+E+A E+NK WET+LR+
Sbjct: 76 ESIEAAISLLSGNLIPGVVLQRRLKNVPRQRCWMVGPSKGNDAMEMAMEFNKSWETDLRV 135
Query: 123 GLNDCRNYTNGLV 135
G +DCR+YTNGLV
Sbjct: 136 GFHDCRHYTNGLV 148
>AT2G04790.4 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 11 growth stages; Has 33
Blast hits to 33 proteins in 10 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr2:1679528-1680020 FORWARD LENGTH=100
Length = 100
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 64/78 (82%), Gaps = 3/78 (3%)
Query: 6 DQVYVAAMPLRAAKGPPQLLMSAAYTLNIWDLQHFMVIIKPCSSP--SQVLVYDFQPIDP 63
D +YVAA+PL+AA GPPQL+MS AY+LNI +LQHFMV+IKP SSP +VLV+DFQP +P
Sbjct: 17 DTIYVAAVPLKAAAGPPQLIMSMAYSLNISNLQHFMVLIKP-SSPIRQEVLVFDFQPRNP 75
Query: 64 EDIYVALAVLSGRAVPGA 81
E I A+++LSG +PG+
Sbjct: 76 ESIEAAISLLSGNLIPGS 93
>AT2G04790.3 | Symbols: | unknown protein; Has 35333 Blast hits
to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants -
531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink). | chr2:1679528-1680020 FORWARD LENGTH=100
Length = 100
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 64/78 (82%), Gaps = 3/78 (3%)
Query: 6 DQVYVAAMPLRAAKGPPQLLMSAAYTLNIWDLQHFMVIIKPCSSP--SQVLVYDFQPIDP 63
D +YVAA+PL+AA GPPQL+MS AY+LNI +LQHFMV+IKP SSP +VLV+DFQP +P
Sbjct: 17 DTIYVAAVPLKAAAGPPQLIMSMAYSLNISNLQHFMVLIKP-SSPIRQEVLVFDFQPRNP 75
Query: 64 EDIYVALAVLSGRAVPGA 81
E I A+++LSG +PG+
Sbjct: 76 ESIEAAISLLSGNLIPGS 93