Miyakogusa Predicted Gene

Lj2g3v3339160.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj2g3v3339160.1 Non Chatacterized Hit- tr|I1M679|I1M679_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27224
PE,85.33,0,NUP_C,Peptidase S59, nucleoporin; NUCLEOPORIN,NULL;
Nup96,Nuclear protein 96; Nucleoporin2,Peptidase,CUFF.40245.1
         (962 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G80680.1 | Symbols: SAR3, MOS3, PRE, NUP96 | SUPPRESSOR OF AU...  1185   0.0  
AT1G10390.2 | Symbols:  | Nucleoporin autopeptidase | chr1:34072...   172   9e-43
AT1G10390.1 | Symbols:  | Nucleoporin autopeptidase | chr1:34072...   172   9e-43
AT1G59660.1 | Symbols:  | Nucleoporin autopeptidase | chr1:21924...   138   1e-32

>AT1G80680.1 | Symbols: SAR3, MOS3, PRE, NUP96 | SUPPRESSOR OF AUXIN
           RESISTANCE 3 | chr1:30324219-30328489 FORWARD
           LENGTH=1046
          Length = 1046

 Score = 1185 bits (3066), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 588/980 (60%), Positives = 729/980 (74%), Gaps = 41/980 (4%)

Query: 14  LHSCKKRRVSECCVMTGIEA----------SLPVLLSPGYYTKPSLKELRARELVDPGYC 63
           L S KKRR+S    + GI A          SLP+L SP Y+ KP + EL  RE+  P YC
Sbjct: 19  LDSRKKRRIS----LDGIAALCEHSKEIIDSLPMLNSPDYFLKPCINELVEREIESPDYC 74

Query: 64  SRVPDFTVGRFGYGFVRFLSETDVRGLGLDEIVEFHRHEVVVYGDENDKPEVGEGLNKAA 123
           SRVPDFT+GR GYG++RFL  TDVR L LD IV+FHRHEV+VY DE+ KP VGEGLNKAA
Sbjct: 75  SRVPDFTIGRIGYGYIRFLGNTDVRRLDLDHIVKFHRHEVIVYDDESSKPVVGEGLNKAA 134

Query: 124 EVVLVLDSGMLKSREWGE---DVLVKKLKQIAERQGAKFVSFDAVTGEWKFMVQHFSRFG 180
           EV LV++   +    WG+   + +  KLKQ  ERQGA F+SFD   G WKF V HFSRFG
Sbjct: 135 EVTLVVN---IPDLTWGKQQVNHIAYKLKQSTERQGATFISFDPDNGLWKFFVPHFSRFG 191

Query: 181 FGDDDEEDIVMNDA------------EIYDAEKESPIDTDGLELSHSLPAHLRLDPVKMK 228
             DD+ EDI M+DA            ++ D ++E  ++T  LELSHSLPAHL LDP KMK
Sbjct: 192 LSDDEAEDIAMDDAPGLGDPVGLDGKKVADIDEEDQMETSELELSHSLPAHLGLDPEKMK 251

Query: 229 EMRLLMFHDEEEDMEDSDQKSSS------GKEYVRPLQRSAQEVTHRSTPPTVRKTPFPL 282
           EMR+LMF +E+ED  +  ++ +S       K  VRP Q+ AQ  +H+  PP VRKTP  L
Sbjct: 252 EMRMLMFPNEDEDESEDFREQTSHLMTSLTKRNVRPSQKIAQRNSHQDPPPVVRKTPLAL 311

Query: 283 LEYKRGNFDSDSPGAILMAQQHKGMPLRTVKAQGFKLDLKHETPVSGNYAHNIVDAGLFM 342
           LEY  GN D  SPG+ILM QQ+K + +R  K  GF+LD+ H TP++ NY+ N+VDA LFM
Sbjct: 312 LEYNPGN-DKSSPGSILMVQQNKNLAVRKSKTGGFELDISHVTPLTDNYSRNVVDAALFM 370

Query: 343 GKSFRVGWGPNGVLVHSGAPVGSGGSHTLLSSVINLEKVAFDNSVRDENKKVSEELVDSA 402
           G+SFR GWGPNGVL H+G P+ S  S  +LSSVIN EK+A D  V D   KV +EL+DSA
Sbjct: 371 GRSFRAGWGPNGVLFHTGKPICSSSSQMVLSSVINKEKIAIDKVVWDRKGKVQKELIDSA 430

Query: 403 LVSPLNFHKGINHVMKEVEIGHCKLTLQKLEADRTTLSEISHQYCDVIERQLSVPGLSSS 462
             +PL+ HK +NHV +EV  G   L LQ +  DR  LS+I   Y  +IE+QL V GLS+S
Sbjct: 431 FEAPLSLHKELNHVEEEVRFGSFSLKLQNVVTDRVVLSDICRSYIGIIEKQLEVAGLSTS 490

Query: 463 ARLGLTHQVMTWELIRVLFADRRPKSPVESLGADNEEDMMQDTKEVSQDVDQEALPLMRR 522
           A+L L HQVM WELI+VLF++R+    +    +DNEED+MQD KE S  +D EALPL+RR
Sbjct: 491 AKLFLMHQVMVWELIKVLFSERQSTERLMYAASDNEEDVMQDVKEDSAKIDTEALPLIRR 550

Query: 523 AEFSYWLRESVSYHVQNQISSLNDSHYLEHIFLLLTGRQLDEAVQLAVSKGDVRLACLLS 582
           AEFS WL+ESVS+ VQ  +S LN S YLEH+F LLTGR+LD AV+LA+SKGDVRLACLLS
Sbjct: 551 AEFSCWLQESVSHRVQEDVSDLNGSSYLEHLFFLLTGRELDSAVELAISKGDVRLACLLS 610

Query: 583 QAGGSTVNRSDIARQLDVWRNKGLDFSFIEKDRLRLYELLSGNVHDALHDIKIDWRRFLG 642
           QAGGSTVNR+DI +QL +WR  GLDF+FIEK+R++LYELL+GN+HDAL D  IDW+RFLG
Sbjct: 611 QAGGSTVNRNDILQQLHLWRRNGLDFNFIEKERIKLYELLAGNIHDALQDFTIDWKRFLG 670

Query: 643 LLTWYKLPPDTSLSITFQTYKHFLDEGAAPYPVPLFIDEGTPEEAVSWKADKHFDISFYL 702
           LL W+ LPPD+SL I F++Y+  L++  AP+PVP++IDEG  +  VS   +KH DI +YL
Sbjct: 671 LLMWHHLPPDSSLPIIFRSYQLLLNQAKAPWPVPIYIDEGPADGFVS--DNKHSDILYYL 728

Query: 703 MLLHASEEKEFSSLKAMFSAFSSTPDPLDYHMIWHQREVLEAVGVISSNDLHILDMGFVS 762
           MLLH+ EE+EF  L+ MFSAFSST DPLDYHMIWH R +LEAVG  +S+DLH LDMGFV+
Sbjct: 729 MLLHSKEEEEFGFLQTMFSAFSSTDDPLDYHMIWHHRGILEAVGAFTSDDLHTLDMGFVA 788

Query: 763 QLLCLGKCHWAIYVVLHLPLREDYPYLHVNLIREILFQYCETWSSDESQYRFIEDLGIPT 822
           QLL  G CHWAIYVVLH+P RED+PYLHV +IREILFQYCETWSS ESQ +FI+DLGIP+
Sbjct: 789 QLLSQGLCHWAIYVVLHIPFREDHPYLHVTVIREILFQYCETWSSMESQRQFIKDLGIPS 848

Query: 823 EWMHEALAIYHNYNGNLSEALEQFLQCANWQKAHTIFITSVAHKLFLEDKHTEIWRIATY 882
           EWMHEALA+Y+NY+G+  +AL+QF++CANWQ+AH+IF+TSVAH LFL   H+EIWRIAT 
Sbjct: 849 EWMHEALAVYYNYHGDFVKALDQFIECANWQRAHSIFMTSVAHSLFLSANHSEIWRIATS 908

Query: 883 MEDHKSEIENWELGAGIYISFYLMRNSLQGDADAMTEMDSLQSKNAACQSFVSQLNESLA 942
           M+D KSEIENW+LGAGIY+SFYL+++SLQ DAD M E++ L S N +C++FV +LNESLA
Sbjct: 909 MDDRKSEIENWDLGAGIYMSFYLLKSSLQEDADTMVELEPLDSTNESCRNFVGRLNESLA 968

Query: 943 VWGVRLPVDARVVYSKMGGE 962
           VWG RLPV+ARV YSKM  E
Sbjct: 969 VWGDRLPVEARVAYSKMAEE 988


>AT1G10390.2 | Symbols:  | Nucleoporin autopeptidase |
            chr1:3407265-3412045 REVERSE LENGTH=1041
          Length = 1041

 Score =  172 bits (436), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 90/166 (54%), Positives = 113/166 (68%), Gaps = 6/166 (3%)

Query: 31   IEASLPVLLSPGYYTKPSLKELRARELVDPGYCSRVPDFTVGRFGYGFVRFLSETDVRGL 90
            IEA +P L    Y+T+P ++EL A+E  DPGYC RV DF VGR GYG ++F+ ETDVR L
Sbjct: 876  IEALMPKLRQSDYFTEPRIQELAAKERADPGYCRRVRDFVVGRHGYGSIKFMGETDVRRL 935

Query: 91   GLDEIVEFHRHEVVVYGDENDKPEVGEGLNKAAEVVLV----LDSGMLKSREWGEDVLVK 146
             L+ +V+F+  EV+VY DE+ KP VG+GLNK AEV L+    +D    K    GE V   
Sbjct: 936  DLESLVQFNTREVIVYMDESKKPAVGQGLNKPAEVTLLNIKCIDKKTGKQFTEGERVEKY 995

Query: 147  K--LKQIAERQGAKFVSFDAVTGEWKFMVQHFSRFGFGDDDEEDIV 190
            K  LK+ AE QGA+FVSFD V GEWKF V+HFS +  GD+DEED V
Sbjct: 996  KMMLKKKAEAQGAEFVSFDPVKGEWKFRVEHFSSYKLGDEDEEDGV 1041


>AT1G10390.1 | Symbols:  | Nucleoporin autopeptidase |
            chr1:3407265-3412045 REVERSE LENGTH=1041
          Length = 1041

 Score =  172 bits (436), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 90/166 (54%), Positives = 113/166 (68%), Gaps = 6/166 (3%)

Query: 31   IEASLPVLLSPGYYTKPSLKELRARELVDPGYCSRVPDFTVGRFGYGFVRFLSETDVRGL 90
            IEA +P L    Y+T+P ++EL A+E  DPGYC RV DF VGR GYG ++F+ ETDVR L
Sbjct: 876  IEALMPKLRQSDYFTEPRIQELAAKERADPGYCRRVRDFVVGRHGYGSIKFMGETDVRRL 935

Query: 91   GLDEIVEFHRHEVVVYGDENDKPEVGEGLNKAAEVVLV----LDSGMLKSREWGEDVLVK 146
             L+ +V+F+  EV+VY DE+ KP VG+GLNK AEV L+    +D    K    GE V   
Sbjct: 936  DLESLVQFNTREVIVYMDESKKPAVGQGLNKPAEVTLLNIKCIDKKTGKQFTEGERVEKY 995

Query: 147  K--LKQIAERQGAKFVSFDAVTGEWKFMVQHFSRFGFGDDDEEDIV 190
            K  LK+ AE QGA+FVSFD V GEWKF V+HFS +  GD+DEED V
Sbjct: 996  KMMLKKKAEAQGAEFVSFDPVKGEWKFRVEHFSSYKLGDEDEEDGV 1041


>AT1G59660.1 | Symbols:  | Nucleoporin autopeptidase |
           chr1:21924693-21929233 FORWARD LENGTH=997
          Length = 997

 Score =  138 bits (348), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 77/160 (48%), Positives = 101/160 (63%), Gaps = 6/160 (3%)

Query: 31  IEASLPVLLSPGYYTKPSLKELRARELVDPGYCSRVPDFTVGRFGYGFVRFLSETDVRGL 90
           IE+ +P L    Y+T+P ++EL A+E V+ GYC RV DF VGR GYG ++FL ETDV  L
Sbjct: 835 IESLMPKLHHSEYFTEPRIQELAAKERVEQGYCKRVKDFVVGRHGYGSIKFLGETDVCRL 894

Query: 91  GLDEIVEFHRHEVVVYGDENDKPEVGEGLNKAAEVVLV----LDSGMLKSREWGE--DVL 144
            L+ +V+F   EV VY DE+ KP VG+GLNK A V L+    +D         GE  D  
Sbjct: 895 DLEMVVQFKNREVNVYMDESKKPPVGQGLNKPAVVTLLNIKCMDKKTGTQVMEGERLDKY 954

Query: 145 VKKLKQIAERQGAKFVSFDAVTGEWKFMVQHFSRFGFGDD 184
            + LK+ A  QGA+FVS+D V GEW F V+HFS +  GD+
Sbjct: 955 KEMLKRKAGEQGAQFVSYDPVNGEWTFKVEHFSSYKLGDE 994